AFO Curation (REC/2020/12)

URI	`http://purl.allotrope.org/ontologies/result#AFR_0000923`
Super-classes	cdao:IAO_0000030^c
Sub-classes	af-r:AFR_0001221^c

URI	`http://purl.allotrope.org/ontologies/result#AFR_0001221`
Description	Term granularity relates an entity to an instance of granularity that describes the level of granularity that a term belongs to. [Allotrope]
Example(s)	A vial is a container that exists in macroscopic scale.
Super-classes	af-r:AFR_0000923^c
In range of	af-x:AFX_0002796^ap
Members	af-r:AFR_0001225 af-r:AFR_0001492 af-r:AFR_0001222 af-r:AFR_0001223 af-r:AFR_0001224

URI	`http://purl.obolibrary.org/obo/IAO_0000030`
Sub-classes	af-r:AFR_0000923^c

URI	`http://xmlns.com/foaf/0.1/name`

Annotation Properties ↑

is equivalent to
has proposed restriction
has granularity
is aligned with BFO
is defined class
is replaced by role
has close match
has exact match
has related
has perspective
is universal class
has design pattern
imported from
derived from
contributor
coverage
creator
date
description
format
identifier
language
publisher
relation
rights
source
subject
title
type
abstract
access rights
alternative
available
bibliographic citation
conforms to
contributor
coverage
created
creator
date
date accepted
date copyrighted
date submitted
description
extend
format
has format
has part
has version
identifier
is format of
is part of
is referenced by
is replaced by
is required by
is version of
issued
language
license
medium
modified
publisher
references
relation
replaces
requires
rights
rights holder
source
spatial
subject
table of contents
temporal
title
type
valid
alternative label
change note
definition
editorial note
example
hidden label
history note
note
preferred label
scope note

is equivalent to^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002794`
Description	Property is a note about a proposed logical expression in order to describe the term as defined class. [Allotrope]
Super-properties	skos:note^ap

has proposed restriction^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002795`
Description	Property is a note about a proposed expression of a restriction that the term should be a subclass of. [Allotrope]
Super-properties	skos:note^ap

has granularity^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002796`
Description	Property specifies level of granularity the term mainly belongs to. [Allotrope]
Super-properties	skos:note^ap
Range(s)	af-r:AFR_0001221^c

is aligned with BFO^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002797`
Description	Property tracks terms that have been aligned with BFO during development. [Allotrope]
Super-properties	skos:editorialNote^ap

is defined class^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002798`
Description	Is defined class flags a resource as being a class that can be defined by necessary and sufficient conditions. [Allotrope]
Super-properties	skos:note^ap

is replaced by role^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002799`
Description	An annotation predicate used to identify entity replacement by a role. [Allotrope]
Super-properties	skos:note^ap

has close match^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002808`
Description	Has close match establishes a connection between two resources that have a high degree of agreement in meaning such that they can be used interchangeably. [Allotrope]
Super-properties	skos:note^ap

has exact match^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002809`
Description	Has exact match establishes a connection between two resources that have completely same meaning such that they can be used interchangeably. [Allotrope]
Super-properties	af-x:AFX_0002808^ap

has related^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002811`
Description	Has related establishes a connection between two resources that have an associative relationship. [Allotrope]
Super-properties	skos:note^ap

has perspective^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002815`
Description	Reference that maps a class to a perspective. [Allotrope]
Super-properties	skos:scopeNote^ap

is universal class^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002818`
Description	Is universal class flags a resource as being a primitive class that stands on its own. [Allotrope]
Super-properties	skos:note^ap

has design pattern^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002850`
Description	Has design pattern annotates a resource with a reference to a design pattern. [Allotrope]
Super-properties	skos:note^ap

imported from^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002865`
Description	The original source of imported information. [PAV]
Super-properties	skos:note^ap

derived from^ap # APs

URI	`http://purl.allotrope.org/ontologies/property#AFX_0002866`
Description	Derived from a different resource. [PAV]
Super-properties	skos:note^ap

