Classes

Cluster of homologs
Cluster of orthologs
Cluster of paralogs
Dataset
gene
Gene tree node
Hierarchical clustering tree
Hierarchical gene tree
Orthology dataset
protein
Resource
s o 0000104
s o 0000704
Sequence unit
Subgene
Taxon
Taxonomic range

Cluster of homologs^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#HomologsCluster

has super-classes: Gene tree node^c; Has homologous^op only Gene tree node^c; Has taxonomic range^op only Taxonomic range^c; c d a o 0000178^op only c d a o 0000064; In dataset^op some Orthology dataset^c
has sub-classes: Cluster of orthologs^c, Cluster of paralogs^c
is in domain of: Has taxonomic range^op

Cluster of orthologs^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#OrthologsCluster

has super-classes: Cluster of homologs^c; c d a o 0000178^op only c d a o 0000121

Cluster of paralogs^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#ParalogsCluster

has super-classes: Cluster of homologs^c; c d a o 0000178^op only c d a o 0000077

Dataset^c back to ToC or Class ToC

IRI: http://rdfs.org/ns/void#Dataset

has sub-classes: Orthology dataset^c

gene^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#Gene

has super-classes: Sequence unit^c; in taxon^op some n c b i 1

Gene tree node^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#GeneTreeNode

has super-classes: c d a o 0000140; identifier^dp some string
has sub-classes: Cluster of homologs^c, Sequence unit^c
is in domain of: In dataset^op
is in range of: Has cluster^op

Hierarchical clustering tree^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#HierarchicalClusteringTree

has super-classes: c d a o 0000012
has sub-classes: Hierarchical gene tree ^c

Hierarchical gene tree ^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#HierarchicalGeneTree

has super-classes: Hierarchical clustering tree^c; c d a o 0000178^op only Gene tree node^c; c d a o 0000178^op some gene^c

Orthology dataset^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#OrthologyDataset

has super-classes: Dataset^c; Has source^op some Resource^c; version^dp some string
is in domain of: Has source^op
is in range of: In dataset^op

protein^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#Protein

has super-classes: Sequence unit^c; contained in^op some s i o 000750^c

Resource^c back to ToC or Class ToC

IRI: http://www.w3.org/2000/01/rdf-schema#Resource

is in range of: Has source^op

s o 0000104^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000104

is equivalent to: protein^c

s o 0000704^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000704

is equivalent to: gene^c

Sequence unit^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#SequenceUnit

has super-classes: c d a o 0000138^c; s o 0001411^c; Gene tree node^c
has sub-classes: Subgene^c, gene^c, protein^c

Subgene^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#Subgene

has super-classes: Sequence unit^c; c d a o 0000194^op some gene^c

Taxon^c back to ToC or Class ToC

IRI: http://identifiers.org/taxonomy

Taxonomic range^c back to ToC or Class ToC

IRI: http://purl.org/net/orth#TaxonomicRange

has super-classes: tax range id^dp only string; tax range^dp only string
is in domain of: tax range^dp
is in range of: Has taxonomic range^op

contained in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001018

Has cluster^op back to ToC or Object Property ToC

IRI: http://purl.org/net/orth#hasCluster

has super-properties: c d a o 0000178^op
has range: Gene tree node^c
is inverse of: In dataset^op

Has homologous^op back to ToC or Object Property ToC

IRI: http://purl.org/net/orth#hasHomologous

has super-properties: s i o 000028^op
is inverse of: Is homologous member^op

Has source^op back to ToC or Object Property ToC

IRI: http://purl.org/net/orth#hasSource

has super-properties: c d a o 0000178^op
has domain: Orthology dataset^c
has range: Resource^c

Has taxonomic range^op back to ToC or Object Property ToC

IRI: http://purl.org/net/orth#hasTaxonomicRange

has super-properties: c d a o 0000178^op
has domain: Cluster of homologs^c
has range: Taxonomic range^c

In dataset^op back to ToC or Object Property ToC

IRI: http://rdfs.org/ns/void#inDataset

has domain: Gene tree node^c
has range: Orthology dataset^c
is inverse of: Has cluster^op

in taxon^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002162

Is homologous member^op back to ToC or Object Property ToC

IRI: http://purl.org/net/orth#isHomologMember

has super-properties: member of^op
is inverse of: Has homologous^op

member of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002350

has sub-properties: Is homologous member^op

version information^op back to ToC or Object Property ToC

IRI: http://bioontology.org/ontologies/biositemap.owl#version_information

Data Properties

description
identifier
tax range
tax range id
version

description^dp back to ToC or Data Property ToC

IRI: http://bioontology.org/ontologies/biositemap.owl#description

identifier^dp back to ToC or Data Property ToC

IRI: http://purl.org/dc/terms/identifier

has range: string

tax range^dp back to ToC or Data Property ToC

IRI: http://purl.org/net/orth#taxRange

has domain: Taxonomic range^c

tax range id^dp back to ToC or Data Property ToC

IRI: http://purl.org/net/orth#taxRangeId

version^dp back to ToC or Data Property ToC

IRI: http://purl.org/pav#version

This HTML document was obtained by processing the OWL ontology source code through LODE, Live OWL Documentation Environment, developed by Silvio Peroni.

