BioTop

acquired abnormal structure^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AcquiredAbnormalStructure

has super-classes

pathological structure^c

is disjoint with

congenital abnormal structure^c

acquired pathological condition^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AcquiredPathologicalCondition

has super-classes

pathological value region^c

is disjoint with

congenital pathological condition^c

acquired pathological static processual entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AcquiredPathologicalStaticProcessualEntity

Previous version:

acquired pathological state

is equivalent to

pathological static processual entity^c and (is bearer of some canonicity and (projects onto some acquired pathological condition^c))

action on biological system^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ActionOnBiologicalSystem

has super-classes

action

has patient some living organism^c or (proper physical part of^op some living organism^c)

has sub-classes

hurting^c, poisoning^c

adult organism^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AdultOrganism

is equivalent to

living organism^c and (is bearer of some developmental quality^c and (projects onto some adult value region^c))

has super-classes

organism by developmental stage partition^c

is disjoint with

embryonic organism^c, juvenile organism^c

adult value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AdultValueRegion

has super-classes

developmental value region^c

is disjoint with

embryonic value region^c, juvenile value region^c

affecting^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Affecting

has super-classes

action

has sub-classes

causing^c, complicating^c, disrupting^c, indicating^c, interacting^c, managing care^c, producing^c, treating^c, treating condition^c, treating organism^c

age quality^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AgeQuality

has super-classes

object quality

(inheres in some immaterial object^c or material object^c) and (inheres in only immaterial object^c or material object^c)

alga^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Alga

has super-classes

eukaryote^c

is disjoint with

animal including human^c, plant^c, protist^c, animal including human^c, fungus^c, plant^c, protist^c

alpha particle^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AlphaParticle

has super-classes

atom

(not (has proper physical part^op some electron^c)) and (has proper physical part^op some neutron^c)

amino acid molecule or residue^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AminoAcidMoleculeOrResidue

has super-classes

amino acid or peptide molecule or structure^c

monomer^c

has component part some submolecular group^c

is disjoint with

peptide structure^c

amino acid or peptide molecule or structure^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AminoAcidOrPeptideMoleculeOrStructure

has super-classes

organic molecular entity partition^c

has sub-classes

amino acid molecule or residue^c, peptide structure^c

is disjoint with

carbohydrate molecule or residue^c, fatty acid molecule or residue^c, heterocyclic base molecule or residue^c, lipid molecule or residue^c, nucleic acid nucleotide or nucleoside molecule or residue^c

amino acid sequence^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AminoAcidSequence

is equivalent to

(has component part some amino acid molecule or residue^c) and (has component part only amino acid molecule or residue^c)

has super-classes

peptide structure^c

amino acid sequence information^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AminoAcidSequenceInformation

has super-classes

sequence information^c

amount of body substance^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AmountOfBodySubstance

has super-classes

compound of collective material entities

amphibian^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Amphibian

has super-classes

vertebrate^c

is disjoint with

bird^c, fish^c, mammal^c, reptile^c

analyzing^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Analyzing

has super-classes

human action^c

animal cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AnimalCell

is equivalent to

cell and (is bearer of some taxon quality^c and (projects onto some kingdom animalia value region^c))

is disjoint with

bacterial cell^c, plant cell^c

animal excluding human^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AnimalExcludingHuman

is equivalent to

animal including human^c and (not (human^c))

animal including human^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AnimalIncludingHuman

has super-classes

eukaryote^c

is bearer of some taxon quality^c and (projects onto some kingdom animalia value region^c) and (projects onto only kingdom animalia value region^c)

has sub-classes

invertebrate^c, vertebrate^c

is disjoint with

alga^c, plant^c, protist^c, alga^c, fungus^c, plant^c, protist^c

animal language^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AnimalLanguage

has super-classes

language partition^c

is disjoint with

human language^c, machine language^c

animal population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AnimalPopulation

is equivalent to

population^c and (has granular part some animal including human^c) and (has granular part only animal including human^c)

antibiotic role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#AntibioticRole

has super-classes

drug role^c

archaebacterial cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ArchaebacterialCell

has super-classes

prokaryote^c

is bearer of some taxon quality^c and (projects onto only kingdom archaea value region^c)

artefact role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ArtefactRole

has super-classes

role

is disjoint with

biological system role^c, chemical role^c, family role^c, health related role^c, occupational role^c, spatial reference role^c

arthropod^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Arthropod

has super-classes

invertebrate^c

is bearer of some taxon quality^c and (projects onto some phylum arthropoda value region^c)

has sub-classes

insect^c

arthropod population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ArthropodPopulation

is equivalent to

population^c and (has granular part some arthropod^c) and (has granular part only arthropod^c)

bacteria population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BacteriaPopulation

is equivalent to

population^c and (has granular part some bacterial cell^c) and (has granular part only bacterial cell^c)

bacterial cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BacterialCell

is equivalent to

cell and (is bearer of some taxon quality^c and (projects onto some kingdom bacteria value region^c))

has super-classes

prokaryote^c

is bearer of some taxon quality^c and (projects onto some kingdom bacteria value region^c)

has sub-classes

escherichia coli cell^c

is disjoint with

animal cell^c, plant cell^c

bacterial colony^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BacterialColony

is equivalent to

biological colony^c and (has granular part some bacterial cell^c) and (has granular part only bacterial cell^c)

bakers yeast cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BakersYeastCell

has super-classes

yeast cell^c

is bearer of some taxon quality^c and (projects onto some species saccharomyces cerevisiae value region^c)

is disjoint with

candida albicans cell^c

bakers yeast population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BakersYeastPopulation

is equivalent to

population^c and (has granular part some bakers yeast cell^c) and (has granular part only bakers yeast cell^c)

behavior^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Behavior

has super-classes

action

bio molecular process^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BioMolecularProcess

has super-classes

biological processual entity^c

bio molecular sequence information^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BioMolecularSequenceInformation

has super-classes

sequence information^c

bio molecular sequence structure^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BioMolecularSequenceStructure