contributor^ap # APs

URI	`http://purl.org/dc/elements/1.1/contributor`

coverage^ap # APs

URI	`http://purl.org/dc/elements/1.1/coverage`

creator^ap # APs

URI	`http://purl.org/dc/elements/1.1/creator`

date^ap # APs

URI	`http://purl.org/dc/elements/1.1/date`

description^ap # APs

URI	`http://purl.org/dc/elements/1.1/description`

format^ap # APs

URI	`http://purl.org/dc/elements/1.1/format`

identifier^ap # APs

URI	`http://purl.org/dc/elements/1.1/identifier`

language^ap # APs

URI	`http://purl.org/dc/elements/1.1/language`

publisher^ap # APs

URI	`http://purl.org/dc/elements/1.1/publisher`

relation^ap # APs

URI	`http://purl.org/dc/elements/1.1/relation`

rights^ap # APs

URI	`http://purl.org/dc/elements/1.1/rights`

source^ap # APs

URI	`http://purl.org/dc/elements/1.1/source`

subject^ap # APs

URI	`http://purl.org/dc/elements/1.1/subject`

title^ap # APs

URI	`http://purl.org/dc/elements/1.1/title`

type^ap # APs

URI	`http://purl.org/dc/elements/1.1/type`

abstract^ap # APs

URI	`http://purl.org/dc/terms/abstract`
Super-properties	dct:description^ap dc:description^ap

access rights^ap # APs

URI	`http://purl.org/dc/terms/accessRights`
Super-properties	dc:rights^ap

alternative^ap # APs

URI	`http://purl.org/dc/terms/alternative`
Super-properties	dc:title^ap

available^ap # APs

URI	`http://purl.org/dc/terms/available`
Super-properties	dc:date^ap

bibliographic citation^ap # APs

URI	`http://purl.org/dc/terms/bibliographicCitation`
Super-properties	dc:identifier^ap

conforms to^ap # APs

URI	`http://purl.org/dc/terms/conformsTo`
Super-properties	dc:relation^ap dct:relation^ap

contributor^ap # APs

URI	`http://purl.org/dc/terms/contributor`
Super-properties	dc:contributor^ap

coverage^ap # APs

URI	`http://purl.org/dc/terms/coverage`
Super-properties	dc:coverage^ap

created^ap # APs

URI	`http://purl.org/dc/terms/created`
Super-properties	dc:date^ap

creator^ap # APs

URI	`http://purl.org/dc/terms/creator`
Super-properties	dc:creator^ap

date^ap # APs

URI	`http://purl.org/dc/terms/date`
Super-properties	dc:date^ap

date accepted^ap # APs

URI	`http://purl.org/dc/terms/dateAccepted`
Super-properties	dc:date^ap

date copyrighted^ap # APs

URI	`http://purl.org/dc/terms/dateCopyrighted`
Super-properties	dc:date^ap

date submitted^ap # APs

URI	`http://purl.org/dc/terms/dateSubmitted`
Super-properties	dc:date^ap

description^ap # APs

URI	`http://purl.org/dc/terms/description`
Super-properties	dc:description^ap

extend^ap # APs

URI	`http://purl.org/dc/terms/extent`
Super-properties	dc:format^ap

format^ap # APs

URI	`http://purl.org/dc/terms/format`
Super-properties	dc:format^ap

has format^ap # APs

URI	`http://purl.org/dc/terms/hasFormat`
Super-properties	dc:relation^ap dct:relation^ap

has part^ap # APs

URI	`http://purl.org/dc/terms/hasPart`
Super-properties	dc:relation^ap dct:relation^ap

has version^ap # APs

URI	`http://purl.org/dc/terms/hasVersion`
Super-properties	dct:relation^ap dc:relation^ap

identifier^ap # APs

URI	`http://purl.org/dc/terms/identifier`
Super-properties	dc:identifier^ap

is format of^ap # APs

URI	`http://purl.org/dc/terms/isFormatOf`
Super-properties	dc:relation^ap dct:relation^ap

is part of^ap # APs

URI	`http://purl.org/dc/terms/isPartOf`
Super-properties	dc:relation^ap dct:relation^ap

is referenced by^ap # APs

URI	`http://purl.org/dc/terms/isReferencedBy`
Super-properties	dc:relation^ap dct:relation^ap

is replaced by^ap # APs

URI	`http://purl.org/dc/terms/isReplacedBy`
Super-properties	dct:relation^ap dc:relation^ap

is required by^ap # APs

URI	`http://purl.org/dc/terms/isRequiredBy`
Super-properties	dc:relation^ap dct:relation^ap

is version of^ap # APs

URI	`http://purl.org/dc/terms/isVersionOf`
Super-properties	dct:relation^ap dc:relation^ap

