Matures in the bone marrow and account for <1% of leukocytes in the peripheral blood, spleen, and bone marrow. Basophils are described as being CD11a-positive, CD11b-positive, CD13-positive, CD15-positive, CD18-positive, CD21-positive, CD25-positive, CD29-positive, CD35-positive, CD40-positive, CD40L-positive, CD44-positive, CD45R-negative, CD46-positive, CD49a-positive, CD49b-positive, CD49d-positive, CD55-positive, CD59-positive, CD62L-positive, CD63-positive, CD69-positive, CD90-negative, CD116-positive, CD117-negative, CD124-positive, CD125-positive, CD131-positive, CD161-positive, CD184-positive, CD191-positive, CD192-positive, CD197-positive, CD200R3-positive, CD218-positive, CD282-positive, CD284-positive, CD289-positive, CD290-positive, CD294-positive, natural killer cell receptor 2B4-positive, smad1-positive, CD3-negative, CD4-negative, CD7-negative, CD8-negative, CD14-negative, CD15-negative, CD16-negative, CD19-negative, CD20-negative, CD34-negative, CD36-negative, CD45R-negative, CD56-negative, CD57-negative, CD235a-negative, and GR1-negative. Transcription factors- GATA1-positive, PU.1-positive.

is equivalent to: granulocyte^c and (has plasma membrane part^op some ectonucleotide pyrophosphatase/phosphodiesterase family member 3^c) and (has plasma membrane part^op some tumor necrosis factor ligand superfamily member 5^c) and (has_high_plasma_membrane_amount^op some C-C chemokine receptor type 3^c) and (has_high_plasma_membrane_amount^op some interleukin-3 receptor class 2 alpha chain^c) and (has_high_plasma_membrane_amount^op some high affinity immunoglobulin epsilon receptor subunit alpha^c)
has super-classes: granulocyte^c; has_high_plasma_membrane_amount^op some C-C chemokine receptor type 3^c; has plasma membrane part^op some tumor necrosis factor ligand superfamily member 5^c; has_high_plasma_membrane_amount^op some interleukin-3 receptor class 2 alpha chain^c; has plasma membrane part^op some ectonucleotide pyrophosphatase/phosphodiesterase family member 3^c; has_high_plasma_membrane_amount^op some high affinity immunoglobulin epsilon receptor subunit alpha^c

basophilic^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002094

has super-classes: affinity^c

basophilic cytoplasm^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CP_0000028

is equivalent to: cytoplasm^c and (bearer of^op some basophilic^c)
has super-classes: cytoplasm^c; bearer of^op some basophilic^c

basophilic erythroblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000549

is equivalent to: erythroblast^c and (has part^op some basophilic cytoplasm^c) and (has part^op some heterochromatin^c) and (has plasma membrane part^op some transferrin receptor protein 1^c)
has super-classes: erythroblast^c; has part^op some basophilic cytoplasm^c; has part^op some heterochromatin^c; has plasma membrane part^op some transferrin receptor protein 1^c; develops from^op some proerythroblast^c

benzopyrrole^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_22728

has super-classes: organic heterobicyclic compound^c; heteroarene^c; organonitrogen heterocyclic compound^c
has sub-classes: indoles^c

BETA-TC-3 cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0001932

has super-classes: immortal cell line cell^c

bicarbonate transmembrane transporter activity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0015106

has super-classes: molecular_function^c

biconcave^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002039

has super-classes: concave^c

bile duct^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002394

has super-classes: digestive system duct^c; endoderm-derived structure^c

binding^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001588

has super-classes: biological_process^c

binding assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001146

is equivalent to: assay^c and (has_specified_output^op some binding datum^c)
has super-classes: assay^c; has_specified_output^op some binding datum^c
has sub-classes: transcription factor binding site identification^c

binding datum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001181

is equivalent to: data item^c and (is about^op some binding^c)
has super-classes: data item^c

biodiversity assessment objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001969

has super-classes: biological feature identification objective^c

biogenic amine secreting cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000457

has super-classes: endocrine cell^c
has sub-classes: serotonin secreting cell^c

biological adhesion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0022610

has super-classes: biological_process^c
has sub-classes: single organism cell adhesion^c

biological feature identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000015

has super-classes: objective specification^c
has sub-classes: biodiversity assessment objective^c, cellular feature identification objective^c, characterization of pancreas development and growth objective^c, molecular feature identification objective^c, organism feature identification objective^c, sequence feature identification objective^c, tissue expression survey objective^c

biological regulation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0065007

has super-classes: biological_process^c
has sub-classes: regulation of biological process^c, regulation of biological quality^c, regulation of molecular function, epigenetic^c

biological replicate role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000198

has super-classes: reference subject role^c

biological sex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000047

has super-classes: organismal quality^c
has sub-classes: mating type^c, phenotypic sex^c

biological vector role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000109

has super-classes: material to be added role^c
has sub-classes: cloning vector role^c

biological_process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0008150

has super-classes: process^c
has sub-classes: binding^c, biological adhesion^c, biological regulation^c, cell motility^c, cellular component organization^c, cellular process^c, developmental process^c, disease course^c, disease stage^c, epigenetic modification process^c, fasting^c, hormone secretion^c, immune system process^c, life cycle stage^c, localization^c, metabolic process^c, multi-organism process^c, multicellular organismal process^c, pathologic process^c, reproductive process^c, response to stimulus^c, single-organism process^c, stress and apoptosis in islets or beta cells^c

biological_region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001411

has super-classes: region^c
has sub-classes: QTL^c, gene^c, gene_member_region^c, gene_segment^c, heritable_phenotypic_marker^c, polypeptide^c, pseudogene^c, pseudogenic_region^c

biomacromolecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33694

has super-classes: polyatomic entity^c; organic molecular entity^c
has sub-classes: polynucleotide^c, polysaccharide^c

biomaterial purity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001339

has super-classes: composition^c

biopsy^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ERO_0001334

has super-classes: collecting specimen from organism^c

biosynthetic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0009058

has super-classes: metabolic process^c
has sub-classes: cellular biosynthetic process^c, organic substance biosynthetic process^c

biotin^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_15956

has super-classes: biotins^c

biotins^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_51570

has super-classes: primary amide^c; carboxylic acid^c; azabicycloalkane^c; thiabicycloalkane^c
has sub-classes: biotin^c

bisulfite sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000748

has super-classes: DNA sequencing^c; DNA methylation profiling by high throughput sequencing assay^c; has_specified_output^op some measurement datum^c and (is about^op some DNA residue methylation^c); has_specified_input^op some deoxyribonucleic acid^c and (has role^op some evaluant role^c); has_specified_output^op some DNA sequence data^c and (is about^op some regulation of DNA methylation^c); has participant^op some DNA sequencer^c; achieves_planned_objective^op some epigenetic modification identification objective^c; realizes^op some reagent role^c and (inheres in^op some hydrogensulfite^c); has part^op some DNA sequencing^c
has sub-classes: reduced representation bisulfite sequencing assay^c, shotgun bisulfite-seq assay^c

bit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000232

has super-classes: measurement unit label^c

Black and tan, brachyury mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000105

has super-classes: mouse strain^c

black swiss mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000031

has super-classes: mouse strain^c; has_genetic_background_of^op some genetic population background information^c and (is about^op some C57BL/6 mouse strain^c)

bladder organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0018707

has super-classes: cavitated compound organ^c; sac^c
has sub-classes: gall bladder^c, urinary bladder^c

blood^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000178

has super-classes: organism substance^c

blood cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000081

is equivalent to: hematopoietic cell^c and (capable of^op some blood circulation^c)
has super-classes: hematopoietic cell^c; capable of^op some blood circulation^c
has sub-classes: erythrocyte^c, granulocyte^c, platelet^c

blood circulation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0008015

has super-classes: circulatory system process^c

blood coagulation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0007596

has super-classes: single-multicellular organism process^c; regulation of body fluid levels^c

blood vessel^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001981

has super-classes: anatomical conduit^c; mesoderm-derived structure^c
has sub-classes: aorta^c, arterial blood vessel^c, pharyngeal arch artery^c, respiratory system arterial blood vessel^c, umbilical vein^c, vein^c

blood vessel endothelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000071

is equivalent to: squamous epithelial cell^c and (part of^op some blood vessel endothelium^c)
has super-classes: squamous epithelial cell^c; endothelial cell of vascular tree^c; part of^op some blood vessel endothelium^c; develops from^op some embryonic blood vessel endothelial progenitor cell^c
has sub-classes: endothelial cell of artery^c

blood vessel endothelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004638

has super-classes: cardiovascular system endothelium^c
has sub-classes: aorta endothelium^c, endothelium of artery^c

bone cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0001035

is equivalent to: animal cell^c and (part of^op some bone element^c)
has super-classes: animal cell^c; part of^op some bone element^c
has sub-classes: bone marrow cell^c

bone element^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001474

has super-classes: skeletal element^c
has sub-classes: bone of appendage girdle complex^c, dermal bone^c, endochondral bone^c, femur^c, head bone^c, limb long bone^c, mandible^c

bone marrow^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002371

has super-classes: hemopoietic tissue^c

bone marrow cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002092

MH consider whether bone marrow cells are bone cells in the structural sense vs. being part of bone organ sense.

is equivalent to: bone cell^c and (part of^op some bone marrow^c)
has super-classes: bone cell^c; part of^op some bone marrow^c
has sub-classes: bone marrow hematopoietic cell^c

bone marrow hematopoietic cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_1001610

is equivalent to: hematopoietic cell^c and (part of^op some bone marrow^c)
has super-classes: hematopoietic cell^c; bone marrow cell^c; part of^op some bone marrow^c; part of^op some hemopoietic tissue^c
has sub-classes: granulocyte monocyte progenitor cell^c, megakaryocyte^c

bone of appendage girdle complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0010740

has super-classes: bone element^c
has sub-classes: bone of free limb or fin^c, hindlimb bone^c

bone of free limb or fin^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004375

has super-classes: mesoderm-derived structure^c; bone of appendage girdle complex^c
has sub-classes: limb bone^c

bone of jaw^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0012360

has super-classes: facial bone^c; digestive system element^c
has sub-classes: bone of lower jaw^c

bone of lower jaw^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004768

has super-classes: endoderm-derived structure^c; bone of jaw^c
has sub-classes: dentary^c

brain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000955

has super-classes: organ^c; ectoderm-derived structure^c

brain gray matter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003528

has super-classes: gray matter^c
has sub-classes: basal ganglion^c, gray matter of telencephalon^c

brain ventricle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004086

has super-classes: organ part^c; brain ventricle/choroid plexus^c
has sub-classes: telencephalic ventricle^c

brain ventricle/choroid plexus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003947

has super-classes: ectoderm-derived structure^c; multicellular anatomical structure^c
has sub-classes: brain ventricle^c

branched duct epithelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000069

has super-classes: duct epithelial cell^c
has sub-classes: cholangiocyte^c

bronchial epithelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002328

is equivalent to: epithelial cell^c and (part of^op some bronchus^c)
has super-classes: epithelial cell of tracheobronchial tree^c; part of^op some bronchus^c; part of^op some epithelium of bronchus^c

bronchus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002185

has super-classes: respiratory tube^c

brown adipose tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001348

has super-classes: adipose tissue^c

Burkitts lymphoma^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0000309

has super-classes: lymphoid neoplasm^c

BX129-Neurod1{tmAK71(lacZ)Jle/Mmcd} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000181

has super-classes: mouse strain^c

C-C chemokine receptor type 1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001254

has super-classes: chemokine receptor CCR1/3/1L^c

C-C chemokine receptor type 3^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001255

has super-classes: chemokine receptor CCR1/3/1L^c

C3H mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000030

has super-classes: mouse strain^c

C57/CBAJ-Hprt{tm3(Ins2-HBEGF)Ugfm} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000204

has super-classes: mouse strain^c

C57/CBAJ-Tg(Ins2- HBEGF){6832Ugfm} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000235

has super-classes: mouse strain^c

C57/CBAJ-TgN(Glucagon- hHB EGF)Ugfm mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000233

has super-classes: mouse strain^c

C57/CBAJ-TgN(Glucagon- rtTA)Ugfm mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000234

has super-classes: mouse strain^c

C57BL/6 mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000013

has super-classes: mouse strain^c

cadherin-5^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001444

has super-classes: protein^c

caecum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001153

has super-classes: digestive tract diverticulum^c

calcareous tooth^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001091

has super-classes: tooth-like structure^c; ectoderm-derived structure^c; structure with developmental contribution from neural crest^c

cancer^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0000311

has super-classes: neoplasm^c
has sub-classes: colorectal adenocarcinoma^c, lymphoid neoplasm^c

cancer cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/REO_0000383

has super-classes: cell^c
has sub-classes: insulinoma cell^c, pancreatic ductal adenocarcinoma cell^c

cap analysis of gene expression ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001674

has super-classes: transcription profiling assay^c; sequencing assay^c; has part^op some DNA sequencing^c; has participant^op some DNA sequencer^c; has_specified_output^op some sequence data^c and (is about^op some gene expression^c); has_specified_input^op some RNA extract^c; has part^op some reverse transcribed polymerase chain reaction^c; achieves_planned_objective^op some transcription profiling identification objective^c

carbohydrates and carbohydrate derivatives^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_78616

has super-classes: organooxygen compound^c
has sub-classes: N-glycosyl compound^c, polysaccharide^c

carbon oxoacid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_35605

has super-classes: hydroxides^c; organooxygen compound^c
has sub-classes: carboxylic acid^c

Carbon-copy chromosome conformation capture assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001919

has super-classes: sequencing assay^c; has_specified_output^op some DNA sequence data^c; has part^op some multiplex ligation-mediated amplification^c; achieves_planned_objective^op some chromosome conformation identification objective^c; has part^op some specific enzymatic cleavage^c; realizes^op some evaluant role^c and (role of^op some deoxyribonucleic acid^c); has part^op some cross linking^c; has part^op some DNA sequencing^c; has part^op some library preparation^c; has participant^op some DNA sequencer^c
has sub-classes: carbon-copy chromosome conformation capture assay followed by sequencing assay^c

carbon-copy chromosome conformation capture assay followed by sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002042

has super-classes: Carbon-copy chromosome conformation capture assay^c

carbonyl compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_36586

has super-classes: organooxygen compound^c; organic molecule^c
has sub-classes: carboxylic acid^c

carboxamide^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_37622

has super-classes: primary amide^c; organonitrogen compound^c; organooxygen compound^c
has sub-classes: peptide^c

carboxylic acid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33575

has super-classes: carbon oxoacid^c; carbonyl compound^c; organic molecular entity^c
has sub-classes: biotins^c

carcinoembryonic antigen-related cell adhesion molecule 8^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001332

has super-classes: protein^c

cardiac muscle cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000746

This class encompasses the muscle cells responsible for heart* contraction in both vertebrates and arthropods. The ultrastucture of a wide range of arthropod heart cells has been examined including spiders, horseshoe crabs, crustaceans (see Sherman, 1973 and refs therein) and insects (see Lehmacher et al (2012) and refs therein). According to these refs, the cells participating in heart contraction in all cases are transversely striated. Insects hearts additionally contain ostial cells, also transversely striated muscle cells, but which do not participate in heart contraction.

is equivalent to: muscle cell^c and (part of^op some primary circulatory organ^c) and (has part^op some sarcomere^c) and (bearer of^op some transversely striated^c) and (participates in^op some heart contraction^c)
has super-classes: striated muscle cell^c; cardiocyte^c; has part^op some sarcomere^c; bearer of^op some transversely striated^c; participates in^op some heart contraction^c; part of^op some primary circulatory organ^c; develops from^op some cardiac muscle myoblast^c

cardiac muscle cell differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0055007

has super-classes: cell differentiation^c

cardiac muscle myoblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000513

is equivalent to: myoblast^c and (part of^op some cardiac muscle tissue^c) and (develops into^op some cardiac muscle cell^c)
has super-classes: cardiocyte^c; cardiac myoblast^c; part of^op some cardiac muscle tissue^c; develops into^op some cardiac muscle cell^c

cardiac muscle tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001133

has super-classes: striated muscle tissue^c; structure with developmental contribution from neural crest^c
has sub-classes: atrioventricular node^c

cardiac myoblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0010021

is equivalent to: myoblast^c and (develops into^op some cardiac muscle cell^c)
has super-classes: myoblast^c; develops into^op some cardiac muscle cell^c
has sub-classes: cardiac muscle myoblast^c

cardiocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002494

From Onard of the FMA: Cardiac muscle cell or cardiac myocyte is a striated muscle cell. Cardiocyte on the other hand is any cell in the heart which includes cells other than muscle cells (e.g. endothelial cell of endocardium). Unless there is a consensus among anatomists that cardiocytes refer only to muscle cells, we will treat them as a general class of cells in the heart.

is equivalent to: somatic cell^c and (part of^op some primary circulatory organ^c)
has super-classes: animal cell^c; somatic cell^c; part of^op some primary circulatory organ^c
has sub-classes: cardiac muscle cell^c, cardiac muscle myoblast^c

cardiovascular system endothelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004852

has super-classes: endothelium^c
has sub-classes: arterial system endothelium^c, blood vessel endothelium^c

catalytic activity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0003824

has super-classes: molecular_function^c
has sub-classes: RNA-directed DNA polymerase activity^c

catalytic complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_1902494

has super-classes: protein complex^c
has sub-classes: DNA polymerase complex^c

catecholamine secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0050432

has super-classes: secretion by cell^c; catecholamine transport^c

catecholamine transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0051937

has super-classes: monoamine transport^c; organic hydroxy compound transport^c
has sub-classes: catecholamine secretion^c

cation transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006812

has super-classes: ion transport^c
has sub-classes: ammonium transport^c, serotonin transport^c

caudate nucleus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001873

has super-classes: telencephalic nucleus^c

cavitated compound organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000489

has super-classes: compound organ^c
has sub-classes: bladder organ^c, kidney^c, spinal cord^c

cavity lining^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004457

has super-classes: anatomical entity^c; organ component layer^c
has sub-classes: pericardium^c, serous membrane^c

CCAAT/enhancer-binding protein alpha^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000005307

has super-classes: protein^c

CCE cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BTO_0003560

has super-classes: embryonic stem cell line^c

CD14 molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001889

has super-classes: protein^c

CD19 molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001002

has super-classes: protein^c

CD2 molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001083

has super-classes: protein^c

CD3 epsilon^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001020

has super-classes: protein^c

CD33 molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001892

has super-classes: protein^c

CD34 molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001003

has super-classes: protein^c

CD34-positive, CD38-negative hematopoietic stem cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0001024

Cell markers are associated with human hematopoietic stem cells. Originally described in the dendritic cell ontology (DC_CL:0000035)(PMID:19243617).

is equivalent to: hematopoietic stem cell^c and (has plasma membrane part^op some CD34 molecule^c) and (has plasma membrane part^op some prominin-1^c) and (has plasma membrane part^op some CD59-like glycoprotein^c) and (has plasma membrane part^op some Thy-1 membrane glycoprotein^c) and (lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c) and (lacks_plasma_membrane_part^op some ADP-ribosyl cyclase 1^c) and (lacks_plasma_membrane_part^op some low affinity immunoglobulin gamma Fc region receptor III^c) and (lacks_plasma_membrane_part^op some CD33 molecule^c) and (lacks_plasma_membrane_part^op some transferrin receptor protein 1^c)
has super-classes: hematopoietic stem cell^c; lacks_plasma_membrane_part^op some transferrin receptor protein 1^c; has plasma membrane part^op some prominin-1^c; lacks_plasma_membrane_part^op some low affinity immunoglobulin gamma Fc region receptor III^c; has plasma membrane part^op some CD59-like glycoprotein^c; lacks_plasma_membrane_part^op some ADP-ribosyl cyclase 1^c; has plasma membrane part^op some Thy-1 membrane glycoprotein^c; lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c; has plasma membrane part^op some CD34 molecule^c; lacks_plasma_membrane_part^op some CD33 molecule^c

CD34-positive, CD38-negative multipotent progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002043

Cell markers are associated with human hematopoietic multipotent progenitor cells.

is equivalent to: hematopoietic multipotent progenitor cell^c and (has plasma membrane part^op some CD34 molecule^c) and (lacks_plasma_membrane_part^op some receptor-type tyrosine-protein phosphatase C isoform CD45RA^c) and (lacks_plasma_membrane_part^op some ADP-ribosyl cyclase 1^c) and (lacks_plasma_membrane_part^op some Thy-1 membrane glycoprotein^c)
has super-classes: hematopoietic multipotent progenitor cell^c; develops from^op some CD34-positive, CD38-negative hematopoietic stem cell^c; lacks_plasma_membrane_part^op some receptor-type tyrosine-protein phosphatase C isoform CD45RA^c; lacks_plasma_membrane_part^op some Thy-1 membrane glycoprotein^c; has plasma membrane part^op some CD34 molecule^c; lacks_plasma_membrane_part^op some ADP-ribosyl cyclase 1^c

CD34-positive, CD38-positive common lymphoid progenitor^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0001021

These markers are associated with human common lymphoid progenitors. Originally described in the dendritic cell ontology (DC_CL:0000032)(PMID:19243617).

is equivalent to: common lymphoid progenitor^c and (has plasma membrane part^op some CD34 molecule^c) and (has plasma membrane part^op some receptor-type tyrosine-protein phosphatase C isoform CD45RA^c) and (has plasma membrane part^op some ADP-ribosyl cyclase 1^c) and (has plasma membrane part^op some neprilysin^c)
has super-classes: common lymphoid progenitor^c; CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor^c; has plasma membrane part^op some receptor-type tyrosine-protein phosphatase C isoform CD45RA^c; has plasma membrane part^op some CD34 molecule^c; develops from^op some CD34-positive, CD38-negative multipotent progenitor cell^c; has plasma membrane part^op some ADP-ribosyl cyclase 1^c; has plasma membrane part^op some neprilysin^c

CD34-positive, CD38-positive common myeloid progenitor^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0001026

Markers are associated with human cell type. Originally described in the dendritic cell ontology (DC_CL:0000038)(PMID:19243617).

is equivalent to: common myeloid progenitor, CD34-positive^c and (has plasma membrane part^op some ADP-ribosyl cyclase 1^c) and (has_low_plasma_membrane_amount^op some interleukin-3 receptor class 2 alpha chain^c) and (lacks_plasma_membrane_part^op some receptor-type tyrosine-protein phosphatase C isoform CD45RA^c) and (lacks_plasma_membrane_part^op some CD7 molecule^c) and (lacks_plasma_membrane_part^op some interleukin-5 receptor subunit alpha^c) and (lacks_plasma_membrane_part^op some neprilysin^c)
has super-classes: CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor^c; common myeloid progenitor, CD34-positive^c; has plasma membrane part^op some ADP-ribosyl cyclase 1^c; lacks_plasma_membrane_part^op some receptor-type tyrosine-protein phosphatase C isoform CD45RA^c; develops from^op some CD34-positive, CD38-negative multipotent progenitor cell^c; lacks_plasma_membrane_part^op some CD7 molecule^c; lacks_plasma_membrane_part^op some interleukin-5 receptor subunit alpha^c; lacks_plasma_membrane_part^op some neprilysin^c; has_low_plasma_membrane_amount^op some interleukin-3 receptor class 2 alpha chain^c

CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000995

Originally described in the dendritic cell ontology (DC_CL:1100000)(PMID:19243617).

is equivalent to: CD34-positive, CD38-positive common lymphoid progenitor^c or CD34-positive, CD38-positive common myeloid progenitor^c
has super-classes: hematopoietic oligopotent progenitor cell, lineage-negative^c; precursor cell^c
has sub-classes: CD34-positive, CD38-positive common lymphoid progenitor^c, CD34-positive, CD38-positive common myeloid progenitor^c

CD4 molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001004

has super-classes: protein^c

CD44 molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001307

has super-classes: protein^c

CD59-like glycoprotein^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001809

has super-classes: protein^c

CD69 molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001343

has super-classes: protein^c

CD7 molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001836

has super-classes: protein^c

CD7-negative lymphoid progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0001027

These markers are associated with human cells. Originally described in the dendritic cell ontology (DC_CL:0000039)(PMID:19243617).

is equivalent to: common lymphoid progenitor^c and (has plasma membrane part^op some CD34 molecule^c) and (lacks_plasma_membrane_part^op some receptor-type tyrosine-protein phosphatase C isoform CD45RA^c) and (lacks_plasma_membrane_part^op some CD7 molecule^c)
has super-classes: common lymphoid progenitor^c; CD7-negative lymphoid progenitor OR granulocyte monocyte progenitor^c; develops from^op some CD34-positive, CD38-positive common lymphoid progenitor^c; has plasma membrane part^op some CD34 molecule^c; lacks_plasma_membrane_part^op some CD7 molecule^c; lacks_plasma_membrane_part^op some receptor-type tyrosine-protein phosphatase C isoform CD45RA^c

CD7-negative lymphoid progenitor OR granulocyte monocyte progenitor^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0001012

Originally described in the dendritic cell ontology (DC_CL:1110000)(PMID:19243617).

is equivalent to: granulocyte monocyte progenitor cell^c or CD7-negative lymphoid progenitor cell^c
has super-classes: hematopoietic oligopotent progenitor cell, lineage-negative^c; precursor cell^c
has sub-classes: CD7-negative lymphoid progenitor cell^c, granulocyte monocyte progenitor cell^c

CD9 molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000005178

has super-classes: protein^c

cDNA library^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000164

has super-classes: recombinant vector^c; is_specified_output_of^op some recombinant vector cloning^c; has grain^op some recombinant vector^c

cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000000

The definition of cell is intended to represent all cells, and thus a cell is defined as a material entity and not an anatomical structure, which implies that it is part of an organism (or the entirety of one).

has super-classes: material entity^c
has sub-classes: cancer cell^c, cell in vitro^c, functional beta cell like cell^c, insulin expressing cell^c, native cell^c, pancreatic cell^c
is in range of: is about cell type^op

cell cluster^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0034922

has super-classes: multicellular anatomical structure^c
has sub-classes: ganglion^c, glandular acinus^c, islet of Langerhans^c

cell collecting^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001483

has super-classes: material component separation^c; achieves_planned_objective^op some material separation objective^c; has_specified_output^op some material entity^c and (has grain^op some cell^c); has_specified_input^op some cultured cell population^c

cell component comparison design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001205

has super-classes: study design^c; has part^op some cellular feature identification objective^c; has part^op some study design independent variable^c and (is about^op some cellular_component^c)

cell culture expansion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001147

has super-classes: material processing^c; (has_specified_input^op some cultured cell population^c) and (has_specified_output^op some cultured cell population^c); achieves_planned_objective^op some material transformation objective^c

cell culture splitting^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600037

An active cell culture is typically split when it has grown to confluence in its culture dish. Cell culture splitting of a cell culture sample results in an increase in its passage number, which measures how long a sample has been propagated in vitro, and therefore how many selective or genetic changes it is likely to have undergone.

has super-classes: material component separation^c; achieves_planned_objective^op some portioning objective^c; has_specified_output^op some cultured cell population^c; has_specified_input^op some cultured cell population^c

cell cycle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0007049

has super-classes: single-organism cellular process^c
has sub-classes: endomitotic cell cycle^c

cell cycle design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001409

has super-classes: study design^c; has part^op some cellular feature identification objective^c and (is about^op some cell cycle^c)

cell death^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0008219

has super-classes: single-organism process^c; single-organism cellular process^c
has sub-classes: apoptotic process^c

cell development^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0048468

has super-classes: anatomical structure development^c; cellular developmental process^c
has sub-classes: germ cell development^c

cell differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030154

has super-classes: cellular developmental process^c
has sub-classes: cardiac muscle cell differentiation^c, chondroblast differentiation^c, epithelial cell differentiation^c, fat cell differentiation^c, hematopoietic progenitor cell differentiation^c, leukocyte differentiation^c, myeloid cell differentiation^c, neuron differentiation^c, osteoblast differentiation^c, stem cell differentiation^c, transdifferentiation^c

cell differentiation design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001429

has super-classes: study design^c; has part^op some cellular feature identification objective^c and (is about^op some cellular developmental process^c)

cell freezing medium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001912

has super-classes: processed material^c

cell in vitro^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0001034

'In vitro', translating literally to 'in glass', typically refers to a controlled, often sterile, laboratory setting where cells or other specimens are placed by some agent for the purpose of studying or manipulating them as part of some research investigation. 'In vitro' is intended to contrast with 'native',which refers to cells or other biological entities that are found in a natural setting. It describes unicellular organisms removed from a natural environement and multicellular organism cells removed from an organism, or cells derived in culture from such displaced cells.

has super-classes: cell^c
has sub-classes: experimentally modified cell in vitro^c

cell line^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0000031

has super-classes: cultured cell population^c
has sub-classes: immortal cell line^c, stem cell derived cell line^c

cell line cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0000001

has super-classes: cultured cell^c
has sub-classes: immortal cell line cell^c
is in range of: is about cell line^op

cell lysate^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_1000036

has super-classes: processed material^c; is_specified_output_of^op some cell lysis^c; derives from^op some cell^c

cell lysis^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302894

has super-classes: killing^c; has_specified_input^op some cell^c or cultured cell population^c

cell migration^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0016477

has super-classes: cell motility^c
has sub-classes: ameboidal-type cell migration^c

cell motility^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0048870

has super-classes: biological_process^c; single-organism cellular process^c
has sub-classes: cell migration^c

cell part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044464

has super-classes: cellular_component^c
has sub-classes: intracellular part^c, plasma membrane part^c

cell permeabilization^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600033

has super-classes: material processing^c; has_specified_output^op some cell^c; achieves_planned_objective^op some material transformation objective^c; has_specified_input^op some cell^c

cell specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001468

has super-classes: specimen^c; has grain^op some cell^c; has role^op some specimen role^c

cell type comparison design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001411

has super-classes: study design^c; has part^op some study design independent variable^c and (is about^op some cell^c); has part^op some cellular feature identification objective^c

cellular aromatic compound metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006725

has super-classes: cellular metabolic process^c
has sub-classes: nucleobase-containing compound metabolic process^c

cellular biosynthetic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044249

has super-classes: biosynthetic process^c; cellular metabolic process^c
has sub-classes: cellular macromolecule biosynthetic process^c

cellular component organization^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0016043

has super-classes: biological_process^c
has sub-classes: DNA packaging^c, chromatin modification^c, organelle assembly^c, organelle organization^c

cellular developmental process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0048869

has super-classes: single-organism cellular process^c; single-organism developmental process^c
has sub-classes: cell development^c, cell differentiation^c

cellular feature identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000219

has super-classes: biological feature identification objective^c
has sub-classes: characterization of cell differentiation objective^c, characterization of cell stimulation or injury objective^c

cellular macromolecule biosynthetic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0034645

has super-classes: macromolecule biosynthetic process^c; cellular biosynthetic process^c; cellular macromolecule metabolic process^c
has sub-classes: DNA replication^c

cellular macromolecule metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044260

has super-classes: macromolecule metabolic process^c; cellular metabolic process^c
has sub-classes: DNA metabolic process^c, cellular macromolecule biosynthetic process^c, cellular protein metabolic process^c, macromolecule methylation^c

cellular marker expression^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000070

has super-classes: gene expression^c

cellular metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044237

has super-classes: metabolic process^c; cellular process^c
has sub-classes: cellular aromatic compound metabolic process^c, cellular biosynthetic process^c, cellular macromolecule metabolic process^c, cellular nitrogen compound metabolic process^c, heterocycle metabolic process^c

cellular nitrogen compound metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0034641

has super-classes: metabolic process^c; cellular metabolic process^c
has sub-classes: nucleobase-containing compound metabolic process^c

cellular potency^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001397

has super-classes: cellular quality^c
has sub-classes: multipotent^c, oligopotent^c, unipotent^c

cellular process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0009987

has super-classes: biological_process^c
has sub-classes: cellular metabolic process^c, organelle organization^c, single-organism cellular process^c

cellular process design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001365

has super-classes: study design^c; has part^op some cellular feature identification objective^c and (is about^op some cellular process^c)

cellular protein metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044267

has super-classes: protein metabolic process^c; cellular macromolecule metabolic process^c
has sub-classes: cellular protein modification process^c

cellular protein modification process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006464

has super-classes: protein modification process^c; cellular protein metabolic process^c
has sub-classes: histone modification^c

cellular quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001396

has super-classes: physical object quality^c
has sub-classes: cellular potency^c, nucleate quality^c, ploidy^c

cellular_component^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0005575

has super-classes: material entity^c
has sub-classes: cell part^c, macromolecular complex^c, membrane part^c, organelle^c, organelle membrane^c, organelle part^c

center calculation data transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200181

is equivalent to: (has_specified_output^op some center value^c) or (achieves_planned_objective^op some center calculation objective^c)
has super-classes: data transformation^c
has sub-classes: quantile transformation^c

center calculation objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200177

has super-classes: data transformation objective^c

center value^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000674

is equivalent to: is_specified_output_of^op some center calculation data transformation^c
has super-classes: data item^c

centimeter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000015

has super-classes: length unit^c

central nervous system cell part cluster^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0011215

has super-classes: multi cell part structure^c
has sub-classes: axon tract^c, cerebral cortex^c, cerebral peduncle^c, gray matter^c, nucleus of brain^c

centrally registered identifier^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000578

has super-classes: information content entity^c; has part^op some centrally registered identifier symbol^c; has part^op some denotes^op some centrally registered identifier registry^c

centrally registered identifier registry^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000579

has super-classes: data set^c

centrally registered identifier symbol^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000577

has super-classes: symbol^c; part of^op some centrally registered identifier^c
has sub-classes: ArrayExpress ID^c, GEO ID^c, PubMed ID^c, individual organism identifier^c

centrifugation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302886

has super-classes: material component separation^c; has participant^op some centrifuge^c; achieves_planned_objective^op some separation into different composition objective^c

centrifuge^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400106

has super-classes: measurement device^c; material separation device^c; has function^op some material separation function^c and (realized in^op only centrifugation^c); has function^op some measure function^c; has part^op some has function^op some contain function^c

cerebellum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002037

has super-classes: regional part of brain^c; structure with developmental contribution from neural crest^c

cerebral cortex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000956

has super-classes: multi cell part structure^c; central nervous system cell part cluster^c

cerebral hemisphere gray matter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005401

has super-classes: gray matter of telencephalon^c
has sub-classes: amygdala^c, frontal cortex^c

cerebral peduncle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002623

has super-classes: central nervous system cell part cluster^c

CGR8 cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0002405

has super-classes: immortal mouse embryo-derived cell line cell^c

chain termination sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000695

has super-classes: DNA sequencing by synthesis^c; has_specified_input^op some PCR product^c; has participant^op some ABI 377 automated sequencer^c or Li-Cor 4300 DNA Analysis System^c

chalcogen molecular entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33304

has super-classes: p-block molecular entity^c
has sub-classes: organochalcogen compound^c, oxygen molecular entity^c, sulfur molecular entity^c

characterization of cell differentiation objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000076

has super-classes: cellular feature identification objective^c
has sub-classes: characterization of differentiation of insulin-producing cells objective^c

characterization of cell stimulation or injury objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000080

has super-classes: cellular feature identification objective^c
has sub-classes: characterization of islet/beta-cell stimulation/injury objective^c

characterization of differentiation of insulin-producing cells objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000077

has super-classes: characterization of cell differentiation objective^c

characterization of islet/beta-cell stimulation/injury objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000078

has super-classes: characterization of cell stimulation or injury objective^c

characterization of pancreas development and growth objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000079

has super-classes: biological feature identification objective^c

chemical entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_24431

has super-classes: material entity^c
has sub-classes: atom^c, molecular entity^c

chemokine receptor CCR1/3/1L^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001197

has super-classes: protein^c
has sub-classes: C-C chemokine receptor type 1^c, C-C chemokine receptor type 3^c

chewing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NBO_0000073

has super-classes: multicellular organismal movement^c

ChIP-chip assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001248

Philippe Rocca-Serra

has super-classes: assay using chromatin immunoprecipitation^c; has_specified_output^op some information content entity^c and (is about^op some chromatin remodeling^c or regulation of molecular function, epigenetic^c or sequence-specific DNA binding^c or transcription factor binding site^c); has participant^op some DNA microarray^c; realizes^op some analyte role^c and (role of^op some deoxyribonucleic acid^c); has_specified_input^op some specimen^c and (has part^op some deoxyribonucleic acid^c) and (has part^op some protein complex^c); achieves_planned_objective^op some protein and DNA interaction identification objective^c; has part^op some immunoprecipitation^c
has sub-classes: ChIP-chip by tiling array assay^c, DNA methylation profiling by ChIP-chip assay^c, histone modification identification by ChIP-chip assay^c, transcription factor binding site identification by ChIP-chip assay^c

ChIP-chip by tiling array assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001419

has super-classes: ChIP-chip assay^c; has participant^op some tiling microarray^c

ChIP-chip by tiling array design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001417

has super-classes: ChIP-chip design^c; is concretized as^op some realized in^op only (has part^op some ChIP-chip by tiling array assay^c) and (has participant^op some tiling microarray^c)