is equivalent to

amino acid sequence^c or chain of carbohydrate monomers^c or chain of nucleotide monomers^c or DNA chain^c or RNA chain^c

has super-classes

organic molecular entity^c

biological action^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BiologicalAction

is equivalent to

has agent some structured biological entity or (has granular part some structured biological entity)

has super-classes

action

has sub-classes

organism action^c

biological boundary^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BiologicalBoundary

is equivalent to

is boundary of some biological space^c or structured biological entity

has super-classes

one dimensional physical entity

biological colony^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BiologicalColony

has super-classes

plurality of organisms

biological function^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BiologicalFunction

is equivalent to

function and (inheres in some structured biological entity)

biological life^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BiologicalLife

has super-classes

organism process^c

biological processual entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BiologicalProcessualEntity

is equivalent to

process^c and (has participant some structured biological entity) and (is included in some structured biological entity)

has sub-classes

bio molecular process^c

is disjoint with

physical processual entity^c

biological size^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BiologicalSize

has super-classes

object quality

projects onto some biological size value region^c

projects onto only biological size value region^c

biological size value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BiologicalSizeValueRegion

has super-classes

value region

has sub-classes

macroscopic value region^c, microscopic value region^c

biological space^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BiologicalSpace

is equivalent to

immaterial three dimensional physical entity and (physically contained in^op some structured biological entity)

biological system role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BiologicalSystemRole

has super-classes

role

has sub-classes

immunologic role^c, signalling role^c, vitamin role^c

is disjoint with

artefact role^c, chemical role^c, family role^c, health related role^c, occupational role^c, spatial reference role^c

biomedical material role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BiomedicalMaterialRole

has super-classes

therapeutic role^c

is disjoint with

drug role^c

biomolecule^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Biomolecule

is equivalent to

mono molecular entity and (originates from^op some living organism^c)

bird^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Bird

has super-classes

vertebrate^c

is disjoint with

amphibian^c, fish^c, mammal^c, reptile^c

body^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Body

has super-classes

structured biological entity

has sub-classes

dead body^c, living body^c

body liquid^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BodyLiquid

has super-classes

portion of heterogenous liquid^c

has component part some has granular part some water molecule^c

originates from^op some living organism^c

body system^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#BodySystem

has super-classes

organism part

has sub-classes

organ system^c, organ system part^c

is disjoint with

organ^c, organ^c, organ part^c

candida albicans cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CandidaAlbicansCell

has super-classes

yeast cell^c

is bearer of some taxon quality^c and (projects onto some species candida albicans value region^c)

is disjoint with

bakers yeast cell^c

candida albicans population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CandidaAlbicansPopulation

is equivalent to

population^c and (has granular part some candida albicans cell^c) and (has granular part only candida albicans cell^c)

canonical processual entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CanonicalProcessualEntity

is equivalent to

process^c and (is bearer of some canonicity and (projects onto some canonical value region^c))

is disjoint with

noncanonical processual entity^c

canonical static processual entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CanonicalStaticProcessualEntity

Previous version:

canonical state

is equivalent to

static processual entity^c and (is bearer of some canonicity and (projects onto some canonical value region^c))

is disjoint with

noncanonical static processual entity^c

canonical value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/btl2.owl#CanonicalValueRegion

is disjoint with

noncanonical value region^c

carbohydrate molecule or residue^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CarbohydrateMoleculeOrResidue

has super-classes

organic molecular entity partition^c

has sub-classes

carbohydrate monomer^c, chain of carbohydrate monomers^c

is disjoint with

amino acid or peptide molecule or structure^c, fatty acid molecule or residue^c, heterocyclic base molecule or residue^c, lipid molecule or residue^c, nucleic acid nucleotide or nucleoside molecule or residue^c

carbohydrate monomer^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CarbohydrateMonomer

has super-classes

carbohydrate molecule or residue^c

monomer^c

has component part some submolecular group^c

has sub-classes

entire carbohydrate monomer^c

is disjoint with

chain of carbohydrate monomers^c

carbohydrate sequence information^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CarbohydrateSequenceInformation

has super-classes

sequence information^c

catalytic role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CatalyticRole

has super-classes

chemical role^c

is disjoint with

indicator role^c, reagent role^c

categorization system^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CategorizationSystem

has super-classes

intellectual product^c

is disjoint with

regulation or law^c

causing^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Causing

has super-classes

affecting^c

cell in vivo^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CellInVivo

has super-classes

cell

living organism^c or (proper physical part of^op some living organism^c)

is disjoint with

modified cell^c

cell membrane^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CellMembrane

has super-classes

cellular component^c

has component part some has granular part some peptide structure^c

has component part some has granular part some lipid molecule or residue^c

is disjoint with

cell nucleus^c, cytoplasm^c, genome^c

cell nucleus^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CellNucleus

has super-classes

cellular component^c

is disjoint with

cell membrane^c, cytoplasm^c, genome^c

cellular component^c back to ToC or Class ToC

IRI: http://purl.org/biotop/btl2.owl#CellularComponent

has super-classes

originates from^op some cell

has sub-classes

cell membrane^c, cell nucleus^c, cytoplasm^c, genome^c

is disjoint with

organism part^c, syncytium^c

central nervous system^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CentralNervousSystem

has super-classes

organ system^c

chain of carbohydrate monomers^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ChainOfCarbohydrateMonomers

has super-classes

carbohydrate molecule or residue^c

has component part some carbohydrate monomer^c

is disjoint with

carbohydrate monomer^c

chain of nucleotide monomers^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ChainOfNucleotideMonomers

has super-classes

nucleic acid structure^c

has sub-classes

DNA chain^c, RNA chain^c

chemical role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ChemicalRole

has super-classes

role

has sub-classes

catalytic role^c, indicator role^c, reagent role^c

is disjoint with

artefact role^c, biological system role^c, family role^c, health related role^c, occupational role^c, spatial reference role^c