issued^ap # APs

URI	`http://purl.org/dc/terms/issued`
Super-properties	dc:date^ap

language^ap # APs

URI	`http://purl.org/dc/terms/language`
Super-properties	dc:language^ap

license^ap # APs

URI	`http://purl.org/dc/terms/license`
Super-properties	dc:rights^ap

medium^ap # APs

URI	`http://purl.org/dc/terms/medium`
Super-properties	dc:format^ap

modified^ap # APs

URI	`http://purl.org/dc/terms/modified`
Super-properties	dc:date^ap

publisher^ap # APs

URI	`http://purl.org/dc/terms/publisher`
Super-properties	dc:publisher^ap

references^ap # APs

URI	`http://purl.org/dc/terms/references`
Super-properties	dc:relation^ap dct:relation^ap

relation^ap # APs

URI	`http://purl.org/dc/terms/relation`
Super-properties	dc:relation^ap

replaces^ap # APs

URI	`http://purl.org/dc/terms/replaces`
Super-properties	dc:relation^ap dct:relation^ap

requires^ap # APs

URI	`http://purl.org/dc/terms/requires`
Super-properties	dct:relation^ap dc:relation^ap

rights^ap # APs

URI	`http://purl.org/dc/terms/rights`
Super-properties	dc:rights^ap

rights holder^ap # APs

URI	`http://purl.org/dc/terms/rightsHolder`

source^ap # APs

URI	`http://purl.org/dc/terms/source`
Super-properties	dct:relation^ap dc:source^ap

spatial^ap # APs

URI	`http://purl.org/dc/terms/spatial`
Super-properties	dc:coverage^ap

subject^ap # APs

URI	`http://purl.org/dc/terms/subject`
Super-properties	dc:subject^ap

table of contents^ap # APs

URI	`http://purl.org/dc/terms/tableOfContents`
Super-properties	dct:description^ap dc:description^ap

temporal^ap # APs

URI	`http://purl.org/dc/terms/temporal`
Super-properties	dc:coverage^ap

title^ap # APs

URI	`http://purl.org/dc/terms/title`
Super-properties	dc:title^ap

type^ap # APs

URI	`http://purl.org/dc/terms/type`
Super-properties	dc:type^ap

valid^ap # APs

URI	`http://purl.org/dc/terms/valid`
Super-properties	dc:date^ap

alternative label^ap # APs

URI	`http://www.w3.org/2004/02/skos/core#altLabel`
Is Defined By	http://www.w3.org/2004/02/skos/core
Description	An alternative lexical label for a resource.
Example(s)	Acronyms, abbreviations, spelling variants, and irregular plural/singular forms may be included among the alternative labels for a concept. Mis-spelled terms are normally included as hidden labels (see skos:hiddenLabel).
Super-properties	rdfs:label

change note^ap # APs

URI	`http://www.w3.org/2004/02/skos/core#changeNote`
Is Defined By	http://www.w3.org/2004/02/skos/core
Description	A note about a modification to a concept.
Super-properties	skos:note^ap

definition^ap # APs

URI	`http://www.w3.org/2004/02/skos/core#definition`
Is Defined By	http://www.w3.org/2004/02/skos/core
Description	A statement or formal explanation of the meaning of a concept.
Super-properties	skos:note^ap

editorial note^ap # APs

URI	`http://www.w3.org/2004/02/skos/core#editorialNote`
Is Defined By	http://www.w3.org/2004/02/skos/core
Description	A note for an editor, translator or maintainer of the vocabulary.
Super-properties	skos:note^ap

example^ap # APs

URI	`http://www.w3.org/2004/02/skos/core#example`
Is Defined By	http://www.w3.org/2004/02/skos/core
Description	An example of the use of a concept.
Super-properties	skos:note^ap

hidden label^ap # APs

URI	`http://www.w3.org/2004/02/skos/core#hiddenLabel`
Is Defined By	http://www.w3.org/2004/02/skos/core
Description	A lexical label for a resource that should be hidden when generating visual displays of the resource, but should still be accessible to free text search operations.
Super-properties	rdfs:label

history note^ap # APs

URI	`http://www.w3.org/2004/02/skos/core#historyNote`
Is Defined By	http://www.w3.org/2004/02/skos/core
Description	A note about the past state/use/meaning of a concept.
Super-properties	skos:note^ap

note^ap # APs

URI	`http://www.w3.org/2004/02/skos/core#note`
Is Defined By	http://www.w3.org/2004/02/skos/core
Description	A general note, for any purpose.
Scope Notes	This property may be used directly, or as a super-property for more specific note types.