ChIP-chip design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001403

has super-classes: protein binding site identification design^c; has part^op some study design independent variable^c and (is about^op some immunoglobulin complex, circulating^c); has part^op some protein and DNA interaction identification objective^c; is concretized as^op some realized in^op some (has part^op some ChIP-chip assay^c) and (has participant^op some DNA microarray^c)
has sub-classes: ChIP-chip by tiling array design^c

ChIP-seq assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000716

has super-classes: assay using chromatin immunoprecipitation^c; epigenetic modification assay^c; sequencing assay^c; has part^op some immunoprecipitation^c; has_specified_output^op some DNA sequence data^c; has participant^op some DNA sequencer^c; has part^op some library preparation^c; has_specified_output^op some information content entity^c and (is about^op some chromatin remodeling^c or regulation of molecular function, epigenetic^c or sequence-specific DNA binding^c or transcription factor binding site^c); achieves_planned_objective^op some epigenetic modification identification objective^c; has part^op some DNA sequencing^c; realizes^op some analyte role^c and (role of^op some deoxyribonucleic acid^c); has_specified_input^op some specimen^c and ((has part^op some deoxyribonucleic acid^c) and (has part^op some protein complex^c)); achieves_planned_objective^op some protein and DNA interaction identification objective^c
has sub-classes: chromatin immunoprecipitation with exonuclease sequencing assay^c, histone modification identification by ChIP-Seq assay^c, transcription factor binding site identification by ChIP-Seq assay^c

ChIP-seq design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001258

has super-classes: protein binding site identification design^c; is concretized as^op some realized in^op some (has part^op some ChIP-seq assay^c) and (has participant^op some DNA sequencer^c); has part^op some protein and DNA interaction identification objective^c; has part^op some epigenetic modification identification objective^c

cholangiocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_1000488

is equivalent to: branched duct epithelial cell^c and (part of^op some bile duct^c) and (capable of^op some bicarbonate transmembrane transporter activity^c)
has super-classes: branched duct epithelial cell^c; capable of^op some bicarbonate transmembrane transporter activity^c; part of^op some bile duct^c; develops from^op some hepatoblast^c
has sub-classes: pancreatic ductal cell^c

chondroblast differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0060591

has super-classes: cell differentiation^c

chromatin^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0000785

has super-classes: macromolecular complex^c; intracellular organelle part^c
has sub-classes: euchromatin^c, heterochromatin^c

chromatin immunoprecipitation with exonuclease sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001925

has super-classes: ChIP-seq assay^c; has part^op some specific enzymatic cleavage^c; has participant^op some sonicator^c; realizes^op some evaluant role^c and (role of^op some protein complex^c); has part^op some cross linking^c; has_specified_output^op some DNA sequence data^c

chromatin interaction analysis by paired-end tag sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001848

has super-classes: assay using chromatin immunoprecipitation^c; sequencing assay^c; has part^op some immunoprecipitation^c; has part^op some cross linking^c; achieves_planned_objective^op some analyte measurement objective^c; has_specified_input^op some protein complex^c and (has role^op some evaluant role^c); has part^op some DNA sequencing^c; has_specified_output^op some DNA sequence data^c; has part^op some paired-end library preparation^c; has participant^op some DNA sequencer^c; achieves_planned_objective^op some protein and DNA interaction identification objective^c

chromatin modification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0016568

has super-classes: cellular component organization^c
has sub-classes: chromatin remodeling^c, histone modification^c

chromatin remodeling^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006338

has super-classes: chromatin modification^c

chromosomal substitution^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001150

has super-classes: genetic transformation^c

chromosome condensation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030261

has super-classes: DNA metabolic process^c; DNA packaging^c; single-organism metabolic process^c; chromosome organization^c; single-organism organelle organization^c
has sub-classes: apoptotic chromosome condensation^c

chromosome conformation identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001917

has super-classes: molecular feature identification objective^c

chromosome organization^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0051276

has super-classes: organelle organization^c
has sub-classes: DNA packaging^c, chromosome condensation^c

chronic myelogenous leukemia^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0000339

has super-classes: leukemia^c; myeloid neoplasm^c

ciliary ganglion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002058

has super-classes: ganglion^c; parasympathetic ganglion^c

ciliated columnar epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0007592

has super-classes: epithelium^c; simple columnar epithelium^c
has sub-classes: pseudostratified ciliated columnar epithelium^c

cingulate gyrus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002967

has super-classes: gyrus^c

circular^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000411

has super-classes: elliptic^c

circular^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000988

has super-classes: polymer_attribute^c

circulatory system process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0003013

has super-classes: single-multicellular organism process^c
has sub-classes: blood circulation^c, heart contraction^c

class discovery data transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200175

is equivalent to: (has_specified_output^op some clustered data set^c) or (achieves_planned_objective^op some class discovery objective^c)
has super-classes: data transformation^c

class discovery objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200178

has super-classes: data transformation objective^c

clinical history^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OGMS_0000015

has super-classes: information content entity^c
has sub-classes: family history^c

clinical history design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001337

has super-classes: study design^c; has part^op some organism feature identification objective^c and (is about^op some clinical history^c)

clinical study design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500001

has super-classes: study design^c

cloning insert role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000416

has super-classes: role^c

cloning vector^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000737

is equivalent to: material entity^c and (has role^op some cloning vector role^c)
has super-classes: processed material^c; material to be added^c; is_specified_output_of^op some material processing^c

cloning vector role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000411

has super-classes: biological vector role^c; (inheres in^op some nucleic acid^c) and (realized in^op only recombinant vector cloning^c)

clustered data set^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000648

is equivalent to: is_specified_output_of^op some class discovery data transformation^c
has super-classes: data set^c

collecting specimen from organism^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600005

has super-classes: specimen collection process^c; achieves_planned_objective^op some specimen collection objective^c; has_specified_output^op some specimen^c; has_specified_input^op some organism^c
has sub-classes: biopsy^c

colon^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001155

has super-classes: subdivision of digestive tract^c

colony forming unit per milliliter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000213

has super-classes: concentration unit^c

colorectal adenocarcinoma^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0000365

has super-classes: cancer^c

common lymphoid progenitor^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000051

CLP are CD7-positive, CD10-positive, CD19-negative, CD34-positive, CD45RA-positive, CD79a-negative, CD127-positive, AA4.1-positive, RAG-negative, Sca-1-low, sIgM-negative, sIgD-negative, TdT-negative, Vpre-B-negative, and pre-BCR-negative. Expression of transcription factors include E2A-positive, EBF-positive, Ikaros-negative, PU.1-negative, and Pax5-negative.

is equivalent to: hematopoietic oligopotent progenitor cell^c and (capable of^op some lymphocyte differentiation^c)
has super-classes: hematopoietic oligopotent progenitor cell^c; precursor cell^c; capable of^op some lymphocyte differentiation^c
has sub-classes: CD34-positive, CD38-positive common lymphoid progenitor^c, CD7-negative lymphoid progenitor cell^c

common myeloid progenitor^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000049

This cell type is intended to be compatible with any vertebrate common myeloid progenitor. For mammalian CMP known to be CD34-positive, please use the term 'common myeloid progenitor, CD34-positive' (CL_0001059).

has super-classes: hematopoietic oligopotent progenitor cell^c
has sub-classes: common myeloid progenitor, CD34-positive^c

common myeloid progenitor, CD34-positive^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0001059

CMP are reportedly CD16-positive, CD32-positive, CD38-positive, CD45RA-negative, CD110-negative, CD117-positive, CD123-positive, and SCA1-negative.

is equivalent to: common myeloid progenitor^c and (has part^op some transcription factor PU.1^c) and (has part^op some CCAAT/enhancer-binding protein alpha^c) and (has part^op some erythroid transcription factor^c) and (has part^op some endothelial transcription factor GATA-2^c) and (has plasma membrane part^op some CD34 molecule^c) and (capable of^op some myeloid leukocyte differentiation^c) and (capable of^op some myeloid dendritic cell differentiation^c)
has super-classes: common myeloid progenitor^c; precursor cell^c; has part^op some endothelial transcription factor GATA-2^c; has part^op some erythroid transcription factor^c; capable of^op some myeloid leukocyte differentiation^c; has part^op some CCAAT/enhancer-binding protein alpha^c; capable of^op some myeloid dendritic cell differentiation^c; has plasma membrane part^op some CD34 molecule^c; has part^op some transcription factor PU.1^c
has sub-classes: CD34-positive, CD38-positive common myeloid progenitor^c

comparative genome hybridization by array design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001197

has super-classes: study design^c; has part^op some molecular feature identification objective^c; is concretized as^op some realized in^op some (has part^op some comparative genomic hybridization by array assay^c) and (has participant^op some DNA microarray^c)

comparative genomic hybridization by array assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001393

Philippe Rocca-Serra

has super-classes: genotyping assay^c; has_specified_input^op some specimen^c and (has part^op some deoxyribonucleic acid^c); realizes^op some analyte role^c and (role of^op some deoxyribonucleic acid^c); achieves_planned_objective^op some molecular feature identification objective^c; has_specified_output^op some genotype information^c; has participant^op some DNA microarray^c

complete nutrient role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000162

has super-classes: nutrient role^c
has sub-classes: feed role^c

composition^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000025

For example calcium composition (which may inhere in bone), haemoglobin composition (which may inhere in blood).

has super-classes: structure^c
has sub-classes: biomaterial purity^c

compound based treatment^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0000369

has super-classes: planned process^c

compound organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003103

has super-classes: organ^c
has sub-classes: cavitated compound organ^c, primary circulatory organ^c, respiratory tract^c

compound organ component^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000471

has super-classes: multi-tissue structure^c
has sub-classes: endocrine pancreas^c, medulla of thymus^c

compound treatment design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000951

is equivalent to: study design^c and (has part^op some study design independent variable^c and (is about^op some study intervention^c and administration of material to specimen^c))
has super-classes: intervention design^c
has sub-classes: dose response design^c

computer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400107

has super-classes: device^c; has function^op some information processor function^c

concave^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001857

has super-classes: concavity^c
has sub-classes: biconcave^c

concavity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002005

has super-classes: shape^c
has sub-classes: concave^c

concentrate^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600041

has super-classes: material component separation^c; achieves_planned_objective^op some separation into different composition objective^c

concentration datum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000097

is equivalent to: data item^c and (is about^op some concentration of^c)
has super-classes: data item^c

concentration of^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000033

has super-classes: molecular quality^c

concentration unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000051

has super-classes: measurement unit label^c
has sub-classes: colony forming unit per milliliter^c, mass percentage^c, mass volume percentage^c, pH^c, unit of molarity^c, volume per unit volume^c

conclusion based on data^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001909

has super-classes: information content entity^c; is_supported_by_data^op some data item^c; is_specified_output_of^op some drawing a conclusion based on data^c
is in domain of: is_supported_by_data^op

connective tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002384

has super-classes: tissue^c
has sub-classes: adipose tissue^c

connective tissue cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002320

is equivalent to: somatic cell^c and (part of^op some connective tissue^c)
has super-classes: animal cell^c; somatic cell^c; part of^op some connective tissue^c
has sub-classes: fat cell^c, fibroblast^c, mesenchymal stem cell^c

consume data function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000455

has super-classes: function^c; function of^op some material entity^c

contain function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000370

has super-classes: function^c

container^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000967

is equivalent to: has function^op some contain function^c
has super-classes: device^c
has sub-classes: flow cell^c, hybridization chamber^c, temperature control bath^c, thermal cycler^c

continuant^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000002

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: entity^c
has sub-classes: generically dependent continuant^c, independent continuant^c, specifically dependent continuant^c
is in domain of: participates in^op
is in range of: has participant^op
is disjoint with: occurrent^c

continuant fiat boundary^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000140

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: immaterial entity^c
has sub-classes: one-dimensional continuant fiat boundary^c, two-dimensional continuant fiat boundary^c, zero-dimensional continuant fiat boundary^c
is disjoint with: spatial region^c, site^c

contractile cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000183

has super-classes: native cell^c
has sub-classes: muscle cell^c

contractile fiber part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044449

has super-classes: organelle part^c; cytoplasmic part^c
has sub-classes: sarcomere^c

convex 3-D shape^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002007

Use this term or an is_a child of this term when the entire shape of the object is known.

has super-classes: 3-D shape^c; has_cross_section^op some 2-D shape^c
has sub-classes: cylindrical^c

cool function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000387

has super-classes: function^c

corpus callosum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002336

has super-classes: axon tract^c

correction objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200168

has super-classes: data transformation objective^c
has sub-classes: error correction objective^c

count unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000189

has super-classes: dimensionless unit^c

counts per minute^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000148

has super-classes: activity (of a radionuclide) unit^c

cross linking^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000800

has super-classes: material processing^c; achieves_planned_objective^op some material transformation objective^c; has_specified_output^op some molecular entity^c

cross over design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500003

has super-classes: repeated measure design^c
has sub-classes: n-to-1 design^c

cross-linking immunoprecipitation high-throughput sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001858

has super-classes: immunoprecipitation assay^c; sequencing assay^c; has participant^op some DNA sequencer^c; has part^op some library preparation^c; achieves_planned_objective^op some protein and RNA interaction identification objective^c; has part^op some RNA sequencing^c; has part^op some cross linking^c; has part^op some immunoprecipitation^c; has_specified_input^op some protein complex^c and (has role^op some evaluant role^c); achieves_planned_objective^op some analyte measurement objective^c; has participant^op some sonicator^c; has_specified_output^op some DNA sequence data^c
has sub-classes: individual-nucleotide resolution cross-linking and immunoprecipitation sequencing assay^c

cubic centimeter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000097

has super-classes: volume unit^c

culture medium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000079

has super-classes: processed material^c

cultured cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000010

Note that this class was re-labeled to 'cultured cell' instead of 'cell line cell', as it intent was clarified to cover any cultured cells of multicellular and unicellular organisms. This includes cells actively being cultured, or cells that have been cultured but are stored in a quiescent state for future use. In having been cultured, cells must establish homeostasis and often replicate in a foreign environment. Accomodation of this stress initiates a selection of cells fit for such challenges, wherein necessary adaptive biochemical and.or genetic changes can occur. These changes can set them apart from the in vivo cells from which they derive, and such changes will typically accumulate and change over increasing time in culture.

has super-classes: experimentally modified cell in vitro^c
has sub-classes: cell line cell^c, primary cultured cell^c, secondary cultured cell^c

cultured cell population^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0100060

The extent of a 'cultured cell population' is restricted only in that all cell members must share a propagation history (ie be derived through a common lineage of passages from an initial culture). In being defined in this way, this class can be used to refer to the populations that researchers actually use in the practice of science - ie are the inputs to culturing, experimentation, and sharing. The cells in such populations will be a relatively uniform population as they have experienced similar selective pressures due to their continuous co-propagation. And this population will also have a single passage number, again owing to their common passaging history. Cultured cell populations represent only a collection of cells (ie do not include media, culture dishes, etc), and include populations of cultured unicellular organisms or cultured multicellular organism cells. They can exist under active culture, stored in a quiescent state for future use, or applied experimentally.

has super-classes: processed material^c; has grain^op some cultured cell^c; is_specified_output_of^op some maintaining cell culture^c; has grain^op only cultured cell^c
has sub-classes: cell line^c, secondary cultured cell population^c

curation status specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000078

is equivalent to: { ready for release , metadata incomplete , example to be eventually removed , uncurated , pending final vetting , metadata complete , organizational term , requires discussion , to be replaced with external ontology term }
has super-classes: data about an ontology part^c
has members: example to be eventually removedⁿⁱ, requires discussionⁿⁱ, to be replaced with external ontology termⁿⁱ

curie^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000133

has super-classes: activity (of a radionuclide) unit^c

Cy3 dye^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_37987

has super-classes: indoles^c; cyanine dye^c

Cy5 dye^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_37989

has super-classes: indoles^c; cyanine dye^c

cyanine dye^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_37960

has super-classes: organonitrogen compound^c
has sub-classes: Cy3 dye^c, Cy5 dye^c

cyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33595

has super-classes: molecule^c
has sub-classes: heterobicyclic compound^c, heterocyclic compound^c, heteromonocyclic compound^c, heteropolycyclic compound^c, organic aromatic compound^c, organic cyclic compound^c

cylindrical^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001873

has super-classes: convex 3-D shape^c; has_cross_section^op some circular^c
has sub-classes: discoid^c

cytokine production^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0001816

has super-classes: single-multicellular organism process^c

cytometer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400137

has super-classes: measurement device^c; has function^op some measure function^c; (has part^op some light source^c) and (has part^op some optical filter^c) and (has part^op some photodetector^c)
has sub-classes: flow cytometer^c

cytoplasm^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0005737

has super-classes: intracellular part^c
has sub-classes: acidophilic cytoplasm^c, basophilic cytoplasm^c, neutrophillic cytoplasm^c, polychromatophilic cytoplasm^c

cytoplasmic membrane-bounded vesicle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0016023

has super-classes: cytoplasmic vesicle^c; membrane-bounded vesicle^c; intracellular membrane-bounded organelle^c
has sub-classes: melanosome^c, secretory granule^c

cytoplasmic part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044444

has super-classes: intracellular part^c
has sub-classes: contractile fiber part^c, cytoplasmic vesicle^c, cytoplasmic vesicle part^c, ribosome^c, vacuole^c

cytoplasmic RNA extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000876

has super-classes: RNA extract^c; is_specified_output_of^op some cytoplasmic RNA extraction^c

cytoplasmic RNA extraction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000859

has super-classes: RNA extraction^c

cytoplasmic vesicle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0031410

has super-classes: vesicle^c; intracellular organelle^c; cytoplasmic part^c
has sub-classes: cytoplasmic membrane-bounded vesicle^c

cytoplasmic vesicle membrane^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030659

has super-classes: organelle membrane^c; cytoplasmic vesicle part^c
has sub-classes: secretory granule membrane^c

cytoplasmic vesicle part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044433

has super-classes: cytoplasmic part^c; intracellular organelle part^c
has sub-classes: cytoplasmic vesicle membrane^c

Danio rerio^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_7955

has super-classes: Teleostei^c

data about an ontology part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000102

has super-classes: data item^c
has sub-classes: curation status specification^c, obsolescence reason specification^c

data analyst^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0001734

has super-classes: investigation agent role^c

data item^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000027

has super-classes: information content entity^c
has sub-classes: age datum^c, average value^c, binding datum^c, center value^c, concentration datum^c, data about an ontology part^c, data set^c, genetic characteristics information^c, measurement datum^c
is in range of: is_supported_by_data^op

data normalization objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200167

has super-classes: data transformation objective^c

data set^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000100

has super-classes: data item^c
has sub-classes: centrally registered identifier registry^c, clustered data set^c, gene list^c, normalized data set^c

data transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200000

is equivalent to: achieves_planned_objective^op some data transformation objective^c
has super-classes: planned process^c; has_specified_output^op only data item^c; has_specified_input^op only data item^c; realizes^op some concretizes^op some algorithm^c and (has part^op some objective specification^c); has_specified_input^op some data item^c; has_specified_output^op some data item^c
has sub-classes: averaging data transformation^c, center calculation data transformation^c, class discovery data transformation^c, differential expression analysis data transformation^c, error correction data transformation^c, feature extraction^c, high throughput sequence alignment^c, normalization data transformation^c, peak calling^c, scaling data transformation^c, sequence feature quantification^c

data transformation objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200166

has super-classes: objective specification^c
has sub-classes: averaging objective^c, center calculation objective^c, class discovery objective^c, correction objective^c, data normalization objective^c, differential expression analysis objective^c, feature extraction objective^c, scaling objective^c

database^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ERO_0001716

has super-classes: information content entity^c
is in range of: has external resource^op

datum label^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000009

has super-classes: information content entity^c
has sub-classes: measurement unit label^c

Daudi cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0002708

has super-classes: immortal cell line cell^c

day^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000033

has super-classes: time unit^c

dead^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001422

has super-classes: viability^c

deciliter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000209

has super-classes: volume unit^c

decision analysis study design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001965

is equivalent to: study design^c and (has part^op some decision-theoretic analysis objective^c)
has super-classes: study design^c

decision-theoretic analysis objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001964

has super-classes: objective specification^c

definitive endoderm^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005439

has super-classes: embryonic structure^c

degree Celsius^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000027

has super-classes: temperature unit^c

degree Fahrenheit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000195

has super-classes: temperature unit^c

dendritic cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000451

is equivalent to: leukocyte^c and (has part^op some MHC class II protein complex^c) and (capable of^op some cytokine production^c) and (capable of^op some antigen processing and presentation^c) and (capable of^op some regulation of T cell differentiation^c) and (lacks_plasma_membrane_part^op some CD19 molecule^c) and (lacks_plasma_membrane_part^op some CD34 molecule^c) and (lacks_plasma_membrane_part^op some CD3 epsilon^c) and (lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c) and (lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c)
has super-classes: leukocyte^c; capable of^op some antigen processing and presentation^c; lacks_plasma_membrane_part^op some CD3 epsilon^c; lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c; has part^op some MHC class II protein complex^c; lacks_plasma_membrane_part^op some CD34 molecule^c; capable of^op some regulation of T cell differentiation^c; lacks_plasma_membrane_part^op some CD19 molecule^c; lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c; capable of^op some cytokine production^c

dentary^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004742

has super-classes: mixed ectoderm/mesoderm/endoderm-derived structure^c; bone of lower jaw^c; dermal bone^c
has sub-classes: mandible^c

deoxyribonucleic acid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_16991

has super-classes: nucleic acid^c
has sub-classes: amplified DNA^c, double-stranded DNA^c

deoxyribonucleoside^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_23636

has super-classes: nucleoside^c
has sub-classes: 2'-deoxyribonucleoside^c, pyrimidine deoxyribonucleoside^c

dermal bone^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0008907

has super-classes: bone element^c; dermal skeletal element^c
has sub-classes: dentary^c

dermal skeletal element^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004756

has super-classes: mesoderm-derived structure^c; ectoderm-derived structure^c; skeletal element^c; structure with developmental contribution from neural crest^c
has sub-classes: dermal bone^c

detection of carbohydrate stimulus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0009730

has super-classes: response to carbohydrate^c; response to stimulus^c
has sub-classes: detection of monosaccharide stimulus^c

detection of glucose^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0051594

has super-classes: detection of hexose stimulus^c; response to hexose^c

detection of hexose stimulus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0009732

has super-classes: response to hexose^c; detection of monosaccharide stimulus^c
has sub-classes: detection of glucose^c

detection of monosaccharide stimulus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0034287

has super-classes: detection of carbohydrate stimulus^c; response to monosaccharide^c
has sub-classes: detection of hexose stimulus^c

developmental process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0032502

has super-classes: biological_process^c
has sub-classes: anatomical structure development^c, developmental process involved in reproduction^c, single-organism developmental process^c

developmental process involved in reproduction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0003006

has super-classes: reproductive process^c; developmental process^c
has sub-classes: germ cell development^c

deviation(from_normal)^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000069

has super-classes: qualitative^c
has sub-classes: increased quality^c, normal^c

device^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000968

has super-classes: processed material^c; is_specified_output_of^op some material processing^c; has function^op some function^c
has sub-classes: arrayer^c, assay array^c, computer^c, container^c, environmental control device^c, ion source^c, light emission device^c, liquid handler^c, material separation device^c, measurement device^c, perturbation device^c, syringe^c

device setting^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000654

has super-classes: quality^c; inheres in^op some processed material^c

diabetes mellitus^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0000400

has super-classes: disease^c
has sub-classes: type I diabetes mellitus^c, type II diabetes mellitus^c

diagnosis textual entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000075

has super-classes: textual entity^c

diaphragm^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001103

has super-classes: muscle organ^c; mesoderm-derived structure^c; thoracic segment organ^c

diazines^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_38313

has super-classes: organic heteromonocyclic compound^c; organonitrogen heterocyclic compound^c
has sub-classes: pyrimidine nucleoside^c

differential expression analysis data transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000650

is equivalent to: achieves_planned_objective^op some differential expression analysis objective^c
has super-classes: data transformation^c

differential expression analysis objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200031

has super-classes: data transformation objective^c

differential expression software^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000060

is equivalent to: software^c and (has part^op some differential expression analysis objective^c)
has super-classes: software^c; is concretized as^op some realized in^op some differential expression analysis data transformation^c
has sub-classes: Extraction of Differential Gene Expression software^c, Patterns from Gene Expression software^c

digestive gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0006925

has super-classes: endocrine gland^c; digestive system element^c
has sub-classes: liver^c

digestive system duct^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003928

has super-classes: duct^c
has sub-classes: bile duct^c, pancreatic duct^c

digestive system element^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0013765

has super-classes: organ^c
has sub-classes: bone of jaw^c, digestive gland^c, gall bladder^c, gland of gut^c, large intestine^c, small intestine^c, spleen^c, stomach^c, tongue^c, vermiform appendix^c

digestive tract diverticulum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0009854

has super-classes: subdivision of digestive tract^c; sac^c
has sub-classes: caecum^c

digit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002544

has super-classes: organism subdivision^c

dimensionless unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000186

has super-classes: measurement unit label^c
has sub-classes: count unit^c, pH^c, percent^c

diploid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001394

The exact number may be one or two different from the 2n number and still be classified as diploidy (although with aneuploidy). Nearly all mammals are diploid organisms, although all individuals have some small fracton of cells that are polyploidy.

has super-classes: euploid^c

directive information entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000033

has super-classes: information content entity^c; is about^op some realizable entity^c
has sub-classes: action specification^c, dose specification^c, objective specification^c, plan specification^c, study design controlled variable^c, study design dependent variable^c, study design independent variable^c

discoid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001874

has super-classes: cylindrical^c

disease^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OGMS_0000031

has super-classes: disposition^c
has sub-classes: asthma^c, diabetes mellitus^c, neoplasm^c, type I diabetes mellitus^c
is in range of: has disease^op

disease course^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OGMS_0000063

has super-classes: biological_process^c

disease stage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000278

has super-classes: biological_process^c; part of^op some disease course^c

disease state design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001293

has super-classes: study design^c; has part^op some study design independent variable^c and (is about^op some disease^c); has part^op some organism feature identification objective^c

disintegrations per minute^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000147

has super-classes: activity (of a radionuclide) unit^c

disposition^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000016

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: realizable entity^c
has sub-classes: disease^c, disposition to infect an organism^c, function^c
is disjoint with: role^c

disposition to infect an organism^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_1110093

has super-classes: disposition^c; realized in^op only infection^c

dissection^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001504

has super-classes: material processing^c; achieves_planned_objective^op some material transformation objective^c

Dll1{tm1Hri} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000246

has super-classes: mouse strain^c

DNA extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001051

has super-classes: nucleic acid extract^c; is_specified_output_of^op some DNA extraction^c; has grain^op some deoxyribonucleic acid^c
has sub-classes: high molecular weight DNA extract^c

DNA extraction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000257

has super-classes: nucleic acid extraction^c; has_specified_output^op some deoxyribonucleic acid^c

DNA ligase^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000023089

has super-classes: protein^c

DNA metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006259

has super-classes: cellular macromolecule metabolic process^c; nucleic acid metabolic process^c
has sub-classes: DNA modification^c, DNA replication^c, chromosome condensation^c, somatic diversification of immune receptors via germline recombination within a single locus^c

DNA methylation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006306

has super-classes: DNA modification^c; macromolecule methylation^c; regulation of macromolecule metabolic process^c

DNA methylation profiling assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000634

is equivalent to: has_specified_output^op some information content entity^c and (is about^op some regulation of DNA methylation^c)
has super-classes: analyte assay^c; epigenetic modification assay^c; achieves_planned_objective^op some epigenetic modification identification objective^c; realizes^op some analyte role^c and (role of^op some deoxyribonucleic acid^c); has_specified_input^op some specimen^c and (has part^op some deoxyribonucleic acid^c)
has sub-classes: DNA methylation profiling by array assay^c, DNA methylation profiling by high throughput sequencing assay^c, MeDIP-seq assay^c

DNA methylation profiling by array assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001332

Philippe Rocca-Serra

is equivalent to: DNA methylation profiling assay^c and (has participant^op some DNA microarray^c)
has super-classes: DNA methylation profiling assay^c

DNA methylation profiling by array design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001278

has super-classes: study design^c; is concretized as^op some realized in^op some (has part^op some DNA methylation profiling by array assay^c) and (has participant^op some DNA microarray^c); has part^op some epigenetic modification identification objective^c

DNA methylation profiling by ChIP-chip assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002014

has super-classes: ChIP-chip assay^c; epigenetic modification assay^c; has_specified_output^op some information content entity^c and (is about^op some DNA methylation^c); achieves_planned_objective^op some epigenetic modification identification objective^c

DNA methylation profiling by high throughput sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001266

Philippe Rocca-Serra

is equivalent to: DNA methylation profiling assay^c and (has participant^op some DNA sequencer^c)
has super-classes: DNA methylation profiling assay^c
has sub-classes: bisulfite sequencing^c, methylation-sensitive restriction enzyme sequencing assay^c

DNA methylation profiling by high throughput sequencing design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001435

has super-classes: study design^c; is concretized as^op some realized in^op some (has part^op some DNA methylation profiling by high throughput sequencing assay^c) and (has participant^op some DNA sequencer^c); has part^op some epigenetic modification identification objective^c

DNA microarray^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400148

has super-classes: microarray^c
has sub-classes: tiling microarray^c

DNA modification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006304

has super-classes: DNA metabolic process^c; macromolecule modification^c
has sub-classes: DNA methylation^c

DNA nucleotidylexotransferase^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000006611

has super-classes: protein^c

DNA packaging^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006323

has super-classes: cellular component organization^c; chromosome organization^c
has sub-classes: chromosome condensation^c

DNA polymerase complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0042575

has super-classes: intracellular part^c; catalytic complex^c

DNA replication^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006260

has super-classes: DNA metabolic process^c; cellular macromolecule biosynthetic process^c

DNA replication identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001916

has super-classes: molecular feature identification objective^c

DNA replication timing by sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001920

has super-classes: sequencing assay^c; achieves_planned_objective^op some DNA replication identification objective^c; realizes^op some evaluant role^c and (role of^op some deoxyribonucleic acid^c); has part^op some DNA sequencing^c; has_specified_output^op some DNA sequence data^c; has part^op some immunoprecipitation^c; has_specified_input^op some 5-bromo-2'-deoxyuridine^c; has participant^op some DNA sequencer^c; has_specified_output^op some information content entity^c and (is about^op some DNA replication^c); has participant^op some flow cytometer sorter^c

DNA residue methylation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000831

has super-classes: molecular quality^c

DNA sequence data^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001573

has super-classes: sequence data^c; is about^op some primary structure of DNA macromolecule^c

DNA sequencer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400103

has super-classes: measurement device^c; has function^op some measure function^c
has sub-classes: 454 Genome Sequence 20^c, 454 Genome Sequencer FLX^c, AB SOLiD System^c, ABI 377 automated sequencer^c, HeliScope Single Molecule Sequencer^c, Illumina Genome Analyzer II^c, Li-Cor 4300 DNA Analysis System^c, NextSeq 500^c

DNA sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000626

is equivalent to: (has_specified_input^op some deoxyribonucleic acid^c and (has role^op some evaluant role^c)) and (has_specified_output^op some DNA sequence data^c)
has super-classes: sequencing assay^c; has participant^op some DNA sequencer^c; achieves_planned_objective^op some assay objective^c
has sub-classes: DNA sequencing by ligation^c, DNA sequencing by synthesis^c, DNase I hypersensitive sites sequencing assay^c, bisulfite sequencing^c, formaldehyde-assisted isolation of regulatory elements assay^c, methylation-sensitive restriction enzyme sequencing assay^c, structural analysis by paired-end tag sequencing^c

DNA sequencing by ligation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000723

has super-classes: DNA sequencing^c; has_specified_input^op some DNA ligase^c
has sub-classes: SOLiD sequencing^c, massively parallel signature sequencing^c

DNA sequencing by synthesis^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000734

has super-classes: DNA sequencing^c; has_specified_input^op some DNA polymerase complex^c
has sub-classes: Helicos sequencing^c, Solexa sequencing^c, chain termination sequencing^c, pyrosequencing^c

DNase I hypersensitive sites sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001853

has super-classes: DNA sequencing^c; has_specified_input^op some deoxyribonucleic acid^c and (has role^op some evaluant role^c); has participant^op some DNA sequencer^c; has part^op some DNA sequencing^c; achieves_planned_objective^op some protein and DNA interaction identification objective^c; has part^op some library preparation^c; has_specified_output^op some DNA sequence data^c; has part^op some non specific enzymatic cleavage^c

document^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000310

has super-classes: information content entity^c
has sub-classes: publication^c

documenting^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000572

has super-classes: planned process^c; has_specified_output^op some document^c; has_specified_input^op some information content entity^c

dorsal plus ventral thalamus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001897

has super-classes: regional part of brain^c; lateral structure^c

dorsal root ganglion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000044

has super-classes: ganglion^c; neural crest-derived structure^c

dose response design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001418

has super-classes: compound treatment design^c; has part^op some study design independent variable^c and (is about^op some dose specification^c and (is about^op some administration of material to specimen^c)); has part^op some study design independent variable^c and (is about^op some study intervention^c and administration of material to specimen^c); has part^op some biological feature identification objective^c

dose specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000969

has super-classes: directive information entity^c

double-stranded DNA^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_4705

has super-classes: deoxyribonucleic acid^c
has sub-classes: PCR product^c, plasmid^c

drawing a conclusion based on data^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000338

has super-classes: planned process^c; has_specified_output^op some conclusion based on data^c; has_specified_input^op some data item^c

droplet sorter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400153

has super-classes: material separation device^c; has function^op some sort function^c

duct^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000058

has super-classes: tube^c
has sub-classes: digestive system duct^c, duct of male reproductive system^c

duct epithelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000068

is equivalent to: epithelial cell^c and (part of^op some duct^c)
has super-classes: epithelial cell^c; somatic cell^c; part of^op some duct^c
has sub-classes: branched duct epithelial cell^c

duct of male reproductive system^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005904

has super-classes: duct^c; reproductive structure^c
has sub-classes: epididymis^c, seminiferous tubule of testis^c

duodenum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002114

has super-classes: subdivision of digestive tract^c

dye swap design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500017

has super-classes: study design^c

dye swap merge^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200055

has super-classes: replicate analysis^c

dye swap quality control role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001142

has super-classes: reference substance role^c; inheres in^op some labeled nucleic acid extract^c

ecto-epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0010371

has super-classes: epithelium^c; ectoderm-derived structure^c
has sub-classes: nose epithelium^c, outer epithelium^c

ectoderm^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000924

has super-classes: germ layer^c

ectoderm-derived structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004121

has super-classes: anatomical structure^c
has sub-classes: brain^c, brain ventricle/choroid plexus^c, calcareous tooth^c, dermal skeletal element^c, ecto-epithelium^c, external nose^c, gland of diencephalon^c, gyrus^c, lacrimal gland^c, lobe of cerebral hemisphere^c, mammary gland^c, medulla oblongata^c, mixed ectoderm/mesoderm/endoderm-derived structure^c, mouth mucosa^c, neural crest^c, neural crest-derived structure^c, oral gland^c, regional part of brain^c, retina^c, skin gland^c, spinal cord^c, tongue^c, vomeronasal organ^c, zone of skin^c

ectodermal cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000221

has super-classes: embryonic cell^c; part of^op some ectoderm^c
has sub-classes: neurectodermal cell^c

ectonucleotide pyrophosphatase/phosphodiesterase family member 3^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001344

has super-classes: protein^c

Edman degradation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000705

has super-classes: sequencing assay^c; has_specified_output^op some information content entity^c and (is about^op some polypeptide^c); has_specified_input^op some molecular entity^c; has_specified_input^op some peptide^c or protein^c

electrically active cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000211

has super-classes: native cell^c
has sub-classes: electrically responsive cell^c

electrically responsive cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000393

has super-classes: electrically active cell^c
has sub-classes: muscle cell^c

elliptic^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000947

has super-classes: superelliptic^c
has sub-classes: circular^c

email address^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000429

has super-classes: information content entity^c
is in range of: has email address^op

embryo^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000922

has super-classes: multicellular organism^c

embryo stage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000068

has super-classes: life cycle stage^c

embryoid body^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0014374

has super-classes: embryonic structure^c

embryonic blood vessel endothelial progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002546

See CL:0002619.

has super-classes: mesodermal cell^c; somatic cell^c

embryonic cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002321

has super-classes: animal cell^c
has sub-classes: ectodermal cell^c, embryonic stem cell^c, endodermal cell^c, mesodermal cell^c, migratory neural crest cell^c

embryonic stem cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002322

This is an in vitro cell type and may be removed in future releases. These cells are reportedly SSEA-4-positive, CD73-negative, and CD324-positive.