child role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ChildRole

has super-classes

family role^c

is disjoint with

parent role^c, sibling role^c

chlamydia cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ChlamydiaCell

has super-classes

prokaryote^c

is disjoint with

rickettsia cell^c

chromosome^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Chromosome

has super-classes

molecule complex^c

has component part some entire nucleic acid molecule^c

class gamma proteobacteria value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ClassGammaProteobacteriaValueRegion

has super-classes

phylum proteobacteria value region^c

has sub-classes

order enterobacteriales value region^c

class insecta value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ClassInsectaValueRegion

has super-classes

phylum arthropoda value region^c

has sub-classes

order diptera value region^c

class mammalia value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ClassMammaliaValueRegion

has super-classes

subphylum vertebrata value region^c

has sub-classes

order primates value region^c

class saccharomycetes value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ClassSaccharomycetesValueRegion

has super-classes

subphylum saccharomycotina value region^c

has sub-classes

order saccharomycetales value region^c

complicating^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Complicating

has super-classes

affecting^c

congenital abnormal structure^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CongenitalAbnormalStructure

has super-classes

pathological structure^c

is disjoint with

acquired abnormal structure^c

congenital pathological condition^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CongenitalPathologicalCondition

has super-classes

pathological value region^c

is disjoint with

acquired pathological condition^c

congenital pathological static processual entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#CongenitalPathologicalStaticProcessualEntity

Previous version:

congenital pathological state

is equivalent to

pathological static processual entity^c and (is bearer of some canonicity and (projects onto some congenital pathological condition^c))

cytoplasm^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Cytoplasm

has super-classes

cellular component^c

has proper physical part^op some has granular part some peptide structure^c

has proper physical part^op some has granular part some water molecule^c

is disjoint with

cell membrane^c, cell nucleus^c, genome^c

dead body^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#DeadBody

has super-classes

body^c

is disjoint with

living body^c

death^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Death

has super-classes

biological processual entity^c and (not (has duration^op some time interval^c)) and (has point in time^op some point in time^c)

developmental quality^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#DevelopmentalQuality

has super-classes

object quality

projects onto only developmental value region^c

projects onto some developmental value region^c

developmental value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#DevelopmentalValueRegion

has super-classes

value region

has sub-classes

adult value region^c, embryonic value region^c, juvenile value region^c

digital entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#DigitalEntity

has super-classes

information object

disrupting^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Disrupting

has super-classes

affecting^c

DNA chain^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#DNAChain

has super-classes

chain of nucleotide monomers^c

is disjoint with

RNA chain^c

drug role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#DrugRole

has super-classes

therapeutic role^c

has sub-classes

antibiotic role^c

is disjoint with

biomedical material role^c

educator role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EducatorRole

has super-classes

occupational role^c

is disjoint with

health professional role^c, researcher role^c

eicosanoid^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Eicosanoid

has super-classes

lipid molecule or residue^c

is disjoint with

non steroid lipid^c, steroid^c

electron^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Electron

has super-classes

sub atomic particle

is disjoint with

neutron^c, proton^c

embryonic organism^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EmbryonicOrganism

is equivalent to

living organism^c and (is bearer of some developmental quality^c and (projects onto some embryonic value region^c))

has super-classes

organism by developmental stage partition^c

is disjoint with

adult organism^c, juvenile organism^c

embryonic structure^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EmbryonicStructure

is equivalent to

structured biological entity and (embryonic organism^c or (originates from^op some embryonic organism^c)) and (is bearer of some developmental quality^c and (projects onto some embryonic value region^c))

embryonic value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EmbryonicValueRegion

has super-classes

developmental value region^c

is disjoint with

adult value region^c, juvenile value region^c

entire carbohydrate monomer^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EntireCarbohydrateMonomer

has super-classes

carbohydrate monomer^c

entire molecular entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EntireMolecularEntity

has super-classes

mono molecular entity

has sub-classes

entire nucleic acid molecule^c

is disjoint with

molecular residue^c

entire nucleic acid molecule^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EntireNucleicAcidMolecule

has super-classes

entire molecular entity^c

has component part some monomer^c

entire protein molecule^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EntireProteinMolecule

has super-classes

peptide structure^c

has sub-classes

protein subunit^c

enzyme role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EnzymeRole

is equivalent to

catalytic role^c and (inheres in some peptide structure^c or RNA chain^c)

epithelial cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EpithelialCell

has super-classes

cell

escherichia coli cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EscherichiaColiCell

has super-classes

bacterial cell^c

is bearer of some taxon quality^c and (projects onto some species escherichia coli value region^c)

escherichia coli population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EscherichiaColiPopulation

is equivalent to

population^c and (has granular part some escherichia coli cell^c) and (has granular part only escherichia coli cell^c)

eukaryote^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Eukaryote

has super-classes

organism by taxon partition^c

has sub-classes

alga^c, animal including human^c, fungus^c, plant^c, protist^c

is disjoint with

prokaryote^c, virus^c

eukaryote population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#EukaryotePopulation

is equivalent to

population^c and (has granular part some eukaryote^c) and (has granular part only eukaryote^c)

examination result role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ExaminationResultRole

has super-classes

finding role^c

is disjoint with

sign or symptom role^c

family drosophilidae value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#FamilyDrosophilidaeValueRegion

has super-classes

order diptera value region^c

has sub-classes

subfamily drosophilinae value region^c

family enterobacteriaceaea value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#FamilyEnterobacteriaceaeaValueRegion

has super-classes

order enterobacteriales value region^c

has sub-classes

genus escherichia value region^c

family hominidae value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#FamilyHominidaeValueRegion

has super-classes

order primates value region^c

has sub-classes

genus homo value region^c

family role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#FamilyRole

has super-classes

role

inheres in only animal including human^c or animal population^c

has sub-classes

child role^c, parent role^c, sibling role^c

is disjoint with

artefact role^c, biological system role^c, chemical role^c, health related role^c, occupational role^c, spatial reference role^c

family saccharomycetaceae value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#FamilySaccharomycetaceaeValueRegion

has super-classes

order saccharomycetales value region^c

has sub-classes

genus candida value region^c, genus saccharomyces value region^c

fatty acid molecule or residue^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#FattyAcidMoleculeOrResidue