preferred label^ap # APs

URI	`http://www.w3.org/2004/02/skos/core#prefLabel`
Is Defined By	http://www.w3.org/2004/02/skos/core
Description	The preferred lexical label for a resource, in a given language.
Super-properties	rdfs:label

scope note^ap # APs

URI	`http://www.w3.org/2004/02/skos/core#scopeNote`
Is Defined By	http://www.w3.org/2004/02/skos/core
Description	A note that helps to clarify the meaning and/or the use of a concept.
Super-properties	skos:note^ap

Named Individuals ↑

(c) 2019 Allotrope Foundation
Creative Commons Attribution 4.0 International Public License
Derivative works attribution
atomic scale
macroscopic scale
mesoscopic scale
microscopic scale
subatomic scale

atomic scaleⁿⁱ

Class(es)

af-r:AFR_0001221

URI	`http://purl.allotrope.org/ontologies/result#AFR_0001222`
Description	Atomic scale refers to the distance between the nuclei of atoms in a material. This space is extremely large compared to the size of the atomic nucleus, and is related to the chemical bonds which bind atoms together. The spacing between atoms in most ordered solids is on the order of a few ångströms (a few tenths of a nanometer). [Wikipedia]

macroscopic scaleⁿⁱ

Class(es)

af-r:AFR_0001221

URI http://purl.allotrope.org/ontologies/result#AFR_0001223

Description The macroscopic scale is the length scale on which objects or phenomena are large enough to be visible almost practically with the naked eye, without magnifying optical instruments. When applied to physical phenomena and bodies, the macroscopic scale describes things as a person can directly perceive them, without the aid of magnifying devices. This is in contrast to observations (microscopy) or theories (microphysics, statistical physics) of objects of geometric lengths smaller than perhaps some hundreds of micrometers. [Wikipedia]

mesoscopic scaleⁿⁱ

Class(es)

af-r:AFR_0001221

URI	`http://purl.allotrope.org/ontologies/result#AFR_0001224`
Description	Mesoscopic physics is a sub-discipline of condensed matter physics that deals with materials of an intermediate length. The scale of these materials can be described as being between the size of a quantity of atoms (such as a molecule) and of materials measuring micrometers. [Wikipedia]

microscopic scaleⁿⁱ

Class(es)

af-r:AFR_0001221

URI	`http://purl.allotrope.org/ontologies/result#AFR_0001225`
Description	In physics, the microscopic scale is sometimes considered the scale between the macroscopic and the quantum realm. Microscopic units and measurements are used to classify and describe very small objects. One common microscopic length scale unit is the Micrometer (μm) - one millionth of 1 meter. [Wikipedia]

subatomic scaleⁿⁱ

Class(es)

af-r:AFR_0001221

URI	`http://purl.allotrope.org/ontologies/result#AFR_0001492`
Description	The subatomic scale is is the scale of the subatomic particles, such as electrons, protons, photons. [Wikipedia]

Derivative works attributionⁿⁱ

URI http://purl.allotrope.org/voc/attribution

Description These taxonomies contain material or may constitute derivative works of material which may be subject to copyright by one of the following organizations. By using these taxonomies, you agree to the following terms and conditions applicable to its contents: ****************************************************************************** Attribution Notice for National Center for Biomedical Ontology materials. This work contains material from the Cell Ontology and Clinical Measurement Ontology, available here: http://bioportal.bioontology.org/. ****************************************************************************** Attribution Notice for ChEBI This work contains material from the European Bioinformatics Institute’s ChEBI database. ****************************************************************************** Attribution Notice for Quantities Units Dimensions Data Types (http://www.qudt.org/) This work contains content from www.qudt.org and is used pursuant to a Creative Commons License available here: http://creativecommons.org/licenses/by-sa/3.0/us/legalcode. The original work may have been modified. ****************************************************************************** Copyright and Attribution Notice for Dublin Core Metadata Initiative Document This work contains material from the following DCMI document used pursuant to a creative commons license available here: https://creativecommons.org/licenses/by/4.0/legalcode. This material may have been modified or changed. Timestamped URL: http://dublincore.org/documents/2012/06/14/dcmi-terms/ Date Issued: 2012-06-14 Document Status: This is a DCMI Recommendation. Copyright © 1995-2015 DCMI. All Rights Reserved. DCMI liability, trademark/service mark, document use and software licensing rules apply. ******************************************************************************

(c) 2019 Allotrope Foundationⁿⁱ

URI	`http://purl.allotrope.org/voc/copyright`
Description	(c) 2019 Allotrope Foundation