has super-classes: stem cell^c; embryonic cell^c

embryonic stem cell line^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BTO_0001581

has super-classes: immortal stem cell line cell^c; derives from^op some embryonic stem cell^c
has sub-classes: CCE cell^c, Tet-On/Ngn3 embryonic stem cell^c

embryonic structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002050

has super-classes: anatomical structure^c; material anatomical entity^c
has sub-classes: definitive endoderm^c, embryoid body^c, embryonic tissue^c, pharyngeal arch artery^c

embryonic tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005291

has super-classes: tissue^c; embryonic structure^c
has sub-classes: germ layer / neural crest^c, pancreatic epithelial bud^c

endo-epithelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002076

has super-classes: epithelial cell^c; somatic cell^c; develops from^op some endodermal cell^c
has sub-classes: epithelial cell of thymus^c, respiratory epithelial cell^c

endo-epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005911

has super-classes: epithelium^c; endoderm-derived structure^c
has sub-classes: endoderm of foregut^c, exocrine pancreas epithelium^c, pancreatic epithelial bud^c, respiratory tract epithelium^c

endochondral bone^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002513

has super-classes: bone element^c; endochondral element^c
has sub-classes: limb bone^c

endochondral element^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0010363

has super-classes: skeletal element^c
has sub-classes: endochondral bone^c, limb endochondral element^c

endocrine cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000163

is equivalent to: secretory cell^c and (capable of^op some endocrine hormone secretion^c)
has super-classes: secretory cell^c; part of^op some endocrine gland^c; capable of^op some endocrine hormone secretion^c
has sub-classes: biogenic amine secreting cell^c, enteroendocrine cell^c, pancreatic endocrine cell^c

endocrine gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002368

has super-classes: gland^c
has sub-classes: adrenal/interrenal gland^c, digestive gland^c, parathyroid gland^c, pituitary gland^c, thymus^c, thyroid gland^c

endocrine hormone secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0060986

has super-classes: hormone secretion^c

endocrine pancreas^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000016

has super-classes: compound organ component^c; endoderm-derived structure^c

endocrine pancreas development^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0031018

has super-classes: single-organism developmental process^c; anatomical structure development^c

endoderm^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000925

has super-classes: germ layer^c

endoderm of foregut^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003258

has super-classes: epithelium^c; unilaminar epithelium^c; endo-epithelium^c

endoderm-derived structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004119

has super-classes: anatomical structure^c
has sub-classes: bile duct^c, bone of lower jaw^c, endo-epithelium^c, endocrine pancreas^c, exocrine pancreas^c, gall bladder^c, islet of Langerhans^c, liver^c, lung^c, mixed endoderm/mesoderm-derived structure^c, mucosa of tongue^c, pancreatic acinus^c, pancreatic duct^c, parotid gland^c, respiratory tract^c, respiratory tube^c, segment of respiratory tract^c, submandibular gland^c, thyroid gland^c, tongue^c, tonsil^c, tracheobronchial tree^c, upper respiratory conduit^c

endodermal cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000223

has super-classes: embryonic cell^c; part of^op some endoderm^c
has sub-classes: Pdx1-expressing foregut endodermal cell^c, Sox17-expressing definitive endodermal cell^c

endoglin^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001345

has super-classes: protein^c

endomitotic cell cycle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0007113

has super-classes: cell cycle^c

endopolyploid cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000417

has super-classes: polyploid cell^c
has sub-classes: hepatocyte^c

endothelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000115

From FMA: 9.07.2001: Endothelial cell has always been classified as a kind of epithelial cell, specifically a squamous cell but that is not true. First, endothelial cell can either be squamous or cuboidal (e.g. high-endothelial cell) and secondly, it has different embryological derivation (mesodermal) than a true epithelial cell (ectodermal and endodermal). The basis for present classification is the fact that it comprises the outermost layer or lining of anatomical structures (location-based) but a better structural basis for the differentia is the cytoskeleton of the cell. Endothelial cell has vimentin filaments while an epithelial cell has keratin filaments. [Onard].

has super-classes: lining cell^c; meso-epithelial cell^c
has sub-classes: endothelial cell of vascular tree^c

endothelial cell of artery^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_1000413

is equivalent to: endothelial cell^c and (part of^op some artery^c)
has super-classes: blood vessel endothelial cell^c; part of^op some artery^c; part of^op some endothelium of artery^c
has sub-classes: aortic endothelial cell^c

endothelial cell of vascular tree^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002139

These cells are reportedly CD31-positive, CD34-positive, CD144-positive, TAL1-positive.

has super-classes: endothelial cell^c
has sub-classes: blood vessel endothelial cell^c

endothelial transcription factor GATA-2^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000007858

has super-classes: protein^c

endothelial tube^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003915

has super-classes: endothelium^c; epithelial tube^c
has sub-classes: endothelium of artery^c

endothelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001986

has super-classes: simple squamous epithelium^c; meso-epithelium^c
has sub-classes: cardiovascular system endothelium^c, endothelial tube^c

endothelium of artery^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001917

has super-classes: endothelial tube^c; blood vessel endothelium^c; arterial system endothelium^c

enhancer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000165

has super-classes: gene_member_region^c

enteroendocrine cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000164

has super-classes: glandular epithelial cell^c; endocrine cell^c
has sub-classes: PP cell^c, type A enterocrine cell^c, type B pancreatic cell^c, type D enteroendocrine cell^c

entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000001

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: thing^c
has sub-classes: continuant^c, occurrent^c
is in domain of: has experimental factor value^op, value of experimental factor^op
is in range of: examines^op, has experimental factor^op, has experimental factor value^op, value of experimental factor^op

environment control function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000401

has super-classes: function^c

environmental control device^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001034

is equivalent to: has function^op some heat function^c or cool function^c or environment control function^c
has super-classes: device^c
has sub-classes: heating block^c, hybridization chamber^c, hybridization station^c, microarray platform^c, microarray wash station^c, oligonucleotide synthesizer^c, temperature control bath^c, thermal cycler^c

environmental history design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001226

has super-classes: study design^c; has part^op some biological feature identification objective^c

environmental material^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ENVO_00010483

has super-classes: material entity^c
has sub-classes: soil^c

enzymatic amplification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600058

has super-classes: material processing^c; achieves_planned_objective^op some material transformation objective^c; realizes^op some function^c and (inheres in^op some enzyme^c); has_specified_input^op some material entity^c and (has role^op some nucleic acid template role^c)
has sub-classes: linear amplification^c, polymerase chain reaction^c, reverse transcribed polymerase chain reaction^c

enzymatic cleavage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000231

has super-classes: material processing^c; realizes^op some function^c and (inheres in^op some enzyme^c); achieves_planned_objective^op some material transformation objective^c; has_specified_input^op some specimen^c
has sub-classes: non specific enzymatic cleavage^c, protease cleavage^c, specific enzymatic cleavage^c

enzymatic ligation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302892

has super-classes: material processing^c; realizes^op some function^c and (inheres in^op some enzyme^c); achieves_planned_objective^op some material transformation objective^c

enzyme^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000427

is equivalent to: material entity^c and (ribonucleic acid^c or protein complex^c or protein^c or (has part^op some ribonucleic acid^c) or (has part^op some protein complex^c) or (has part^op some protein^c)) and (has function^op some catalytic activity^c)
has super-classes: material entity^c
has sub-classes: reverse transcriptase^c

eosinophil^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000771

Eosinophils are also CD14-negative, CD32-positive, CD44-positive, CD48-positive, CD69-positive, CD192-negative, MBP1-positive, MBP2-positive, TLR2-negative, TLR4-negative, and lineage-negative (B220, CD2, CD14, CD19, CD56, CD71, CD117, CD123, CD235a (glycophorin A), and TER119). The cytokines IL-3, IL-5, and GM-CSF are involved in their development and differentiation. Usually considered CD16-negative, CD16 is observed on eosinophilic metamyelocyte.

is equivalent to: granulocyte^c and (has plasma membrane part^op some C-C chemokine receptor type 1^c) and (has plasma membrane part^op some C-C chemokine receptor type 3^c) and (has plasma membrane part^op some CD44 molecule^c) and (has plasma membrane part^op some CD69 molecule^c) and (has plasma membrane part^op some CD9 molecule^c)
has super-classes: granulocyte^c; has plasma membrane part^op some C-C chemokine receptor type 3^c; has plasma membrane part^op some C-C chemokine receptor type 1^c; has plasma membrane part^op some CD9 molecule^c; has plasma membrane part^op some CD44 molecule^c; has plasma membrane part^op some CD69 molecule^c

epididymis^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001301

has super-classes: duct of male reproductive system^c

epigenetic modification assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002020

is equivalent to: assay^c and (achieves_planned_objective^op some epigenetic modification identification objective^c)
has super-classes: assay^c
has sub-classes: ChIP-seq assay^c, DNA methylation profiling assay^c, DNA methylation profiling by ChIP-chip assay^c, histone modification identification by ChIP-chip assay^c

epigenetic modification identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001234

has super-classes: molecular feature identification objective^c

epigenetic modification process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000083

has super-classes: biological_process^c

epithelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000066

is equivalent to: animal cell^c and (part of^op some epithelium^c)
has super-classes: animal cell^c; part of^op some epithelium^c
has sub-classes: Pdx1-expressing foregut endodermal cell^c, Sox17-expressing Epcam+ pancreatic epithelial cell^c, duct epithelial cell^c, endo-epithelial cell^c, epithelial cell of gall bladder^c, epithelial cell of pancreas^c, glandular epithelial cell^c, hepatocyte^c, meso-epithelial cell^c, squamous epithelial cell^c

epithelial cell adhesion molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001559

has super-classes: protein^c

epithelial cell differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030855

has super-classes: cell differentiation^c

epithelial cell of exocrine pancreas^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_1001433

is equivalent to: epithelial cell^c and (part of^op some exocrine pancreas^c)
has super-classes: epithelial cell of pancreas^c; part of^op some exocrine pancreas^c
has sub-classes: pancreas exocrine glandular cell^c, pancreatic ductal cell^c

epithelial cell of gall bladder^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_1000415

is equivalent to: epithelial cell^c and (part of^op some gall bladder^c)
has super-classes: epithelial cell^c; somatic cell^c; part of^op some gall bladder^c

epithelial cell of lower respiratory tract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002632

is equivalent to: respiratory epithelial cell^c and (part of^op some lower respiratory tract^c)
has super-classes: respiratory epithelial cell^c; part of^op some lower respiratory tract^c
has sub-classes: epithelial cell of tracheobronchial tree^c

epithelial cell of pancreas^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000083

is equivalent to: epithelial cell^c and (part of^op some pancreas^c)
has super-classes: epithelial cell^c; somatic cell^c; pancreatic cell^c; develops from^op some endodermal cell^c; part of^op some pancreas^c
has sub-classes: epithelial cell of exocrine pancreas^c, pancreatic A cell^c, pancreatic D cell^c, pancreatic PP cell^c, type B pancreatic cell^c

epithelial cell of thymus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002293

is equivalent to: endo-epithelial cell^c and (part of^op some thymus^c)
has super-classes: endo-epithelial cell^c; part of^op some thymus^c
has sub-classes: medullary thymic epithelial cell^c

epithelial cell of tracheobronchial tree^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002202

is equivalent to: epithelial cell^c and (part of^op some tracheobronchial tree^c)
has super-classes: epithelial cell of lower respiratory tract^c; part of^op some tracheobronchial tree^c
has sub-classes: bronchial epithelial cell^c

epithelial sac^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0007499

has super-classes: epithelial tube^c; sac^c
has sub-classes: pancreatic epithelial bud^c

epithelial tube^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003914

has super-classes: tube^c; epithelium^c
has sub-classes: endothelial tube^c, epithelial sac^c

epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000483

has super-classes: tissue^c
has sub-classes: ciliated columnar epithelium^c, ecto-epithelium^c, endo-epithelium^c, endoderm of foregut^c, epithelial tube^c, glandular epithelium^c, meso-epithelium^c, nasal cavity epithelium^c, nose epithelium^c, olfactory epithelium^c, respiratory system epithelium^c, simple columnar epithelium^c, squamous epithelium^c, unilaminar epithelium^c

epithelium of bronchus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002031

has super-classes: simple columnar epithelium^c; lower respiratory tract epithelium^c

error correction data transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000668

is equivalent to: achieves_planned_objective^op some error correction objective^c
has super-classes: data transformation^c
has sub-classes: multiple testing correction method^c

error correction objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200186

has super-classes: correction objective^c
has sub-classes: multiple testing correction objective^c

erythroblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000765

is equivalent to: erythroid lineage cell^c and (has part^op some nucleus^c) and (capable of^op some erythrocyte differentiation^c) and (lacks_part^op some nucleolus^c) and (lacks_plasma_membrane_part^op some CD19 molecule^c) and (lacks_plasma_membrane_part^op some CD4 molecule^c) and (lacks_plasma_membrane_part^op some integrin alpha-M^c) and (lacks_plasma_membrane_part^op some CD3 epsilon^c) and (lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c) and (lacks_plasma_membrane_part^op some CD2 molecule^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c) and (lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c) and (lacks_plasma_membrane_part^op some CD14 molecule^c) and (lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c)
has super-classes: erythroid lineage cell^c; nucleate cell^c; precursor cell^c; lacks_plasma_membrane_part^op some CD19 molecule^c; lacks_plasma_membrane_part^op some CD2 molecule^c; develops from^op some proerythroblast^c; lacks_plasma_membrane_part^op some CD14 molecule^c; lacks_plasma_membrane_part^op some CD4 molecule^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c; lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c; lacks_plasma_membrane_part^op some integrin alpha-M^c; lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c; lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c; lacks_plasma_membrane_part^op some CD3 epsilon^c; has part^op some nucleus^c; lacks_part^op some nucleolus^c; capable of^op some erythrocyte differentiation^c
has sub-classes: basophilic erythroblast^c, orthochromatic erythroblast^c, polychromatophilic erythroblast^c

erythrocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000232

is equivalent to: erythroid lineage cell^c and (bearer of^op some biconcave^c) and (capable of^op some blood circulation^c) and (capable of^op some oxygen transport^c) and (lacks_part^op some ribosome^c) and (lacks_plasma_membrane_part^op some transferrin receptor protein 1^c)
has super-classes: blood cell^c; oxygen accumulating cell^c; erythroid lineage cell^c; lacks_plasma_membrane_part^op some transferrin receptor protein 1^c; develops from^op some reticulocyte^c; capable of^op some blood circulation^c; lacks_part^op some ribosome^c; bearer of^op some biconcave^c; capable of^op some oxygen transport^c

erythrocyte differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030218

has super-classes: myeloid cell differentiation^c

erythroid lineage cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000764

Note that in FMA erythropoietic cells are types of nucleated erythrocytes and thus don't include erythrocytes.

has super-classes: myeloid cell^c
has sub-classes: erythroblast^c, erythrocyte^c, erythroid progenitor cell^c, proerythroblast^c, reticulocyte^c

erythroid progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000038

has super-classes: erythroid lineage cell^c; myeloid lineage restricted progenitor cell^c; develops from^op some megakaryocyte-erythroid progenitor cell^c

erythroid transcription factor^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000007857

has super-classes: protein^c

establishing cell culture^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600036

A 'cell culture' as used here referes to a new lineage of cells in culture deriving from a single biological source.. New cultures are established through the initial isolation and culturing of cells from an organismal source, or through changes in an existing cell culture or line that result in a new culture with unique characteristics. This can occur through the passaging/selection of a primary culture into a secondary culture or line, or experimental modifications of an existing cell culture or line such as an immortalization process or other stable genetic modification. This class covers establishment of cultures of either multicellular organism cells or unicellular organisms.

has super-classes: material processing^c; has_specified_input^op some cell^c; has_specified_output^op some cultured cell population^c; achieves_planned_objective^op some material transformation objective^c; has_specified_input^op some culture medium^c
has sub-classes: establishing cell line^c

establishing cell line^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001867

has super-classes: establishing cell culture^c; has_specified_output^op some cell line^c

establishment of localization^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0051234

has super-classes: localization^c
has sub-classes: protein transport^c, secretion by cell^c, transport^c

ethnic group^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0001799

has super-classes: population^c

Euarchontoglires^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_314146

has super-classes: Amniota^c
has sub-classes: Homo sapiens^c, Murinae^c

euchromatin^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0000791

has super-classes: chromatin^c

Eukaryota^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_2759

has super-classes: organism^c
has sub-classes: Vertebrata <Metazoa>^c

eukaryotic cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000255

has super-classes: native cell^c
has sub-classes: animal cell^c

euploid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001393

has super-classes: ploidy^c
has sub-classes: diploid^c, haploid^c, polyploid^c

Euteleostomi^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_117571

has super-classes: Gnathostomata <vertebrate>^c
has sub-classes: Amniota^c, Teleostei^c

evaluant role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000067

has super-classes: role^c; realized in^op only assay^c; inheres in^op some material entity^c

ex vivo design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001211

has super-classes: study design^c

excision^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600022

has super-classes: material component separation^c; achieves_planned_objective^op some separation into different composition objective^c

excitation function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000374

has super-classes: function^c
has sub-classes: light emission function^c

exocrine cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000152

is equivalent to: secretory cell^c and (part of^op some exocrine gland^c)
has super-classes: secretory cell^c; part of^op some exocrine gland^c

exocrine gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002365

has super-classes: gland^c
has sub-classes: exocrine gland of integumental system^c, liver^c, oral gland^c, parotid gland^c, sebaceous gland^c

exocrine gland of integumental system^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0019319

has super-classes: exocrine gland^c; gland of integumental system^c
has sub-classes: lacrimal gland^c, mammary gland^c, sebaceous gland^c

exocrine pancreas^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000017

has super-classes: multi-tissue structure^c; endoderm-derived structure^c

exocrine pancreas epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0013697

has super-classes: endo-epithelium^c

experiment performer^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0000647

has super-classes: investigation agent role^c

experimentally modified cell in vitro^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000578

This class has been re-labeled to imply reference only to in vitro experimentally modified cells, similarly, the definition has been slightly updated to reflect this. 'experimentally modified cell' refers only to cells in vitro, and not modified in vivo/in environment cells. There is currently no class representing unmodified in vitro cells (other than the parent 'cell in vitro'), or a class representing modified native cells. More granular subclassing of experimentally modified cell can be found in ReO. MHB 1.12.12

has super-classes: cell in vitro^c
has sub-classes: cultured cell^c

exposure of material to environment^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600009

has super-classes: planned process^c
has sub-classes: acclimatization^c, waiting^c

external nose^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0007827

has super-classes: surface structure^c; ectoderm-derived structure^c

extracellular exosome assembly^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0071971

has super-classes: organelle organization^c; organelle assembly^c

extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000423

has super-classes: processed material^c; is_specified_output_of^op some extraction^c
has sub-classes: nucleic acid extract^c, protein extract^c

extraction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302884

has super-classes: material component separation^c; achieves_planned_objective^op some separation into different composition objective^c
has sub-classes: nucleic acid extraction^c

Extraction of Differential Gene Expression software^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBCS_0000164

has super-classes: differential expression software^c

extraembryonic membrane^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005631

has super-classes: extraembryonic structure^c; organ component layer^c
has sub-classes: yolk sac^c

extraembryonic structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000478

has super-classes: anatomical structure^c
has sub-classes: extraembryonic membrane^c, placenta^c, umbilical cord^c

eye^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000970

has super-classes: sense organ^c

F mating type^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001347

has super-classes: bacterial mating type^c

F minus mating type^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001348

has super-classes: bacterial mating type^c

facial bone^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003462

has super-classes: head bone^c; neural crest-derived structure^c
has sub-classes: bone of jaw^c

factorial design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500014

has super-classes: study design^c
has sub-classes: 2x2 factorial design^c, balanced incomplete block design^c, fractional factorial design^c

fallopian tube^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003889

has super-classes: tube^c; reproductive structure^c; lateral structure^c

family history^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0000493

has super-classes: clinical history^c

family history design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001329

has super-classes: study design^c; has part^op some organism feature identification objective^c

fasting^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002756

has super-classes: biological_process^c

fat cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000136

has super-classes: stuff accumulating cell^c; connective tissue cell^c; develops from^op some mesenchymal stem cell^c
has sub-classes: white fat cell^c

fat cell differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0045444

has super-classes: cell differentiation^c

feature extraction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001028

has super-classes: data transformation^c; has_specified_input^op some image^c; achieves_planned_objective^op some feature extraction objective^c; has_specified_output^op some data item^c

feature extraction objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200005

has super-classes: data transformation objective^c

Feature Extraction Software^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/swo/SWO_0000107

has super-classes: software^c

feed role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000248

has super-classes: complete nutrient role^c

female^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000383

has super-classes: phenotypic sex^c

female germ cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000021

is equivalent to: germ cell^c and (capable of^op some oogenesis^c)
has super-classes: germ cell^c; capable of^op some oogenesis^c
has sub-classes: oocyte^c

female gonad^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000992

has super-classes: gonad^c; reproductive organ^c

female meiotic division^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0007143

has super-classes: organelle organization^c

female pregnancy^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0007565

has super-classes: multi-organism reproductive process^c; multi-multicellular organism process^c

femtoliter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000104

has super-classes: volume unit^c

femtomole^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000043

has super-classes: substance unit^c

femur^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000981

has super-classes: bone element^c; hindlimb bone^c; hindlimb long bone^c; hindlimb endochondral element^c

Fetus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/FMA_63919

has super-classes: multicellular organism^c

fiat object^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000024

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: material entity^c

fibroblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000057

These cells may be vimentin-positive, fibronectin-positive, fsp1-positive, MMP-1-positive, collagen I-positive, collagen III-positive, and alpha-SMA-negative.

has super-classes: connective tissue cell^c; develops from^op some mesenchymal stem cell^c
has sub-classes: preadipocyte^c

figure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000308

has super-classes: information content entity^c
has sub-classes: image^c

filter function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000378

has super-classes: material separation function^c

flow cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400043

has super-classes: container^c; has function^op some contain function^c

flow cytometer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400044

has super-classes: cytometer^c; (has part^op some flow cell^c) and (has part^op some light source^c) and (has part^op some optical filter^c) and (has part^op some photodetector^c); has part^op some obscuration bar^c; has part^op some droplet sorter^c
has sub-classes: flow cytometer sorter^c

flow cytometer sorter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400099

has super-classes: material separation device^c; flow cytometer^c; has part^op some droplet sorter^c; has part^op some light source^c; has part^op some optical filter^c; has part^op some photodetector^c; has function^op some material separation function^c

formaldehyde-assisted isolation of regulatory elements assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001859

has super-classes: DNA sequencing^c; has part^op some cross linking^c; achieves_planned_objective^op some protein and DNA interaction identification objective^c; has_specified_output^op some DNA sequence data^c; has part^op some library preparation^c; has participant^op some DNA sequencer^c; has participant^op some sonicator^c; has part^op some DNA sequencing^c; has_specified_input^op some deoxyribonucleic acid^c and (has role^op some evaluant role^c)

Foxa2{LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004547

has super-classes: stem cell derived cell line^c

Foxm1{LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004060

has super-classes: stem cell derived cell line^c

Foxo1{tm1(DBD)Dac} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001701

has super-classes: mouse strain^c

Foxo1{tm1(GFP)Dac} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002061

has super-classes: mouse strain^c

fractional factorial design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500016

has super-classes: factorial design^c

freezing storage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000915

has super-classes: storage^c; achieves_planned_objective^op some material maintenance objective^c; (has_specified_input^op some material entity^c and (has quality^op some frozen^c)) and (has_specified_output^op some material entity^c and (has quality^op some frozen^c))

fresh specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000971

has super-classes: specimen with known storage state^c

frontal cortex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001870

has super-classes: cerebral hemisphere gray matter^c

frozen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001985

has super-classes: temperature^c

frozen specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000922

is equivalent to: (is_specified_output_of^op some freezing storage^c and (has_specified_input^op some has role^op some specimen role^c)) and (has role^op some specimen role^c)
has super-classes: specimen with known storage state^c

function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000034

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: disposition^c; realizable entity^c
has sub-classes: consume data function^c, contain function^c, cool function^c, environment control function^c, excitation function^c, heat function^c, information processor function^c, ionization function^c, material separation function^c, measure function^c, mechanical function^c, molecular_function^c, perturb function^c, solid support function^c, synthesizing function^c, transfer function^c
is in domain of: function of^op
is in range of: has function^op

functional beta cell like cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000014

is equivalent to: cell^c and (capable of^op some insulin secretion^c) and (capable of^op some detection of glucose^c)
has super-classes: cell^c; has part^op some transcription factor MafA^c; has part^op some pancreas/duodenum homeobox protein 1^c
has sub-classes: insulin-expressing mature beta cell^c

FVB/NJ-Tg(MIP-Luc-VU)3Pwrs/J mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000237

has super-classes: mouse strain^c

gall bladder^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002110

has super-classes: endoderm-derived structure^c; digestive system element^c; abdominal viscera^c; bladder organ^c

gamete generation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0007276

has super-classes: single organism reproductive process^c; multicellular organismal reproductive process^c
has sub-classes: oogenesis^c

ganglion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000045

has super-classes: cell cluster^c
has sub-classes: autonomic ganglion^c, ciliary ganglion^c, dorsal root ganglion^c, paravertebral ganglion^c

gastrocnemius^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001388

has super-classes: hindlimb zeugopod muscle^c

Gck{LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000255

has super-classes: stem cell derived cell line^c

Gck{tm1.1Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000193

has super-classes: mouse strain^c

Gck{tm2Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000192

has super-classes: mouse strain^c

Gck{tm3Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000191

has super-classes: mouse strain^c

gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000704

has super-classes: biological_region^c
has sub-classes: ncRNA_gene^c, protein_coding_gene^c, transgene^c
is in domain of: binding context^op, differential expression context^op, differential expression pattern^dp, has NCBI gene id^dp
is in range of: context of binding^op, context of differential expression^op, has gene member^op

gene expression^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0010467

has super-classes: macromolecule metabolic process^c
has sub-classes: cellular marker expression^c

gene knock in^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001149

has super-classes: genetic transformation^c

gene knock out^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001148

has super-classes: genetic transformation^c

gene list^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000118

has super-classes: data set^c

gene_member_region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000831

has super-classes: biological_region^c
has sub-classes: enhancer^c, transcript^c

gene_segment^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_3000000

has super-classes: biological_region^c
has sub-classes: pseudogenic_gene_segment^c

generically dependent continuant^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000031

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: continuant^c
has sub-classes: information content entity^c, sequence_feature^c
is in domain of: is concretized as^op
is in range of: concretizes^op
is disjoint with: independent continuant^c, specifically dependent continuant^c

genetic alteration information^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001364

has super-classes: genetic characteristics information^c
has sub-classes: allele information^c

genetic characteristics information^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001404

has super-classes: data item^c; is about^op some region^c and (is concretized as^op some inheres in^op some nucleic acid^c and (part of^op some organism^c))
has sub-classes: genetic alteration information^c, genetic population background information^c, genotype information^c

genetic modification design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001460

has super-classes: intervention design^c; has part^op some study design independent variable^c and (is about^op some study intervention^c and genetic transformation^c); has part^op some biological feature identification objective^c

genetic population background information^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001225

has super-classes: genetic characteristics information^c; part of^op some genotype information^c

genetic transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600043

has super-classes: material processing^c; achieves_planned_objective^op some genetic transformation objective^c; has_specified_output^op some genetically modified material^c
has sub-classes: chromosomal substitution^c, gene knock in^c, gene knock out^c, induced mutation^c, transfection^c

genetic transformation objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001153

has super-classes: material transformation objective^c

genetically modified material^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001151

is equivalent to: genetically modified organism^c or (cell^c and (is_specified_output_of^op some genetic transformation^c))
has super-classes: processed material^c
has sub-classes: genetically modified organism^c

genetically modified organism^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302859

is equivalent to: organism^c and (is_specified_output_of^op some genetic transformation^c)
has super-classes: genetically modified material^c; organism^c

genotype information^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001305

has super-classes: genetic characteristics information^c; (has part^op some genetic population background information^c) and (has part^op some genetic alteration information^c)
has sub-classes: wild type organism genotype information^c
is in range of: is about genotype^op

genotyping assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000435

is equivalent to: has_specified_output^op some genotype information^c
has super-classes: analyte assay^c; has_specified_output^op some genotype information^c; has_specified_input^op some specimen^c and (has part^op some deoxyribonucleic acid^c); achieves_planned_objective^op some sequence feature identification objective^c; realizes^op some analyte role^c and (role of^op some deoxyribonucleic acid^c)
has sub-classes: comparative genomic hybridization by array assay^c, genotyping by array assay^c, genotyping by high throughput sequencing assay^c

genotyping by array assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001274

has super-classes: genotyping assay^c; has participant^op some DNA microarray^c

genotyping by array design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001387

has super-classes: genotyping design^c; is concretized as^op some realized in^op some (has part^op some genotyping by array assay^c) and (has participant^op some DNA microarray^c)

genotyping by high throughput sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001247

has super-classes: genotyping assay^c; has participant^op some DNA sequencer^c

genotyping by high throughput sequencing design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001200

has super-classes: genotyping design^c; is concretized as^op some realized in^op some (has part^op some genotyping by high throughput sequencing assay^c) and (has participant^op some DNA sequencer^c)

genotyping design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001444

has super-classes: study design^c; is concretized as^op some realized in^op some has part^op some genotyping assay^c; has part^op some sequence feature identification objective^c
has sub-classes: genotyping by array design^c, genotyping by high throughput sequencing design^c

GEO ID^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000069

has super-classes: centrally registered identifier symbol^c; denotes^op only investigation^c

geographical location^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GAZ_00000448

has super-classes: site^c

germ cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000586

has super-classes: germ line cell^c; capable of^op some multicellular organismal reproductive process^c
has sub-classes: female germ cell^c

germ cell development^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0007281

has super-classes: developmental process involved in reproduction^c; single organism reproductive process^c; single-organism cellular process^c; cell development^c
has sub-classes: oogenesis^c

germ layer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000923

has super-classes: germ layer / neural crest^c
has sub-classes: ectoderm^c, endoderm^c, mesoderm^c

germ layer / neural crest^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0010316

has super-classes: embryonic tissue^c
has sub-classes: germ layer^c, neural crest^c

germ line cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000039

Originally this term had some plant germ line cell children.

has super-classes: animal cell^c; capable of^op some reproductive process^c
has sub-classes: germ cell^c

ghrelin secreting cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0005018

is equivalent to: secretory cell^c and (capable of^op some ghrelin secretion^c)
has super-classes: peptide hormone secreting cell^c; capable of^op some ghrelin secretion^c
has sub-classes: pancreatic epsilon cell^c

ghrelin secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0036321

has super-classes: peptide hormone secretion^c

Ghrl{Cre-eGFP} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000761

has super-classes: stem cell derived cell line^c

Ghrl{LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000721

has super-classes: stem cell derived cell line^c

Ghrl{tm1(Cre-eGFP)Suss} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004278

has super-classes: mouse strain^c

GKP2 cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000109

has super-classes: immortal animal cell line cell^c

GKP4 cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000110

has super-classes: immortal animal cell line cell^c

gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002530

has super-classes: organ^c
has sub-classes: endocrine gland^c, exocrine gland^c, gland of diencephalon^c, gland of gut^c, gland of integumental system^c, lacrimal gland^c, sex gland^c, thymus^c

gland of diencephalon^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003296

has super-classes: gland^c; ectoderm-derived structure^c
has sub-classes: pituitary gland^c

gland of gut^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003408

has super-classes: gland^c; digestive system element^c
has sub-classes: oral gland^c

gland of integumental system^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003297

has super-classes: gland^c
has sub-classes: exocrine gland of integumental system^c, skin gland^c

glandular acinus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0009842

has super-classes: cell cluster^c
has sub-classes: pancreatic acinus^c

glandular epithelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000150

has super-classes: epithelial cell^c; secretory cell^c; somatic cell^c; part of^op some glandular epithelium^c
has sub-classes: acinar cell^c, enteroendocrine cell^c, pancreas exocrine glandular cell^c

glandular epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0006799

has super-classes: epithelium^c

GLobal Identifier of Target Regions software^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBCS_0000166

has super-classes: software^c

globus pallidus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001875

has super-classes: telencephalic nucleus^c

glucagon^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000007891

has super-classes: protein^c

glucagon secreting cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000170

is equivalent to: secretory cell^c and (capable of^op some glucagon secretion^c)
has super-classes: peptide hormone secreting cell^c; capable of^op some glucagon secretion^c
has sub-classes: type A enterocrine cell^c

glucagon secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0070091

has super-classes: peptide hormone secretion^c

Glucagon:rtta mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000203

has super-classes: mouse strain^c

Gnathostomata <vertebrate>^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_7776

has super-classes: Vertebrata <Metazoa>^c
has sub-classes: Euteleostomi^c

gonad^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000991

has super-classes: reproductive organ^c
has sub-classes: female gonad^c, testis^c

graeco latin square design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500012

has super-classes: randomized complete block design^c

gram^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000021

has super-classes: mass unit^c

gram per deciliter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000208

has super-classes: mass density unit^c

gram per liter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000175

has super-classes: mass density unit^c

granulocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000094

is equivalent to: myeloid leukocyte^c and (has part^op some secretory granule^c) and (has plasma membrane part^op some integrin alpha-M^c) and (has plasma membrane part^op some carcinoembryonic antigen-related cell adhesion molecule 8^c) and (has plasma membrane part^op some urokinase plasminogen activator surface receptor^c) and (capable of^op some blood circulation^c) and (lacks_plasma_membrane_part^op some CD19 molecule^c) and (lacks_plasma_membrane_part^op some CD3 epsilon^c) and (lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c)
has super-classes: blood cell^c; myeloid leukocyte^c; lacks_plasma_membrane_part^op some CD19 molecule^c; has plasma membrane part^op some integrin alpha-M^c; has part^op some secretory granule^c; lacks_plasma_membrane_part^op some CD3 epsilon^c; has plasma membrane part^op some urokinase plasminogen activator surface receptor^c; lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c; capable of^op some blood circulation^c; has plasma membrane part^op some carcinoembryonic antigen-related cell adhesion molecule 8^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c
has sub-classes: basophil^c, eosinophil^c, neutrophil^c

granulocyte differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030851

has super-classes: myeloid leukocyte differentiation^c

granulocyte monocyte progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000557

Originally described in the dendritic cell ontology (DC_CL:0000042)(PMID:19243617). GMPs are reportedly CD16-positive, CD32-positive, CD34-positive, CD38-positive, CD45RA-positive, CD110-negative, CD117-positive, CD123-positive, and SCA1-negative.

is equivalent to: hematopoietic oligopotent progenitor cell^c and (part of^op some bone marrow^c) and (has part^op some transcription factor PU.1^c) and (has part^op some CCAAT/enhancer-binding protein alpha^c) and (has plasma membrane part^op some interleukin-3 receptor class 2 alpha chain^c) and (capable of^op some macrophage differentiation^c) and (capable of^op some granulocyte differentiation^c) and (lacks_part^op some erythroid transcription factor^c) and (lacks_part^op some endothelial transcription factor GATA-2^c)
has super-classes: myeloid cell^c; CD7-negative lymphoid progenitor OR granulocyte monocyte progenitor^c; precursor cell^c; bone marrow hematopoietic cell^c; has plasma membrane part^op some interleukin-3 receptor class 2 alpha chain^c; has part^op some transcription factor PU.1^c; lacks_part^op some endothelial transcription factor GATA-2^c; capable of^op some granulocyte differentiation^c; part of^op some bone marrow^c; develops from^op some common myeloid progenitor^c; lacks_part^op some erythroid transcription factor^c; has part^op some CCAAT/enhancer-binding protein alpha^c; capable of^op some macrophage differentiation^c

granulocytopoietic cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002191

is equivalent to: myeloid lineage restricted progenitor cell^c and (capable of^op some granulocyte differentiation^c)
has super-classes: myeloid lineage restricted progenitor cell^c; capable of^op some granulocyte differentiation^c
has sub-classes: myeloblast^c, myelocyte^c, promyelocyte^c

gray matter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002020

has super-classes: central nervous system cell part cluster^c
has sub-classes: basal ganglion^c, brain gray matter^c

gray matter of telencephalon^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0011300

has super-classes: brain gray matter^c
has sub-classes: cerebral hemisphere gray matter^c, striatum^c

gross anatomical part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CARO_0001008

has super-classes: material entity^c
has sub-classes: anatomical entity^c
is in range of: is about tissue^op

growth condition intervention design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000985

has super-classes: intervention design^c; has part^op some study design independent variable^c and (is about^op some growth environment^c); has part^op some study design independent variable^c and (is about^op some study intervention^c)

growth environment^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000997

has super-classes: material entity^c
has sub-classes: atmosphere^c

Gt(ROSA)26Sor{tm1(Ccnd1T286A)Stang} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001221

has super-classes: mouse strain^c

Gt(ROSA)26Sor{tm1(GCK*)Ydor} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000842

has super-classes: mouse strain^c

Gt(ROSA)26Sor{tm1(Myt1*)Hri} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000238

has super-classes: mouse strain^c

Gt(ROSA)26Sor{tm2.1(mix1b-mCherry)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004153

has super-classes: mouse strain^c

gyrus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000200

has super-classes: anatomical structure^c; ectoderm-derived structure^c; structure with developmental contribution from neural crest^c
has sub-classes: cingulate gyrus^c

h minus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001345

has super-classes: Schizosaccharomyces pombe mating type^c

h plus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001346

has super-classes: Schizosaccharomyces pombe mating type^c

H9 cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0003612

has super-classes: immortal cell line cell^c
has sub-classes: Sox17 expressiong H9 cell^c

haploid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001375

has super-classes: euploid^c

hardware optimization objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000232

has super-classes: hardware testing objective^c

hardware testing design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001957

is equivalent to: study design^c and (has part^op some hardware testing objective^c)
has super-classes: study design^c; has part^op some study design independent variable^c and (is about^op some device^c)

hardware testing objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000134

has super-classes: methodology testing objective^c
has sub-classes: hardware optimization objective^c

head^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000033

has super-classes: organism subdivision^c

head bone^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003457

has super-classes: bone element^c
has sub-classes: facial bone^c

heart^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000948

has super-classes: mesoderm-derived structure^c; thoracic segment organ^c; primary circulatory organ^c; structure with developmental contribution from neural crest^c

heart contraction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0060047

has super-classes: circulatory system process^c

heat function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000371

has super-classes: function^c

heating block^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400108

has super-classes: environmental control device^c; has function^op some heat function^c

