WARNING: An illegal reflective access operation has occurred WARNING: Illegal reflective access by com.google.inject.internal.cglib.core.$ReflectUtils$1 (file:/usr/local/src/webapp/archivo/archivo/helpingBinaries/profilechecker-1.1.0.jar) to method java.lang.ClassLoader.defineClass(java.lang.String,byte[],int,int,java.security.ProtectionDomain) WARNING: Please consider reporting this to the maintainers of com.google.inject.internal.cglib.core.$ReflectUtils$1 WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations WARNING: All illegal access operations will be denied in a future release [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000070 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002370 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000540 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002371 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002097 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0008380 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0002321 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0002563 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000542 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0002322 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000473 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0001043 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000995 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_93934 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0001044 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000992 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0002892 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0019391 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0003101 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_10116 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000231 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000199 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/RO_0000053 in punning not allowed [Declaration(DataProperty()), Declaration(ObjectProperty())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0002499 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1000045 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0002327 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0002328 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000826 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1000043 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0005922 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000613 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0007795 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1001937 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000031 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0001295 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002384 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0002917 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0002573 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000553 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1000601 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0019600 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000002 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0001728 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000182 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0002087 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0001723 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000220 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000222 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1000058 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000916 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000621 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1000178 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1000332 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000169 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000010 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_4097 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0004851 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000922 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000007 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0005543 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1000223 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1001951 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0005575 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000239 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000756 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000451 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0003869 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000637 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0002231 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000519 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002048 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_9534 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002046 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0001348 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_7108 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000641 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1000595 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000248 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000066 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0017611 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000182 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000310 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0019470 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_10036 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000029 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1001051 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0019471 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_9913 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000948 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000272 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0001911 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0003175 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000746 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000236 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000632 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000235 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0001017 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0002092 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000167 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0001013 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000955 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0001075 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_10029 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000515 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0009637 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000304 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0001416 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000209 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1000416 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000125 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_10090 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002072 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0015459 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_9986 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002114 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0001264 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000084 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000178 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000970 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002113 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0000964 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002107 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_9615 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000691 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000174 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000571 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000693 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1001512 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000129 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000574 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000128 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/RO_0001000 in punning not allowed [Declaration(DataProperty()), Declaration(ObjectProperty())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000765 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_60711 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0009214 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0001663 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_1000497 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002481 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0009061 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_1000307 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000136 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0002553 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002367 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0002369 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/UBERON_0001155 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/MONDO_0018177 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000817 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/NCBITaxon_9606 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000284 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0001378 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://purl.obolibrary.org/obo/CL_0000138 in punning not allowed [Declaration(Datatype()), Declaration(Class())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0005578 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000565 in punning not allowed [Declaration(Class()), Declaration(Datatype())] [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - Illegal redeclarations of entities: reuse of entity http://www.ebi.ac.uk/efo/EFO_0000324 in punning not allowed [Declaration(Class()), Declaration(Datatype())] OWL2_DL: 13963 violations OWL2_QL: 20724 violations OWL2_EL: 15277 violations OWL2_RL: 36732 violations OWL2_FULL: 13963 violations