Creative Commons Attribution 4.0 International Public Licenseⁿⁱ

URI http://purl.allotrope.org/voc/creative-commons-attribution-license

Description This work is licensed under a Creative Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/. THESE MATERIALS ARE PROVIDED "AS IS" AND ALLOTROPE EXPRESSLY DISCLAIMS ALL WARRANTIES, EXPRESS, IMPLIED OR STATUTORY, INCLUDING, WITHOUT LIMITATION, THE WARRANTIES OF NON-INFRINGEMENT, TITLE, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. Copyright © 2015-2020 Allotrope Foundation

Noneⁿⁱ

URI	`http://www.allotrope.org`

^c	Classes
^op	Object Properties
^fp	Functional Properties
^dp	Data Properties
^dp	Annotation Properties
^p	Properties
ⁿⁱ	Named Individuals

AFO Curation (REC/2020/12)

Metadata

Description

Table of Contents

Overview

Classes ↑

facetc # Classes

term granularityc # Classes

information content entityc # Classes

Datatype Properties ↑

namedp # DPs

Annotation Properties ↑

is equivalent toap # APs

has proposed restrictionap # APs

has granularityap # APs

is aligned with BFOap # APs

is defined classap # APs

is replaced by roleap # APs

has close matchap # APs

has exact matchap # APs

has relatedap # APs

has perspectiveap # APs

is universal classap # APs

has design patternap # APs

imported fromap # APs

derived fromap # APs

contributorap # APs

coverageap # APs

creatorap # APs

dateap # APs

descriptionap # APs

formatap # APs

identifierap # APs

languageap # APs

publisherap # APs

relationap # APs

rightsap # APs

sourceap # APs

subjectap # APs

titleap # APs

typeap # APs

abstractap # APs

access rightsap # APs

alternativeap # APs

availableap # APs

bibliographic citationap # APs

conforms toap # APs

contributorap # APs

coverageap # APs

createdap # APs

creatorap # APs

dateap # APs

date acceptedap # APs

date copyrightedap # APs

date submittedap # APs

descriptionap # APs

extendap # APs

formatap # APs

has formatap # APs

has partap # APs

has versionap # APs

identifierap # APs

is format ofap # APs

is part ofap # APs

is referenced byap # APs

is replaced byap # APs

is required byap # APs

is version ofap # APs

issuedap # APs

languageap # APs

licenseap # APs

mediumap # APs

modifiedap # APs

publisherap # APs

referencesap # APs

relationap # APs

replacesap # APs

requiresap # APs

rightsap # APs

rights holderap # APs

facet^c # Classes

term granularity^c # Classes

information content entity^c # Classes

name^dp # DPs

is equivalent to^ap # APs

has proposed restriction^ap # APs

has granularity^ap # APs

is aligned with BFO^ap # APs

is defined class^ap # APs

is replaced by role^ap # APs

has close match^ap # APs

has exact match^ap # APs

has related^ap # APs

has perspective^ap # APs

is universal class^ap # APs

has design pattern^ap # APs

imported from^ap # APs

derived from^ap # APs

contributor^ap # APs

coverage^ap # APs

creator^ap # APs

date^ap # APs

description^ap # APs

format^ap # APs

identifier^ap # APs

language^ap # APs

publisher^ap # APs

relation^ap # APs

rights^ap # APs

source^ap # APs

subject^ap # APs

title^ap # APs

type^ap # APs

abstract^ap # APs

access rights^ap # APs

alternative^ap # APs

available^ap # APs

bibliographic citation^ap # APs

conforms to^ap # APs

contributor^ap # APs

coverage^ap # APs

created^ap # APs

creator^ap # APs

date^ap # APs

date accepted^ap # APs

date copyrighted^ap # APs

date submitted^ap # APs

description^ap # APs

extend^ap # APs

format^ap # APs

has format^ap # APs

has part^ap # APs

has version^ap # APs

identifier^ap # APs

is format of^ap # APs

is part of^ap # APs

is referenced by^ap # APs

is replaced by^ap # APs

is required by^ap # APs

is version of^ap # APs

issued^ap # APs

language^ap # APs

license^ap # APs

medium^ap # APs

modified^ap # APs

publisher^ap # APs

references^ap # APs

relation^ap # APs

replaces^ap # APs

requires^ap # APs

rights^ap # APs

rights holder^ap # APs

source^ap # APs

spatial^ap # APs

subject^ap # APs

table of contents^ap # APs

temporal^ap # APs

title^ap # APs

type^ap # APs

valid^ap # APs