Helicos sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000697

has super-classes: DNA sequencing by synthesis^c; immediately preceded by^op some immobilization^c; has participant^op some HeliScope Single Molecule Sequencer^c

HeliScope Single Molecule Sequencer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000717

has super-classes: DNA sequencer^c; is_manufactured_by^op value Helicos

hematopoietic cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000988

has super-classes: animal cell^c; somatic cell^c
has sub-classes: blood cell^c, bone marrow hematopoietic cell^c, hematopoietic precursor cell^c, leukocyte^c, myeloid cell^c

hematopoietic lineage restricted progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002031

is equivalent to: hematopoietic cell^c and (bearer of^op some unipotent^c)
has super-classes: hematopoietic precursor cell^c; develops from^op some hematopoietic oligopotent progenitor cell^c; bearer of^op some unipotent^c
has sub-classes: lymphoid lineage restricted progenitor cell^c, myeloid lineage restricted progenitor cell^c

hematopoietic multipotent progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000837

Markers differ between mouse and human.

is equivalent to: hematopoietic cell^c and (bearer of^op some multipotent^c) and (has plasma membrane part^op some CD34 molecule^c) and (lacks_plasma_membrane_part^op some CD19 molecule^c) and (lacks_plasma_membrane_part^op some CD4 molecule^c) and (lacks_plasma_membrane_part^op some integrin alpha-M^c) and (lacks_plasma_membrane_part^op some CD3 epsilon^c) and (lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c) and (lacks_plasma_membrane_part^op some CD2 molecule^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c) and (lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c) and (lacks_plasma_membrane_part^op some interleukin-7 receptor subunit alpha^c) and (lacks_plasma_membrane_part^op some CD14 molecule^c) and (lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c) and (lacks_plasma_membrane_part^op some lymphocyte antigen 76^c)
has super-classes: hematopoietic precursor cell^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c; lacks_plasma_membrane_part^op some lymphocyte antigen 76^c; lacks_plasma_membrane_part^op some CD3 epsilon^c; lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c; develops from^op some hematopoietic stem cell^c; has plasma membrane part^op some CD34 molecule^c; lacks_plasma_membrane_part^op some interleukin-7 receptor subunit alpha^c; lacks_plasma_membrane_part^op some integrin alpha-M^c; lacks_plasma_membrane_part^op some CD14 molecule^c; lacks_plasma_membrane_part^op some CD19 molecule^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c; lacks_plasma_membrane_part^op some CD2 molecule^c; bearer of^op some multipotent^c; lacks_plasma_membrane_part^op some CD4 molecule^c; lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c; lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c
has sub-classes: CD34-positive, CD38-negative multipotent progenitor cell^c

hematopoietic oligopotent progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002032

This cell type is intended to be compatible with any vertebrate hematopoietic oligopotent progenitor cell. For mammalian hematopoietic oligopotent progenitor cells known to be lineage-negative, please use the term 'hematopoietic oligopotent progenitor cell' (CL_0001060).

is equivalent to: hematopoietic cell^c and (bearer of^op some oligopotent^c)
has super-classes: hematopoietic precursor cell^c; develops from^op some hematopoietic multipotent progenitor cell^c; bearer of^op some oligopotent^c
has sub-classes: common lymphoid progenitor^c, common myeloid progenitor^c, hematopoietic oligopotent progenitor cell, lineage-negative^c, macrophage dendritic cell progenitor^c, megakaryocyte-erythroid progenitor cell^c

hematopoietic oligopotent progenitor cell, lineage-negative^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0001060

is equivalent to: hematopoietic oligopotent progenitor cell^c and (bearer of^op some oligopotent^c) and (lacks_plasma_membrane_part^op some CD19 molecule^c) and (lacks_plasma_membrane_part^op some CD4 molecule^c) and (lacks_plasma_membrane_part^op some integrin alpha-M^c) and (lacks_plasma_membrane_part^op some CD3 epsilon^c) and (lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c) and (lacks_plasma_membrane_part^op some CD2 molecule^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c) and (lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c) and (lacks_plasma_membrane_part^op some CD14 molecule^c) and (lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c) and (lacks_plasma_membrane_part^op some lymphocyte antigen 76^c)
has super-classes: hematopoietic oligopotent progenitor cell^c; lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c; lacks_plasma_membrane_part^op some CD2 molecule^c; lacks_plasma_membrane_part^op some integrin alpha-M^c; lacks_plasma_membrane_part^op some CD14 molecule^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c; lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c; lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c; bearer of^op some oligopotent^c; develops from^op some hematopoietic multipotent progenitor cell^c; lacks_plasma_membrane_part^op some CD4 molecule^c; lacks_plasma_membrane_part^op some lymphocyte antigen 76^c; lacks_plasma_membrane_part^op some CD3 epsilon^c; lacks_plasma_membrane_part^op some CD19 molecule^c
has sub-classes: CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor^c, CD7-negative lymphoid progenitor OR granulocyte monocyte progenitor^c

hematopoietic precursor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0008001

has super-classes: hematopoietic cell^c
has sub-classes: hematopoietic lineage restricted progenitor cell^c, hematopoietic multipotent progenitor cell^c, hematopoietic oligopotent progenitor cell^c, hematopoietic stem cell^c

hematopoietic progenitor cell differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002244

has super-classes: cell differentiation^c
has sub-classes: megakaryocyte differentiation^c

hematopoietic stem cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000037

Markers differ between species, and two sets of markers have been described for mice. HSCs are reportedly CD34-positive, CD45-positive, CD48-negative, CD150-positive, CD133-positive, and CD244-negative.

is equivalent to: hematopoietic cell^c and (capable of^op some hematopoietic progenitor cell differentiation^c) and (capable of^op some somatic stem cell division^c) and (lacks_plasma_membrane_part^op some CD19 molecule^c) and (lacks_plasma_membrane_part^op some CD4 molecule^c) and (lacks_plasma_membrane_part^op some integrin alpha-M^c) and (lacks_plasma_membrane_part^op some CD3 epsilon^c) and (lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c) and (lacks_plasma_membrane_part^op some CD2 molecule^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c) and (lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c) and (lacks_plasma_membrane_part^op some CD14 molecule^c) and (lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c) and (lacks_plasma_membrane_part^op some lymphocyte antigen 76^c)
has super-classes: somatic stem cell^c; hematopoietic precursor cell^c; capable of^op some hematopoietic progenitor cell differentiation^c; lacks_plasma_membrane_part^op some integrin alpha-M^c; lacks_plasma_membrane_part^op some CD19 molecule^c; lacks_plasma_membrane_part^op some CD3 epsilon^c; lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c; lacks_plasma_membrane_part^op some CD4 molecule^c; lacks_plasma_membrane_part^op some CD14 molecule^c; capable of^op some somatic stem cell division^c; lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c; lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c; develops from^op some angioblastic mesenchymal cell^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c; lacks_plasma_membrane_part^op some lymphocyte antigen 76^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c; lacks_plasma_membrane_part^op some CD2 molecule^c
has sub-classes: CD34-positive, CD38-negative hematopoietic stem cell^c

hemopoietic organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004177

has super-classes: organ^c; mesoderm-derived structure^c
has sub-classes: spleen^c, thymus^c

hemopoietic tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0012429

has super-classes: mesoderm-derived structure^c; lymphomyeloid tissue^c
has sub-classes: bone marrow^c

hepatoblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0005026

has super-classes: multi fate stem cell^c

hepatocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000182

Hepatocytes are reportedly MHC Class I-positive and MHC Class II-positive.

has super-classes: epithelial cell^c; metabolising cell^c; endopolyploid cell^c; somatic cell^c; part of^op some liver^c; develops from^op some hepatoblast^c

hepatocyte nuclear factor 1-alpha^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000008652

has super-classes: protein^c

hepatocyte nuclear factor 3-alpha^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000007602

has super-classes: protein^c

hepatocyte nuclear factor 3-beta^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000007603

has super-classes: protein^c

hepatocyte nuclear factor 4-alpha^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000008654

has super-classes: protein^c

hepatocyte nuclear factor 6^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000011639

has super-classes: protein^c

heritable_phenotypic_marker^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001500

has super-classes: biological_region^c

hermaphrodite^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001340

has super-classes: phenotypic sex^c

heteroarene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33833

has super-classes: organic heterocyclic compound^c; organic aromatic compound^c
has sub-classes: benzopyrrole^c, nucleobase-containing molecular entity^c

heteroatomic molecular entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_37577

has super-classes: polyatomic entity^c
has sub-classes: hydroxides^c, oxide^c, sulfur oxoacid derivative^c

heterobicyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33672

has super-classes: cyclic compound^c; heterocyclic compound^c
has sub-classes: organic heterobicyclic compound^c

heterochromatin^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0000792

has super-classes: chromatin^c

heterocycle metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0046483

has super-classes: cellular metabolic process^c
has sub-classes: nucleobase-containing compound metabolic process^c

heterocyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_5686

has super-classes: cyclic compound^c
has sub-classes: heterobicyclic compound^c, heteromonocyclic compound^c, heteropolycyclic compound^c, organic heterocyclic compound^c

heteromonocyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33670

has super-classes: cyclic compound^c; heterocyclic compound^c
has sub-classes: organic heteromonocyclic compound^c

heteroorganic entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33285

has super-classes: organic molecular entity^c
has sub-classes: organic heterocyclic compound^c, organochalcogen compound^c, organonitrogen compound^c

heteropolycyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33671

has super-classes: cyclic compound^c; heterocyclic compound^c
has sub-classes: organic heteropolycyclic compound^c

high affinity immunoglobulin epsilon receptor subunit alpha^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000007431

has super-classes: immunoglobulin gamma Fc receptor II/III/IV^c

high molecular weight DNA extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000834

has super-classes: DNA extract^c

high throughput sequence alignment^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000011

has super-classes: data transformation^c; has_specified_output^op some sequence data^c; has_specified_input^op some sequence data^c

hindbrain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002028

has super-classes: regional part of brain^c; structure with developmental contribution from neural crest^c

hindlimb bone^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003464

has super-classes: limb bone^c; bone of appendage girdle complex^c; hindlimb endochondral element^c
has sub-classes: femur^c, hindlimb long bone^c

hindlimb endochondral element^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0015022

has super-classes: limb endochondral element^c
has sub-classes: femur^c, hindlimb bone^c

hindlimb long bone^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003608

has super-classes: hindlimb bone^c; limb long bone^c
has sub-classes: femur^c

hindlimb zeugopod muscle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004256

has super-classes: skeletal muscle organ^c
has sub-classes: gastrocnemius^c, soleus muscle^c

histological sample preparation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000341

has super-classes: material processing^c; specimen collection process^c; achieves_planned_objective^op some material transformation objective^c; achieves_planned_objective^op some specimen collection objective^c; has_specified_input^op some organ section^c; has participant^op some microtome^c

histology^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600020

has super-classes: assay^c; has part^op some staining^c; has part^op some histological sample preparation^c; has part^op some imaging assay^c; has_specified_output^op some information content entity^c and (is about^op some cell^c or organ section^c); achieves_planned_objective^op some assay objective^c; has part^op some collecting specimen from organism^c

histone modification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0016570

has super-classes: cellular protein modification process^c; chromatin modification^c; single-organism metabolic process^c; single-organism organelle organization^c

histone modification identification by ChIP-chip assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002016

has super-classes: ChIP-chip assay^c; epigenetic modification assay^c; achieves_planned_objective^op some epigenetic modification identification objective^c; has_specified_output^op some information content entity^c and (is about^op some histone modification^c)

histone modification identification by ChIP-Seq assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002017

has super-classes: ChIP-seq assay^c; has_specified_output^op some information content entity^c and (is about^op some histone modification^c); achieves_planned_objective^op some epigenetic modification identification objective^c

history^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000182

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: process^c
is disjoint with: process profile^c

homeobox protein Nkx-2.2^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000011242

has super-classes: protein^c

homeobox protein Nkx-6.1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000011250

has super-classes: protein^c

Homo sapiens^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_9606

has super-classes: Euarchontoglires^c

homogenizer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400109

has super-classes: perturbation device^c; has function^op some perturb function^c

homotypic cell-cell adhesion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0034109

has super-classes: single organismal cell-cell adhesion^c
has sub-classes: leukocyte aggregation^c

hormone secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0046879

has super-classes: biological_process^c; hormone transport^c; signal release^c
has sub-classes: endocrine hormone secretion^c, peptide hormone secretion^c

hormone transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0009914

has super-classes: regulation of hormone levels^c; single-organism transport^c
has sub-classes: hormone secretion^c

host role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000725

has super-classes: role^c; inheres in^op some organism^c

hour^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000032

has super-classes: time unit^c

hybridization chamber^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400110

has super-classes: container^c; environmental control device^c; has function^op some contain function^c; has function^op some environment control function^c

hybridization station^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400111

is equivalent to: device^c and (has part^op some hybridization chamber^c) and (has function^op some environment control function^c)
has super-classes: environmental control device^c

hydrogensulfite^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_17137

has super-classes: sulfur oxoanion^c

hydroxides^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_24651

has super-classes: oxygen molecular entity^c; main group molecular entity^c; heteroatomic molecular entity^c
has sub-classes: carbon oxoacid^c

hyper graeco latin square design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500013

has super-classes: randomized complete block design^c

hypodermis^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002072

has super-classes: mesoderm-derived structure^c; organ component layer^c

hypothalamus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001898

has super-classes: regional part of brain^c

ICR^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/RS_0002307

has super-classes: rat strain^c

ileum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002116

has super-classes: subdivision of digestive tract^c

Illumina Genome Analyzer II^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000703

has super-classes: DNA sequencer^c; is_manufactured_by^op value Illumina

image^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000101

has super-classes: figure^c

image acquisition function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000397

has super-classes: measure function^c; inheres in^op some image creation device^c; realized in^op only image creation^c

image creation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001007

has super-classes: planned process^c; has_specified_output^op some image^c; has_specified_input^op some material entity^c
has sub-classes: array image creation^c

image creation device^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000398

is equivalent to: device^c and (has function^op some image acquisition function^c)
has super-classes: measurement device^c
has sub-classes: array scanner^c

imaging assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000185

has super-classes: assay^c; has_specified_output^op some image^c; achieves_planned_objective^op some assay objective^c

immaterial entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000141

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: independent continuant^c
has sub-classes: continuant fiat boundary^c, site^c, spatial region^c
is in range of: has 2D boundary^op
is disjoint with: material entity^c

immature^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001501

has super-classes: maturity^c

immobilization^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302902

has super-classes: material processing^c; achieves_planned_objective^op some material transformation objective^c

immortal animal cell line cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0000128

has super-classes: immortal cell line cell^c
has sub-classes: GKP2 cell^c, GKP4 cell^c, INS-1^c, MIN6^c, PANC-1 cell^c, R7T1 cell^c, immortal hematopoietic cell line cell^c, immortal neural cell line cell^c, mPAC L20 cell^c

immortal cell line^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0009828

has super-classes: cell line^c

immortal cell line cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0000019

has super-classes: cell line cell^c
has sub-classes: BETA-TC-3 cell^c, Daudi cell^c, H9 cell^c, K 562 cell^c, Raji cell^c, SW480 cell^c, immortal animal cell line cell^c, immortal mouse embryo-derived cell line cell^c, immortal neuron cell line cell^c, immortal somatic cell line cell^c, immortal stem cell line cell^c, lymphoblastoid cell line^c

immortal hematopoietic cell line cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0000147

has super-classes: immortal animal cell line cell^c; immortal somatic cell line cell^c
has sub-classes: Ainv15 cell^c

immortal mouse embryo-derived cell line cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0000503

has super-classes: immortal cell line cell^c
has sub-classes: 3T3-L1 cell^c, CGR8 cell^c

immortal neural cell line cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0000156

has super-classes: immortal animal cell line cell^c; immortal somatic cell line cell^c
has sub-classes: immortal neuron cell line cell^c

immortal neuron cell line cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0000081

has super-classes: immortal cell line cell^c; immortal neural cell line cell^c
has sub-classes: JURKAT cell^c

immortal somatic cell line cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0000166

has super-classes: immortal cell line cell^c
has sub-classes: immortal hematopoietic cell line cell^c, immortal neural cell line cell^c

immortal stem cell line cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0000044

has super-classes: immortal cell line cell^c; derives from^op some stem cell^c
has sub-classes: embryonic stem cell line^c

immune organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005057

has super-classes: organ^c
has sub-classes: lymph node^c, spleen^c, thymus^c

immune response^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006955

has super-classes: immune system process^c; response to stimulus^c
has sub-classes: adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains^c, innate immune response^c

immune system^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002405

has super-classes: anatomical structure^c

immune system process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002376

has super-classes: biological_process^c
has sub-classes: antigen processing and presentation^c, immune response^c, leukocyte activation^c, lymphocyte mediated immunity^c, somatic diversification of immune receptors^c

immunoglobulin complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0019814

has super-classes: protein complex^c
has sub-classes: B cell receptor complex^c, immunoglobulin complex, circulating^c

immunoglobulin complex, circulating^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0042571

has super-classes: immunoglobulin complex^c; adaptive immune receptor^c
has sub-classes: antibody reagent^c

immunoglobulin gamma Fc receptor II/III/IV^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001355

has super-classes: protein^c
has sub-classes: high affinity immunoglobulin epsilon receptor subunit alpha^c, low affinity immunoglobulin gamma Fc region receptor II^c, low affinity immunoglobulin gamma Fc region receptor III^c

immunoglobulin V(D)J recombination^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0033152

has super-classes: somatic diversification of immune receptors via germline recombination within a single locus^c; somatic recombination of immunoglobulin gene segments^c

immunoprecipitation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000690

has super-classes: material component separation^c; has_specified_input^op some immunoglobulin complex, circulating^c; achieves_planned_objective^op some material separation objective^c

immunoprecipitation assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001700

is equivalent to: assay^c and (has part^op some immunoprecipitation^c) and (achieves_planned_objective^op some analyte measurement objective^c)
has super-classes: analyte assay^c
has sub-classes: RNP (ribonuclear particle) immunoprecipitation high- throughput sequencing assay^c, assay using chromatin immunoprecipitation^c, cross-linking immunoprecipitation high-throughput sequencing assay^c

imprinting design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001408

has super-classes: study design^c; has part^op some molecular feature identification objective^c

in vitro design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001285

has super-classes: study design^c

in vivo design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001199

has super-classes: study design^c

increased nucleus size^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CP_0000037

is equivalent to: nucleus^c and (bearer of^op some increased size^c)
has super-classes: nucleus^c; bearer of^op some increased size^c

increased object quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002305

is equivalent to: physical object quality^c and (increased_in_magnitude_relative_to^op some normal^c)
has super-classes: physical object quality^c; increased quality^c; increased_in_magnitude_relative_to^op some normal^c
has sub-classes: increased size^c

increased quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002300

is equivalent to: quality^c and (increased_in_magnitude_relative_to^op some normal^c)
has super-classes: deviation(from_normal)^c; increased_in_magnitude_relative_to^op some normal^c
has sub-classes: increased object quality^c

increased size^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000586

is equivalent to: size^c and (increased_in_magnitude_relative_to^op some normal^c)
has super-classes: size^c; increased object quality^c; increased_in_magnitude_relative_to^op some normal^c

independent continuant^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000004

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: continuant^c
has sub-classes: immaterial entity^c, material entity^c
is in domain of: capable of^op, develops from^op, has role^op
is in range of: develops from^op, occurs in^op
is disjoint with: specifically dependent continuant^c, generically dependent continuant^c

individual genetic characteristics comparison design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001448

has super-classes: study design^c; has part^op some study design independent variable^c and (is about^op some genetic characteristics information^c); has part^op some biological feature identification objective^c

individual organism identifier^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001141

has super-classes: centrally registered identifier symbol^c; denotes^op only organism^c

individual-nucleotide resolution cross-linking and immunoprecipitation sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002043

has super-classes: cross-linking immunoprecipitation high-throughput sequencing assay^c

indoles^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_24828

has super-classes: benzopyrrole^c
has sub-classes: Cy3 dye^c, Cy5 dye^c

induced mutation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001154

has super-classes: genetic transformation^c

infection^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_1110021

has super-classes: pathologic process^c; realizes^op some disposition to infect an organism^c

information content entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000030

has super-classes: generically dependent continuant^c; is about^op some entity^c
has sub-classes: centrally registered identifier^c, clinical history^c, conclusion based on data^c, data item^c, database^c, datum label^c, directive information entity^c, document^c, email address^c, figure^c, record of missing knowledge^c, sequence feature annotation^c, symbol^c, textual entity^c, value specification^c
is in domain of: context of binding^op, context of differential expression^op, has value specification^op, is about^op
is in range of: binding context^op, differential expression context^op

information processor function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000392

has super-classes: function^c; has part^op some consume data function^c; has part^op some measure function^c

injection^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000426

is equivalent to: (realizes^op some material to be added role^c) and (realizes^op some function^c and (inheres in^op some syringe^c))
has super-classes: adding a material entity into a target^c; achieves_planned_objective^op some adding material objective^c
has sub-classes: intramuscular injection^c, intraperitoneal injection^c, intravenous injection^c, subcutaneous injection^c

injury design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001374

has super-classes: study design^c; has part^op some organism feature identification objective^c

innate behavior design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001202

has super-classes: study design^c; has part^op some organism feature identification objective^c

innate immune response^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0045087

has super-classes: response to stress^c; immune response^c
has sub-classes: natural killer cell mediated immunity^c

INS-1^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002529

has super-classes: immortal animal cell line cell^c
has sub-classes: INS-1 (832/1 and 832/2)^c, INS-1 (832/1) cell^c, INS-1 (832/13 and 833/15)^c, INS-1 (832/13) cell^c, INS-1 (832/2) cell^c, INS-1 (833/117) cell^c, INS-1 (833/15) cell^c, INS-1 (834/40) cell^c, INS-1E^c

INS-1 (832/1 and 832/2)^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000112

has super-classes: INS-1^c

INS-1 (832/1) cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000113

has super-classes: INS-1^c

INS-1 (832/13 and 833/15)^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000114

has super-classes: INS-1^c

INS-1 (832/13) cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000115

has super-classes: INS-1^c

INS-1 (832/2) cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000116

has super-classes: INS-1^c

INS-1 (833/117) cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000117

has super-classes: INS-1^c

INS-1 (833/15) cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000118

has super-classes: INS-1^c

INS-1 (834/40) cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000119

has super-classes: INS-1^c

INS-1E^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000120

has super-classes: INS-1^c

Ins2{Apple.LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004156

has super-classes: stem cell derived cell line^c

Insm1-expressing endocrine progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000053

has super-classes: non-terminally differentiated cell^c; pancreatic cell^c; participates in^op some endocrine pancreas development^c; has part^op some insulinoma-associated protein 1^c; part of^op some pancreas^c
has sub-classes: Insm1-expressing Pdx1 high-positive pancreatic endocrine progenitor cell^c, Insm1-expressing Pdx1 low-positive pancreatic endocrine progenitor cell^c

Insm1-expressing Pdx1 high-positive pancreatic endocrine progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000057

has super-classes: Insm1-expressing endocrine progenitor cell^c; produces_high_amount^op some pancreas/duodenum homeobox protein 1^c; has part^op some pancreas/duodenum homeobox protein 1^c

Insm1-expressing Pdx1 low-positive pancreatic endocrine progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000058

has super-classes: Insm1-expressing endocrine progenitor cell^c; has part^op some pancreas/duodenum homeobox protein 1^c; produces_low_amount^op some pancreas/duodenum homeobox protein 1^c

Insm1-lacking endocrine progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000054

has super-classes: non-terminally differentiated cell^c; part of^op some endocrine pancreas^c; lacks_part^op some insulinoma-associated protein 1^c

Insm1tm2(GFP.Cre)Mgn/Pdx1tm2(CFP)Mgn mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000059

has super-classes: mouse strain^c

Insm1tm2Mgn mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000020

has super-classes: mouse strain^c

Insm1{LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000256

has super-classes: stem cell derived cell line^c

Insm1{Pdx1.YFP} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004072

has super-classes: stem cell derived cell line^c

Insm1{tm1.1Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000661

has super-classes: mouse strain^c

insulin^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000009054

has super-classes: protein^c

insulin expressing cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000004

is equivalent to: cell^c and (has part^op some insulin^c)
has super-classes: cell^c
has sub-classes: insulin secreting cell^c

insulin gene enhancer protein ISL-1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000009116

has super-classes: protein^c

insulin secreting cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000168

is equivalent to: secretory cell^c and (capable of^op some insulin secretion^c)
has super-classes: insulin expressing cell^c; protein secreting cell^c; peptide hormone secreting cell^c; has part^op some insulin^c; capable of^op some insulin secretion^c
has sub-classes: type B pancreatic cell^c

insulin secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030073

has super-classes: protein secretion^c; peptide hormone secretion^c

insulin-expressing immature beta cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000055

has super-classes: type B pancreatic cell^c; bearer of^op some immature^c; part of^op some endocrine pancreas^c; has part^op some insulin^c

insulin-expressing mature beta cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000056

has super-classes: functional beta cell like cell^c; type B pancreatic cell^c; capable of^op some detection of glucose^c; bearer of^op some mature^c; has part^op some insulin^c; part of^op some islet of Langerhans^c

insulinoma^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0000549

has super-classes: neoplasm^c

insulinoma cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BTO_0000632

has super-classes: cancer cell^c

insulinoma-associated protein 1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000009062

has super-classes: protein^c

integrin alpha-M^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001012

has super-classes: protein^c

integumentary adnexa^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0006003

has super-classes: organ part^c
has sub-classes: skin gland^c

interleukin-2 receptor subunit beta^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001381

has super-classes: protein^c

interleukin-3 receptor class 2 alpha chain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001865

has super-classes: protein^c

interleukin-5 receptor subunit alpha^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001867

has super-classes: protein^c

interleukin-7 receptor subunit alpha^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001869

has super-classes: protein^c

International Unit^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002927

has super-classes: measurement unit label^c

intervention design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000115

is equivalent to: study design^c and (has part^op some study design independent variable^c and (is about^op some study intervention^c))
has super-classes: study design^c
has sub-classes: compound treatment design^c, genetic modification design^c, growth condition intervention design^c, post-transcriptional modification design^c, randomized complete block design^c, repeated measure design^c, sequential design^c, stimulus or stress design^c

intestine^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000160

has super-classes: subdivision of digestive tract^c

intracellular membrane-bounded organelle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043231

has super-classes: membrane-bounded organelle^c; intracellular organelle^c
has sub-classes: cytoplasmic membrane-bounded vesicle^c, nucleus^c, vacuole^c

intracellular non-membrane-bounded organelle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043232

has super-classes: organelle^c; intracellular organelle^c
has sub-classes: nucleolus^c, ribosome^c

intracellular organelle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043229

has super-classes: organelle^c; intracellular part^c
has sub-classes: cytoplasmic vesicle^c, intracellular membrane-bounded organelle^c, intracellular non-membrane-bounded organelle^c

intracellular organelle part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044446

has super-classes: organelle part^c; intracellular part^c
has sub-classes: chromatin^c, cytoplasmic vesicle part^c, nucleolus^c

intracellular part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044424

has super-classes: cell part^c
has sub-classes: DNA polymerase complex^c, cytoplasm^c, cytoplasmic part^c, intracellular organelle^c, intracellular organelle part^c, ribonucleoprotein complex^c

intramuscular injection^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000934

is equivalent to: (realizes^op some material to be added role^c) and (realizes^op some function^c and (inheres in^op some syringe^c)) and (realizes^op some target of material addition role^c and (role of^op some skeletal muscle tissue^c))
has super-classes: injection^c; administering substance in vivo^c; achieves_planned_objective^op some adding material objective^c

intraperitoneal administration^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000429

is equivalent to: (realizes^op some material to be added role^c) and (realizes^op some target of material addition role^c and (role of^op some peritoneum^c))
has super-classes: administering substance in vivo^c; achieves_planned_objective^op some adding material objective^c
has sub-classes: intraperitoneal injection^c

intraperitoneal injection^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000281

is equivalent to: (realizes^op some material to be added role^c) and (realizes^op some function^c and (inheres in^op some syringe^c)) and (realizes^op some target of material addition role^c and (role of^op some peritoneum^c))
has super-classes: injection^c; intraperitoneal administration^c; achieves_planned_objective^op some adding material objective^c

intravenous injection^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000994

is equivalent to: (realizes^op some material to be added role^c) and (realizes^op some function^c and (inheres in^op some syringe^c)) and (realizes^op some target of material addition role^c and (role of^op some vein^c))
has super-classes: injection^c; administering substance in vivo^c; achieves_planned_objective^op some adding material objective^c

investigation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000066

has super-classes: planned process^c; has part^op some study design execution^c; has part^op some drawing a conclusion based on data^c; has part^op some documenting^c; has part^op some planning^c and (has_specified_output^op some study design^c)
is in domain of: examines^op, has experimental factor^op

investigation agent role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000202

Philly2013: Historically, this role would have been borne only by humans or organizations. However, we now also want to enable investigations run by robot scientists such as ADAM (King et al, Science, 2009)

is equivalent to: role^c and (inheres in^op some bearer of^op some concretizes^op some objective_achieved_by^op some part of^op some investigation^c)
has super-classes: role^c; realized in^op only investigation^c
has sub-classes: data analyst^c, experiment performer^c, investigator^c, reporting party role^c, submitter^c, worker role^c

investigator^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0001739

has super-classes: investigation agent role^c

ion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_24870

has super-classes: molecular entity^c
has sub-classes: polyatomic anion^c, polyatomic ion^c

ion detector^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000364

has super-classes: measurement device^c; has function^op some measure function^c

ion source^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000361

has super-classes: device^c; has function^op some ionization function^c

ion transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006811

has super-classes: single-organism transport^c
has sub-classes: ammonium transport^c, cation transport^c

ionization function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000385

has super-classes: function^c

irradiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302889

has super-classes: material processing^c; has participant^op some light source^c; has_specified_input^op some material entity^c; achieves_planned_objective^op some material transformation objective^c

islet expansion in vitro^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000084

has super-classes: planned process^c

islet of Langerhans^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000006

has super-classes: endoderm-derived structure^c; cell cluster^c
has sub-classes: islets in diabetes^c

islet of Langerhans morphology trait^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/VT_0005215

has super-classes: morphology^c

islets in diabetes^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000085

has super-classes: islet of Langerhans^c

JURKAT cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0007043

has super-classes: immortal neuron cell line cell^c

K 562 cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0007050

has super-classes: immortal cell line cell^c

kelvin^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000012

has super-classes: temperature unit^c; base unit^c

kidney^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002113

has super-classes: cavitated compound organ^c; abdomen element^c; lateral structure^c

killing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600006

has super-classes: material processing^c; achieves_planned_objective^op some material transformation objective^c; has_specified_input^op some organism^c and (has quality^op some alive^c); has_specified_output^op some organism^c and (has quality^op some dead^c)
has sub-classes: animal euthanization^c, cell lysis^c

kilogram^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000009

has super-classes: mass unit^c; base unit^c

KLRB1-like protein^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001874

has super-classes: protein^c

knee joint^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001485

has super-classes: limb joint^c; synovial limb joint^c

labeled DNA extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000908

has super-classes: labeled nucleic acid extract^c; has grain^op some deoxyribonucleic acid^c; (is_specified_output_of^op some addition of molecular label^c and (has_specified_input^op some DNA extract^c)) and (has role^op some specimen role^c)

labeled nucleic acid extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001143

has super-classes: labeled specimen^c; has grain^op some nucleic acid^c; (is_specified_output_of^op some addition of molecular label^c and (has_specified_input^op some nucleic acid extract^c)) and (has role^op some specimen role^c)
has sub-classes: labeled DNA extract^c, labeled RNA extract^c

labeled RNA extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000921

has super-classes: labeled nucleic acid extract^c; (is_specified_output_of^op some addition of molecular label^c and (has_specified_input^op some RNA extract^c)) and (has role^op some specimen role^c); has grain^op some ribonucleic acid^c

labeled specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000924

is equivalent to: specimen^c and (has part^op some molecular label^c) and (is_specified_output_of^op some addition of molecular label^c)
has super-classes: processed specimen^c; molecular-labeled material^c
has sub-classes: labeled nucleic acid extract^c

lacrimal gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001817

has super-classes: gland^c; ectoderm-derived structure^c; structure with developmental contribution from neural crest^c; exocrine gland of integumental system^c

large intestine^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000059

has super-classes: subdivision of digestive tract^c; digestive system element^c

large pancreatic ductal cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000106

has super-classes: pancreatic ductal cell^c

lateral structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0015212

has super-classes: anatomical structure^c
has sub-classes: adrenal gland^c, dorsal plus ventral thalamus^c, fallopian tube^c, kidney^c, lung^c, major salivary gland^c, olfactory bulb^c

latin square design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500011

has super-classes: randomized complete block design^c

length unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000001

has super-classes: measurement unit label^c
has sub-classes: centimeter^c, meter^c, micrometer^c, millimeter^c, nanometer^c

leukemia^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0000565

has super-classes: lymphoid neoplasm^c
has sub-classes: acute myeloid leukemia^c, chronic myelogenous leukemia^c

leukocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000738

is equivalent to: hematopoietic cell^c and (capable of^op some ameboidal-type cell migration^c)
has super-classes: motile cell^c; hematopoietic cell^c; part of^op some immune system^c; capable of^op some ameboidal-type cell migration^c; develops from^op some hematopoietic stem cell^c
has sub-classes: dendritic cell^c, myeloid leukocyte^c, nongranular leukocyte^c

leukocyte activation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0045321

has super-classes: immune system process^c; single-organism cellular process^c
has sub-classes: lymphocyte activation^c, myeloid dendritic cell differentiation^c

leukocyte aggregation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0070486

has super-classes: leukocyte cell-cell adhesion^c; homotypic cell-cell adhesion^c
has sub-classes: T cell activation^c

leukocyte cell-cell adhesion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0007159

has super-classes: single organismal cell-cell adhesion^c
has sub-classes: leukocyte aggregation^c

leukocyte differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002521

has super-classes: cell differentiation^c
has sub-classes: lymphocyte differentiation^c, myeloid dendritic cell differentiation^c, myeloid leukocyte differentiation^c

leukosialin^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001879

has super-classes: protein^c

Li-Cor 4300 DNA Analysis System^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000710

has super-classes: DNA sequencer^c; is_manufactured_by^op value Li-Cor

library preparation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000711

has super-classes: material processing^c; achieves_planned_objective^op some material transformation objective^c; has_specified_output^op some cDNA library^c or paired-end library^c or single fragment library^c or phage display library^c; has_specified_input^op some deoxyribonucleic acid^c or double-stranded DNA^c
has sub-classes: paired-end library preparation^c

life cycle stage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000105

has super-classes: biological_process^c
has sub-classes: embryo stage^c, mouse postnatal^c, mouse prenatal^c, post-embryonic stage^c, post-juvenile adult stage^c, sexually immature stage^c

light emission device^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001032

is equivalent to: has function^op some light emission function^c
has super-classes: device^c
has sub-classes: light source^c

light emission function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000367

has super-classes: excitation function^c

light source^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400065

has super-classes: light emission device^c; has function^op some light emission function^c

light unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000157

has super-classes: measurement unit label^c

limb bone^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002428

has super-classes: endochondral bone^c; bone of free limb or fin^c; limb endochondral element^c
has sub-classes: hindlimb bone^c, limb long bone^c

limb endochondral element^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0015061

has super-classes: mesoderm-derived structure^c; endochondral element^c
has sub-classes: hindlimb endochondral element^c, limb bone^c

limb joint^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003657

has super-classes: skeletal joint^c
has sub-classes: knee joint^c, synovial limb joint^c

limb long bone^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003606

has super-classes: bone element^c; limb bone^c
has sub-classes: hindlimb long bone^c

lincRNA_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001641

has super-classes: ncRNA_gene^c

linear amplification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001494

has super-classes: enzymatic amplification^c

lining cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000213

has super-classes: barrier cell^c
has sub-classes: endothelial cell^c

linlog transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200021

has super-classes: normalization data transformation^c; achieves_planned_objective^op some data normalization objective^c

liquid handler^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400112

has super-classes: device^c; has function^op some transfer function^c

liter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000099

has super-classes: volume unit^c

liver^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002107

has super-classes: exocrine gland^c; endoderm-derived structure^c; abdomen element^c; digestive gland^c

lobe of cerebral hemisphere^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0016526

has super-classes: organ part^c; ectoderm-derived structure^c; structure with developmental contribution from neural crest^c
has sub-classes: parietal lobe^c

localization^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0051179

has super-classes: biological_process^c
has sub-classes: establishment of localization^c, protein transport^c, single-organism localization^c

loess global transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200023

has super-classes: loess transformation^c

loess group transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200024

has super-classes: loess transformation^c

loess scale group transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200025

has super-classes: scaling data transformation^c; immediately preceded by^op some loess group transformation^c; achieves_planned_objective^op some scaling objective^c

loess transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200071

has super-classes: normalization data transformation^c; achieves_planned_objective^op some data normalization objective^c
has sub-classes: loess global transformation^c, loess group transformation^c

long non-coding RNA^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000086

has super-classes: ncRNA^c

loop design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500009

has super-classes: study design^c

low affinity immunoglobulin gamma Fc region receptor II^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001479

has super-classes: immunoglobulin gamma Fc receptor II/III/IV^c

low affinity immunoglobulin gamma Fc region receptor III^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001483

has super-classes: immunoglobulin gamma Fc receptor II/III/IV^c

lower respiratory tract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001558

has super-classes: segment of respiratory tract^c

lower respiratory tract epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004815

has super-classes: respiratory tract epithelium^c
has sub-classes: epithelium of bronchus^c, lung epithelium^c

lowess global transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001481

has super-classes: lowess transformation^c

lowess group transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001474

has super-classes: lowess transformation^c

lowess transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001477

has super-classes: normalization data transformation^c; achieves_planned_objective^op some data normalization objective^c
has sub-classes: lowess global transformation^c, lowess group transformation^c

lung^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002048

has super-classes: organ^c; endoderm-derived structure^c; thoracic segment organ^c; lateral structure^c

lung epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000115

has super-classes: lower respiratory tract epithelium^c

lymph node^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000029

has super-classes: immune organ^c

lymphoblastoid cell line^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BTO_0000773

has super-classes: immortal cell line cell^c

lymphocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000542

Editors note: consider adding taxon constraint to vertebrata (PMID:18025161)

is equivalent to: leukocyte^c and (has part^op some neutrophillic cytoplasm^c) and (has part^op some increased nucleus size^c) and (has part^op some heterochromatin^c) and (lacks_part^op some secretory granule^c)
has super-classes: nongranular leukocyte^c; nucleate cell^c; has part^op some increased nucleus size^c; lacks_part^op some secretory granule^c; has part^op some neutrophillic cytoplasm^c; has part^op some heterochromatin^c; develops from^op some common lymphoid progenitor^c
has sub-classes: T cell^c, lymphocyte of B lineage^c, natural killer cell^c

lymphocyte activation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0046649

has super-classes: leukocyte activation^c
has sub-classes: T cell activation^c, lymphocyte differentiation^c

lymphocyte antigen 6G^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000002978

has super-classes: protein^c

lymphocyte antigen 76^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000002981

has super-classes: protein^c

lymphocyte differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030098

has super-classes: leukocyte differentiation^c; lymphocyte activation^c
has sub-classes: T cell differentiation^c

lymphocyte mediated immunity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002449

has super-classes: immune system process^c
has sub-classes: B cell mediated immunity^c, T cell mediated immunity^c, natural killer cell mediated immunity^c

lymphocyte of B lineage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000945