has super-classes

organic molecular entity partition^c

has component part some submolecular group^c

is disjoint with

amino acid or peptide molecule or structure^c, carbohydrate molecule or residue^c, heterocyclic base molecule or residue^c, lipid molecule or residue^c, nucleic acid nucleotide or nucleoside molecule or residue^c

finding role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#FindingRole

has super-classes

health related role^c

has sub-classes

examination result role^c, sign or symptom role^c

is disjoint with

food role^c, poison role^c, preventive role^c, therapeutic role^c, food role^c, poison role^c, preventive role^c, subject of care role^c, therapeutic role^c

fish^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Fish

has super-classes

vertebrate^c

is disjoint with

amphibian^c, bird^c, mammal^c, reptile^c

food role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#FoodRole

has super-classes

health related role^c

is disjoint with

finding role^c, poison role^c, preventive role^c, therapeutic role^c, finding role^c, poison role^c, preventive role^c, subject of care role^c, therapeutic role^c

fruit fly^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#FruitFly

has super-classes

insect^c

is bearer of some taxon quality^c and (projects onto some species drosophila melanogaster value region^c)

fruit fly population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#FruitFlyPopulation

is equivalent to

population^c and (has granular part some fruit fly^c) and (has granular part only fruit fly^c)

fungus^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Fungus

has super-classes

eukaryote^c

is bearer of some taxon quality^c and (projects onto some kingdom fungi value region^c) and (projects onto only kingdom fungi value region^c)

has sub-classes

yeast cell^c

is disjoint with

alga^c, animal including human^c, plant^c, protist^c

fungus population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#FungusPopulation

is equivalent to

population^c and (has granular part some fungus^c) and (has granular part only fungus^c)

gaseous value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GaseousValueRegion

has super-classes

state of matter value region^c

is disjoint with

liquid value region^c, solid value region^c

gene^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Gene

Current version:

TODO: Discuss whether all genes are DNA !

has super-classes

nucleic acid structure^c

is bearer of some genetic information^c

gene information^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GeneInformation

has super-classes

information object

genetic information^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GeneticInformation

has super-classes

information object and (inheres in some chain of nucleotide monomers^c or gene^c or genome^c)

genome^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Genome

has super-classes

cellular component^c

is bearer of some genetic information^c

is disjoint with

cell membrane^c, cell nucleus^c, cytoplasm^c

genome information^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GenomeInformation

has super-classes

information object

genus candida value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GenusCandidaValueRegion

has super-classes

family saccharomycetaceae value region^c

has sub-classes

species candida albicans value region^c

is disjoint with

genus saccharomyces value region^c

genus drosophila value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GenusDrosophilaValueRegion

has super-classes

subfamily drosophilinae value region^c

has sub-classes

species drosophila melanogaster value region^c

genus escherichia value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GenusEscherichiaValueRegion

has super-classes

family enterobacteriaceaea value region^c

has sub-classes

species escherichia coli value region^c

genus homo value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GenusHomoValueRegion

has super-classes

family hominidae value region^c

has sub-classes

species homo sapiens value region^c

genus saccharomyces value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GenusSaccharomycesValueRegion

has super-classes

family saccharomycetaceae value region^c

has sub-classes

species saccharomyces cerevisiae value region^c

is disjoint with

genus candida value region^c

geographic surface^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GeographicSurface

has super-classes

two dimensional physical entity

government^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Government

has super-classes

organization^c

great ape^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GreatApe

has super-classes

mammal^c

is bearer of some taxon quality^c and (projects onto some family hominidae value region^c)

has sub-classes

primate^c

great ape population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GreatApePopulation

is equivalent to

population^c and (has granular part some great ape^c) and (has granular part only great ape^c)

group interaction^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GroupInteraction

has super-classes

interacting^c

has participant only legal entity^c or (has granular part some living organism^c)

is disjoint with

organism interaction^c, substance interaction^c

growing process^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#GrowingProcess

has super-classes

tissue process^c

health professional role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#HealthProfessionalRole

has super-classes

occupational role^c

has sub-classes

nurse role^c, physician role^c

is disjoint with

educator role^c, researcher role^c

health related role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#HealthRelatedRole

has super-classes

role

has sub-classes

finding role^c, food role^c, poison role^c, preventive role^c, subject of care role^c, therapeutic role^c

is disjoint with

artefact role^c, biological system role^c, chemical role^c, family role^c, occupational role^c, spatial reference role^c

heterocyclic base molecule or residue^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#HeterocyclicBaseMoleculeOrResidue

has super-classes

organic molecular entity partition^c

has component part some submolecular group^c

is disjoint with

amino acid or peptide molecule or structure^c, carbohydrate molecule or residue^c, fatty acid molecule or residue^c, lipid molecule or residue^c, nucleic acid nucleotide or nucleoside molecule or residue^c

hormone role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#HormoneRole

has super-classes

signalling role^c

is disjoint with

neuroreactive role^c, receptor role^c

human^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Human

has super-classes

primate^c

is bearer of some taxon quality^c and (projects onto some species homo sapiens value region^c) and (projects onto only species homo sapiens value region^c)

human action^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#HumanAction

has super-classes

organism action^c

has agent some human^c or (has granular part some human^c)

has sub-classes

analyzing^c, human reasoning^c

human epithelial cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#HumanEpithelialCell

is equivalent to

epithelial cell^c and (originates from^op some is bearer of some taxon quality^c and (projects onto some species homo sapiens value region^c))

human language^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#HumanLanguage

has super-classes

language partition^c

is disjoint with

animal language^c, machine language^c

human population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#HumanPopulation

is equivalent to

population^c and (has granular part some human^c) and (has granular part only human^c)

human reasoning^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#HumanReasoning

is equivalent to

human action^c and (has agent some human^c) and (has outcome some intellectual product^c)

has super-classes

human action^c

hurting^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Hurting

has super-classes

action on biological system^c

is bearer of some physical force

immaterial object^c back to ToC or Class ToC

IRI: http://purl.org/biotop/btl2.owl#ImmaterialObject

Previous version:

immaterial physical entity

immaterial processual entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ImmaterialProcessualEntity

has super-classes

process^c

has sub-classes

membership^c

immunologic role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ImmunologicRole

has super-classes

biological system role^c

is disjoint with

signalling role^c, vitamin role^c

indicating^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Indicating

has super-classes

affecting^c

indicator role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#IndicatorRole

has super-classes

chemical role^c

is disjoint with

catalytic role^c, reagent role^c

individual behavior^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#IndividualBehavior

is equivalent to

behavior^c and (has agent some living organism^c) and (has agent only living organism^c)

is disjoint with

social behavior^c

inorganic molecular entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#InorganicMolecularEntity

has super-classes

mono molecular entity

has sub-classes

phosphate^c, water molecule^c

is disjoint with

organic molecular entity^c

insect^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Insect

has super-classes

arthropod^c

is bearer of some taxon quality^c and (projects onto some class insecta value region^c)

has sub-classes

fruit fly^c

insect population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#InsectPopulation

is equivalent to

population^c and (has granular part some insect^c) and (has granular part only insect^c)

intellectual product^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#IntellectualProduct

has super-classes

information object

is patient in some process^c and (has agent some human^c)

has sub-classes

categorization system^c, regulation or law^c

interacting^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Interacting

is equivalent to

group interaction^c or organism interaction^c or substance interaction^c

has super-classes

affecting^c

has sub-classes

group interaction^c, organism interaction^c, substance interaction^c

intra cellular process^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#IntraCellularProcess

is equivalent to

biological processual entity^c and (is included in some cell)

invertebrate^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Invertebrate

has super-classes

animal including human^c

has sub-classes

arthropod^c

is disjoint with

vertebrate^c

juvenile organism^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#JuvenileOrganism

is equivalent to

living organism^c and (is bearer of some developmental quality^c and (projects onto some juvenile value region^c))

has super-classes

organism by developmental stage partition^c

is disjoint with

adult organism^c, embryonic organism^c

juvenile value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#JuvenileValueRegion

has super-classes

developmental value region^c

is disjoint with

adult value region^c, embryonic value region^c

kingdom animalia value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#KingdomAnimaliaValueRegion

has super-classes

taxon value region

has sub-classes

phylum arthropoda value region^c, phylum chordata value region^c

is disjoint with

kingdom archaea value region^c, kingdom bacteria value region^c, kingdom chromista value region^c, kingdom fungi value region^c, kingdom plantae value region^c, kingdom protozoa value region^c, kingdom viruses value region^c

kingdom archaea value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#KingdomArchaeaValueRegion

has super-classes

taxon value region

is disjoint with

kingdom animalia value region^c, kingdom bacteria value region^c, kingdom chromista value region^c, kingdom fungi value region^c, kingdom plantae value region^c, kingdom protozoa value region^c, kingdom viruses value region^c

kingdom bacteria value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#KingdomBacteriaValueRegion

has super-classes

taxon value region

has sub-classes

phylum proteobacteria value region^c

is disjoint with

kingdom animalia value region^c, kingdom archaea value region^c, kingdom chromista value region^c, kingdom fungi value region^c, kingdom plantae value region^c, kingdom protozoa value region^c, kingdom viruses value region^c

kingdom chromista value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#KingdomChromistaValueRegion

has super-classes

taxon value region

is disjoint with

kingdom animalia value region^c, kingdom archaea value region^c, kingdom bacteria value region^c, kingdom fungi value region^c, kingdom plantae value region^c, kingdom protozoa value region^c, kingdom viruses value region^c

kingdom fungi value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#KingdomFungiValueRegion

has super-classes

taxon value region

has sub-classes

phylum ascomycota value region^c

is disjoint with

kingdom animalia value region^c, kingdom archaea value region^c, kingdom bacteria value region^c, kingdom chromista value region^c, kingdom plantae value region^c, kingdom protozoa value region^c, kingdom viruses value region^c

kingdom plantae value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#KingdomPlantaeValueRegion

has super-classes

taxon value region

is disjoint with

kingdom animalia value region^c, kingdom archaea value region^c, kingdom bacteria value region^c, kingdom chromista value region^c, kingdom fungi value region^c, kingdom protozoa value region^c, kingdom viruses value region^c

kingdom protozoa value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#KingdomProtozoaValueRegion

has super-classes

taxon value region

is disjoint with

kingdom animalia value region^c, kingdom archaea value region^c, kingdom bacteria value region^c, kingdom chromista value region^c, kingdom fungi value region^c, kingdom plantae value region^c, kingdom viruses value region^c

kingdom viruses value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#KingdomVirusesValueRegion

has super-classes

taxon value region

is disjoint with

kingdom animalia value region^c, kingdom archaea value region^c, kingdom bacteria value region^c, kingdom chromista value region^c, kingdom fungi value region^c, kingdom plantae value region^c, kingdom protozoa value region^c

language^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Language

has super-classes

information object

language partition^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#LanguagePartition

is equivalent to

language^c and (animal language^c or human language^c or machine language^c)

has sub-classes

animal language^c, human language^c, machine language^c

legal entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#LegalEntity

has super-classes

information object

has sub-classes

organization^c

lipid molecule or residue^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#LipidMoleculeOrResidue

has super-classes

organic molecular entity partition^c

has component part some submolecular group^c

has sub-classes

eicosanoid^c, non steroid lipid^c, steroid^c

is disjoint with

amino acid or peptide molecule or structure^c, carbohydrate molecule or residue^c, fatty acid molecule or residue^c, heterocyclic base molecule or residue^c, nucleic acid nucleotide or nucleoside molecule or residue^c

liquid value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#LiquidValueRegion

has super-classes

state of matter value region^c

is disjoint with

gaseous value region^c, solid value region^c

living body^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#LivingBody

has super-classes

body^c

is participant in some biological life^c

living organism^c or (proper physical part of^op some living organism^c)

is disjoint with

dead body^c

living organism^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#LivingOrganism

