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AFT System - Perspective (REC/2020/09)

Metadata

URI
http://purl.allotrope.org/voc/afo/perspective/REC/2020/09/system
Publisher(s)
Allotrope Foundation
Contributor(s)
Allotrope Foundation
Modified
2020-06-24T12:00:00+00:00
Issued
2020-06-30T12:00:00+00:00
Version Information
REC/2020/09
Version URI
http://purl.allotrope.org/voc/afo/perspective/REC/2020/09/system
Imports
http://purl.allotrope.org/voc/afo/REC/2019/12/curation
http://purl.allotrope.org/voc/bfo/REC/2018/04/bfo-2-0
License & Rights
http://purl.allotrope.org/voc/creative-commons-attribution-license
http://purl.allotrope.org/voc/attribution
Ontology RDF
RDF (turtle)

Description

Allotrope Foundation Taxonomy of materials, roles and functions under a system perspective

Table of Contents

  1. Classes
  2. Datatype Properties
  3. Named Individuals
  4. Namespaces
  5. Legend

Overview

Pictures say 1,000 words
Figure 1: Ontology overview

Classes

device systemc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0000074
Description

An artificial system that is mainly composed of devices. [Allotrope]

Super-classes af-e:AFE_0002158c
Sub-classes af-e:AFE_0002153c
af-e:AFE_0002141c

pressure sensorc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0000327
Description

A sensor that measures the pressure. [Allotrope]

Super-classes af-e:AFE_0002184c

devicec # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0000354
Super-classes af-e:AFE_0002099c
Sub-classes af-e:AFE_0002184c

sample inletc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0000462
Description

A sample inlet is an in port of a measurement or separation device where sample material is passing in to the device. [Allotrope]

Super-classes af-e:AFE_0002190c

portc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0000847
Description

Connection point of a system through which flows material, energy or information. [Allotrope]

Example(s)
A port is used to transfer sample from a sample container to the sample measuring device or instrument. [Allotrope]

Super-classes cdao:BFO_0000024c
Sub-classes af-e:AFE_0002190c
af-e:AFE_0002191c
af-e:AFE_0002192c

artifactc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0002099
Super-classes af-m:AFM_0000275c
Sub-classes af-e:AFE_0000354c

measuring systemc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0002141
Description

A measuring system is a device system which has the designed function of measurement. [Allotrope]

Super-classes af-e:AFE_0000074c

plumbing systemc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0002153
Description

Plumbing is the system of pipes, tubing, drains, fittings, valves, and fixtures installed for the distribution of a liquid. [Wikipedia]

Super-classes af-e:AFE_0000074c

artificial systemc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0002158
Description

A system that is created for a specific purpose. [Allotrope]

Super-classes cdao:RO_0002577c
Sub-classes af-e:AFE_0000074c
af-e:AFE_0002232c

sensorc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0002184
Source https://jcgm.bipm.org/vim/en/3.8.html
Description

A sensor is a component of a measuring system that is directly affected by a phenomenon, body, or substance carrying a quantity to be measured. [Allotrope]

Super-classes af-e:AFE_0000354c
Sub-classes af-e:AFE_0000327c

in portc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0002190
Description

An in port is a port in a device where material is flowing into the system boundary. [Allotrope]

Super-classes af-e:AFE_0000847c
Sub-classes af-e:AFE_0000462c

out portc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0002191
Description

An out port is a port in a device where material is flowing out of the system boundary. [Allotrope]

Super-classes af-e:AFE_0000847c

in/out portc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0002192
Description

An in/out port is a port where a flow is going in both directions. [Allotrope]

Super-classes af-e:AFE_0000847c

data systemc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0002232
Super-classes af-e:AFE_0002158c
Sub-classes af-e:AFE_0002234c

laboratory information management systemc # Classes

URI http://purl.allotrope.org/ontologies/equipment#AFE_0002234
Source https://en.wikipedia.org/wiki/Laboratory_information_management_system
Description

A laboratory information management system is a data system used in laboratories to manage laboratory operations. [Allotrope]

Super-classes af-e:AFE_0002232c

materialc # Classes

URI http://purl.allotrope.org/ontologies/material#AFM_0000275
Super-classes cdao:BFO_0000040c
Sub-classes af-e:AFE_0002099c

natural systemc # Classes

URI http://purl.allotrope.org/ontologies/material#AFM_0001059
Description

A system that can be discovered in nature. [Allotrope]

Super-classes cdao:RO_0002577c

signalc # Classes

URI http://purl.allotrope.org/ontologies/result#AFR_0001004
Source https://en.wikipedia.org/wiki/Signal
Description

An information content entity that is an input or output in a process at the boundary of a system. The signal is sent or received via ports of the system. The signal conveys information about the behavior or attributes of some phenomenon. [Allotrope]

Super-classes cdao:IAO_0000030c
Sub-classes af-r:AFR_0001964c

noisec # Classes

URI http://purl.allotrope.org/ontologies/result#AFR_0001170
Source https://en.wikipedia.org/wiki/Noise_(electronics)
Description