Types of B lineage lymphocytes include B cells and antibody secreting cells (plasmablasts and plasma cells). Lymphocytes of B cell lineage can be distinguished from those of T cell lineage by their lack of CD3e (as part of the T cell receptor complex).

is equivalent to: lymphocyte^c and (has plasma membrane part^op some CD19 molecule^c) and (lacks_plasma_membrane_part^op some CD3 epsilon^c)
has super-classes: lymphocyte^c; develops from^op some pro-B cell^c; lacks_plasma_membrane_part^op some CD3 epsilon^c; has plasma membrane part^op some CD19 molecule^c
has sub-classes: B cell^c

lymphoid lineage restricted progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000838

Note that this is a class of cell types, not an identified single cell type.

is equivalent to: hematopoietic lineage restricted progenitor cell^c and (capable of^op some lymphocyte differentiation^c)
has super-classes: hematopoietic lineage restricted progenitor cell^c; precursor cell^c; capable of^op some lymphocyte differentiation^c
has sub-classes: pro-B cell^c, pro-NK cell^c, pro-T cell^c

lymphoid neoplasm^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0001642

has super-classes: cancer^c
has sub-classes: Burkitts lymphoma^c, acute lymphoblastic leukemia^c, leukemia^c, myeloid neoplasm^c

lymphomyeloid tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0034769

has super-classes: tissue^c
has sub-classes: hemopoietic tissue^c, tonsil^c

lyophilization storage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000927

can link to freezing-dying equipment, such as freeze-dryer, rotary evaporator, if needed

has super-classes: storage^c; achieves_planned_objective^op some material maintenance objective^c; has_specified_input^op some material entity^c

lyophilized specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000965

is equivalent to: (is_specified_output_of^op some lyophilization storage^c and (has_specified_input^op some has role^op some specimen role^c)) and (has role^op some specimen role^c)
has super-classes: specimen with known storage state^c

macromolecular complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0032991

has super-classes: cellular_component^c
has sub-classes: chromatin^c, protein complex^c, ribonucleoprotein complex^c

macromolecule biosynthetic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0009059

has super-classes: macromolecule metabolic process^c; organic substance biosynthetic process^c
has sub-classes: cellular macromolecule biosynthetic process^c

macromolecule metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043170

has super-classes: organic substance metabolic process^c
has sub-classes: cellular macromolecule metabolic process^c, gene expression^c, macromolecule biosynthetic process^c, macromolecule modification^c, nucleic acid metabolic process^c, protein metabolic process^c

macromolecule methylation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043414

has super-classes: metabolic process^c; macromolecule modification^c; cellular macromolecule metabolic process^c
has sub-classes: DNA methylation^c

macromolecule modification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043412

has super-classes: macromolecule metabolic process^c
has sub-classes: DNA modification^c, macromolecule methylation^c, protein modification process^c

macrophage dendritic cell progenitor^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002009

is equivalent to: hematopoietic oligopotent progenitor cell^c and (capable of^op some monocyte differentiation^c) and (capable of^op some myeloid dendritic cell differentiation^c)
has super-classes: myeloid cell^c; hematopoietic oligopotent progenitor cell^c; precursor cell^c; develops from^op some granulocyte monocyte progenitor cell^c; capable of^op some myeloid dendritic cell differentiation^c; capable of^op some monocyte differentiation^c

macrophage differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030225

has super-classes: myeloid leukocyte differentiation^c

Mafa{tm1.1Rwst} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000228

has super-classes: mouse strain^c

main group element atom^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33318

has super-classes: atom^c
has sub-classes: phosphorus atom^c

main group molecular entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33579

has super-classes: molecular entity^c
has sub-classes: hydroxides^c, p-block molecular entity^c

maintaining cell culture^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600024

has super-classes: material maintenance^c; achieves_planned_objective^op some material maintenance objective^c; has_specified_input^op some culture medium^c or cell freezing medium^c; has_specified_output^op some cultured cell population^c; has_specified_input^op some cultured cell population^c

major salivary gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001829

has super-classes: saliva-secreting gland^c; lateral structure^c
has sub-classes: parotid gland^c, submandibular gland^c

male^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000384

has super-classes: phenotypic sex^c

male accessory sex gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0010147

has super-classes: male reproductive gland^c
has sub-classes: male preputial gland^c, prostate gland^c

male preputial gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005301

has super-classes: preputial gland^c; male accessory sex gland^c

male reproductive gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005399

has super-classes: sex gland^c
has sub-classes: male accessory sex gland^c, seminal vesicle^c

mammary gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001911

has super-classes: ectoderm-derived structure^c; exocrine gland of integumental system^c

mandible^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001684

has super-classes: bone element^c; dentary^c

manufacturer role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000571

has super-classes: role^c; inheres in^op some Homo sapiens^c or organization^c; realized in^op only manufacturing^c
has sub-classes: array manufacturer role^c

manufacturing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000457

is equivalent to: achieves_planned_objective^op some manufacturing objective^c
has super-classes: material processing^c; has_specified_output^op some processed material^c; has_specified_input^op some material entity^c

manufacturing objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000458

has super-classes: material transformation objective^c

mass analyzer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000345

has super-classes: measurement device^c; material separation device^c; has function^op some measure function^c; has function^op some material separation function^c

mass density unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000052

has super-classes: measurement unit label^c
has sub-classes: gram per deciliter^c, gram per liter^c, milligram per milliliter^c

mass percentage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000163

has super-classes: concentration unit^c; percent^c

mass spectrometer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000049

has super-classes: measurement device^c; (has part^op some mass analyzer^c) and (has part^op some ion source^c) and (has part^op some ion detector^c); bearer of^op some device setting^c; has_supplier^op some Homo sapiens^c or organization^c; has function^op some measure function^c
has sub-classes: tandem mass spectrometer^c

mass unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000002

has super-classes: measurement unit label^c
has sub-classes: gram^c, kilogram^c, microgram^c, milligram^c, nanogram^c, picogram^c

mass volume percentage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000164

has super-classes: concentration unit^c; percent^c

massively parallel signature sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ERO_0001211

has super-classes: DNA sequencing by ligation^c

mast/stem cell growth factor receptor^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000002065

has super-classes: protein^c

matched pairs design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500005

has super-classes: study design^c

material anatomical entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000465

has super-classes: anatomical entity^c
has sub-classes: anatomical structure^c, embryonic structure^c, organism substance^c

material combination^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000652

is equivalent to: achieves_planned_objective^op some material combination objective^c
has super-classes: material processing^c; has_specified_output^op some material entity^c; has_specified_input^op some material entity^c
has sub-classes: adding a material entity into a target^c, pooling specimens^c

material combination objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000686

has super-classes: material transformation objective^c
has sub-classes: adding material objective^c

material component separation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600014

is equivalent to: achieves_planned_objective^op some material separation objective^c
has super-classes: material processing^c; has_specified_output^op some material entity^c; has_specified_input^op some material entity^c
has sub-classes: cell collecting^c, cell culture splitting^c, centrifugation^c, concentrate^c, excision^c, extraction^c, immunoprecipitation^c, material portioning^c, purification^c

material entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000040

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: independent continuant^c
has sub-classes: cell^c, cellular_component^c, chemical entity^c, environmental material^c, enzyme^c, fiat object^c, gross anatomical part^c, growth environment^c, material to be added^c, object^c, object aggregate^c, organism^c, organization^c, pancreatic material^c, population^c, processed material^c, specimen^c, target of material addition^c
is in domain of: has 2D boundary^op, has_supplier^op, is_manufactured_by^op, not_produce^op, produced by^op, produces^op, produces_high_amount^op, produces_low_amount^op
is in range of: not_produce^op, produced by^op, produces^op, produces_high_amount^op, produces_low_amount^op
is disjoint with: immaterial entity^c

material maintenance^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000838

is equivalent to: achieves_planned_objective^op some material maintenance objective^c
has super-classes: planned process^c
has sub-classes: maintaining cell culture^c, storage^c

material maintenance objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000806

has super-classes: objective specification^c

material portioning^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600018

has super-classes: material component separation^c; achieves_planned_objective^op some portioning objective^c

material processing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000094

is equivalent to: achieves_planned_objective^op some material transformation objective^c
has super-classes: planned process^c; has_specified_input^op only material entity^c; has_specified_input^op some material entity^c; has_specified_output^op some processed material^c; has_specified_output^op only material entity^c
has sub-classes: addition of molecular label^c, artificially induced reverse transcription^c, cell culture expansion^c, cell permeabilization^c, cross linking^c, dissection^c, enzymatic amplification^c, enzymatic cleavage^c, enzymatic ligation^c, establishing cell culture^c, genetic transformation^c, histological sample preparation^c, immobilization^c, irradiation^c, killing^c, library preparation^c, manufacturing^c, material combination^c, material component separation^c, nucleic acid hybridization^c, staining^c, washing^c

material sample^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000747

is equivalent to: material entity^c and (has role^op some material sample role^c)
has super-classes: specimen^c
has sub-classes: sample from organism^c

material sample role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000740

has super-classes: specimen role^c

material separation device^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000932

is equivalent to: has function^op some material separation function^c
has super-classes: device^c
has sub-classes: centrifuge^c, droplet sorter^c, flow cytometer sorter^c, mass analyzer^c, microtome^c, obscuration bar^c, optical filter^c

material separation function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000372

has super-classes: function^c
has sub-classes: filter function^c, sort function^c

material separation objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000639

is equivalent to: portioning objective^c or separation into different composition objective^c
has super-classes: material transformation objective^c
has sub-classes: portioning objective^c, separation into different composition objective^c

material supplier role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000018

has super-classes: service provider role^c

material to be added^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_1110108

is equivalent to: has role^op some material to be added role^c
has super-classes: material entity^c
has sub-classes: cloning vector^c

material to be added role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000319

has super-classes: role^c; realized in^op only adding a material entity into a target^c
has sub-classes: biological vector role^c

material transformation objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000456

has super-classes: objective specification^c
has sub-classes: genetic transformation objective^c, manufacturing objective^c, material combination objective^c, material separation objective^c

mating type^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001895

has super-classes: biological sex^c
has sub-classes: bacterial mating type^c, yeast mating type^c

mature^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001701

has super-classes: maturity^c

maturity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000261

has super-classes: organismal quality^c
has sub-classes: immature^c, mature^c

measure function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000453

has super-classes: function^c; function of^op some processed material^c; realized in^op only has_specified_output^op some measurement datum^c
has sub-classes: image acquisition function^c

measured expression level^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000101

has super-classes: measurement datum^c

measurement datum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000109

has super-classes: data item^c; has value specification^op some value specification^c
has sub-classes: measured expression level^c, scalar measurement datum^c, sequence data^c
is in domain of: is quality measurement of^op

measurement device^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000832

is equivalent to: device^c and (has function^op some measure function^c)
has super-classes: device^c
has sub-classes: DNA sequencer^c, centrifuge^c, cytometer^c, image creation device^c, ion detector^c, mass analyzer^c, mass spectrometer^c, photodetector^c, spectrophotometer^c

measurement unit label^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000003

has super-classes: datum label^c
has sub-classes: International Unit^c, base unit^c, bit^c, concentration unit^c, dimensionless unit^c, length unit^c, light unit^c, mass density unit^c, mass unit^c, radiation unit^c, substance unit^c, temperature unit^c, time unit^c, volume unit^c
is in range of: has measurement unit label^op

mechanical function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000379

has super-classes: function^c

MeDIP-seq assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000693

has super-classes: DNA methylation profiling assay^c; assay using chromatin immunoprecipitation^c; sequencing assay^c; has_specified_input^op some deoxyribonucleic acid^c and (has role^op some evaluant role^c); achieves_planned_objective^op some assay objective^c; has part^op some Helicos sequencing^c or SOLiD sequencing^c or Solexa sequencing^c or pyrosequencing^c; has_specified_output^op some sequence data^c and (is about^op some primary structure of DNA macromolecule^c and (is about^op some regulation of DNA methylation^c) and (is about^op some deoxyribonucleic acid^c and (has quality^op some DNA residue methylation^c))); has_specified_output^op some sequence data^c and (is about^op some regulation of DNA methylation^c); has part^op some immunoprecipitation^c; has part^op some library preparation^c

medulla oblongata^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001896

has super-classes: organ part^c; ectoderm-derived structure^c; structure with developmental contribution from neural crest^c

medulla of thymus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002124

has super-classes: mixed endoderm/mesoderm-derived structure^c; compound organ component^c

medullary thymic epithelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002365

is equivalent to: epithelial cell^c and (part of^op some medulla of thymus^c)
has super-classes: epithelial cell of thymus^c; part of^op some medulla of thymus^c

megakaryocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000556

Megakaryocytes are reportedly CD181-positive and CD182-positive.

is equivalent to: myeloid cell^c and (part of^op some bone marrow^c) and (bearer of^op some euploid^c)
has super-classes: myeloid cell^c; bone marrow hematopoietic cell^c; bearer of^op some euploid^c; develops from^op some megakaryocyte progenitor cell^c; part of^op some bone marrow^c

megakaryocyte differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030219

has super-classes: hematopoietic progenitor cell differentiation^c; myeloid cell differentiation^c

megakaryocyte progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000553

Lineage negative is described here as CD2-negative, CD3-negative, CD4-negative, CD5-negative, CD8a-negative, CD14-negative, CD19-negative, CD20-negative, CD56-negative, Ly6g-negative, and Ter119-negative.

is equivalent to: myeloid lineage restricted progenitor cell^c and (capable of^op some endomitotic cell cycle^c) and (capable of^op some megakaryocyte differentiation^c) and (lacks_plasma_membrane_part^op some CD19 molecule^c) and (lacks_plasma_membrane_part^op some CD4 molecule^c) and (lacks_plasma_membrane_part^op some integrin alpha-M^c) and (lacks_plasma_membrane_part^op some CD3 epsilon^c) and (lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c) and (lacks_plasma_membrane_part^op some CD2 molecule^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c) and (lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c) and (lacks_plasma_membrane_part^op some CD14 molecule^c) and (lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c) and (lacks_plasma_membrane_part^op some lymphocyte antigen 76^c)
has super-classes: myeloid cell^c; myeloid lineage restricted progenitor cell^c; lacks_plasma_membrane_part^op some CD19 molecule^c; lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c; lacks_plasma_membrane_part^op some CD14 molecule^c; capable of^op some megakaryocyte differentiation^c; lacks_plasma_membrane_part^op some CD4 molecule^c; lacks_plasma_membrane_part^op some CD2 molecule^c; develops from^op some megakaryocyte-erythroid progenitor cell^c; lacks_plasma_membrane_part^op some CD3 epsilon^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c; lacks_plasma_membrane_part^op some lymphocyte antigen 76^c; lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c; capable of^op some endomitotic cell cycle^c; lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c; lacks_plasma_membrane_part^op some integrin alpha-M^c

megakaryocyte-erythroid progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000050

MEPs are reportedly CD19-negative, CD34-negative, CD45RA-negative, CD110-positive, CD117-positive, and SCA1-negative and reportedly express the transcription factors GATA-1 and NF-E2.

is equivalent to: hematopoietic oligopotent progenitor cell^c and (capable of^op some erythrocyte differentiation^c) and (capable of^op some megakaryocyte differentiation^c)
has super-classes: myeloid cell^c; hematopoietic oligopotent progenitor cell^c; precursor cell^c; capable of^op some megakaryocyte differentiation^c; capable of^op some erythrocyte differentiation^c; develops from^op some common myeloid progenitor^c

melanoblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000541

Derived from UBERON:0002342 neural crest.

has super-classes: non-terminally differentiated cell^c; somatic cell^c; develops from^op some migratory neural crest cell^c

melanocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000148

is equivalent to: pigment cell^c and (has part^op some melanosome^c) and (develops from^op some melanoblast^c)
has super-classes: pigment cell^c; somatic cell^c; develops from^op some melanoblast^c; has part^op some melanosome^c

melanosome^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0042470

has super-classes: cytoplasmic membrane-bounded vesicle^c

membrane part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044425

has super-classes: cellular_component^c
has sub-classes: plasma membrane part^c

membrane-bounded organelle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043227

has super-classes: organelle^c
has sub-classes: intracellular membrane-bounded organelle^c, membrane-bounded vesicle^c

membrane-bounded vesicle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0031988

has super-classes: vesicle^c; membrane-bounded organelle^c
has sub-classes: cytoplasmic membrane-bounded vesicle^c

membrane-spanning 4-domains subfamily A member 1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001289

has super-classes: protein^c

mesenchymal stem cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000134

Many but not all mesenchymal cells derive from the mesoderm. MSCs are reportedly CD3-negative, CD4-negative, CD5-negative, CD8-negative, CD11a-negative, CD11b-negative, CD14-negative, CD19-negative, CD29-positive, CD31-negative, CD34-negative, CD38-negative, CD40-negative, CD44-positive, CD45-negative, CD49-positive, CD54-positive, CD66b-negative, CD79a-negative, CD80-negative, CD102-positive, CD106-positive, CD117-positive, CD121a-positive, CD121b-positive, CD123-positive, CD124-positive, CD133-negative, CD146-positive, CD166-positive, CD271-positive, B220-negative, Gr1-negative, MHCI-positive, MHCII-negative, SSEA4-negative, sca1-positive, Ter119-negative, and glycophorin A-negative. Cultured MSCs are capable of producing stem cell factor, IL7, IL8, IL11, TGF-beta, cofilin, galectin-1, laminin-receptor 1, cyclophilin A, and MMP-2.

is equivalent to: connective tissue cell^c and (has plasma membrane part^op some endoglin^c) and (has plasma membrane part^op some 5'-nucleotidase^c) and (has plasma membrane part^op some Thy-1 membrane glycoprotein^c) and (capable of^op some osteoblast differentiation^c) and (capable of^op some cell migration^c) and (capable of^op some neuron differentiation^c) and (capable of^op some epithelial cell differentiation^c) and (capable of^op some fat cell differentiation^c) and (capable of^op some cardiac muscle cell differentiation^c) and (capable of^op some chondroblast differentiation^c) and (lacks_plasma_membrane_part^op some MHC class II protein complex^c) and (lacks_plasma_membrane_part^op some CD34 molecule^c) and (lacks_plasma_membrane_part^op some receptor-type tyrosine-protein phosphatase C^c)
has super-classes: multi fate stem cell^c; motile cell^c; connective tissue cell^c; capable of^op some chondroblast differentiation^c; capable of^op some cardiac muscle cell differentiation^c; capable of^op some osteoblast differentiation^c; capable of^op some cell migration^c; has plasma membrane part^op some 5'-nucleotidase^c; capable of^op some fat cell differentiation^c; lacks_plasma_membrane_part^op some CD34 molecule^c; lacks_plasma_membrane_part^op some receptor-type tyrosine-protein phosphatase C^c; has plasma membrane part^op some endoglin^c; capable of^op some neuron differentiation^c; lacks_plasma_membrane_part^op some MHC class II protein complex^c; capable of^op some epithelial cell differentiation^c; has plasma membrane part^op some Thy-1 membrane glycoprotein^c
has sub-classes: angioblastic mesenchymal cell^c

mesentery of oesophagus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003283

has super-classes: serous membrane^c

meso-epithelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002078

has super-classes: epithelial cell^c; somatic cell^c; develops from^op some mesodermal cell^c
has sub-classes: endothelial cell^c

meso-epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0012275

has super-classes: epithelium^c; mesoderm-derived structure^c
has sub-classes: endothelium^c

mesoderm^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000926

has super-classes: germ layer^c

mesoderm-derived structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004120

has super-classes: anatomical structure^c
has sub-classes: adrenal cortex^c, adrenal/interrenal gland^c, blood vessel^c, bone of free limb or fin^c, dermal skeletal element^c, diaphragm^c, heart^c, hemopoietic organ^c, hemopoietic tissue^c, hypodermis^c, limb endochondral element^c, meso-epithelium^c, mixed endoderm/mesoderm-derived structure^c, muscle tissue^c, reproductive structure^c, segment of aorta^c, serous membrane^c, skeletal muscle organ^c, umbilical cord^c, urinary bladder^c

mesodermal cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000222

has super-classes: embryonic cell^c; part of^op some mesoderm^c
has sub-classes: embryonic blood vessel endothelial progenitor cell^c

metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0008152

has super-classes: biological_process^c
has sub-classes: biosynthetic process^c, cellular metabolic process^c, cellular nitrogen compound metabolic process^c, macromolecule methylation^c, organic substance metabolic process^c, primary metabolic process^c, single-organism metabolic process^c

metabolising cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000181

has super-classes: native cell^c
has sub-classes: hepatocyte^c

meter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000008

has super-classes: length unit^c; base unit^c

methodology testing objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000208

has super-classes: objective specification^c
has sub-classes: hardware testing objective^c, protocol testing objective^c, software testing objective^c

methylation-sensitive restriction enzyme sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001861

has super-classes: DNA sequencing^c; DNA methylation profiling by high throughput sequencing assay^c; achieves_planned_objective^op some epigenetic modification identification objective^c; has participant^op some DNA sequencer^c; has_specified_output^op some DNA sequence data^c and (is about^op some regulation of DNA methylation^c); has_specified_input^op some deoxyribonucleic acid^c and (has role^op some evaluant role^c); has part^op some specific enzymatic cleavage^c; has part^op some library preparation^c; has part^op some DNA sequencing^c

MHC class II protein complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0042613

has super-classes: MHC protein complex^c

MHC protein complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0042611

has super-classes: protein complex^c; plasma membrane part^c
has sub-classes: MHC class II protein complex^c

microarray^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400147

has super-classes: assay array^c
has sub-classes: DNA microarray^c, protein microarray^c

microarray platform^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000052

has super-classes: environmental control device^c; has part^op some microarray^c; has function^op some environment control function^c

microarray wash station^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400119

has super-classes: environmental control device^c; has function^op some environment control function^c

micrococcal nuclease digestion followed by high throughput sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001924

has super-classes: sequencing assay^c; has part^op some non specific enzymatic cleavage^c; has participant^op some DNA sequencer^c; realizes^op some evaluant role^c and (role of^op some deoxyribonucleic acid^c); has_specified_output^op some DNA sequence data^c; has part^op some library preparation^c; achieves_planned_objective^op some protein and DNA interaction identification objective^c

microgram^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000023

has super-classes: mass unit^c

microliter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000101

has super-classes: volume unit^c

micrometer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000017

has super-classes: length unit^c

micromolar^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000064

has super-classes: unit of molarity^c

micromole^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000039

has super-classes: substance unit^c

microRNA profiling assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001926

is equivalent to: transcription profiling assay^c and (has_specified_output^op some measured expression level^c and (is about^op some miRNA^c))
has super-classes: transcription profiling assay^c; realizes^op some evaluant role^c and (role of^op some ribonucleic acid^c)
has sub-classes: microRNA profiling by array assay^c, microRNA profiling by high throughput sequencing assay^c

microRNA profiling by array assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001335

has super-classes: microRNA profiling assay^c; has participant^op some DNA microarray^c; has_specified_output^op some measured expression level^c and (is about^op some miRNA^c); achieves_planned_objective^op some transcription profiling identification objective^c; has_specified_input^op some specimen^c and (has part^op some ribonucleic acid^c); realizes^op some analyte role^c and (role of^op some ribonucleic acid^c)

microRNA profiling by array design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001323

has super-classes: transcription profiling design^c; is concretized as^op some realized in^op some (has part^op some microRNA profiling by array assay^c) and (has participant^op some DNA microarray^c); has part^op some transcription profiling identification objective^c

microRNA profiling by high throughput sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001922

has super-classes: RNA-seq assay^c; microRNA profiling assay^c; has part^op some library preparation^c; has_specified_output^op some measured expression level^c and (is about^op some miRNA^c); realizes^op some evaluant role^c and (role of^op some ribonucleic acid^c)

microsecond^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000029

has super-classes: time unit^c

microtome^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400168

has super-classes: material separation device^c; has function^op some mechanical function^c; has function^op some material separation function^c

midbrain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001891

has super-classes: regional part of brain^c; structure with developmental contribution from neural crest^c

migratory neural crest cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000333

has super-classes: motile cell^c; embryonic cell^c; develops from^op some premigratory neural crest cell^c

milligram^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000022

has super-classes: mass unit^c

milligram per milliliter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000176

has super-classes: mass density unit^c

milliliter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000098

has super-classes: volume unit^c

milliliter per liter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000207

has super-classes: volume per unit volume^c

millimeter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000016

has super-classes: length unit^c

millimolar^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000063

has super-classes: unit of molarity^c

millisecond^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000028

has super-classes: time unit^c

MIN6^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002829

has super-classes: immortal animal cell line cell^c

minute^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000031

has super-classes: time unit^c

MIP-GFP mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000260

has super-classes: stem cell derived cell line^c

miRNA^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000276

has super-classes: ncRNA^c

miRNA_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001265

has super-classes: ncRNA_gene^c

mixed ectoderm/mesoderm/endoderm-derived structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000078

has super-classes: mixed endoderm/mesoderm-derived structure^c; ectoderm-derived structure^c
has sub-classes: dentary^c

mixed endoderm/mesoderm-derived structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000077

has super-classes: endoderm-derived structure^c; mesoderm-derived structure^c
has sub-classes: medulla of thymus^c, mixed ectoderm/mesoderm/endoderm-derived structure^c, pharyngeal arch artery^c, thymus^c, yolk sac^c

mixed sex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001338

For example a mixture of females and male or males and hermaphrodites.

has super-classes: population quality^c

molar^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000062

has super-classes: unit of molarity^c

mole^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000013

has super-classes: substance unit^c; base unit^c

molecular entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_23367

has super-classes: chemical entity^c
has sub-classes: ion^c, main group molecular entity^c, molecular label^c, polyatomic entity^c
is in domain of: has concentration^op

molecular feature identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000131

has super-classes: biological feature identification objective^c
has sub-classes: DNA replication identification objective^c, chromosome conformation identification objective^c, epigenetic modification identification objective^c, targets and roles of transcriptional regulators objective^c, transcription profiling identification objective^c

molecular label^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/REO_0000280

has super-classes: molecular entity^c

molecular label role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/REO_0000171

has super-classes: role^c

molecular quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002182

has super-classes: physical object quality^c
has sub-classes: DNA residue methylation^c, affinity^c, concentration of^c, polymer_attribute^c

molecular-labeled material^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001936

is equivalent to: material entity^c and (has part^op some molecular label^c) and (is_specified_output_of^op some addition of molecular label^c)
has super-classes: processed material^c
has sub-classes: labeled specimen^c

molecular_function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0003674

has super-classes: function^c
has sub-classes: bicarbonate transmembrane transporter activity^c, catalytic activity^c, sequence-specific DNA binding^c

molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_25367

has super-classes: polyatomic entity^c
has sub-classes: cyclic compound^c, organic molecule^c

monoamine transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0015844

has super-classes: single-organism transport^c; organic substance transport^c; nitrogen compound transport^c
has sub-classes: catecholamine transport^c, serotonin transport^c

monoblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000040

Morphology: mononuclear cell, diameter 12-20 _M, non-granular, N/C ratio 3/1 - 4/1; markers: CD11b (shared with many other myeloid cells); location: Adult: bone marrow; fetal: liver, Yolk Sac; role or process: hematopoiesis, monocyte development; lineage: hematopoietic, myeloid.

is equivalent to: monopoietic cell^c and (has part^op some basophilic cytoplasm^c) and (has part^op some euchromatin^c) and (has part^op some nucleolus^c) and (has plasma membrane part^op some integrin alpha-M^c) and (capable of^op some monocyte differentiation^c)
has super-classes: myeloid cell^c; monopoietic cell^c; has part^op some nucleolus^c; capable of^op some monocyte differentiation^c; develops from^op some macrophage dendritic cell progenitor^c; has part^op some euchromatin^c; has part^op some basophilic cytoplasm^c; has plasma membrane part^op some integrin alpha-M^c

Monoclonal aequorea victoria Green Fluorescent Protein raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000334

has super-classes: monoclonal antibody^c

monoclonal antibody^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/REO_0000501

has super-classes: antibody reagent^c
has sub-classes: Monoclonal aequorea victoria Green Fluorescent Protein raised in mouse^c, Monoclonal chicken Chick HNF3Beta raised in mouse^c, Monoclonal chicken Islet-1 raised in mouse^c, Monoclonal chicken Nkx2.2 raised in mouse^c, Monoclonal chicken Pax6 raised in mouse^c, Monoclonal human Alpha cells raised in mouse^c, Monoclonal human Alpha cells raised in mouse^c, Monoclonal human Alpha cells raised in mouse^c, Monoclonal human C-peptide raised in rat^c, Monoclonal human CD142 raised in mouse^c, Monoclonal human Cd31 (PECAM1) raised in mouse^c, Monoclonal human Chromogranin A raised in mouse^c, Monoclonal human Cytokeratin 7 raised in mouse^c, Monoclonal human DDR1 raised in mouse^c, Monoclonal human Disp2 raised in mouse^c, Monoclonal human Disp2 raised in mouse^c, Monoclonal human E-cadherin raised in mouse^c, Monoclonal human FXYD2 raised in mouse^c, Monoclonal human Gallbladder mucosal epithelium raised in mouse^c, Monoclonal human Gallbladder mucosal epithelium raised in mouse^c, Monoclonal human Gallbladder mucosal epithelium raised in mouse^c, Monoclonal human Gallbladder mucosal epithelium raised in mouse^c, Monoclonal human Glucagon raised in mouse^c, Monoclonal human Hu ES-Derived Early Endoderm raised in mouse^c, Monoclonal human Hu ES-Derived Early Endoderm raised in mouse^c, Monoclonal human Hu ES-Derived Early Endoderm raised in mouse^c, Monoclonal human Insulin raised in mouse^c, Monoclonal human Muc1 raised in hamster (armenian)^c, Monoclonal human PECAM-1 raised in mouse^c, Monoclonal human Pancreatic duct cells raised in mouse^c, Monoclonal human Pancreatic duct cells raised in mouse^c, Monoclonal human Pancreatic duct cells raised in mouse^c, Monoclonal human Pancreatic endocrine cells raised in mouse^c, Monoclonal human Pancreatic endocrine cells raised in mouse^c, Monoclonal human Pancreatic endocrine cells raised in mouse^c, Monoclonal human Pancreatic endocrine cells raised in mouse^c, Monoclonal human Pancreatic endocrine cells raised in mouse^c, Monoclonal human Pancreatic endocrine cells raised in mouse^c, Monoclonal human Pancreatic exocrine cells raised in mouse^c, Monoclonal human Pancreatic exocrine cells raised in mouse^c, Monoclonal human Pro-Insulin raised in mouse^c, Monoclonal human Somatostatin raised in mouse^c, Monoclonal human ghrelin raised in mouse^c, Monoclonal mouse BetaTC6 raised in mouse^c, Monoclonal mouse BetaTC6 raised in mouse^c, Monoclonal mouse BetaTC6 raised in mouse^c, Monoclonal mouse Endothelial cells raised in rat^c, Monoclonal mouse Mo ES-Derived Definitive Endoderm raised in rat^c, Monoclonal mouse Mo ES-Derived Definitive Endoderm raised in rat^c, Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c, Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c, Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c, Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c, Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c, Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c, Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c, Monoclonal mouse Ngn3 raised in mouse^c, Monoclonal mouse Ngn3 raised in mouse^c, Monoclonal mouse Pancreatic duct and acinar cells raised in rat^c, Monoclonal mouse Pancreatic duct cells raised in rat^c, Monoclonal mouse Pax4 raised in mouse^c, Monoclonal mouse Pax4 raised in mouse^c, Monoclonal mouse Pax4 raised in mouse^c, Monoclonal mouse smooth muscle actin raised in mouse^c, Monoclonal rat Beta cell, IC2 raised in rat^c, Monoclonal rat CART raised in mouse^c, Monoclonal rat Islet Delta Cells raised in rat^c, Monoclonal rat Nkx6.1 raised in mouse^c, Monoclonal rat Nkx6.1 raised in mouse^c, Monoclonal rat Nkx6.1 raised in mouse^c, Monoclonal rat Nkx6.1 raised in mouse^c, Monoclonal rat PDX1 raised in mouse^c, Monoclonal rat PDX1 raised in mouse^c, Monoclonal rat PDX1 raised in mouse^c, Monoclonal rat Pancreatic Ducts raised in mouse^c, Monoclonal rat Pancreatic Ducts raised in mouse^c, Monoclonal rat Pancreatic Ducts raised in rat^c, Monoclonal rat Shh raised in mouse^c, Monoclonal rat Tuj1 (TUBB3) raised in rabbit^c