Table of Content

Classes

Cluster of homologs^c back to ToC or Class ToC

Cluster of orthologs^c back to ToC or Class ToC

Cluster of paralogs^c back to ToC or Class ToC

Dataset^c back to ToC or Class ToC

gene^c back to ToC or Class ToC

Gene tree node^c back to ToC or Class ToC

Hierarchical clustering tree^c back to ToC or Class ToC

Hierarchical gene tree ^c back to ToC or Class ToC

Orthology dataset^c back to ToC or Class ToC

protein^c back to ToC or Class ToC

Resource^c back to ToC or Class ToC

s o 0000104^c back to ToC or Class ToC

s o 0000704^c back to ToC or Class ToC

Sequence unit^c back to ToC or Class ToC

Subgene^c back to ToC or Class ToC

Taxon^c back to ToC or Class ToC

Taxonomic range^c back to ToC or Class ToC

Object Properties

contained in^op back to ToC or Object Property ToC

Has cluster^op back to ToC or Object Property ToC

Has homologous^op back to ToC or Object Property ToC

Has source^op back to ToC or Object Property ToC

Has taxonomic range^op back to ToC or Object Property ToC

In dataset^op back to ToC or Object Property ToC

in taxon^op back to ToC or Object Property ToC

Is homologous member^op back to ToC or Object Property ToC

member of^op back to ToC or Object Property ToC

version information^op back to ToC or Object Property ToC

Data Properties

description^dp back to ToC or Data Property ToC

identifier^dp back to ToC or Data Property ToC

tax range^dp back to ToC or Data Property ToC

tax range id^dp back to ToC or Data Property ToC

version^dp back to ToC or Data Property ToC

Annotation Properties

description^ap back to ToC or Annotation Property ToC

Namespace Declarations back to ToC

Table of Content

Classes

Cluster of homologsc back to ToC or Class ToC

Cluster of orthologsc back to ToC or Class ToC

Cluster of paralogsc back to ToC or Class ToC

Datasetc back to ToC or Class ToC

genec back to ToC or Class ToC

Gene tree nodec back to ToC or Class ToC

Hierarchical clustering treec back to ToC or Class ToC

Hierarchical gene tree c back to ToC or Class ToC

Orthology datasetc back to ToC or Class ToC

proteinc back to ToC or Class ToC

Resourcec back to ToC or Class ToC

s o 0000104c back to ToC or Class ToC

s o 0000704c back to ToC or Class ToC

Sequence unitc back to ToC or Class ToC

Subgenec back to ToC or Class ToC

Taxonc back to ToC or Class ToC

Taxonomic rangec back to ToC or Class ToC

Object Properties

contained inop back to ToC or Object Property ToC

Has clusterop back to ToC or Object Property ToC

Has homologousop back to ToC or Object Property ToC

Has sourceop back to ToC or Object Property ToC

Has taxonomic rangeop back to ToC or Object Property ToC

In datasetop back to ToC or Object Property ToC

in taxonop back to ToC or Object Property ToC

Is homologous memberop back to ToC or Object Property ToC

member ofop back to ToC or Object Property ToC

version informationop back to ToC or Object Property ToC

Data Properties

descriptiondp back to ToC or Data Property ToC

identifierdp back to ToC or Data Property ToC

tax rangedp back to ToC or Data Property ToC

tax range iddp back to ToC or Data Property ToC

versiondp back to ToC or Data Property ToC

Annotation Properties

descriptionap back to ToC or Annotation Property ToC

Namespace Declarations back to ToC

Cluster of homologs^c back to ToC or Class ToC

Cluster of orthologs^c back to ToC or Class ToC

Cluster of paralogs^c back to ToC or Class ToC

Dataset^c back to ToC or Class ToC

gene^c back to ToC or Class ToC

Gene tree node^c back to ToC or Class ToC

Hierarchical clustering tree^c back to ToC or Class ToC

Hierarchical gene tree ^c back to ToC or Class ToC

Orthology dataset^c back to ToC or Class ToC

protein^c back to ToC or Class ToC

Resource^c back to ToC or Class ToC

s o 0000104^c back to ToC or Class ToC

s o 0000704^c back to ToC or Class ToC

Sequence unit^c back to ToC or Class ToC

Subgene^c back to ToC or Class ToC

Taxon^c back to ToC or Class ToC

Taxonomic range^c back to ToC or Class ToC

contained in^op back to ToC or Object Property ToC

Has cluster^op back to ToC or Object Property ToC

Has homologous^op back to ToC or Object Property ToC

Has source^op back to ToC or Object Property ToC

Has taxonomic range^op back to ToC or Object Property ToC

In dataset^op back to ToC or Object Property ToC

in taxon^op back to ToC or Object Property ToC

Is homologous member^op back to ToC or Object Property ToC

member of^op back to ToC or Object Property ToC

version information^op back to ToC or Object Property ToC

description^dp back to ToC or Data Property ToC

identifier^dp back to ToC or Data Property ToC

tax range^dp back to ToC or Data Property ToC

tax range id^dp back to ToC or Data Property ToC

version^dp back to ToC or Data Property ToC

description^ap back to ToC or Annotation Property ToC