Previous version:

organism

has super-classes

organism

is participant in some biological life^c

has sub-classes

microorganism^c

machine action^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MachineAction

is equivalent to

action and (has agent some material object^c and (is bearer of some artefact role^c))

machine language^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MachineLanguage

has super-classes

language partition^c

is disjoint with

animal language^c, human language^c

macroscopic value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MacroscopicValueRegion

has super-classes

biological size value region^c

is disjoint with

microscopic value region^c

mammal^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Mammal

has super-classes

vertebrate^c

is bearer of some taxon quality^c and (projects onto some class mammalia value region^c)

has sub-classes

great ape^c

is disjoint with

amphibian^c, bird^c, fish^c, reptile^c

mammal population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MammalPopulation

is equivalent to

population^c and (has granular part some mammal^c) and (has granular part only mammal^c)

managing care^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ManagingCare

has super-classes

affecting^c

has participant only human^c or legal entity^c or (has granular part some human^c)

material object^c back to ToC or Class ToC

IRI: http://purl.org/biotop/btl2.owl#MaterialObject

Previous version:

material entity

has sub-classes

radiation^c

is in domain of

derived into^op, derives from^op, originates from^op

is in range of

derived into^op, derives from^op, originates from^op

measure^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Measure

has super-classes

information object

measurement method^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MeasurementMethod

is equivalent to

plan and (has realization only measuring action^c)

has super-classes

plan

measuring action^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MeasuringAction

has super-classes

action

membership^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Membership

has super-classes

immaterial processual entity^c

has agent some human^c or legal entity^c

has patient some legal entity^c

mental function^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MentalFunction

has super-classes

biological function^c and (inheres in some central nervous system^c)

mental process^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MentalProcess

has super-classes

organism process^c

microorganism^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Microorganism

is equivalent to

living organism^c and (is bearer of some projects onto some microscopic value region^c)

has super-classes

living organism^c

microscopic value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MicroscopicValueRegion

has super-classes

biological size value region^c

is disjoint with

macroscopic value region^c

mind^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Mind

has super-classes

information object

modified cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ModifiedCell

has super-classes

cell

not (proper physical part of^op some living organism^c)

derives from^op some cell in vivo^c

is disjoint with

cell in vivo^c

molecular function^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MolecularFunction

has super-classes

function

molecular residue^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MolecularResidue

has super-classes

mono molecular entity

is disjoint with

entire molecular entity^c

molecule complex^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MoleculeComplex

has super-classes

poly molecular composite entity

has component part some entire molecular entity^c

has sub-classes

chromosome^c, protein complex^c

is disjoint with

structured biological entity^c, structured nonbiological compound^c

monomer^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Monomer

has super-classes

mono molecular entity

has sub-classes

amino acid molecule or residue^c, carbohydrate monomer^c

is disjoint with

oligo or polymer^c, submolecular group^c

multicellular organism^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#MulticellularOrganism

is equivalent to

living organism^c and (has proper physical part^op some cell) and (is bearer of some developmental quality^c)

neoplastic process^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#NeoplasticProcess

is equivalent to

growing process^c and (is bearer of some canonicity and (projects onto some noncanonical value region^c))

neuroreactive role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#NeuroreactiveRole

has super-classes

signalling role^c

is disjoint with

hormone role^c, receptor role^c

neutron^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Neutron

has super-classes

sub atomic particle

is disjoint with

electron^c, proton^c

non steroid lipid^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#NonSteroidLipid

has super-classes

lipid molecule or residue^c

is disjoint with

eicosanoid^c, steroid^c

noncanonical processual entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#NoncanonicalProcessualEntity

is equivalent to

process^c and (is bearer of some canonicity and (projects onto some noncanonical value region^c))

is disjoint with

canonical processual entity^c

noncanonical static processual entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#NoncanonicalStaticProcessualEntity

Previous version:

noncanonical state

is equivalent to

static processual entity^c and (is bearer of some canonicity and (projects onto some noncanonical value region^c))

has sub-classes

pathological static processual entity^c

is disjoint with

canonical static processual entity^c

noncanonical value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/btl2.owl#NoncanonicalValueRegion

is disjoint with

canonical value region^c

nucleic acid nucleotide or nucleoside molecule or residue^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#NucleicAcidNucleotideOrNucleosideMoleculeOrResidue

has super-classes

organic molecular entity partition^c

has sub-classes

nucleic acid structure^c, nucleoside molecule^c, nucleotide molecule^c

is disjoint with

amino acid or peptide molecule or structure^c, carbohydrate molecule or residue^c, fatty acid molecule or residue^c, heterocyclic base molecule or residue^c, lipid molecule or residue^c

nucleic acid structure^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#NucleicAcidStructure

has super-classes

nucleic acid nucleotide or nucleoside molecule or residue^c

has component part some nucleotide molecule^c

has component part only nucleotide molecule^c

has sub-classes

chain of nucleotide monomers^c, gene^c

is disjoint with

nucleoside molecule^c, nucleotide molecule^c

nucleoside molecule^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#NucleosideMolecule

has super-classes

nucleic acid nucleotide or nucleoside molecule or residue^c

has component part some submolecular group^c

is disjoint with

nucleic acid structure^c, nucleotide molecule^c

nucleotide molecule^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#NucleotideMolecule

has super-classes

nucleic acid nucleotide or nucleoside molecule or residue^c

has component part some submolecular group^c

is disjoint with

nucleic acid structure^c, nucleoside molecule^c

nucleotide sequence information^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#NucleotideSequenceInformation

has super-classes

sequence information^c

nurse role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#NurseRole

has super-classes

health professional role^c

is disjoint with

physician role^c

observing action^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ObservingAction

has super-classes

action

occupational role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OccupationalRole

has super-classes

role

has sub-classes

educator role^c, health professional role^c, researcher role^c

is disjoint with

artefact role^c, biological system role^c, chemical role^c, family role^c, health related role^c, spatial reference role^c

oligo or polymer^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OligoOrPolymer

has super-classes

mono molecular entity

has component part some monomer^c

has component part only monomer^c

is disjoint with

monomer^c, submolecular group^c

one dimensional boundary^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OneDimensionalBoundary