Monoclonal chicken Chick HNF3Beta raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002223

has super-classes: monoclonal antibody^c

Monoclonal chicken Islet-1 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000290

has super-classes: monoclonal antibody^c

Monoclonal chicken Nkx2.2 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000288

has super-classes: monoclonal antibody^c

Monoclonal chicken Pax6 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000348

has super-classes: monoclonal antibody^c

Monoclonal human Alpha cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000342

has super-classes: monoclonal antibody^c

Monoclonal human Alpha cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000343

has super-classes: monoclonal antibody^c

Monoclonal human Alpha cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004597

has super-classes: monoclonal antibody^c

Monoclonal human C-peptide raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9003185

has super-classes: monoclonal antibody^c

Monoclonal human CD142 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004133

has super-classes: monoclonal antibody^c

Monoclonal human Cd31 (PECAM1) raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004305

has super-classes: monoclonal antibody^c

Monoclonal human Chromogranin A raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000284

has super-classes: monoclonal antibody^c

Monoclonal human Cytokeratin 7 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000285

has super-classes: monoclonal antibody^c

Monoclonal human DDR1 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000970

has super-classes: monoclonal antibody^c

Monoclonal human Disp2 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000964

has super-classes: monoclonal antibody^c

Monoclonal human Disp2 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000965

has super-classes: monoclonal antibody^c

Monoclonal human E-cadherin raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000323

has super-classes: monoclonal antibody^c

Monoclonal human FXYD2 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004041

has super-classes: monoclonal antibody^c

Monoclonal human Gallbladder mucosal epithelium raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004573

has super-classes: monoclonal antibody^c

Monoclonal human Gallbladder mucosal epithelium raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004574

has super-classes: monoclonal antibody^c

Monoclonal human Gallbladder mucosal epithelium raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004575

has super-classes: monoclonal antibody^c

Monoclonal human Gallbladder mucosal epithelium raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004576

has super-classes: monoclonal antibody^c

Monoclonal human ghrelin raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004563

has super-classes: monoclonal antibody^c

Monoclonal human Glucagon raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000295

has super-classes: monoclonal antibody^c

Monoclonal human Hu ES-Derived Early Endoderm raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000921

has super-classes: monoclonal antibody^c

Monoclonal human Hu ES-Derived Early Endoderm raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000922

has super-classes: monoclonal antibody^c

Monoclonal human Hu ES-Derived Early Endoderm raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000941

has super-classes: monoclonal antibody^c

Monoclonal human Insulin raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000270

has super-classes: monoclonal antibody^c

Monoclonal human Muc1 raised in hamster (armenian)^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004319

has super-classes: monoclonal antibody^c

Monoclonal human Pancreatic duct cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000337

has super-classes: monoclonal antibody^c

Monoclonal human Pancreatic duct cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000338

has super-classes: monoclonal antibody^c

Monoclonal human Pancreatic duct cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004598

has super-classes: monoclonal antibody^c

Monoclonal human Pancreatic endocrine cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000326

has super-classes: monoclonal antibody^c

Monoclonal human Pancreatic endocrine cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000327

has super-classes: monoclonal antibody^c

Monoclonal human Pancreatic endocrine cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000328

has super-classes: monoclonal antibody^c

Monoclonal human Pancreatic endocrine cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000329

has super-classes: monoclonal antibody^c

Monoclonal human Pancreatic endocrine cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000330

has super-classes: monoclonal antibody^c

Monoclonal human Pancreatic endocrine cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000341

has super-classes: monoclonal antibody^c

Monoclonal human Pancreatic exocrine cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000339

has super-classes: monoclonal antibody^c

Monoclonal human Pancreatic exocrine cells raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000340

has super-classes: monoclonal antibody^c

Monoclonal human PECAM-1 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000286

has super-classes: monoclonal antibody^c

Monoclonal human Pro-Insulin raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000301

has super-classes: monoclonal antibody^c

Monoclonal human Somatostatin raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000296

has super-classes: monoclonal antibody^c

Monoclonal mouse BetaTC6 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000821

has super-classes: monoclonal antibody^c

Monoclonal mouse BetaTC6 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000961

has super-classes: monoclonal antibody^c

Monoclonal mouse BetaTC6 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000962

has super-classes: monoclonal antibody^c

Monoclonal mouse Endothelial cells raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000945

has super-classes: monoclonal antibody^c

Monoclonal mouse Mo ES-Derived Definitive Endoderm raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000344

has super-classes: monoclonal antibody^c

Monoclonal mouse Mo ES-Derived Definitive Endoderm raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000345

has super-classes: monoclonal antibody^c

Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000901

has super-classes: monoclonal antibody^c

Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000903

has super-classes: monoclonal antibody^c

Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000904

has super-classes: monoclonal antibody^c

Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000905

has super-classes: monoclonal antibody^c

Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000906

has super-classes: monoclonal antibody^c

Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000907

has super-classes: monoclonal antibody^c

Monoclonal mouse Mo ES-Derived Early Endoderm raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000908

has super-classes: monoclonal antibody^c

Monoclonal mouse Ngn3 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000304

has super-classes: monoclonal antibody^c

Monoclonal mouse Ngn3 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000305

has super-classes: monoclonal antibody^c

Monoclonal mouse Pancreatic duct and acinar cells raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000943

has super-classes: monoclonal antibody^c

Monoclonal mouse Pancreatic duct cells raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000942

has super-classes: monoclonal antibody^c

Monoclonal mouse Pax4 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004130

has super-classes: monoclonal antibody^c

Monoclonal mouse Pax4 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004131

has super-classes: monoclonal antibody^c

Monoclonal mouse Pax4 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004132

has super-classes: monoclonal antibody^c

Monoclonal mouse smooth muscle actin raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000278

has super-classes: monoclonal antibody^c

Monoclonal rat Beta cell, IC2 raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004134

has super-classes: monoclonal antibody^c

Monoclonal rat CART raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000974

has super-classes: monoclonal antibody^c

Monoclonal rat Islet Delta Cells raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000299

has super-classes: monoclonal antibody^c

Monoclonal rat Nkx6.1 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000307

has super-classes: monoclonal antibody^c

Monoclonal rat Nkx6.1 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000308

has super-classes: monoclonal antibody^c

Monoclonal rat Nkx6.1 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000309

has super-classes: monoclonal antibody^c

Monoclonal rat Nkx6.1 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000310

has super-classes: monoclonal antibody^c

Monoclonal rat Pancreatic Ducts raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000297

has super-classes: monoclonal antibody^c

Monoclonal rat Pancreatic Ducts raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000298

has super-classes: monoclonal antibody^c

Monoclonal rat Pancreatic Ducts raised in rat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000300

has super-classes: monoclonal antibody^c

Monoclonal rat PDX1 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000316

has super-classes: monoclonal antibody^c

Monoclonal rat PDX1 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000317

has super-classes: monoclonal antibody^c

Monoclonal rat PDX1 raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000318

has super-classes: monoclonal antibody^c

Monoclonal rat Shh raised in mouse^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002222

has super-classes: monoclonal antibody^c

Monoclonal rat Tuj1 (TUBB3) raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004316

has super-classes: monoclonal antibody^c

monocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000576

Morphology: Mononuclear cell, diameter, 14 to 20 _M, N/C ratio 2:1-1:1. Nucleus may appear in variety of shapes: round, kidney, lobulated, or convoluted. Fine azurophilic granules present; markers: CD11b (shared with other myeloid cells), human: CD14, mouse: F4/80-mid,GR1-low; location: Blood, but can be recruited into tissues; role or process: immune & tissue remodelling; lineage: hematopoietic, myeloid.

is equivalent to: myeloid leukocyte^c and (capable of^op some macrophage differentiation^c) and (capable of^op some osteoclast differentiation^c) and (capable of^op some myeloid dendritic cell differentiation^c) and (lacks_part^op some secretory granule^c)
has super-classes: myeloid leukocyte^c; nongranular leukocyte^c; precursor cell^c; develops from^op some promonocyte^c; capable of^op some macrophage differentiation^c; lacks_part^op some secretory granule^c; capable of^op some myeloid dendritic cell differentiation^c; capable of^op some osteoclast differentiation^c

monocyte differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030224

has super-classes: myeloid leukocyte differentiation^c

mononuclear cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000842

is equivalent to: leukocyte^c and (bearer of^op some mononucleate^c) and (lacks_part^op some secretory granule^c)
has super-classes: single nucleate cell^c; nongranular leukocyte^c; bearer of^op some mononucleate^c; lacks_part^op some secretory granule^c

mononucleate^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001407

has super-classes: nucleate quality^c

monopoietic cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002194

is equivalent to: myeloid lineage restricted progenitor cell^c and (capable of^op some monocyte differentiation^c)
has super-classes: myeloid lineage restricted progenitor cell^c; capable of^op some monocyte differentiation^c
has sub-classes: monoblast^c, promonocyte^c

month^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000035

has super-classes: time unit^c

morphology^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000051

has super-classes: physical object quality^c
has sub-classes: islet of Langerhans morphology trait^c, shape^c, size^c, structure^c

motile cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000219

is equivalent to: native cell^c and (capable of^op some cell motility^c)
has super-classes: native cell^c; capable of^op some cell motility^c
has sub-classes: leukocyte^c, mesenchymal stem cell^c, migratory neural crest cell^c

mouse postnatal^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004390

has super-classes: life cycle stage^c
has sub-classes: Theiler stage 27^c, Theiler stage 28^c

mouse prenatal^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002543

has super-classes: life cycle stage^c
has sub-classes: Theiler stage 1^c, Theiler stage 10^c, Theiler stage 11^c, Theiler stage 12^c, Theiler stage 13^c, Theiler stage 14^c, Theiler stage 15^c, Theiler stage 16^c, Theiler stage 17^c, Theiler stage 18^c, Theiler stage 19^c, Theiler stage 2^c, Theiler stage 20^c, Theiler stage 21^c, Theiler stage 22^c, Theiler stage 23^c, Theiler stage 24^c, Theiler stage 25^c, Theiler stage 26^c, Theiler stage 3^c, Theiler stage 4^c, Theiler stage 5^c, Theiler stage 6^c, Theiler stage 7^c, Theiler stage 8^c, Theiler stage 9^c

mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000002

is equivalent to: Mus musculus^c and (is_specified_output_of^op some planned process^c and (achieves_planned_objective^op some selective organism creation objective^c))
has super-classes: Mus musculus^c; selectively maintained organism^c
has sub-classes: 129X1/SvJ mouse strain^c, Arx{tm1Pgr} mouse strain^c, B6-Nkx6-1{tm1Msan} mouse strain^c, B6.129S-Neurog3{tm1(EGFP)Khk}/Mmcd mouse strain^c, B6.129X1-Abcc8{tm1.1Mgn} mouse strain^c, B6.CBA-{Tg(Gcg-cre)1Herr}/Mmnc mouse strain^c, B6.CBA-{Tg(Ipf1-EGFP)1Herr}/Mmnc mouse strain^c, B6.Cg-Tg(Ins1-EGFP)1Hara/J mouse strain^c, B6;D2-Tg(Ins-cre)23Herr mouse strain^c, B6;D2-Tg(NEUROG3-cre)1Herr mouse strain^c, BX129-Neurod1{tmAK71(lacZ)Jle/Mmcd} mouse strain^c, Black and tan, brachyury mouse strain^c, C3H mouse strain^c, C57/CBAJ-Hprt{tm3(Ins2-HBEGF)Ugfm} mouse strain^c, C57/CBAJ-Tg(Ins2- HBEGF){6832Ugfm} mouse strain^c, C57/CBAJ-TgN(Glucagon- hHB EGF)Ugfm mouse strain^c, C57/CBAJ-TgN(Glucagon- rtTA)Ugfm mouse strain^c, C57BL/6 mouse strain^c, Dll1{tm1Hri} mouse strain^c, FVB/NJ-Tg(MIP-Luc-VU)3Pwrs/J mouse strain^c, Foxo1{tm1(DBD)Dac} mouse strain^c, Foxo1{tm1(GFP)Dac} mouse strain^c, Gck{tm1.1Mgn} mouse strain^c, Gck{tm2Mgn} mouse strain^c, Gck{tm3Mgn} mouse strain^c, Ghrl{tm1(Cre-eGFP)Suss} mouse strain^c, Glucagon:rtta mouse strain^c, Gt(ROSA)26Sor{tm1(Ccnd1T286A)Stang} mouse strain^c, Gt(ROSA)26Sor{tm1(GCK*)Ydor} mouse strain^c, Gt(ROSA)26Sor{tm1(Myt1*)Hri} mouse strain^c, Gt(ROSA)26Sor{tm2.1(mix1b-mCherry)Mgn} mouse strain^c, Insm1tm2(GFP.Cre)Mgn/Pdx1tm2(CFP)Mgn mouse strain^c, Insm1tm2Mgn mouse strain^c, Insm1{tm1.1Mgn} mouse strain^c, Mafa{tm1.1Rwst} mouse strain^c, Myt1{tm1.1Ggu} mouse strain^c, NOD mouse^c, NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl} H2-Ab1{tm1Gru} Tg(HLA-DRB1)31Dmz/SzJ mouse strain^c, NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl} Tg(HLA-A/H2-D/B2M)1Dvs/SzJ mouse strain^c, NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl} Tg(Ins1-EGFP/GH1){14Hara}/Sz mouse strain^c, NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl} Tg(Ins2-HBEGF){6832Ugfm}/Sz mouse strain^c, NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl}/SzJ mouse strain^c, NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl}Hprt{tm3(Ins2-HBEGF)Ugfm}/Sz mouse strain^c, NOD.Cg-Prkdc{scid}Il2rg{tm1Wjl}/Sz mouse strain^c, NOD.Cg-Rag1{tm1Mom} Il2rg{tm1Wjl}/Sz mouse strain^c, NOD.Cg-Rag1{tm1Mom} Ins2{Akita} Prf1{tm1Sdz}/Sz mouse strain^c, NOD.Cg-Rag1{tm1Mom}Ins2{Akita}Il2rg{tm1Wjl}/Sz mouse strain^c, NOD.Cg-Rag1{tm1Mom}Ins2{Akita}Il2rg{tm1Wjl}/SzJ mouse strain^c, NOD.Cg-Rag1{tm1Mom}Prf1{tm1Sdz}/SzJ mouse strain^c, Neurog3{tm1.1(nCre)Ggu} mouse strain^c, Neurog3{tm1Ggr} mouse strain^c, Neurog3{tm2(EGFP)Ggr} mouse strain^c, Ngn3{(HA.LCA)} mouse strain^c, Ngn3{T2A.nCreGgu} mouse strain^c, Ngn3{tm1(tTA)Hri} mouse strain^c, Nkx2-2{tm1Suss} mouse strain^c, Nkx2-2{tm2Suss} mouse strain^c, Nkx2-2{tm3Suss} mouse strain^c, Nkx2-2{tm4Suss} mouse strain^c, Nkx2-2{tm5(null)Suss} mouse strain^c, Nkx2.2{(3XHA.Nkx2.2)Suss} mouse strain^c, Nkx2.2{(Cre-Knock-in)} mouse strain^c, Nkx2.2{(Cre.EGFP)Suss} mouse strain^c, Nkx2.2{T2A.cCreGgu} mouse strain^c, Nkx6-1{tm2(flox)Msan} mouse strain^c, OC-1{tm1.1Mga} mouse strain^c, Pax4{(HA.LCA)Ggu} mouse strain^c, Pdx1{(AIVd)Rwst} mouse strain^c, Pdx1{(CFP)Mgn} mouse strain^c, Pdx1{(Cre-ER)} mouse strain^c, Pdx1{(H2B.Apple)Mgn} mouse strain^c, Pdx1{CreMgn} mouse strain^c, Pdx1{tm3Cvw} mouse strain^c, Pdx1{tm4Cvw} mouse strain^c, Pdx1{tm5Cvw} mouse strain^c, Pdx1{tm6Cvw} mouse strain^c, Pparg{tm1.1Mgn} mouse strain^c, Ptf1a{(tdTomato)} mouse strain^c, Ptf1a{tm1(tTAoff)Macd} mouse strain^c, Ptf1a{tm1Mgn} mouse strain^c, Ptf1a{tm2(W298A)Macd} mouse strain^c, Ptf1a{tm2(cre/ESR1)Cvw} mouse strain^c, Ptf1a{tm2(rtTA)Mgn} mouse strain^c, Ptf1a{tm3Cvw} mouse strain^c, Ptf1a{tm3Macd} mouse strain^c, ROSA26{(Nkx2.2.CFP)Suss} mouse strain^c, Rbpjl{tm1(lacZ)Macd} mouse strain^c, Rik{tm1.1Mgn} mouse strain^c, Rik{tm1.3Mgn} mouse strain^c, Rosa26{(-60.IBRE4.TACerulean)Hri} mouse strain^c, Rosa26{(3TF.Cherry)Mgn} mouse strain^c, Rosa26{(Nepn.Cherry)Mgn} mouse strain^c, Rosa26{(Ngn3.CFP)Mgn} mouse strain^c, Rosa26{(Pdx1.YFP)Mgn} mouse strain^c, Rosa26{(R26-228-IBRE4-TA-Cerulean)Hri} mouse strain^c, Rosa26{(Setd5.GFP)Mgn} mouse strain^c, Rosa26{(TetO.NRSF)Msan} mouse strain^c, Rosa26{(TetO.Sox9)Msan} mouse strain^c, Rosa26{(mlre1.IG.Cherry)Fpa} mouse strain^c, Rosa26{(mlre1.WT.Cherry)Fpa} mouse strain^c, Rosa26{228.3TF.GFP-CreMgn} mouse strain^c, Rosa26{228.TOP.CFPHri} mouse strain^c, Rosa26{mIre1.N906A.CherryMgn} mouse strain^c, Rosa26{tm1.1(R26-60-DR5-TA-Cerulean)Mgn} mouse strain^c, Rosa26{tm1.2(R26-228-DR5-TA-Cerulean)Mgn} mouse strain^c, Rosa26{tm1.4(MafA-Cherry)Mgn} mouse strain^c, Rosa26{tm2Mgn} mouse strain^c, Rosa26{tm3Mgn} mouse strain^c, Rosa26{tm4Mgn} mouse strain^c, STOCK Ipf1{tm1Cvw} mouse strain^c, STOCK Ipf1{tm2Cvw}/Mmnc mouse strain^c, STOCK Pdx1{tm1Macd}/J mouse strain^c, STOCK Ptf1a{tm1(cre)Cvw} mouse strain^c, STOCK Tg(Foxa3-cre)1Khk mouse strain^c, STOCK Tg(Ipf1-cre/Esr1)1Dam/Mmcd mouse strain^c, STOCK Tg(Neurog3-cre)1Dam/Mmcd mouse strain^c, STOCK Tg(tetO-Pdx1,lacZ)958.1Macd mouse strain^c, STOCK-Tg(Ipf1-cre)89.1Dam/Mmcd mouse strain^c, Sox17{(GFPCre)Mgn} mouse strain^c, Sox17{tm1.2Mgn} mouse strain^c, Sst{rTTA.LCA.Mgn} mouse strain^c, Tg(Ins1-EGFP/GH1)14Hara mouse strain^c, Tg(Ins1-mRFP)2Ggr mouse strain^c, Tg(Neurog3-IRES-NLS-LacZ)1Ggr mouse strain^c, Tg(Pdx1-Neurog3-ER)1Agb mouse strain^c, Tg(RIP-Cre/ESR1){Ydor} mouse strain^c, Tg(tetO-Ptf1a,lacZ)Macd mouse strain^c, black swiss mouse strain^c, pck{tm1.1Mgn} mouse strain^c

mouth mucosa^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003729

has super-classes: ectoderm-derived structure^c; organ component layer^c
has sub-classes: mucosa of tongue^c

moving average^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200056

has super-classes: averaging data transformation^c; (has_specified_output^op some average value^c) and (achieves_planned_objective^op some averaging objective^c)

mPAC L20 cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000121

has super-classes: immortal animal cell line cell^c

mucosa of tongue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005020

has super-classes: mouth mucosa^c; endoderm-derived structure^c

multi cell part structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005162

has super-classes: anatomical cluster^c
has sub-classes: central nervous system cell part cluster^c, cerebral cortex^c, neuron projection bundle^c

multi fate stem cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000048

is equivalent to: somatic cell^c and (bearer of^op some multipotent^c) and (capable of^op some stem cell division^c)
has super-classes: stem cell^c; somatic cell^c; bearer of^op some multipotent^c; capable of^op some stem cell division^c
has sub-classes: hepatoblast^c, mesenchymal stem cell^c, progenitor cell of endocrine pancreas^c

multi organ part structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0034921

has super-classes: multicellular anatomical structure^c
has sub-classes: occipital region^c, skeletal joint^c

multi-multicellular organism process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044706

has super-classes: multicellular organismal process^c; multi-organism process^c
has sub-classes: female pregnancy^c

multi-organism process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0051704

has super-classes: biological_process^c
has sub-classes: multi-multicellular organism process^c, multi-organism reproductive process^c

multi-organism reproductive process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044703

has super-classes: reproductive process^c; multi-organism process^c
has sub-classes: female pregnancy^c

multi-tissue structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000481

has super-classes: multicellular anatomical structure^c
has sub-classes: compound organ component^c, exocrine pancreas^c, regional part of brain^c

multicellular anatomical structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0010000

has super-classes: anatomical structure^c
has sub-classes: anatomical conduit^c, brain ventricle/choroid plexus^c, cell cluster^c, multi organ part structure^c, multi-tissue structure^c, multicellular organism^c, organ^c, organism subdivision^c, tissue^c

multicellular organism^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000468

has super-classes: multicellular anatomical structure^c
has sub-classes: Fetus^c, embryo^c

multicellular organismal movement^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0050879

has super-classes: single-multicellular organism process^c
has sub-classes: chewing^c

multicellular organismal process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0032501

has super-classes: biological_process^c
has sub-classes: multi-multicellular organism process^c, single-multicellular organism process^c

multicellular organismal reproductive process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0048609

has super-classes: reproductive process^c
has sub-classes: gamete generation^c

multiple testing correction method^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200089

is equivalent to: achieves_planned_objective^op some multiple testing correction objective^c
has super-classes: error correction data transformation^c

multiple testing correction objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000791

has super-classes: error correction objective^c

multiplex ligation-mediated amplification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001914

has super-classes: polymerase chain reaction^c; has part^op some enzymatic ligation^c

multipotent^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001402

has super-classes: cellular potency^c

Murinae^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_39107

has super-classes: Euarchontoglires^c
has sub-classes: Mus musculus^c, Rattus^c

Mus musculus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_10090

has super-classes: Murinae^c
has sub-classes: mouse strain^c

muscle cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000187

has super-classes: contractile cell^c; electrically responsive cell^c; animal cell^c; somatic cell^c; develops from^op some myoblast^c
has sub-classes: striated muscle cell^c

muscle organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001630

has super-classes: anatomical structure^c; organ^c
has sub-classes: diaphragm^c, skeletal muscle organ^c

muscle precursor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000680

is equivalent to: cell^c and (develops into^op some muscle cell^c)
has super-classes: non-terminally differentiated cell^c; somatic cell^c; develops into^op some muscle cell^c; develops from^op some mesodermal cell^c
has sub-classes: myoblast^c

muscle tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002385

has super-classes: tissue^c; mesoderm-derived structure^c
has sub-classes: smooth muscle tissue^c, striated muscle tissue^c

myeloblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000835

is equivalent to: granulocytopoietic cell^c and (has part^op some basophilic cytoplasm^c) and (has part^op some increased nucleus size^c) and (has part^op some euchromatin^c) and (lacks_part^op some azurophil granule^c)
has super-classes: myeloid cell^c; granulocytopoietic cell^c; nucleate cell^c; has part^op some basophilic cytoplasm^c; lacks_part^op some azurophil granule^c; develops from^op some granulocyte monocyte progenitor cell^c; has part^op some euchromatin^c; has part^op some increased nucleus size^c

myelocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002193

has super-classes: myeloid cell^c; granulocytopoietic cell^c; develops from^op some promyelocyte^c

myeloid cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000763

is equivalent to: hematopoietic cell^c and (develops from^op some common myeloid progenitor^c)
has super-classes: hematopoietic cell^c; develops from^op some common myeloid progenitor^c
has sub-classes: erythroid lineage cell^c, granulocyte monocyte progenitor cell^c, macrophage dendritic cell progenitor^c, megakaryocyte^c, megakaryocyte progenitor cell^c, megakaryocyte-erythroid progenitor cell^c, monoblast^c, myeloblast^c, myelocyte^c, myeloid leukocyte^c, platelet^c, promonocyte^c, promyelocyte^c

myeloid cell differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030099

has super-classes: cell differentiation^c
has sub-classes: erythrocyte differentiation^c, megakaryocyte differentiation^c, myeloid leukocyte differentiation^c

myeloid dendritic cell differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043011

has super-classes: leukocyte differentiation^c; myeloid leukocyte differentiation^c; leukocyte activation^c

myeloid leukocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000766

is equivalent to: leukocyte^c and (develops from^op some common myeloid progenitor^c)
has super-classes: leukocyte^c; myeloid cell^c; develops from^op some common myeloid progenitor^c
has sub-classes: granulocyte^c, monocyte^c

myeloid leukocyte differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002573

has super-classes: leukocyte differentiation^c; myeloid cell differentiation^c
has sub-classes: granulocyte differentiation^c, macrophage differentiation^c, monocyte differentiation^c, myeloid dendritic cell differentiation^c, osteoclast differentiation^c

myeloid lineage restricted progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000839

Note that this is a class of cell types, not an identified single cell type.

is equivalent to: hematopoietic lineage restricted progenitor cell^c and (capable of^op some myeloid cell differentiation^c)
has super-classes: hematopoietic lineage restricted progenitor cell^c; precursor cell^c; capable of^op some myeloid cell differentiation^c
has sub-classes: erythroid progenitor cell^c, granulocytopoietic cell^c, megakaryocyte progenitor cell^c, monopoietic cell^c

myeloid neoplasm^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002427

has super-classes: lymphoid neoplasm^c
has sub-classes: acute myeloid leukemia^c, chronic myelogenous leukemia^c

myoblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000056

has super-classes: muscle precursor cell^c
has sub-classes: cardiac myoblast^c

myometrium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001296

has super-classes: organ component layer^c; reproductive structure^c

Myt1{tm1.1Ggu} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000229

has super-classes: mouse strain^c

N-glycosyl compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_21731

has super-classes: organonitrogen compound^c; carbohydrates and carbohydrate derivatives^c
has sub-classes: nucleoside^c

n-to-1 design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500004

has super-classes: cross over design^c

nanogram^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000024

has super-classes: mass unit^c

nanoliter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000102

has super-classes: volume unit^c

nanometer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000018

has super-classes: length unit^c

nanomole^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000041

has super-classes: substance unit^c

nasal cavity epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005384

has super-classes: epithelium^c; respiratory tract epithelium^c; nose epithelium^c
has sub-classes: olfactory epithelium^c

native cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000003

To accommodate unicellular organisms better, 'cell in vivo' has been re-labeled 'native cell' to better represent its intended meaning - that is, that it is a cell in the context of a multicellular organism or in a natural environment. 'Native' is intended to contrast with 'in vitro', which refers to cells or other biological entities that have been intentionally placed in a controlled, non-natural setting for the purpose of study or manipulation. (MAH 1.12.12).

has super-classes: cell^c
has sub-classes: anucleate cell^c, barrier cell^c, contractile cell^c, electrically active cell^c, eukaryotic cell^c, metabolising cell^c, motile cell^c, nucleate cell^c, oxygen accumulating cell^c, polyploid cell^c, precursor cell^c, premigratory neural crest cell^c, secretory cell^c, somatic cell^c, stuff accumulating cell^c

natural killer cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000623

is equivalent to: lymphocyte^c and (capable of^op some natural killer cell mediated immunity^c) and (capable of^op some regulation of immune response^c) and (lacks_plasma_membrane_part^op some CD19 molecule^c) and (lacks_plasma_membrane_part^op some CD3 epsilon^c) and (lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c) and (lacks_plasma_membrane_part^op some CD14 molecule^c)
has super-classes: lymphocyte^c; capable of^op some natural killer cell mediated immunity^c; lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c; capable of^op some regulation of immune response^c; lacks_plasma_membrane_part^op some CD14 molecule^c; lacks_plasma_membrane_part^op some CD3 epsilon^c; develops from^op some pro-NK cell^c; lacks_plasma_membrane_part^op some CD19 molecule^c

natural killer cell mediated immunity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002228

has super-classes: lymphocyte mediated immunity^c; innate immune response^c

ncRNA^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000655

has super-classes: transcript^c
has sub-classes: SRP_RNA^c, long non-coding RNA^c, miRNA^c

ncRNA_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001263

has super-classes: gene^c
has sub-classes: RNase_MRP_RNA_gene^c, RNase_P_RNA_gene^c, lincRNA_gene^c, miRNA_gene^c, rRNA_gene^c, scRNA_gene^c, snRNA_gene^c, snoRNA_gene^c, tRNA_gene^c, telomerase_RNA_gene^c

neoplasm^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0000616

has super-classes: disease^c
has sub-classes: cancer^c, insulinoma^c

Nepn{Cherry} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004154

has super-classes: stem cell derived cell line^c

neprilysin^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001898

has super-classes: protein^c

neural cell adhesion molecule 1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001024

has super-classes: protein^c

neural crest^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002342

has super-classes: ectoderm-derived structure^c; structure with developmental contribution from neural crest^c; germ layer / neural crest^c

neural crest-derived structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0010313

has super-classes: ectoderm-derived structure^c; structure with developmental contribution from neural crest^c
has sub-classes: dorsal root ganglion^c, facial bone^c, parasympathetic ganglion^c, sympathetic ganglion^c

neurectodermal cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000133

has super-classes: ectodermal cell^c

Neurog3{Cre-ER.BAC} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004529

has super-classes: stem cell derived cell line^c

Neurog3{RG.BAC} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004536

has super-classes: stem cell derived cell line^c

Neurog3{tm1.1(nCre)Ggu} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002301

has super-classes: mouse strain^c

Neurog3{tm1Ggr} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000215

has super-classes: mouse strain^c

Neurog3{tm2(EGFP)Ggr} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000222

has super-classes: mouse strain^c

neurogenic differentiation factor 1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000011152

has super-classes: protein^c

neurogenin-3^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000011158

has super-classes: protein^c

neurogenin-3-expressing endocrine progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000051

has super-classes: non-terminally differentiated cell^c; pancreatic cell^c; has part^op some neurogenin-3^c; part of^op some pancreas^c; participates in^op some endocrine pancreas development^c

neurogenin-3-lacking pancreatic progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000052

has super-classes: non-terminally differentiated cell^c; pancreatic cell^c; part of^op some pancreas^c; participates in^op some pancreas development^c; lacks_part^op some neurogenin-3^c

neuron differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030182

has super-classes: cell differentiation^c

neuron projection bundle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000122

has super-classes: multi cell part structure^c
has sub-classes: axon tract^c

neutrophil^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000775

is equivalent to: granulocyte^c and (has plasma membrane part^op some low affinity immunoglobulin gamma Fc region receptor II^c) and (has plasma membrane part^op some leukosialin^c)
has super-classes: granulocyte^c; has plasma membrane part^op some low affinity immunoglobulin gamma Fc region receptor II^c; has plasma membrane part^op some leukosialin^c

neutrophillic cytoplasm^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CP_0000000

has super-classes: cytoplasm^c

NextSeq 500^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002021

has super-classes: DNA sequencer^c; is_manufactured_by^op value Illumina

Ngn3-GFP mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000261

has super-classes: stem cell derived cell line^c

Ngn3{(HA.LCA)} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004145

has super-classes: mouse strain^c

Ngn3{HA.LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004059

has super-classes: stem cell derived cell line^c

Ngn3{T2A.nCreGgu} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004538

has super-classes: mouse strain^c

Ngn3{T2A.nCre} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004489

has super-classes: stem cell derived cell line^c

Ngn3{tm1(tTA)Hri} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000239

has super-classes: mouse strain^c

nitrogen compound transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0071705

has super-classes: transport^c
has sub-classes: amide transport^c, ammonium transport^c, monoamine transport^c

nitrogen molecular entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_51143

has super-classes: p-block molecular entity^c
has sub-classes: nucleobase-containing molecular entity^c, organonitrogen compound^c, primary amide^c

Nkx2-2{tm1Suss} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000240

has super-classes: mouse strain^c

Nkx2-2{tm2Suss} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000232

has super-classes: mouse strain^c

Nkx2-2{tm3Suss} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000231

has super-classes: mouse strain^c

Nkx2-2{tm4Suss} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000241

has super-classes: mouse strain^c

Nkx2-2{tm5(null)Suss} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001321

has super-classes: mouse strain^c

Nkx2.2{(3XHA.Nkx2.2)Suss} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004086

has super-classes: mouse strain^c

Nkx2.2{(Cre-Knock-in)} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004079

has super-classes: mouse strain^c

Nkx2.2{(Cre.EGFP)Suss} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004150

has super-classes: mouse strain^c

Nkx2.2{3XHA.Nkx2.2} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004080

has super-classes: stem cell derived cell line^c

Nkx2.2{cCre-Knock-in} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004078

has super-classes: stem cell derived cell line^c

Nkx2.2{Cherry} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004093

has super-classes: stem cell derived cell line^c

Nkx2.2{Cre.EGFP} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004087

has super-classes: stem cell derived cell line^c

Nkx2.2{LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000257

has super-classes: stem cell derived cell line^c

Nkx2.2{T2A.cCreGgu} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004556

has super-classes: mouse strain^c

Nkx2.2{T2A.cCre} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004527

has super-classes: stem cell derived cell line^c

Nkx6-1{tm2(flox)Msan} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001342

has super-classes: mouse strain^c

NOD mouse^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002547

has super-classes: mouse strain^c

NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl} H2-Ab1{tm1Gru} Tg(HLA-DRB1)31Dmz/SzJ mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004612

has super-classes: mouse strain^c

NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl} Tg(HLA-A/H2-D/B2M)1Dvs/SzJ mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004611

has super-classes: mouse strain^c

NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl} Tg(Ins1-EGFP/GH1){14Hara}/Sz mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000214

has super-classes: mouse strain^c

NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl} Tg(Ins2-HBEGF){6832Ugfm}/Sz mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000209

has super-classes: mouse strain^c

NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl}/SzJ mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004142

has super-classes: mouse strain^c

NOD.Cg-Prkdc{scid} Il2rg{tm1Wjl}Hprt{tm3(Ins2-HBEGF)Ugfm}/Sz mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000210

has super-classes: mouse strain^c

NOD.Cg-Prkdc{scid}Il2rg{tm1Wjl}/Sz mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001262

has super-classes: mouse strain^c

NOD.Cg-Rag1{tm1Mom} Il2rg{tm1Wjl}/Sz mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000212

has super-classes: mouse strain^c

NOD.Cg-Rag1{tm1Mom} Ins2{Akita} Prf1{tm1Sdz}/Sz mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000211

has super-classes: mouse strain^c

NOD.Cg-Rag1{tm1Mom}Ins2{Akita}Il2rg{tm1Wjl}/Sz mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001261

has super-classes: mouse strain^c

NOD.Cg-Rag1{tm1Mom}Ins2{Akita}Il2rg{tm1Wjl}/SzJ mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004143

has super-classes: mouse strain^c

NOD.Cg-Rag1{tm1Mom}Prf1{tm1Sdz}/SzJ mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001421

has super-classes: mouse strain^c

non specific enzymatic cleavage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600023

has super-classes: enzymatic cleavage^c

non-terminally differentiated cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000055

define using PATO mulit-potent or oligopotent?

has super-classes: precursor cell^c; capable of^op some cell differentiation^c
has sub-classes: Insm1-expressing endocrine progenitor cell^c, Insm1-lacking endocrine progenitor cell^c, Ptf1a-expressing multipotent pancreatic cell^c, Ptf1a-lacking pancreatic progenitor cell^c, melanoblast^c, muscle precursor cell^c, neurogenin-3-expressing endocrine progenitor cell^c, neurogenin-3-lacking pancreatic progenitor cell^c

nongranular leukocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002087

is equivalent to: leukocyte^c and (lacks_part^op some secretory granule^c)
has super-classes: leukocyte^c; lacks_part^op some secretory granule^c
has sub-classes: lymphocyte^c, monocyte^c, mononuclear cell^c

normal^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000461

has super-classes: deviation(from_normal)^c

normalization data transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200169

is equivalent to: (has_specified_output^op some normalized data set^c) or (achieves_planned_objective^op some data normalization objective^c)
has super-classes: data transformation^c
has sub-classes: linlog transformation^c, loess transformation^c, lowess transformation^c, quantile transformation^c, replicate analysis^c, total intensity transformation paired^c, total intensity transformation single^c

normalization testing design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001214

has super-classes: study design^c; has part^op some study design independent variable^c and (is about^op some normalization data transformation^c); has part^op some software testing objective^c

normalized data set^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000451

is equivalent to: is_specified_output_of^op some normalization data transformation^c
has super-classes: data set^c

nose epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0019306

has super-classes: epithelium^c; respiratory system epithelium^c; ecto-epithelium^c
has sub-classes: nasal cavity epithelium^c

nuclear RNA extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000862

has super-classes: RNA extract^c; is_specified_output_of^op some nuclear RNA extraction^c

nuclear RNA extraction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000888

has super-classes: RNA extraction^c

nucleate cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002242

is equivalent to: native cell^c and (has part^op some nucleus^c)
has super-classes: native cell^c; has part^op some nucleus^c
has sub-classes: erythroblast^c, lymphocyte^c, myeloblast^c, proerythroblast^c, promyelocyte^c, single nucleate cell^c

nucleate quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001404

has super-classes: cellular quality^c
has sub-classes: anucleate^c, mononucleate^c

nucleic acid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33696

has super-classes: polynucleotide^c
has sub-classes: deoxyribonucleic acid^c, ribonucleic acid^c

nucleic acid extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001010

has super-classes: extract^c; processed specimen^c; has grain^op some nucleic acid^c; (is_specified_output_of^op some nucleic acid extraction^c) and (has role^op some specimen role^c)
has sub-classes: DNA extract^c, RNA extract^c

nucleic acid extraction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0666667

has super-classes: extraction^c; has_specified_output^op some nucleic acid^c; has_specified_input^op some sample from organism^c or organism^c or cultured cell population^c
has sub-classes: DNA extraction^c, RNA extraction^c

nucleic acid hybridization^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302903

has super-classes: material processing^c; realizes^op some function^c and (inheres in^op some hybridization chamber^c)

nucleic acid metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0090304

has super-classes: nucleobase-containing compound metabolic process^c; macromolecule metabolic process^c
has sub-classes: DNA metabolic process^c

nucleic acid template role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000409

has super-classes: reference substance role^c; inheres in^op some nucleic acid^c; realized in^op only polymerase chain reaction^c

nucleobase-containing compound metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006139

has super-classes: cellular aromatic compound metabolic process^c; cellular nitrogen compound metabolic process^c; primary metabolic process^c; heterocycle metabolic process^c; organic cyclic compound metabolic process^c
has sub-classes: nucleic acid metabolic process^c

nucleobase-containing molecular entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_61120

has super-classes: heteroarene^c; nitrogen molecular entity^c
has sub-classes: nucleoside^c, polynucleotide^c

nucleolus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0005730

has super-classes: intracellular non-membrane-bounded organelle^c; intracellular organelle part^c

nucleoside^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33838

has super-classes: N-glycosyl compound^c; oxolanes^c; nucleobase-containing molecular entity^c
has sub-classes: deoxyribonucleoside^c, pyrimidine nucleoside^c

nucleus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0005634

has super-classes: intracellular membrane-bounded organelle^c
has sub-classes: increased nucleus size^c

nucleus of brain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002308

has super-classes: central nervous system cell part cluster^c
has sub-classes: subthalamic nucleus^c, telencephalic nucleus^c

nutrient role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000204

has super-classes: role^c; inheres in^op some material entity^c
has sub-classes: complete nutrient role^c

obese^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MP_0001261

has super-classes: organismal quality^c

object^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000030

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: material entity^c

object aggregate^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000027

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: material entity^c

objective specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000005

has super-classes: directive information entity^c
has sub-classes: assay objective^c, assay validation objective^c, biological feature identification objective^c, data transformation objective^c, decision-theoretic analysis objective^c, material maintenance objective^c, material transformation objective^c, methodology testing objective^c, selective organism creation objective^c, specimen collection objective^c
is in domain of: objective_achieved_by^op
is in range of: achieves_planned_objective^op

obscuration bar^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400078

has super-classes: material separation device^c; has function^op some filter function^c

observation design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0300311

has super-classes: study design^c

obsolescence reason specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000225

is equivalent to: { failed exploratory term , term split , placeholder removed , terms merged , term imported }
has super-classes: data about an ontology part^c
has members: term importedⁿⁱ, term splitⁿⁱ, terms mergedⁿⁱ