An information content entity that describes the unwanted random and systematic fluctuations to the signal that limit the ability to detect a signal contribution of interest. [Allotrope]

Super-classes cdao:IAO_0000030c

signal (communication)c # Classes

URI http://purl.allotrope.org/ontologies/result#AFR_0001964
Description

A signal is information transported over an communication channel. [Allotrope]

Super-classes af-r:AFR_0001004c

port rolec # Classes

URI http://purl.allotrope.org/ontologies/role#AFRL_0000083
Description

A site that is part of a system has the port role if a component is connected to other components or systems at the site and material or energy can flow at the site. [Allotrope]

Super-classes cdao:BFO_0000023c
Sub-classes af-rl:AFRL_0000147c
af-rl:AFRL_0000148c

component rolec # Classes

URI http://purl.allotrope.org/ontologies/role#AFRL_0000096
Description

An granular part of an object aggregate that plays the role of a system. [Allotrope]

Super-classes cdao:BFO_0000023c

system rolec # Classes

URI http://purl.allotrope.org/ontologies/role#AFRL_0000101
Description

A role of an object aggregate that consists of multiple components that are causally integrated. [Allotrope]

Super-classes cdao:BFO_0000023c
Sub-classes af-rl:AFRL_0000102c

subsystem rolec # Classes

URI http://purl.allotrope.org/ontologies/role#AFRL_0000102
Description

Parts of a system that are a building a system on its own. [Allotrope]

Super-classes af-rl:AFRL_0000101c

system bond rolec # Classes

URI http://purl.allotrope.org/ontologies/role#AFRL_0000146
Description

A system bond is the role of a site where two components are connected via their ports. At this site energy or material can flow. [Allotrope]

Super-classes cdao:BFO_0000023c

out-port rolec # Classes

URI http://purl.allotrope.org/ontologies/role#AFRL_0000147
Description

A role of a site where material or energy is outgoing from the component. [Allotrope]

Super-classes af-rl:AFRL_0000083c

in-port rolec # Classes

URI http://purl.allotrope.org/ontologies/role#AFRL_0000148
Description

A role of a site where material or energy is incoming into the component. [Allotrope]

Super-classes af-rl:AFRL_0000083c

physical signal rolec # Classes

URI http://purl.allotrope.org/ontologies/role#AFRL_0000159
Description

A signal is a role of some material entity that disposed to provide information. In the physical world, any quantity exhibiting variation in time or variation in space (such as an image) is potentially a signal that might provide information on the status of a physical system, or convey a message between observers, among other possibilities. [Allotrope, Wikipedia]

Super-classes cdao:BFO_0000023c
Sub-classes af-rl:AFRL_0000276c
af-rl:AFRL_0000335c
af-rl:AFRL_0000275c

initial responsec # Classes

URI http://purl.allotrope.org/ontologies/role#AFRL_0000275
Description

The initial response is the role of an outgoing signal as it was generated raw without signal processing from a processing component. [Allotrope]

Super-classes af-rl:AFRL_0000159c

primary responsec # Classes

URI http://purl.allotrope.org/ontologies/role#AFRL_0000276
Description

The primary response is the role of an outgoing signal that serves the intended main function of the system. [Allotrope]

Super-classes af-rl:AFRL_0000159c

reference signalc # Classes

URI http://purl.allotrope.org/ontologies/role#AFRL_0000335
Description

Reference signal is the role of a signal that relates to another signal as reference for comparison. [Allotrope]

Super-classes af-rl:AFRL_0000159c

IAO_0000030c # Classes

URI http://purl.obolibrary.org/obo/IAO_0000030
Super-classes cdao:BFO_0000031c
Sub-classes af-r:AFR_0001170c
af-r:AFR_0001004c

systemc # Classes

URI http://purl.obolibrary.org/obo/RO_0002577
Description

A material entity consisting of multiple components that are causally integrated. [RO]