has super-classes

one dimensional physical entity

order diptera value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrderDipteraValueRegion

has super-classes

class insecta value region^c

has sub-classes

family drosophilidae value region^c

order enterobacteriales value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrderEnterobacterialesValueRegion

has super-classes

class gamma proteobacteria value region^c

has sub-classes

family enterobacteriaceaea value region^c

order primates value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrderPrimatesValueRegion

has super-classes

class mammalia value region^c

has sub-classes

family hominidae value region^c

order saccharomycetales value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrderSaccharomycetalesValueRegion

has super-classes

class saccharomycetes value region^c

has sub-classes

family saccharomycetaceae value region^c

organ^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Organ

has super-classes

organism part

is disjoint with

body system^c, body system^c, organ part^c

organ part^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrganPart

has super-classes

organism part

is disjoint with

body system^c, organ^c

organ system^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrganSystem

has super-classes

body system^c

has sub-classes

central nervous system^c

organ system part^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrganSystemPart

has super-classes

body system^c

organic molecular entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrganicMolecularEntity

has super-classes

mono molecular entity

has sub-classes

bio molecular sequence structure^c

is disjoint with

inorganic molecular entity^c

organic molecular entity partition^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrganicMolecularEntityPartition

is equivalent to

organic molecular entity^c and (amino acid or peptide molecule or structure^c or carbohydrate molecule or residue^c or fatty acid molecule or residue^c or heterocyclic base molecule or residue^c or lipid molecule or residue^c or nucleic acid nucleotide or nucleoside molecule or residue^c)

has sub-classes

amino acid or peptide molecule or structure^c, carbohydrate molecule or residue^c, fatty acid molecule or residue^c, heterocyclic base molecule or residue^c, lipid molecule or residue^c, nucleic acid nucleotide or nucleoside molecule or residue^c

organism action^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrganismAction

is equivalent to

has agent some living organism^c or (has granular part some living organism^c)

has super-classes

biological action^c

has sub-classes

human action^c

organism by developmental stage partition^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrganismByDevelopmentalStagePartition

is equivalent to

living organism^c and (adult organism^c or embryonic organism^c or juvenile organism^c)

has super-classes

adult organism^c or embryonic organism^c or juvenile organism^c

has sub-classes

adult organism^c, embryonic organism^c, juvenile organism^c

organism by taxon partition^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrganismByTaxonPartition

is equivalent to

living organism^c and (eukaryote^c or prokaryote^c or virus^c)

has sub-classes

eukaryote^c, prokaryote^c, virus^c

organism interaction^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrganismInteraction

has super-classes

interacting^c

has participant only living organism^c

is disjoint with

group interaction^c, substance interaction^c

organism part^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrganismPart

is equivalent to

(has proper physical part^op some tissue^c) and (originates from^op some multicellular organism^c)

has super-classes

structured biological entity

is disjoint with

syncytium^c, cellular component^c

organism process^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#OrganismProcess

is equivalent to

biological processual entity^c and (has participant some living organism^c)

has sub-classes

biological life^c, mental process^c

organization^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Organization

has super-classes

legal entity^c

has sub-classes

government^c, regulatory body^c

parent role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ParentRole

has super-classes

family role^c

is disjoint with

child role^c, sibling role^c

pathological condition^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PathologicalCondition

is equivalent to

pathological disposition^c or pathological process^c or pathological structure^c

has super-classes

condition

pathological disposition^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PathologicalDisposition

Previous version:

prior label "dysfunction"

is equivalent to

disposition and (inheres in some is bearer of some canonicity and (projects onto some noncanonical value region^c))

pathological process^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PathologicalProcess

is equivalent to

biological processual entity^c and (is bearer of some canonicity and (projects onto some noncanonical value region^c))

pathological static processual entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PathologicalStaticProcessualEntity

Previous version:

pathological state

is equivalent to

(has participant some structured biological entity^c or (has granular part some structured biological entity^c)) and (is bearer of some canonicity and (projects onto some pathological value region^c))

has super-classes

noncanonical static processual entity^c

pathological structure^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PathologicalStructure

Previous version:

former name: "ill formed biological structure"

is equivalent to

structured biological entity and (is bearer of some canonicity and (projects onto some noncanonical value region^c))

has sub-classes

acquired abnormal structure^c, congenital abnormal structure^c

is disjoint with

well formed biological structure^c

pathological value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PathologicalValueRegion

has super-classes

noncanonical value region^c and ((canonicity and (inheres in some living organism^c or organism part^c)) or (is projection of some canonicity and (inheres in some living organism^c or organism part^c)))

has sub-classes

acquired pathological condition^c, congenital pathological condition^c

peptide function^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PeptideFunction

is equivalent to

molecular function^c and (inheres in some peptide structure^c)

peptide structure^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PeptideStructure

has super-classes

amino acid or peptide molecule or structure^c

has component part some amino acid molecule or residue^c

has sub-classes

amino acid sequence^c, entire protein molecule^c, protein domain^c, protein substructure^c

is disjoint with

amino acid molecule or residue^c

phosphate^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Phosphate

has super-classes

inorganic molecular entity^c

phylum arthropoda value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PhylumArthropodaValueRegion

has super-classes

kingdom animalia value region^c

has sub-classes

class insecta value region^c

is disjoint with

phylum chordata value region^c

phylum ascomycota value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PhylumAscomycotaValueRegion

has super-classes

kingdom fungi value region^c

has sub-classes

subphylum saccharomycotina value region^c

phylum chordata value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PhylumChordataValueRegion

has super-classes

kingdom animalia value region^c

has sub-classes

subphylum vertebrata value region^c

is disjoint with

phylum arthropoda value region^c

phylum proteobacteria value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PhylumProteobacteriaValueRegion

has super-classes

kingdom bacteria value region^c

has sub-classes

class gamma proteobacteria value region^c

physical processual entity^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PhysicalProcessualEntity

has super-classes

process^c

not (biological processual entity^c)