Obsolete Class^c back to ToC or Class ToC

IRI: http://www.geneontology.org/formats/oboInOwl#ObsoleteClass

has super-classes: thing^c
has sub-classes: obsolete dependent continuant^c, obsolete_STOCK Tg(Tnpo1-EGFP)6729Hara/Mmmh mouse strain^c, obsolete_disease^c

obsolete dependent continuant^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000005

has super-classes: Obsolete Class^c

obsolete_disease^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_1110055

has super-classes: Obsolete Class^c

obsolete_STOCK Tg(Tnpo1-EGFP)6729Hara/Mmmh mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000021

has super-classes: Obsolete Class^c

OC-1{tm1.1Mga} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000230

has super-classes: mouse strain^c

occipital region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005902

has super-classes: multi organ part structure^c

occurrent^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000003

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: entity^c
has sub-classes: process^c, process boundary^c, spatiotemporal region^c, temporal region^c
is in domain of: has participant^op, occurs in^op
is in range of: participates in^op, temporal relation^op
is disjoint with: continuant^c

olfactory bulb^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002264

has super-classes: regional part of brain^c; structure with developmental contribution from neural crest^c; lateral structure^c

olfactory epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001997

has super-classes: epithelium^c; nasal cavity epithelium^c; pseudostratified ciliated columnar epithelium^c

oligonucleotide synthesizer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400113

has super-classes: environmental control device^c; has function^op some environment control function^c; has function^op some synthesizing function^c

oligopotent^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001401

Less potent than multipotent, often thought of as precursor or progenitor cell status.

has super-classes: cellular potency^c

one-dimensional continuant fiat boundary^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000142

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: continuant fiat boundary^c
is disjoint with: two-dimensional continuant fiat boundary^c, zero-dimensional continuant fiat boundary^c

one-dimensional spatial region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000026

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: spatial region^c
is disjoint with: two-dimensional spatial region^c, zero-dimensional spatial region^c, three-dimensional spatial region^c

one-dimensional temporal region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000038

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: temporal region^c
is disjoint with: zero-dimensional temporal region^c

oocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000023

has super-classes: female germ cell^c; participates in^op some female meiotic division^c

oogenesis^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0048477

has super-classes: gamete generation^c; germ cell development^c

operator variation design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001195

has super-classes: study design^c; has part^op some study design independent variable^c and (is about^op some Homo sapiens^c and (has role^op some worker role^c))

operon identification design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001432

has super-classes: study design^c; has part^op some sequence feature identification objective^c

optical filter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400079

has super-classes: material separation device^c; has function^op some filter function^c

oral gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0010047

has super-classes: exocrine gland^c; gland of gut^c; ectoderm-derived structure^c
has sub-classes: saliva-secreting gland^c

organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000062

has super-classes: multicellular anatomical structure^c
has sub-classes: brain^c, compound organ^c, digestive system element^c, gland^c, hemopoietic organ^c, immune organ^c, lung^c, muscle organ^c, placenta^c, reproductive organ^c, sense organ^c, skeletal element^c, spinal cord^c, tracheobronchial tree^c, trunk region element^c

organ component layer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004923

has super-classes: organ part^c
has sub-classes: cavity lining^c, extraembryonic membrane^c, hypodermis^c, mouth mucosa^c, myometrium^c, retina^c

organ part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000064

has super-classes: anatomical structure^c
has sub-classes: adrenal cortex^c, brain ventricle^c, integumentary adnexa^c, lobe of cerebral hemisphere^c, medulla oblongata^c, organ component layer^c, organ segment^c, pyloric antrum^c, subdivision of tube^c, uterine cervix^c, zone of skin^c

organ section^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0100066

has super-classes: processed material^c; is_specified_output_of^op some histological sample preparation^c or collecting specimen from organism^c; derives from^op some gross anatomical part^c

organ segment^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000063

has super-classes: organ part^c
has sub-classes: segment of aorta^c, segment of colon^c, segment of respiratory tract^c

organellar RNA extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000899

has super-classes: RNA extract^c; is_specified_output_of^op some organellar RNA extraction^c

organellar RNA extraction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000849

has super-classes: RNA extraction^c

organelle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043226

has super-classes: cellular_component^c
has sub-classes: intracellular non-membrane-bounded organelle^c, intracellular organelle^c, membrane-bounded organelle^c, vesicle^c

organelle assembly^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0070925

has super-classes: organelle organization^c; cellular component organization^c
has sub-classes: extracellular exosome assembly^c

organelle membrane^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0031090

has super-classes: cellular_component^c; organelle part^c
has sub-classes: cytoplasmic vesicle membrane^c, secretory granule membrane^c

organelle organization^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006996

has super-classes: cellular process^c; cellular component organization^c
has sub-classes: chromosome organization^c, extracellular exosome assembly^c, female meiotic division^c, organelle assembly^c, single-organism organelle organization^c

organelle part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044422

has super-classes: cellular_component^c
has sub-classes: contractile fiber part^c, intracellular organelle part^c, organelle membrane^c

organic aromatic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33659

has super-classes: cyclic compound^c; organic cyclic compound^c
has sub-classes: heteroarene^c

organic cyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33832

has super-classes: cyclic compound^c; organic molecule^c
has sub-classes: organic aromatic compound^c, organic heterocyclic compound^c

organic cyclic compound metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_1901360

has super-classes: organic substance metabolic process^c
has sub-classes: nucleobase-containing compound metabolic process^c

organic heterobicyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_27171

has super-classes: heterobicyclic compound^c; organic heteropolycyclic compound^c
has sub-classes: azabicycloalkane^c, benzopyrrole^c, thiabicycloalkane^c

organic heterocyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_24532

has super-classes: heteroorganic entity^c; organic cyclic compound^c; heterocyclic compound^c
has sub-classes: heteroarene^c, organic heteromonocyclic compound^c, organic heteropolycyclic compound^c, organonitrogen heterocyclic compound^c, organosulfur heterocyclic compound^c, oxacycle^c

organic heteromonocyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_25693

has super-classes: organic heterocyclic compound^c; heteromonocyclic compound^c
has sub-classes: diazines^c, oxolanes^c

organic heteropentacyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_38164

has super-classes: organic heteropolycyclic compound^c
has sub-classes: Alexa Fluor 532^c, Alexa Fluor 546^c

organic heteropolycyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_38166

has super-classes: organic heterocyclic compound^c; heteropolycyclic compound^c
has sub-classes: organic heterobicyclic compound^c, organic heteropentacyclic compound^c

organic hydroxy compound transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0015850

has super-classes: single-organism transport^c; organic substance transport^c
has sub-classes: catecholamine transport^c, serotonin transport^c

organic molecular entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_50860

has super-classes: p-block molecular entity^c
has sub-classes: biomacromolecule^c, carboxylic acid^c, heteroorganic entity^c, organic molecule^c

organic molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_72695

has super-classes: molecule^c; organic molecular entity^c
has sub-classes: carbonyl compound^c, organic cyclic compound^c

organic substance biosynthetic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_1901576

has super-classes: biosynthetic process^c; organic substance metabolic process^c
has sub-classes: macromolecule biosynthetic process^c

organic substance metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0071704

has super-classes: metabolic process^c
has sub-classes: macromolecule metabolic process^c, organic cyclic compound metabolic process^c, organic substance biosynthetic process^c

organic substance transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0071702

has super-classes: transport^c
has sub-classes: monoamine transport^c, organic hydroxy compound transport^c, peptide transport^c, protein transport^c

organism^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0100026

A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.

is equivalent to: Viruses^c or Bacteria^c or Archaea^c or Eukaryota^c
has super-classes: material entity^c
has sub-classes: Archaea^c, Bacteria^c, Eukaryota^c, Viruses^c, genetically modified organism^c, selectively maintained organism^c
is in domain of: has disease^op
is in range of: is about organism species^op

organism development design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001328

has super-classes: study design^c; has part^op some organism feature identification objective^c and (is about^op some life cycle stage^c and (has participant^op some organism^c))

organism feature identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000268

has super-classes: biological feature identification objective^c

organism part comparison design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001422

has super-classes: study design^c; has part^op some study design independent variable^c and (is about^op some gross anatomical part^c); has part^op some organism feature identification objective^c

organism status comparison design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001377

has super-classes: study design^c; is concretized as^op some realized in^op some assay^c and (has_specified_input^op some pre-mortem specimen^c or post mortem specimen^c); has part^op some biological feature identification objective^c

organism subdivision^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000475

has super-classes: multicellular anatomical structure^c
has sub-classes: digit^c, head^c

organism substance^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000463

has super-classes: material anatomical entity^c
has sub-classes: blood^c, urine^c

organismal quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001995

has super-classes: physical object quality^c
has sub-classes: biological sex^c, maturity^c, obese^c, viability^c

organization^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000245

has super-classes: material entity^c
is in range of: is member of organization^op
has members: Applied Biosystemsⁿⁱ, Helicosⁿⁱ, Illuminaⁿⁱ, Li-Corⁿⁱ, Rocheⁿⁱ

organochalcogen compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_36962

has super-classes: heteroorganic entity^c; chalcogen molecular entity^c
has sub-classes: organooxygen compound^c, organosulfur compound^c

organonitrogen compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_35352

has super-classes: heteroorganic entity^c; nitrogen molecular entity^c
has sub-classes: N-glycosyl compound^c, carboxamide^c, cyanine dye^c, organonitrogen heterocyclic compound^c, peptide^c

organonitrogen heterocyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_38101

has super-classes: organic heterocyclic compound^c; organonitrogen compound^c
has sub-classes: azabicycloalkane^c, benzopyrrole^c, diazines^c

organooxygen compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_36963

has super-classes: oxygen molecular entity^c; organochalcogen compound^c
has sub-classes: carbohydrates and carbohydrate derivatives^c, carbon oxoacid^c, carbonyl compound^c, carboxamide^c, oxacycle^c

organosulfonic acid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33551

has super-classes: organosulfur compound^c; sulfur oxoacid derivative^c
has sub-classes: Alexa Fluor 532^c

organosulfur compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33261

has super-classes: sulfur molecular entity^c; organochalcogen compound^c
has sub-classes: organosulfonic acid^c, organosulfur heterocyclic compound^c

organosulfur heterocyclic compound^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_38106

has super-classes: organic heterocyclic compound^c; organosulfur compound^c
has sub-classes: thiabicycloalkane^c

orthochromatic erythroblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000552

is equivalent to: erythroblast^c and (has part^op some acidophilic cytoplasm^c) and (participates in^op some apoptotic chromosome condensation^c)
has super-classes: erythroblast^c; develops from^op some polychromatophilic erythroblast^c; participates in^op some apoptotic chromosome condensation^c; has part^op some acidophilic cytoplasm^c

osteoblast differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0001649

has super-classes: cell differentiation^c

osteoclast differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030316

has super-classes: myeloid leukocyte differentiation^c

outer epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0007376

has super-classes: surface structure^c; ecto-epithelium^c
has sub-classes: skin epidermis^c

oxacycle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_38104

has super-classes: organic heterocyclic compound^c; organooxygen compound^c
has sub-classes: oxolanes^c

oxide^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_25741

has super-classes: oxygen molecular entity^c; heteroatomic molecular entity^c
has sub-classes: oxoanion^c

oxoanion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_35406

has super-classes: oxide^c; polyatomic anion^c
has sub-classes: sulfur oxoanion^c

oxolanes^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_26912

has super-classes: organic heteromonocyclic compound^c; oxacycle^c
has sub-classes: 2'-deoxyribonucleoside^c, nucleoside^c

oxygen accumulating cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000329

is equivalent to: native cell^c and (capable of^op some oxygen transport^c)
has super-classes: native cell^c; capable of^op some oxygen transport^c
has sub-classes: erythrocyte^c

oxygen molecular entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_25806

has super-classes: chalcogen molecular entity^c
has sub-classes: hydroxides^c, organooxygen compound^c, oxide^c

oxygen transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0015671

has super-classes: single-organism transport^c

p-block molecular entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33675

has super-classes: main group molecular entity^c
has sub-classes: chalcogen molecular entity^c, nitrogen molecular entity^c, organic molecular entity^c

paired box protein PAX-5^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001903

has super-classes: protein^c

paired-end library^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000722

has super-classes: processed material^c

paired-end library preparation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001852

is equivalent to: library preparation^c and (has_specified_output^op some paired-end library^c)
has super-classes: library preparation^c

PANC-1 cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000122

has super-classes: immortal animal cell line cell^c

pancreas^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001264

has super-classes: pancreatic material^c; viscus^c

pancreas development^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0031016

has super-classes: single-organism developmental process^c; anatomical structure development^c

pancreas exocrine glandular cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_1001599

is equivalent to: glandular epithelial cell^c and (part of^op some exocrine pancreas^c)
has super-classes: glandular epithelial cell^c; epithelial cell of exocrine pancreas^c; part of^op some exocrine pancreas^c; part of^op some exocrine pancreas epithelium^c
has sub-classes: pancreatic acinar cell^c

pancreas transcription factor 1 subunit alpha^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000013418

has super-classes: protein^c

pancreas/duodenum homeobox protein 1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000012523

has super-classes: protein^c

pancreatic A cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000171

is equivalent to: type A enterocrine cell^c and (part of^op some pancreas^c)
has super-classes: epithelial cell of pancreas^c; type A enterocrine cell^c; pancreatic endocrine cell^c; part of^op some islet of Langerhans^c; part of^op some pancreas^c; develops from^op some progenitor cell of endocrine pancreas^c; capable of^op some glucagon secretion^c

pancreatic acinar cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002064

is equivalent to: acinar cell^c and (part of^op some pancreatic acinus^c)
has super-classes: acinar cell^c; pancreas exocrine glandular cell^c; has part^op some zymogen granule membrane^c; part of^op some pancreatic acinus^c

pancreatic acinus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001263

has super-classes: endoderm-derived structure^c; glandular acinus^c

pancreatic cell^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002966

is equivalent to: cell^c and (part of^op some pancreas^c)
has super-classes: pancreatic material^c; cell^c
has sub-classes: Insm1-expressing endocrine progenitor cell^c, epithelial cell of pancreas^c, neurogenin-3-expressing endocrine progenitor cell^c, neurogenin-3-lacking pancreatic progenitor cell^c, pancreatic endocrine cell^c

pancreatic D cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000173

is equivalent to: type D enteroendocrine cell^c and (part of^op some pancreas^c)
has super-classes: epithelial cell of pancreas^c; type D enteroendocrine cell^c; pancreatic endocrine cell^c; develops from^op some progenitor cell of endocrine pancreas^c; part of^op some pancreas^c; part of^op some islet of Langerhans^c

pancreatic duct^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0007329

has super-classes: digestive system duct^c; endoderm-derived structure^c
has sub-classes: ventral pancreatic duct^c

pancreatic ductal adenocarcinoma cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BTO_0003081

has super-classes: cancer cell^c

pancreatic ductal cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002079

is equivalent to: epithelial cell of pancreas^c and (part of^op some ventral pancreatic duct^c) and (capable of^op some bicarbonate transmembrane transporter activity^c)
has super-classes: cholangiocyte^c; epithelial cell of exocrine pancreas^c; capable of^op some bicarbonate transmembrane transporter activity^c; part of^op some ventral pancreatic duct^c
has sub-classes: large pancreatic ductal cell^c, small pancreatic ductal cell'^c

pancreatic endocrine cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0008024

is equivalent to: endocrine cell^c and (part of^op some pancreas^c)
has super-classes: endocrine cell^c; pancreatic cell^c; part of^op some pancreas^c
has sub-classes: pancreatic A cell^c, pancreatic D cell^c, pancreatic PP cell^c, type B pancreatic cell^c

pancreatic epithelial bud^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003922

has super-classes: embryonic tissue^c; endo-epithelium^c; epithelial sac^c
has sub-classes: ventral pancreatic bud^c

pancreatic epsilon cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0005019

In mammals the endocrine pancreas is called the Islets of Langerhans.

has super-classes: ghrelin secreting cell^c

pancreatic material^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000071

is equivalent to: pancreas^c or (part of^op some pancreas^c) or (derives from^op some pancreas^c or (part of^op some pancreas^c)) or (has potential to develop into^op some pancreas^c)
has super-classes: material entity^c
has sub-classes: pancreas^c, pancreatic cell^c

pancreatic PP cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002275

The term PP cell of pancreatic acinus was obsoleted due to a lack of evidence, making PP cell of pancreatic islets synonymous with pancreatic PP cell.

is equivalent to: PP cell^c and (part of^op some islet of Langerhans^c) and (part of^op some pancreas^c)
has super-classes: epithelial cell of pancreas^c; PP cell^c; pancreatic endocrine cell^c; part of^op some islet of Langerhans^c; part of^op some pancreas^c

paraffin specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000950

is equivalent to: (is_specified_output_of^op some paraffin storage^c and (has_specified_input^op some has role^op some specimen role^c)) and (has role^op some specimen role^c)
has super-classes: specimen with known storage state^c

paraffin storage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000977

need to specify paraffin or wax is one of specified input of the process

has super-classes: storage^c; achieves_planned_objective^op some material maintenance objective^c; has_specified_input^op some gross anatomical part^c or organism^c

parallel group design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500006

has super-classes: study design^c

parasympathetic ganglion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001808

has super-classes: autonomic ganglion^c; neural crest-derived structure^c
has sub-classes: ciliary ganglion^c

parathyroid gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001132

has super-classes: endocrine gland^c

paravertebral ganglion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001807

has super-classes: ganglion^c; sympathetic ganglion^c
has sub-classes: superior cervical ganglion^c

parietal lobe^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001872

has super-classes: lobe of cerebral hemisphere^c

parotid gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001831

has super-classes: saliva-secreting gland^c; major salivary gland^c; exocrine gland^c; endoderm-derived structure^c; structure with developmental contribution from neural crest^c

participant under investigation role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000097

has super-classes: role^c; realized in^op only study design execution^c
has sub-classes: reference subject role^c

pathogenicity design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001454

has super-classes: study design^c; has part^op some biological feature identification objective^c

pathologic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_1110122

has super-classes: biological_process^c
has sub-classes: infection^c

Patterns from Gene Expression software^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBCS_0000165

has super-classes: differential expression software^c

Pax4{(HA.LCA)Ggu} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004146

has super-classes: mouse strain^c

Pax4{HA.LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004123

has super-classes: stem cell derived cell line^c

pck{tm1.1Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000194

has super-classes: mouse strain^c

PCR instrument^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000989

has super-classes: thermal cycler^c; has function^op some realized in^op only polymerase chain reaction^c

PCR product^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000406

is equivalent to: double-stranded DNA^c and (is_specified_output_of^op some polymerase chain reaction^c)
has super-classes: double-stranded DNA^c; amplified DNA^c

Pdx1-expressing foregut endodermal cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000048

has super-classes: epithelial cell^c; endodermal cell^c; has part^op some pancreas/duodenum homeobox protein 1^c; part of^op some endoderm of foregut^c

Pdx1{(AIVd)Rwst} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004077

has super-classes: mouse strain^c

Pdx1{(CFP)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000017

has super-classes: mouse strain^c

Pdx1{(Cre-ER)} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004088

has super-classes: mouse strain^c

Pdx1{(H2B.Apple)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004058

has super-classes: mouse strain^c

Pdx1{AIVd} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004076

has super-classes: stem cell derived cell line^c

Pdx1{CFP} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001181

has super-classes: stem cell derived cell line^c

Pdx1{Cre.ER} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004144

has super-classes: stem cell derived cell line^c

Pdx1{CreMgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004533

has super-classes: mouse strain^c

Pdx1{Cre} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004158

has super-classes: stem cell derived cell line^c

Pdx1{H2B.Neptune} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004539

has super-classes: stem cell derived cell line^c

Pdx1{LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002241

has super-classes: stem cell derived cell line^c

Pdx1{rTTA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004157

has super-classes: stem cell derived cell line^c

Pdx1{tm3Cvw} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000247

has super-classes: mouse strain^c

Pdx1{tm4Cvw} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000243

has super-classes: mouse strain^c

Pdx1{tm5Cvw} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000245

has super-classes: mouse strain^c

Pdx1{tm6Cvw} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000242

has super-classes: mouse strain^c

peak calling^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBCS_0000167

has super-classes: data transformation^c

peptide^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_16670

has super-classes: organonitrogen compound^c; carboxamide^c
has sub-classes: protein^c

peptide hormone secreting cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000167

is equivalent to: secretory cell^c and (capable of^op some peptide hormone secretion^c)
has super-classes: secretory cell^c; capable of^op some peptide hormone secretion^c
has sub-classes: PP cell^c, ghrelin secreting cell^c, glucagon secreting cell^c, insulin secreting cell^c, somatostatin secreting cell^c

peptide hormone secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030072

has super-classes: peptide secretion^c; hormone secretion^c
has sub-classes: ghrelin secretion^c, glucagon secretion^c, insulin secretion^c, somatostatin secretion^c

peptide secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002790

has super-classes: peptide transport^c; secretion^c
has sub-classes: peptide hormone secretion^c

peptide transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0015833

has super-classes: amide transport^c; organic substance transport^c
has sub-classes: peptide secretion^c

percent^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000187

has super-classes: dimensionless unit^c
has sub-classes: mass percentage^c, mass volume percentage^c, volume percentage^c

pericardium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002407

has super-classes: cavity lining^c; squamous epithelium^c

peritoneum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002358

has super-classes: serous membrane^c

perturb function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000377

has super-classes: function^c

perturbation device^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001033

is equivalent to: has function^op some perturb function^c
has super-classes: device^c
has sub-classes: homogenizer^c, sonicator^c, vortexer^c

pH^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000196

has super-classes: concentration unit^c; dimensionless unit^c

phage display library^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_1000029

has super-classes: recombinant vector^c; is_specified_output_of^op some recombinant vector cloning^c; has grain^op some recombinant vector^c

pharyngeal arch artery^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004363

has super-classes: mixed endoderm/mesoderm-derived structure^c; blood vessel^c; embryonic structure^c; respiratory system artery^c; structure with developmental contribution from neural crest^c; upper respiratory conduit^c

phenotype^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OGMS_0000023

has super-classes: quality^c

phenotypic sex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001894

has super-classes: biological sex^c
has sub-classes: female^c, hermaphrodite^c, male^c

phosphorus atom^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_28659

has super-classes: atom^c; main group element atom^c
has sub-classes: phosphorus-32 atom^c, phosphorus-33 atom^c

phosphorus-32 atom^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_37972

has super-classes: phosphorus atom^c

phosphorus-33 atom^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_37973

has super-classes: phosphorus atom^c

photodetector^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400082

has super-classes: measurement device^c; has function^op some measure function^c

physical object quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001241

Relational qualities are qualities that hold between multiple entities. Normal (monadic) qualities such as the shape of a eyeball exist purely as a quality of that eyeball. A relational quality such as sensitivity to light is a quality of that eyeball (and connecting nervous system) as it relates to incoming light waves/particles.

has super-classes: quality^c
has sub-classes: cellular quality^c, increased object quality^c, molecular quality^c, morphology^c, organismal quality^c, physical quality^c, population quality^c

physical quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001018

has super-classes: physical object quality^c
has sub-classes: temperature^c, time^c

picogram^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000025

has super-classes: mass unit^c

picoliter^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000103

has super-classes: volume unit^c

picomolar^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000066

has super-classes: unit of molarity^c

picomole^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000042

has super-classes: substance unit^c

pigment cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000147

has super-classes: stuff accumulating cell^c
has sub-classes: melanocyte^c

pituitary gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000007

has super-classes: endocrine gland^c; gland of diencephalon^c; structure with developmental contribution from neural crest^c

placenta^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001987

has super-classes: organ^c; extraembryonic structure^c; reproductive structure^c

plan specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000104

2/3/2009 Comment from OBI review. Action specification not well enough specified. Conditional specification not well enough specified. Question whether all plan specifications have objective specifications. Request that IAO either clarify these or change definitions not to use them

has super-classes: directive information entity^c; has part^op some objective specification^c; has part^op some action specification^c
has sub-classes: algorithm^c, protocol^c, software^c, study design^c
is in range of: executes^op

planned process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000011

is equivalent to: realizes^op some concretizes^op some plan specification^c
has super-classes: process^c
has sub-classes: animal feeding^c, assay^c, compound based treatment^c, data transformation^c, documenting^c, drawing a conclusion based on data^c, exposure of material to environment^c, image creation^c, investigation^c, islet expansion in vitro^c, material maintenance^c, material processing^c, specimen collection process^c, study design execution^c, study intervention^c, surgery^c, treatment^c
is in domain of: achieves_planned_objective^op, executes^op, has_specified_input^op, has_specified_output^op
is in range of: is_specified_output_of^op, objective_achieved_by^op

planning^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000339

has super-classes: process^c; process^c and (has participant^op some plan specification^c)

plasma membrane part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044459

has super-classes: membrane part^c; cell part^c
has sub-classes: B cell receptor complex^c, MHC protein complex^c, T cell receptor complex^c

plasmid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000430

is equivalent to: double-stranded DNA^c and (has function^op some realized in^op only gene expression^c) and (has quality^op some circular^c)
has super-classes: double-stranded DNA^c

platelet^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000233

Platelets are reportedly CCR1-positive, CCR2-negative, CCR3-positive, CCR4-positive, CCR5-negative, CCR6-negative, CCR7-negative, CCR8-negative, CCR9-negative, CCR10-negative, CD16-positive, CD23-positive, CD32-positive, CD40-positive, CD41-positive CD42-positive, CD61-positive, CD62P-positive, CD64-positive, CD89-positive, CD102-positive, CD147-positive (activated platelets), CD154-positive (activated platelets), CD162-positive, CD209, CD282-positive, CD284-positive, CD289-positive, CD181-negative, CD182-negative, CD183-negative, CD184-positive, CLEC2-positive, GPVI-positive, JAMC-positive, PAR1-positive, PAR2-negative, PAR3-positive, PAR4-positive, TSP1-positive, and TXA2R-positive. Platelets can reportedly produce CCL2, CCL3, CCL5, CCL7, CCL17, CD40L, CXCL1, CXCL4, CXCL4L1, CXCL5, CXCL7, CXCL8, CXCL12, EGF, factor V, factor VII, factor XI, factor XIII, bFGF, histamine, IGF-1, IL-1beta, PAI-1, PDGF, plasminogen, protein S, serotonin, TGF-beta, TFPI, VEGF, and vWF.

is equivalent to: myeloid cell^c and (bearer of^op some anucleate^c) and (bearer of^op some discoid^c) and (capable of^op some blood coagulation^c) and (capable of^op some blood circulation^c)
has super-classes: blood cell^c; anucleate cell^c; serotonin secreting cell^c; myeloid cell^c; bearer of^op some discoid^c; capable of^op some blood coagulation^c; bearer of^op some anucleate^c; develops from^op some megakaryocyte^c; capable of^op some blood circulation^c

ploidy^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001374

has super-classes: cellular quality^c
has sub-classes: aneuploid^c, euploid^c

poly(A)-site sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002045

has super-classes: RNA-seq assay^c

polyA RNA extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000869

has super-classes: RNA extract^c; is_specified_output_of^op some polyA RNA extraction^c

polyA RNA extraction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000848

has super-classes: RNA extraction^c

polyatomic anion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33273

has super-classes: ion^c; polyatomic ion^c
has sub-classes: oxoanion^c

polyatomic entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_36357

has super-classes: molecular entity^c
has sub-classes: biomacromolecule^c, heteroatomic molecular entity^c, molecule^c, polyatomic ion^c

polyatomic ion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_36358

has super-classes: ion^c; polyatomic entity^c
has sub-classes: polyatomic anion^c

polychromatophilic cytoplasm^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CP_0000035

has super-classes: cytoplasm^c

polychromatophilic erythroblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000550

is equivalent to: erythroblast^c and (has part^op some polychromatophilic cytoplasm^c) and (has part^op some heterochromatin^c) and (has plasma membrane part^op some transferrin receptor protein 1^c)
has super-classes: erythroblast^c; has part^op some heterochromatin^c; develops from^op some basophilic erythroblast^c; has plasma membrane part^op some transferrin receptor protein 1^c; has part^op some polychromatophilic cytoplasm^c

Polyclonal aequorea victoria Green Fluorescent Protein raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000287

has super-classes: polyclonal antibody^c

polyclonal antibody^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/REO_0000502

has super-classes: antibody reagent^c
has sub-classes: Polyclonal aequorea victoria Green Fluorescent Protein raised in rabbit^c, Polyclonal bovine Carboxypeptidase A raised in rabbit^c, Polyclonal cow GFAP raised in rabbit^c, Polyclonal cow Insulin raised in guinea pig^c, Polyclonal e. coli beta Galactosidase raised in chicken^c, Polyclonal enterobacteria phage p1 Cre raised in guinea pig^c, Polyclonal human CD-200 raised in goat^c, Polyclonal human CD-200 raised in goat^c, Polyclonal human CDCP1 raised in goat^c, Polyclonal human CDCP1 raised in goat^c, Polyclonal human Chromogranin A raised in rabbit^c, Polyclonal human Cleaved Notch1 raised in rabbit^c, Polyclonal human Coagulation factor 3(rhF3) raised in goat^c, Polyclonal human DDR1 raised in goat^c, Polyclonal human GATA-4 raised in rabbit^c, Polyclonal human Glucagon (GCG) raised in guinea pig^c, Polyclonal human Glucagon (GCG) raised in rabbit^c, Polyclonal human Glucagon raised in rabbit^c, Polyclonal human HIP-14 ZDHHC17 raised in rabbit^c, Polyclonal human HNF-1β raised in goat^c, Polyclonal human HNF6 raised in rabbit^c, Polyclonal human Insulin raised in goat^c, Polyclonal human Insulin raised in guinea pig^c, Polyclonal human Jagged1 raised in goat^c, Polyclonal human Ki67 raised in rabbit^c, Polyclonal human Lrp11 raised in rabbit^c, Polyclonal human MafA raised in rabbit^c, Polyclonal human MafB raised in rabbit^c, Polyclonal human Muc1 raised in rabbit^c, Polyclonal human Ngn3 raised in sheep^c, Polyclonal human Nkx2.2 raised in goat^c, Polyclonal human Pancreatic Polypeptide (PPY) raised in rabbit^c, Polyclonal human Somatostatin (Sst) raised in goat^c, Polyclonal human Somatostatin (Sst) raised in sheep^c, Polyclonal human Sox17 raised in goat^c, Polyclonal human Sox17 raised in rabbit^c, Polyclonal human Sox17 raised in rabbit^c, Polyclonal human Sox2 raised in rabbit^c, Polyclonal human Sox9 raised in rabbit^c, Polyclonal human T (Brachyury) raised in goat^c, Polyclonal human TSPAN7 raised in rabbit^c, Polyclonal human amylase raised in rabbit^c, Polyclonal human b-catenin raised in goat^c, Polyclonal human c-myc raised in rabbit^c, Polyclonal human ghrelin raised in goat^c, Polyclonal human ghrelin raised in rabbit^c, Polyclonal human ghrelin raised in rabbit^c, Polyclonal human α-Amylase (AMY2A) raised in rabbit^c, Polyclonal mouse Arx raised in rabbit^c, Polyclonal mouse C-peptide 1 raised in rabbit^c, Polyclonal mouse Carboxypeptidase A1 (CPA1) raised in goat^c, Polyclonal mouse DNER raised in goat^c, Polyclonal mouse FoxA2 raised in goat^c, Polyclonal mouse Foxa2 (HNF3b) raised in goat^c, Polyclonal mouse Gpr39-1a raised in rabbit^c, Polyclonal mouse IA1 (Insm-1) raised in rabbit^c, Polyclonal mouse Irx2 raised in rabbit^c, Polyclonal mouse Laminin raised in rabbit^c, Polyclonal mouse Lrp11 raised in rabbit^c, Polyclonal mouse Ngn3 raised in chicken^c, Polyclonal mouse Ngn3 raised in chicken^c, Polyclonal mouse Ngn3 raised in goat^c, Polyclonal mouse Ngn3 raised in rabbit^c, Polyclonal mouse Ngn3 raised in rabbit^c, Polyclonal mouse Nkx6.1 raised in chicken^c, Polyclonal mouse Nkx6.1 raised in chicken^c, Polyclonal mouse Onecut1 raised in guinea pig^c, Polyclonal mouse PDX1 raised in chicken^c, Polyclonal mouse PDX1 raised in chicken^c, Polyclonal mouse PDX1 raised in chicken^c, Polyclonal mouse PDX1 raised in goat^c, Polyclonal mouse PDX1 raised in guinea pig^c, Polyclonal mouse PDX1 raised in rabbit^c, Polyclonal mouse Pax4 raised in guinea pig^c, Polyclonal mouse Pax6 raised in rabbit^c, Polyclonal mouse Prox1 raised in chicken^c, Polyclonal mouse Prox1 raised in chicken^c, Polyclonal mouse Ptf1a raised in rabbit^c, Polyclonal mouse Sez6l2 raised in rabbit^c, Polyclonal mouse Sez6l2 raised in rabbit^c, Polyclonal mouse Sez6l2 raised in rabbit^c, Polyclonal mouse Shh raised in goat^c, Polyclonal mouse mArx raised in guinea pig^c, Polyclonal pig Insulin raised in guinea pig^c, Polyclonal rat C-peptide 1 raised in rabbit^c, Polyclonal rat C-peptide 2 raised in rabbit^c, Polyclonal rat CART raised in rabbit^c, Polyclonal rat CART raised in rabbit^c, Polyclonal rat Glut-2 raised in rabbit^c, Polyclonal rat IAPP raised in rabbit^c, Polyclonal rat Nkx6.1 raised in rabbit^c, Polyclonal rat PDX1 raised in rabbit^c, Polyclonal rat PDX1 raised in rabbit^c, Polyclonal rat Synaptophysin (SYP) raised in rabbit^c, Polyclonal rat VEGFA raised in goat^c, Polyclonal rat ghrelin raised in rabbit^c