Super-classes cdao:BFO_0000040c
Sub-classes af-e:AFE_0002158c
af-m:AFM_0001059c

Organizationc # Classes

URI http://xmlns.com/foaf/0.1/Organization
Members http://www.allotrope.org

Datatype Properties

namedp # DPs

URI http://xmlns.com/foaf/0.1/name

Named Individuals

Derivative works attributionni

URI http://purl.allotrope.org/voc/attribution
Description These taxonomies contain material or may constitute derivative works of material which may be subject to copyright by one of the following organizations. By using these taxonomies, you agree to the following terms and conditions applicable to its contents: ****************************************************************************** Attribution Notice for National Center for Biomedical Ontology materials. This work contains material from the Cell Ontology and Clinical Measurement Ontology, available here: http://bioportal.bioontology.org/. ****************************************************************************** Attribution Notice for ChEBI This work contains material from the European Bioinformatics Institute’s ChEBI database. ****************************************************************************** Attribution Notice for Quantities Units Dimensions Data Types (http://www.qudt.org/) This work contains content from www.qudt.org and is used pursuant to a Creative Commons License available here: http://creativecommons.org/licenses/by-sa/3.0/us/legalcode. The original work may have been modified. ****************************************************************************** Copyright and Attribution Notice for Dublin Core Metadata Initiative Document This work contains material from the following DCMI document used pursuant to a creative commons license available here: https://creativecommons.org/licenses/by/4.0/legalcode. This material may have been modified or changed. Timestamped URL: http://dublincore.org/documents/2012/06/14/dcmi-terms/ Date Issued: 2012-06-14 Document Status: This is a DCMI Recommendation. Copyright © 1995-2015 DCMI. All Rights Reserved. DCMI liability, trademark/service mark, document use and software licensing rules apply. ******************************************************************************

Copyright © 2015-2020 Allotrope Foundationni

URI http://purl.allotrope.org/voc/copyright
Description Copyright © 2015-2020 Allotrope Foundation

Creative Commons Attribution 4.0 International Public Licenseni

URI http://purl.allotrope.org/voc/creative-commons-attribution-license
Description This work is licensed under a Creative Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/. THESE MATERIALS ARE PROVIDED "AS IS" AND ALLOTROPE EXPRESSLY DISCLAIMS ALL WARRANTIES, EXPRESS, IMPLIED OR STATUTORY, INCLUDING, WITHOUT LIMITATION, THE WARRANTIES OF NON-INFRINGEMENT, TITLE, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. Copyright © 2015-2020 Allotrope Foundation

Noneni

Class(es)
foaf:Organization
URI http://www.allotrope.org

Namespaces

default (:)
http://purl.allotrope.org/voc/afo/perspective/REC/2020/09/system
af-c
http://purl.allotrope.org/ontologies/common#
af-cq
http://purl.allotrope.org/ontologies/common/qualifier#
af-cur
http://purl.allotrope.org/ontologies/curation#
af-e
http://purl.allotrope.org/ontologies/equipment#
af-ec-001
http://purl.allotrope.org/ontologies/equipment/codelist/001#
af-ec-002
http://purl.allotrope.org/ontologies/equipment/codelist/002#
af-ec-003
http://purl.allotrope.org/ontologies/equipment/codelist/003#
af-ec-004
http://purl.allotrope.org/ontologies/equipment/codelist/004#
af-ec-005
http://purl.allotrope.org/ontologies/equipment/codelist/005#
af-ec-006
http://purl.allotrope.org/ontologies/equipment/codelist/006#
af-fn
http://purl.allotrope.org/ontologies/function#
af-m
http://purl.allotrope.org/ontologies/material#
af-map
http://purl.allotrope.org/ontologies/mapping#
af-math
http://purl.allotrope.org/ontologies/math#
af-p
http://purl.allotrope.org/ontologies/process#
af-q
http://purl.allotrope.org/ontologies/quality#
af-r
http://purl.allotrope.org/ontologies/result#
af-re
http://purl.allotrope.org/ontologies/realizable#
af-rl
http://purl.allotrope.org/ontologies/role#
af-x
http://purl.allotrope.org/ontologies/property#
afs-c
http://purl.allotrope.org/shapes/common#
afs-dc
http://purl.allotrope.org/shapes/datacube#
afs-hr
http://purl.allotrope.org/shapes/resources#
afs-q
http://purl.allotrope.org/shapes/qudt#
bfo
http://purl.obolibrary.org/obo/BFO
cdao
http://purl.obolibrary.org/obo/
chebi
http://purl.obolibrary.org/obo/CHEBI
chmo
http://purl.obolibrary.org/obo/CHMO
dct
http://purl.org/dc/terms/
envo
http://purl.obolibrary.org/obo/ENVO
foaf
http://xmlns.com/foaf/0.1/
formats
http://www.w3.org/ns/formats/
iao
http://purl.obolibrary.org/obo/IAO
obi
http://purl.obolibrary.org/obo/OBI
ops
http://www.openphacts.org/units/
ore
http://www.openarchives.org/ore/terms/
org
http://www.w3.org/ns/org#
owl
http://www.w3.org/2002/07/owl#
pato
http://purl.obolibrary.org/obo/PATO
pav
http://purl.org/pav/
prov
http://www.w3.org/ns/prov#
qudt
http://qudt.org/schema/qudt#
rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#
rdfs
http://www.w3.org/2000/01/rdf-schema#
ro
http://purl.obolibrary.org/obo/RO
sdo
https://schema.org/
sio
http://semanticscience.org/resource/
skos
http://www.w3.org/2004/02/skos/core#
time
http://www.w3.org/2006/time#
void
http://rdfs.org/ns/void#
xsd
http://www.w3.org/2001/XMLSchema#

Legend

cClasses
opObject Properties
fpFunctional Properties
dpData Properties
dpAnnotation Properties
pProperties
niNamed Individuals