is disjoint with

biological processual entity^c

physical state^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PhysicalState

has super-classes

object quality

inheres in only material object^c

inheres in some material object^c

physician role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PhysicianRole

has super-classes

health professional role^c

is disjoint with

nurse role^c

plant^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Plant

has super-classes

eukaryote^c

is bearer of some taxon quality^c and (projects onto some kingdom plantae value region^c)

is disjoint with

alga^c, animal including human^c, protist^c, alga^c, animal including human^c, fungus^c, protist^c

plant cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PlantCell

is equivalent to

cell and (is bearer of some taxon quality^c and (projects onto some kingdom plantae value region^c))

is disjoint with

animal cell^c, bacterial cell^c

plant population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PlantPopulation

is equivalent to

population^c and (has granular part some plant^c) and (has granular part only plant^c)

point in time^c back to ToC or Class ToC

IRI: http://purl.org/biotop/btl2.owl#PointInTime

is in range of

has point in time^op

is disjoint with

time interval^c

poison role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PoisonRole

has super-classes

health related role^c

is disjoint with

finding role^c, food role^c, preventive role^c, therapeutic role^c, finding role^c, food role^c, preventive role^c, subject of care role^c, therapeutic role^c

poisoning^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Poisoning

has super-classes

action on biological system^c

population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Population

has super-classes

plurality of organisms

portion of heterogenous liquid^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PortionOfHeterogenousLiquid

is equivalent to

compound of collective material entities and (is bearer of some projects onto some liquid value region^c)

has sub-classes

body liquid^c

portion of heterogenous solid^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PortionOfHeterogenousSolid

is equivalent to

compound of collective material entities and (is bearer of some projects onto some solid value region^c)

has sub-classes

tissue^c

prevention action^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PreventionAction

has super-classes

action

(has agent only material object^c) and (has patient only process^c)

preventive role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PreventiveRole

has super-classes

health related role^c

is disjoint with

finding role^c, food role^c, poison role^c, therapeutic role^c, finding role^c, food role^c, poison role^c, subject of care role^c, therapeutic role^c

primate^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Primate

has super-classes

great ape^c

is bearer of some taxon quality^c and (projects onto some order primates value region^c) and (projects onto only order primates value region^c)

has sub-classes

human^c

primate population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#PrimatePopulation

is equivalent to

population^c and (has granular part some primate^c) and (has granular part only primate^c)

process^c back to ToC or Class ToC

IRI: http://purl.org/biotop/btl2.owl#Process

Previous version:

processual entity

has sub-classes

immaterial processual entity^c, physical processual entity^c, static processual entity^c

is in domain of

cooccurring with^op, has duration^op, has point in time^op

is in range of

cooccurring with^op

process quality^c back to ToC or Class ToC

IRI: http://purl.org/biotop/btl2.owl#ProcessQuality

has super-classes

inheres in some process^c

producing^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Producing

has super-classes

affecting^c

prokaryote^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Prokaryote

has super-classes

organism by taxon partition^c

is bearer of some projects onto some microscopic value region^c

has sub-classes

archaebacterial cell^c, bacterial cell^c, chlamydia cell^c, rickettsia cell^c

is disjoint with

eukaryote^c, virus^c

protein complex^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ProteinComplex

has super-classes

molecule complex^c

protein domain^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ProteinDomain

has super-classes

peptide structure^c

proper physical part of^op some entire protein molecule^c

protein substructure^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ProteinSubstructure

has super-classes

peptide structure^c

proper physical part of^op some entire protein molecule^c

protein subunit^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ProteinSubunit

has super-classes

entire protein molecule^c

protist^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Protist

has super-classes

eukaryote^c

is bearer of some projects onto some microscopic value region^c

is disjoint with

alga^c, animal including human^c, plant^c, alga^c, animal including human^c, fungus^c, plant^c

protist population^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ProtistPopulation

is equivalent to

population^c and (has granular part some protist^c) and (has granular part only protist^c)

proton^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Proton

has super-classes

sub atomic particle

is disjoint with

electron^c, neutron^c

radiation^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Radiation

has super-classes

material object^c

reagent role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ReagentRole

has super-classes

chemical role^c

is disjoint with

catalytic role^c, indicator role^c

receptor role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ReceptorRole

has super-classes

signalling role^c

is disjoint with

hormone role^c, neuroreactive role^c

regulation or law^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#RegulationOrLaw

has super-classes

intellectual product^c

is disjoint with

categorization system^c

regulatory body^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#RegulatoryBody

has super-classes

organization^c

reptile^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#Reptile

has super-classes

vertebrate^c

is disjoint with

amphibian^c, bird^c, fish^c, mammal^c

researcher role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#ResearcherRole

has super-classes

occupational role^c

is disjoint with

educator role^c, health professional role^c

rickettsia cell^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#RickettsiaCell

has super-classes

prokaryote^c

is disjoint with

chlamydia cell^c

RNA chain^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#RNAChain

has super-classes

chain of nucleotide monomers^c

is disjoint with

DNA chain^c

sequence information^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#SequenceInformation

has super-classes

information object

has sub-classes

amino acid sequence information^c, bio molecular sequence information^c, carbohydrate sequence information^c, nucleotide sequence information^c

sibling role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#SiblingRole

has super-classes

family role^c

is disjoint with

child role^c, parent role^c

sign or symptom role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#SignOrSymptomRole

has super-classes

finding role^c

is disjoint with

examination result role^c

signalling role^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#SignallingRole

has super-classes

biological system role^c

has sub-classes

hormone role^c, neuroreactive role^c, receptor role^c

is disjoint with

immunologic role^c, vitamin role^c

social action^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#SocialAction

has super-classes

action

has agent only human population^c or organization^c

social behavior^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#SocialBehavior

is equivalent to

behavior^c and (has agent some population^c)

is disjoint with

individual behavior^c

solid value region^c back to ToC or Class ToC

IRI: http://purl.org/biotop/biotop.owl#SolidValueRegion

has super-classes

state of matter value region^c

is disjoint with

gaseous value region^c, liquid value region^c