Polyclonal bovine Carboxypeptidase A raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000282

has super-classes: polyclonal antibody^c

Polyclonal cow GFAP raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004306

has super-classes: polyclonal antibody^c

Polyclonal cow Insulin raised in guinea pig^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004324

has super-classes: polyclonal antibody^c

Polyclonal e. coli beta Galactosidase raised in chicken^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000333

has super-classes: polyclonal antibody^c

Polyclonal enterobacteria phage p1 Cre raised in guinea pig^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004113

has super-classes: polyclonal antibody^c

Polyclonal human amylase raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000279

has super-classes: polyclonal antibody^c

Polyclonal human b-catenin raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000277

has super-classes: polyclonal antibody^c

Polyclonal human c-myc raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000280

has super-classes: polyclonal antibody^c

Polyclonal human CD-200 raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004126

has super-classes: polyclonal antibody^c

Polyclonal human CD-200 raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004135

has super-classes: polyclonal antibody^c

Polyclonal human CDCP1 raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004125

has super-classes: polyclonal antibody^c

Polyclonal human CDCP1 raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004322

has super-classes: polyclonal antibody^c

Polyclonal human Chromogranin A raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000283

has super-classes: polyclonal antibody^c

Polyclonal human Cleaved Notch1 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001163

has super-classes: polyclonal antibody^c

Polyclonal human Coagulation factor 3(rhF3) raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004127

has super-classes: polyclonal antibody^c

Polyclonal human DDR1 raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000969

has super-classes: polyclonal antibody^c

Polyclonal human GATA-4 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000291

has super-classes: polyclonal antibody^c

Polyclonal human ghrelin raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000275

has super-classes: polyclonal antibody^c

Polyclonal human ghrelin raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000314

has super-classes: polyclonal antibody^c

Polyclonal human ghrelin raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000315

has super-classes: polyclonal antibody^c

Polyclonal human Glucagon (GCG) raised in guinea pig^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004308

has super-classes: polyclonal antibody^c

Polyclonal human Glucagon (GCG) raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004307

has super-classes: polyclonal antibody^c

Polyclonal human Glucagon raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004327

has super-classes: polyclonal antibody^c

Polyclonal human HIP-14 ZDHHC17 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004256

has super-classes: polyclonal antibody^c

Polyclonal human HNF-1β raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004320

has super-classes: polyclonal antibody^c

Polyclonal human HNF6 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000311

has super-classes: polyclonal antibody^c

Polyclonal human Insulin raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004326

has super-classes: polyclonal antibody^c

Polyclonal human Insulin raised in guinea pig^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004325

has super-classes: polyclonal antibody^c

Polyclonal human Jagged1 raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001164

has super-classes: polyclonal antibody^c

Polyclonal human Ki67 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004310

has super-classes: polyclonal antibody^c

Polyclonal human Lrp11 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004048

has super-classes: polyclonal antibody^c

Polyclonal human MafA raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004311

has super-classes: polyclonal antibody^c

Polyclonal human MafB raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004312

has super-classes: polyclonal antibody^c

Polyclonal human Muc1 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001162

has super-classes: polyclonal antibody^c

Polyclonal human Ngn3 raised in sheep^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004129

has super-classes: polyclonal antibody^c

Polyclonal human Nkx2.2 raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000274

has super-classes: polyclonal antibody^c

Polyclonal human Pancreatic Polypeptide (PPY) raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004313

has super-classes: polyclonal antibody^c

Polyclonal human Somatostatin (Sst) raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004328

has super-classes: polyclonal antibody^c

Polyclonal human Somatostatin (Sst) raised in sheep^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004315

has super-classes: polyclonal antibody^c

Polyclonal human Sox17 raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000331

has super-classes: polyclonal antibody^c

Polyclonal human Sox17 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000324

has super-classes: polyclonal antibody^c

Polyclonal human Sox17 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000325

has super-classes: polyclonal antibody^c

Polyclonal human Sox2 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000321

has super-classes: polyclonal antibody^c

Polyclonal human Sox9 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004321

has super-classes: polyclonal antibody^c

Polyclonal human T (Brachyury) raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000346

has super-classes: polyclonal antibody^c

Polyclonal human TSPAN7 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004040

has super-classes: polyclonal antibody^c

Polyclonal human α-Amylase (AMY2A) raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004323

has super-classes: polyclonal antibody^c

Polyclonal mouse Arx raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9003023

has super-classes: polyclonal antibody^c

Polyclonal mouse C-peptide 1 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000269

has super-classes: polyclonal antibody^c

Polyclonal mouse Carboxypeptidase A1 (CPA1) raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001161

has super-classes: polyclonal antibody^c

Polyclonal mouse DNER raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002201

has super-classes: polyclonal antibody^c

Polyclonal mouse Foxa2 (HNF3b) raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004318

has super-classes: polyclonal antibody^c

Polyclonal mouse FoxA2 raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000322

has super-classes: polyclonal antibody^c

Polyclonal mouse Gpr39-1a raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000971

has super-classes: polyclonal antibody^c

Polyclonal mouse IA1 (Insm-1) raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000336

has super-classes: polyclonal antibody^c

Polyclonal mouse Irx2 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9003022

has super-classes: polyclonal antibody^c

Polyclonal mouse Laminin raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000347

has super-classes: polyclonal antibody^c

Polyclonal mouse Lrp11 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000966

has super-classes: polyclonal antibody^c

Polyclonal mouse mArx raised in guinea pig^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9003102

has super-classes: polyclonal antibody^c

Polyclonal mouse Ngn3 raised in chicken^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004548

has super-classes: polyclonal antibody^c

Polyclonal mouse Ngn3 raised in chicken^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004549

has super-classes: polyclonal antibody^c

Polyclonal mouse Ngn3 raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002482

has super-classes: polyclonal antibody^c

Polyclonal mouse Ngn3 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000302

has super-classes: polyclonal antibody^c

Polyclonal mouse Ngn3 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000303

has super-classes: polyclonal antibody^c

Polyclonal mouse Nkx6.1 raised in chicken^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004550

has super-classes: polyclonal antibody^c

Polyclonal mouse Nkx6.1 raised in chicken^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004551

has super-classes: polyclonal antibody^c

Polyclonal mouse Onecut1 raised in guinea pig^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004052

has super-classes: polyclonal antibody^c

Polyclonal mouse Pax4 raised in guinea pig^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002263

has super-classes: polyclonal antibody^c

Polyclonal mouse Pax6 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000276

has super-classes: polyclonal antibody^c

Polyclonal mouse PDX1 raised in chicken^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000294

has super-classes: polyclonal antibody^c

Polyclonal mouse PDX1 raised in chicken^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004552

has super-classes: polyclonal antibody^c

Polyclonal mouse PDX1 raised in chicken^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004553

has super-classes: polyclonal antibody^c

Polyclonal mouse PDX1 raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000312

has super-classes: polyclonal antibody^c

Polyclonal mouse PDX1 raised in guinea pig^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000313

has super-classes: polyclonal antibody^c

Polyclonal mouse PDX1 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000292

has super-classes: polyclonal antibody^c

Polyclonal mouse Prox1 raised in chicken^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004554

has super-classes: polyclonal antibody^c

Polyclonal mouse Prox1 raised in chicken^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004555

has super-classes: polyclonal antibody^c

Polyclonal mouse Ptf1a raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000335

has super-classes: polyclonal antibody^c

Polyclonal mouse Sez6l2 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000967

has super-classes: polyclonal antibody^c

Polyclonal mouse Sez6l2 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000968

has super-classes: polyclonal antibody^c

Polyclonal mouse Sez6l2 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004047

has super-classes: polyclonal antibody^c

Polyclonal mouse Shh raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000332

has super-classes: polyclonal antibody^c

Polyclonal pig Insulin raised in guinea pig^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004309

has super-classes: polyclonal antibody^c

Polyclonal rat C-peptide 1 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000268

has super-classes: polyclonal antibody^c

Polyclonal rat C-peptide 2 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000267

has super-classes: polyclonal antibody^c

Polyclonal rat CART raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000861

has super-classes: polyclonal antibody^c

Polyclonal rat CART raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000972

has super-classes: polyclonal antibody^c

Polyclonal rat ghrelin raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000289

has super-classes: polyclonal antibody^c

Polyclonal rat Glut-2 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000281

has super-classes: polyclonal antibody^c

Polyclonal rat IAPP raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000266

has super-classes: polyclonal antibody^c

Polyclonal rat Nkx6.1 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000273

has super-classes: polyclonal antibody^c

Polyclonal rat PDX1 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000271

has super-classes: polyclonal antibody^c

Polyclonal rat PDX1 raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000272

has super-classes: polyclonal antibody^c

Polyclonal rat Synaptophysin (SYP) raised in rabbit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004329

has super-classes: polyclonal antibody^c

Polyclonal rat VEGFA raised in goat^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004317

has super-classes: polyclonal antibody^c

polymer_attribute^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000443

has super-classes: molecular quality^c
has sub-classes: circular^c

polymerase chain reaction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000415

has super-classes: enzymatic amplification^c; achieves_planned_objective^op some material transformation objective^c; has_specified_input^op some deoxyribonucleic acid^c; has_specified_output^op some PCR product^c; realizes^op some synthesizing function^c and (inheres in^op some DNA polymerase complex^c)
has sub-classes: multiplex ligation-mediated amplification^c

polynucleotide^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_15986

has super-classes: biomacromolecule^c; nucleobase-containing molecular entity^c
has sub-classes: nucleic acid^c

polypeptide^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000104

has super-classes: biological_region^c

polyploid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001377

has super-classes: euploid^c

polyploid cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000412

has super-classes: native cell^c
has sub-classes: endopolyploid cell^c

polysaccharide^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_18154

has super-classes: biomacromolecule^c; carbohydrates and carbohydrate derivatives^c
has sub-classes: agarose^c

pons^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000988

has super-classes: regional part of brain^c; structure with developmental contribution from neural crest^c

pool of specimens^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302716

is equivalent to: specimen^c and (is_specified_output_of^op some material combination^c and (has_specified_input^op only specimen^c))
has super-classes: processed specimen^c

pooling specimens^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600016

has super-classes: material combination^c; has_specified_input^op min 2; has_specified_output^op some pool of specimens^c; has_specified_input^op some specimen^c; achieves_planned_objective^op some material combination objective^c

population^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000181

has super-classes: material entity^c
has sub-classes: ethnic group^c

population quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002003

has super-classes: physical object quality^c
has sub-classes: mixed sex^c

portioning objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000678

has super-classes: material separation objective^c

post mortem specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000902

is equivalent to: is_specified_output_of^op some specimen collection process^c and (has_specified_input^op some organism^c and (has quality^op some dead^c))
has super-classes: specimen with pre- or post-mortem status^c

post-embryonic stage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000092

has super-classes: life cycle stage^c

post-juvenile adult stage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000113

has super-classes: life cycle stage^c

post-transcriptional modification design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001358

post transcription modification design? or more clear RNAi design / antibody targeting design? need to check the use cases

has super-classes: intervention design^c; has part^op some study design independent variable^c and (is about^op some study intervention^c); has part^op some biological feature identification objective^c

PP cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000696

has super-classes: enteroendocrine cell^c; peptide hormone secreting cell^c
has sub-classes: pancreatic PP cell^c

Pparg{tm1.1Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000197

has super-classes: mouse strain^c

pre-mortem specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000873

is equivalent to: is_specified_output_of^op some specimen collection process^c and (has_specified_input^op some organism^c and (has quality^op some alive^c))
has super-classes: specimen with pre- or post-mortem status^c

preadipocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002334

has super-classes: fibroblast^c

precursor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0011115

Work is needed on GO 'cell differentiation' before it is clear whether the equivalent class definition 'native cell' that capable_of some 'cell differentiation' works. Also, may want to consider merging this with non-terminally differentiated cell.

is equivalent to: native cell^c and (capable of^op some cell differentiation^c)
has super-classes: native cell^c; capable of^op some cell differentiation^c
has sub-classes: CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor^c, CD7-negative lymphoid progenitor OR granulocyte monocyte progenitor^c, common lymphoid progenitor^c, common myeloid progenitor, CD34-positive^c, erythroblast^c, granulocyte monocyte progenitor cell^c, lymphoid lineage restricted progenitor cell^c, macrophage dendritic cell progenitor^c, megakaryocyte-erythroid progenitor cell^c, monocyte^c, myeloid lineage restricted progenitor cell^c, non-terminally differentiated cell^c, stem cell^c

prefrontal cortex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000451

has super-classes: regional part of brain^c; structure with developmental contribution from neural crest^c

premigratory neural crest cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0007004

has super-classes: native cell^c; part of^op some neural crest^c; develops from^op some neurectodermal cell^c

preoptic area^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001928

has super-classes: regional part of brain^c

preputial gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000359

has super-classes: sebaceous gland^c; sex gland^c
has sub-classes: male preputial gland^c

primary amide^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33256

has super-classes: nitrogen molecular entity^c
has sub-classes: biotins^c, carboxamide^c

primary circulatory organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0007100

has super-classes: compound organ^c
has sub-classes: heart^c

primary cultured cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000001

Covers cells actively being cultured or stored in a quiescent state for future use.

has super-classes: cultured cell^c

primary metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044238

has super-classes: metabolic process^c
has sub-classes: nucleobase-containing compound metabolic process^c, protein metabolic process^c

primary structure of DNA macromolecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000811

is equivalent to: is concretized as^op some inheres in^op some deoxyribonucleic acid^c
has super-classes: region^c

primary structure of RNA molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000845

is equivalent to: is concretized as^op some inheres in^op some ribonucleic acid^c
has super-classes: region^c

pro-B cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000826

Human pro-B cells are reportedly CD10-positive, CD22-positive, CD34-positive, CD38-positive, CD45-low, CD48-positive, CD79a-positive, CD127-positive, CD184-positive, RAG-positive, TdT-positive, Vpre-B-positive, pre-BCR-negative, IgD-negative, and IgM-negative. Transcription factors expressed: Pax5-positive, EBF-positive, E2A-negative, Ikaros-negative, and PU.1-negative.

is equivalent to: lymphoid lineage restricted progenitor cell^c and (has part^op some paired box protein PAX-5^c) and (has part^op some DNA nucleotidylexotransferase^c) and (participates in^op some immunoglobulin V(D)J recombination^c)
has super-classes: lymphoid lineage restricted progenitor cell^c; has part^op some DNA nucleotidylexotransferase^c; develops from^op some common lymphoid progenitor^c; participates in^op some immunoglobulin V(D)J recombination^c; has part^op some paired box protein PAX-5^c

pro-NK cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000825

Most markers only described for human pro NK cells.

is equivalent to: lymphoid lineage restricted progenitor cell^c and (has plasma membrane part^op some CD34 molecule^c) and (has plasma membrane part^op some receptor-type tyrosine-protein phosphatase C isoform CD45RA^c) and (has plasma membrane part^op some interleukin-2 receptor subunit beta^c) and (has plasma membrane part^op some neprilysin^c) and (lacks_plasma_membrane_part^op some KLRB1-like protein^c) and (lacks_plasma_membrane_part^op some mast/stem cell growth factor receptor^c)
has super-classes: lymphoid lineage restricted progenitor cell^c; develops from^op some common lymphoid progenitor^c; has plasma membrane part^op some CD34 molecule^c; lacks_plasma_membrane_part^op some mast/stem cell growth factor receptor^c; has plasma membrane part^op some receptor-type tyrosine-protein phosphatase C isoform CD45RA^c; has plasma membrane part^op some neprilysin^c; lacks_plasma_membrane_part^op some KLRB1-like protein^c; has plasma membrane part^op some interleukin-2 receptor subunit beta^c

pro-T cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000827

is equivalent to: lymphoid lineage restricted progenitor cell^c and (capable of^op some T cell differentiation^c)
has super-classes: lymphoid lineage restricted progenitor cell^c; develops from^op some common lymphoid progenitor^c; capable of^op some T cell differentiation^c

process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000015

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: occurrent^c
has sub-classes: biological_process^c, history^c, planned process^c, planning^c, process profile^c
is in domain of: has duration^op, realizes^op
is in range of: is duration of^op, realized in^op
is disjoint with: temporal region^c, spatiotemporal region^c, process boundary^c

process boundary^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000035

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: occurrent^c
is disjoint with: temporal region^c, spatiotemporal region^c, process^c

process profile^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000144

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: process^c
is disjoint with: history^c

processed material^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000047

is equivalent to: material entity^c and (is_specified_output_of^op some material processing^c)
has super-classes: material entity^c
has sub-classes: amplified DNA^c, assay bead^c, cell freezing medium^c, cell lysate^c, cloning vector^c, culture medium^c, cultured cell population^c, device^c, extract^c, genetically modified material^c, molecular-labeled material^c, organ section^c, paired-end library^c, processed specimen^c, recombinant vector^c, single fragment library^c

processed specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000953

A tissue sample that has been sliced and stained for a histology study.

is equivalent to: processed material^c and specimen^c
has super-classes: processed material^c; specimen^c
has sub-classes: labeled specimen^c, nucleic acid extract^c, pool of specimens^c

proerythroblast^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000547

is equivalent to: erythroid lineage cell^c and (has part^op some basophilic cytoplasm^c) and (has part^op some increased nucleus size^c) and (has part^op some nucleus^c) and (has part^op some nucleolus^c) and (has plasma membrane part^op some transferrin receptor protein 1^c) and (lacks_plasma_membrane_part^op some CD19 molecule^c) and (lacks_plasma_membrane_part^op some CD4 molecule^c) and (lacks_plasma_membrane_part^op some integrin alpha-M^c) and (lacks_plasma_membrane_part^op some CD3 epsilon^c) and (lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c) and (lacks_plasma_membrane_part^op some CD2 molecule^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c) and (lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c) and (lacks_plasma_membrane_part^op some CD14 molecule^c) and (lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c)
has super-classes: erythroid lineage cell^c; nucleate cell^c; lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c; has plasma membrane part^op some transferrin receptor protein 1^c; develops from^op some erythroid progenitor cell^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c; has part^op some nucleolus^c; lacks_plasma_membrane_part^op some integrin alpha-M^c; lacks_plasma_membrane_part^op some CD19 molecule^c; lacks_plasma_membrane_part^op some CD3 epsilon^c; lacks_plasma_membrane_part^op some CD2 molecule^c; has part^op some basophilic cytoplasm^c; lacks_plasma_membrane_part^op some CD14 molecule^c; has part^op some increased nucleus size^c; lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c; lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c; has part^op some nucleus^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c; lacks_plasma_membrane_part^op some CD4 molecule^c

progenitor cell of endocrine pancreas^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002351

has super-classes: multi fate stem cell^c; has part^op some insulin gene enhancer protein ISL-1^c; has part^op some neurogenin-3^c

prominin-1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001786

has super-classes: protein^c

promonocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000559

Morphology: Mononuclear cell, diameter 14-18 _M, fine azurophilic granules; markers: CD11b (shared with many other myeloid cells); location: Adult: bone marrow; Fetal: Liver, Yolk Sac; role or process: hematopoiesis, monocyte development; lineage: hematopoietic, myeloid.

is equivalent to: monopoietic cell^c and (has part^op some azurophil granule^c) and (has plasma membrane part^op some integrin alpha-M^c) and (capable of^op some monocyte differentiation^c)
has super-classes: myeloid cell^c; monopoietic cell^c; has part^op some azurophil granule^c; capable of^op some monocyte differentiation^c; develops from^op some monoblast^c; has plasma membrane part^op some integrin alpha-M^c

promyelocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000836

is equivalent to: myeloid lineage restricted progenitor cell^c and (has part^op some basophilic cytoplasm^c) and (has part^op some increased nucleus size^c) and (has part^op some nucleolus^c) and (has part^op some azurophil granule^c) and (has plasma membrane part^op some alpha-(1,3)-fucosyltransferase FUT4^c) and (has plasma membrane part^op some CD33 molecule^c) and (lacks_plasma_membrane_part^op some integrin alpha-M^c) and (lacks_plasma_membrane_part^op some low affinity immunoglobulin gamma Fc region receptor III^c) and (lacks_plasma_membrane_part^op some signal transducer CD24^c)
has super-classes: myeloid cell^c; granulocytopoietic cell^c; nucleate cell^c; has part^op some basophilic cytoplasm^c; has part^op some azurophil granule^c; lacks_plasma_membrane_part^op some low affinity immunoglobulin gamma Fc region receptor III^c; has plasma membrane part^op some CD33 molecule^c; has part^op some nucleolus^c; has plasma membrane part^op some alpha-(1,3)-fucosyltransferase FUT4^c; develops from^op some myeloblast^c; lacks_plasma_membrane_part^op some signal transducer CD24^c; lacks_plasma_membrane_part^op some integrin alpha-M^c; has part^op some increased nucleus size^c

prostate gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002367

has super-classes: male accessory sex gland^c

protease cleavage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600056

has super-classes: enzymatic cleavage^c; has_specified_output^op some peptide^c; has_specified_input^op some protein^c and (located in^op some material entity^c)

protein^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000000001

has super-classes: peptide^c
has sub-classes: 5'-nucleotidase^c, ADP-ribosyl cyclase 1^c, CCAAT/enhancer-binding protein alpha^c, CD14 molecule^c, CD19 molecule^c, CD2 molecule^c, CD3 epsilon^c, CD33 molecule^c, CD34 molecule^c, CD4 molecule^c, CD44 molecule^c, CD59-like glycoprotein^c, CD69 molecule^c, CD7 molecule^c, CD9 molecule^c, DNA ligase^c, DNA nucleotidylexotransferase^c, KLRB1-like protein^c, T-cell acute lymphocytic leukemia protein 1^c, T-cell surface glycoprotein CD5^c, T-cell surface glycoprotein CD8 alpha chain^c, Thy-1 membrane glycoprotein^c, alpha-(1,3)-fucosyltransferase FUT4^c, cadherin-5^c, carcinoembryonic antigen-related cell adhesion molecule 8^c, chemokine receptor CCR1/3/1L^c, ectonucleotide pyrophosphatase/phosphodiesterase family member 3^c, endoglin^c, endothelial transcription factor GATA-2^c, epithelial cell adhesion molecule^c, erythroid transcription factor^c, glucagon^c, hepatocyte nuclear factor 1-alpha^c, hepatocyte nuclear factor 3-alpha^c, hepatocyte nuclear factor 3-beta^c, hepatocyte nuclear factor 4-alpha^c, hepatocyte nuclear factor 6^c, homeobox protein Nkx-2.2^c, homeobox protein Nkx-6.1^c, immunoglobulin gamma Fc receptor II/III/IV^c, insulin^c, insulin gene enhancer protein ISL-1^c, insulinoma-associated protein 1^c, integrin alpha-M^c, interleukin-2 receptor subunit beta^c, interleukin-3 receptor class 2 alpha chain^c, interleukin-5 receptor subunit alpha^c, interleukin-7 receptor subunit alpha^c, leukosialin^c, lymphocyte antigen 6G^c, lymphocyte antigen 76^c, mast/stem cell growth factor receptor^c, membrane-spanning 4-domains subfamily A member 1^c, neprilysin^c, neural cell adhesion molecule 1^c, neurogenic differentiation factor 1^c, neurogenin-3^c, paired box protein PAX-5^c, pancreas transcription factor 1 subunit alpha^c, pancreas/duodenum homeobox protein 1^c, prominin-1^c, receptor-type tyrosine-protein phosphatase C^c, recombining binding protein suppressor of hairless^c, recombining binding protein suppressor of hairless-like protein^c, signal transducer CD24^c, transcription factor MafA^c, transcription factor PU.1^c, transcription factor SOX-17^c, transferrin receptor protein 1^c, tumor necrosis factor ligand superfamily member 5^c, urokinase plasminogen activator surface receptor^c, vascular endothelial growth factor receptor 2^c

protein and DNA interaction identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001398

has super-classes: sequence feature identification objective^c

protein and RNA interaction identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001854

has super-classes: sequence feature identification objective^c

protein binding site identification design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001425

is equivalent to: has part^op some protein and DNA interaction identification objective^c
has super-classes: study design^c
has sub-classes: ChIP-chip design^c, ChIP-seq design^c

protein complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043234

has super-classes: macromolecular complex^c
has sub-classes: MHC protein complex^c, adaptive immune receptor^c, catalytic complex^c, immunoglobulin complex^c, receptor complex^c

protein extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000894

has super-classes: extract^c; has part^op some protein^c; is_specified_output_of^op some extraction^c

protein metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0019538

has super-classes: macromolecule metabolic process^c; primary metabolic process^c
has sub-classes: cellular protein metabolic process^c, protein modification process^c

protein microarray^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400149

has super-classes: microarray^c

protein modification process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0036211

has super-classes: protein metabolic process^c; macromolecule modification^c
has sub-classes: cellular protein modification process^c

protein secreting cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000154

is equivalent to: secretory cell^c and (capable of^op some protein secretion^c)
has super-classes: secretory cell^c; capable of^op some protein secretion^c
has sub-classes: acinar cell^c, insulin secreting cell^c

protein secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0009306

has super-classes: protein transport^c; secretion by cell^c
has sub-classes: insulin secretion^c

protein sequencing by tandem mass spectrometry assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001923

has super-classes: sequencing assay^c; has part^op some protease cleavage^c; has_specified_output^op some sequence data^c; realizes^op some evaluant role^c and (role of^op some protein^c); has participant^op some tandem mass spectrometer^c

protein transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0015031

has super-classes: localization^c; establishment of localization^c; organic substance transport^c
has sub-classes: protein secretion^c

protein_coding_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001217

has super-classes: gene^c

proteomic profiling by array assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001318

has super-classes: analyte assay^c; achieves_planned_objective^op some molecular feature identification objective^c; has_specified_input^op some specimen^c and (has part^op some protein^c); has participant^op some protein microarray^c; realizes^op some analyte role^c and (role of^op some protein^c)

proteomic profiling by array design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001441

has super-classes: study design^c; has part^op some molecular feature identification objective^c; is concretized as^op some realized in^op some (has part^op some proteomic profiling by array assay^c) and (has participant^op some protein microarray^c)

protocol^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000272

has super-classes: plan specification^c

protocol optimization design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001401

has super-classes: study design^c; has part^op some protocol optimization objective^c

protocol optimization objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000186

has super-classes: protocol testing objective^c

protocol testing objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000096

has super-classes: methodology testing objective^c
has sub-classes: protocol optimization objective^c

pseudogene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000336

has super-classes: biological_region^c

pseudogenic_gene_segment^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001741

has super-classes: gene_segment^c

pseudogenic_region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000462

has super-classes: biological_region^c

pseudostratified ciliated columnar epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0010499

has super-classes: simple columnar epithelium^c; ciliated columnar epithelium^c
has sub-classes: olfactory epithelium^c

Ptf1a-expressing multipotent pancreatic cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000049

has super-classes: non-terminally differentiated cell^c; participates in^op some pancreas development^c; bearer of^op some multipotent^c; part of^op some pancreatic epithelial bud^c; has part^op some pancreas transcription factor 1 subunit alpha^c

Ptf1a-lacking pancreatic progenitor cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000050

has super-classes: non-terminally differentiated cell^c; lacks_part^op some pancreas transcription factor 1 subunit alpha^c; part of^op some pancreatic epithelial bud^c

Ptf1a{(tdTomato)} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004149

has super-classes: mouse strain^c

Ptf1a{LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000253

has super-classes: stem cell derived cell line^c

Ptf1a{rtTA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004015

has super-classes: stem cell derived cell line^c

Ptf1a{tdTOM} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004032

has super-classes: stem cell derived cell line^c

Ptf1a{tm1(tTAoff)Macd} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000207

has super-classes: mouse strain^c

Ptf1a{tm1Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000018

has super-classes: mouse strain^c

Ptf1a{tm2(cre/ESR1)Cvw} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000244

has super-classes: mouse strain^c

Ptf1a{tm2(rtTA)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004021

has super-classes: mouse strain^c

Ptf1a{tm2(W298A)Macd} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000218

has super-classes: mouse strain^c

Ptf1a{tm3Cvw} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000248

has super-classes: mouse strain^c

Ptf1a{tm3Macd} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001001

has super-classes: mouse strain^c

Ptf1a{YFP} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000254

has super-classes: stem cell derived cell line^c

publication^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000311

has super-classes: document^c
has sub-classes: publication about an investigation^c

publication about an investigation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000312

has super-classes: publication^c; is about^op some investigation^c

PubMed ID^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001617

has super-classes: centrally registered identifier symbol^c; denotes^op only publication about an investigation^c
is in range of: associated PubMed ID^op

purification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001505

is equivalent to: achieves_planned_objective^op some purification objective^c
has super-classes: material component separation^c

purification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000796

has super-classes: separation into different composition objective^c

pyloric antrum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001165

has super-classes: organ part^c

pyrimidine 2'-deoxyribonucleoside^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_19255

has super-classes: 2'-deoxyribonucleoside^c; pyrimidine deoxyribonucleoside^c
has sub-classes: 5-bromo-2'-deoxyuridine^c

pyrimidine deoxyribonucleoside^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_68472

has super-classes: deoxyribonucleoside^c; pyrimidine nucleoside^c
has sub-classes: pyrimidine 2'-deoxyribonucleoside^c

pyrimidine nucleoside^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_26440

has super-classes: nucleoside^c; diazines^c
has sub-classes: pyrimidine deoxyribonucleoside^c

pyrosequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000730

has super-classes: DNA sequencing by synthesis^c; has participant^op some 454 Genome Sequence 20^c or 454 Genome Sequencer FLX^c

QTL^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000771

has super-classes: biological_region^c

qualitative^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000068

TODO: define this or obsolete it and move children somewhere else.

has super-classes: quality^c
has sub-classes: deviation(from_normal)^c

quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000019

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: specifically dependent continuant^c
has sub-classes: device setting^c, phenotype^c, quality^c, relational quality^c
is in range of: has quality^op, is quality measurement of^op
is disjoint with: realizable entity^c

quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000001

has super-classes: quality^c
has sub-classes: physical object quality^c, qualitative^c
is in domain of: different_in_magnitude_relative_to^op, increased_in_magnitude_relative_to^op
is in range of: different_in_magnitude_relative_to^op, increased_in_magnitude_relative_to^op

quality control testing design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001336

has super-classes: study design^c

quantile transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200028

has super-classes: normalization data transformation^c; center calculation data transformation^c; (has_specified_output^op some center value^c) and (achieves_planned_objective^op some center calculation objective^c); achieves_planned_objective^op some data normalization objective^c

R7T1 cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000123

has super-classes: immortal animal cell line cell^c

radiation unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000127

has super-classes: measurement unit label^c
has sub-classes: Roentgen equivalent man^c, activity (of a radionuclide) unit^c, roentgen^c

Raji cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0008734

has super-classes: immortal cell line cell^c

randomized complete block design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500007

has super-classes: intervention design^c
has sub-classes: graeco latin square design^c, hyper graeco latin square design^c, latin square design^c

rat strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000003

is equivalent to: Rattus norvegicus^c and (is_specified_output_of^op some planned process^c and (achieves_planned_objective^op some selective organism creation objective^c))
has super-classes: Rattus norvegicus^c; selectively maintained organism^c
has sub-classes: ICR^c

Rattus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_10114

has super-classes: Murinae^c
has sub-classes: Rattus norvegicus^c

Rattus norvegicus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_10116

has super-classes: Rattus^c
has sub-classes: rat strain^c

Rbpjl{tm1(lacZ)Macd} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000219

has super-classes: mouse strain^c

read^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000150

has super-classes: region^c
has sub-classes: BAC_end^c, YAC_end^c

reagent role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000086

(copied from ReO) Reagents are distinguished from instruments or devices that also participate in scientific techniques by the fact that reagents are chemical or biological in nature and necessarily participate in or have parts that participate in some chemical interaction or reaction during their intended participation in some technique. By contrast, instruments do not participate in a chemical reaction/interaction during the technique. Reagents are distinguished from study subjects/evaluants in that study subjects and evaluants are that about which conclusions are drawn and knowledge is sought in an investigation - while reagents, by definition, are not. It should be noted, however, that reagent and study subject/evaluant roles can be borne by instances of the same type of material entity - but a given instance will realize only one of these roles in the execution of a given assay or technique. For example, taq polymerase can bear a reagent role or an evaluant role. In a DNA sequencing assay aimed at generating sequence data about some plasmid, the reagent role of the taq polymerase is realized. In an assay to evaluate the quality of the taq polymerase itself, the evaluant/study subject role of the taq is realized, but not the reagent role since the taq is the subject about which data is generated. In regard to the statement that reagents are 'distinct' from the specified outputs of a technique, note that a reagent may be incorporated into a material output of a technique, as long as the IDENTITY of this output is distinct from that of the bearer of the reagent role. For example, dNTPs input into a PCR are reagents that become part of the material output of this technique, but this output has a new identity (ie that of a 'nucleic acid molecule') that is distinct from the identity of the dNTPs that comprise it. Similarly, a biotin molecule input into a cell labeling technique are reagents that become part of the specified output, but the identity of the output is that of some modified cell specimen which shares identity with the input unmodified cell specimen, and not with the biotin label. Thus, we see that an important criteria of 'reagent-ness' is that it is a facilitator, and not the primary focus of an investigation or material processing technique (ie not the specified subject/evaluant about which knowledge is sought, or the specified output material of the technique).

has super-classes: role^c

real time polymerase chain reaction assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000893

has super-classes: assay^c; has part^op some polymerase chain reaction^c

realizable entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000017

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: specifically dependent continuant^c
has sub-classes: disposition^c, function^c, role^c
is in domain of: realized in^op
is in range of: realizes^op
is disjoint with: quality^c

receptor complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043235

has super-classes: protein complex^c
has sub-classes: B cell receptor complex^c, T cell receptor complex^c

receptor-type tyrosine-protein phosphatase C^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001006

has super-classes: protein^c
has sub-classes: receptor-type tyrosine-protein phosphatase C isoform CD45RA^c

receptor-type tyrosine-protein phosphatase C isoform CD45RA^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001015

has super-classes: receptor-type tyrosine-protein phosphatase C^c

recombinant vector^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000731

is equivalent to: material entity^c and (is_specified_output_of^op some recombinant vector cloning^c)
has super-classes: processed material^c
has sub-classes: cDNA library^c, phage display library^c

recombinant vector cloning^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600064

has super-classes: adding a material entity into a target^c; realizes^op some cloning vector role^c; has_specified_input^op some cloning vector^c; has_specified_output^op some recombinant vector^c; has_specified_input^op some material entity^c and (has role^op some cloning insert role^c); achieves_planned_objective^op some material transformation objective^c
has sub-classes: vector mediated amplification^c

recombining binding protein suppressor of hairless^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000013824

has super-classes: protein^c

recombining binding protein suppressor of hairless-like protein^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000013825

has super-classes: protein^c

record of missing knowledge^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000852

has super-classes: information content entity^c
has sub-classes: record of unknown sex^c

record of unknown sex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000858

has super-classes: record of missing knowledge^c; is about^op some biological sex^c

reduced representation bisulfite sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001862

has super-classes: bisulfite sequencing^c; has part^op some specific enzymatic cleavage^c; has part^op some library preparation^c

reference design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500010

has super-classes: study design^c

reference subject role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000220

has super-classes: participant under investigation role^c; inheres in^op some organism^c or specimen^c
has sub-classes: biological replicate role^c, technical replicate role^c

reference substance role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000025

has super-classes: role^c; inheres in^op some material entity^c
has sub-classes: dye swap quality control role^c, nucleic acid template role^c, spike-in quality control role^c

region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000001

has super-classes: sequence_feature^c
has sub-classes: biological_region^c, primary structure of DNA macromolecule^c, primary structure of RNA molecule^c, read^c

regional part of brain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002616

has super-classes: multi-tissue structure^c; ectoderm-derived structure^c
has sub-classes: Ammon's horn^c, cerebellum^c, dorsal plus ventral thalamus^c, hindbrain^c, hypothalamus^c, midbrain^c, olfactory bulb^c, pons^c, prefrontal cortex^c, preoptic area^c, ventral tegmental area^c

regulation of biological process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0050789

has super-classes: biological regulation^c
has sub-classes: regulation of cellular process^c, regulation of developmental process^c, regulation of immune response^c, regulation of immune system process^c, regulation of metabolic process^c, regulation of multicellular organismal development^c

regulation of biological quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0065008

has super-classes: biological regulation^c
has sub-classes: regulation of body fluid levels^c, regulation of hormone levels^c

regulation of body fluid levels^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0050878

has super-classes: single-multicellular organism process^c; regulation of biological quality^c
has sub-classes: blood coagulation^c

regulation of cell differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0045595

has super-classes: regulation of developmental process^c; regulation of cellular process^c
has sub-classes: regulation of leukocyte differentiation^c

regulation of cell-cell adhesion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0022407

has super-classes: regulation of cellular process^c
has sub-classes: regulation of T cell activation^c

regulation of cellular metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0031323

has super-classes: regulation of metabolic process^c; regulation of cellular process^c
has sub-classes: regulation of nucleobase-containing compound metabolic process^c

regulation of cellular process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0050794

has super-classes: regulation of biological process^c
has sub-classes: regulation of cell differentiation^c, regulation of cell-cell adhesion^c, regulation of cellular metabolic process^c, regulation of leukocyte activation^c

regulation of developmental process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0050793

has super-classes: regulation of biological process^c
has sub-classes: regulation of cell differentiation^c, regulation of multicellular organismal development^c

regulation of DNA metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0051052

has super-classes: regulation of nucleobase-containing compound metabolic process^c; regulation of macromolecule metabolic process^c
has sub-classes: regulation of DNA methylation^c

regulation of DNA methylation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044030

has super-classes: regulation of DNA metabolic process^c

regulation of hemopoiesis^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_1903706

has super-classes: regulation of immune system process^c; regulation of multicellular organismal development^c
has sub-classes: regulation of leukocyte differentiation^c

regulation of hormone levels^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0010817

has super-classes: regulation of biological quality^c
has sub-classes: hormone transport^c

regulation of immune response^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0050776

has super-classes: regulation of immune system process^c; regulation of biological process^c

regulation of immune system process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002682

has super-classes: regulation of biological process^c
has sub-classes: regulation of hemopoiesis^c, regulation of immune response^c, regulation of leukocyte activation^c

regulation of leukocyte activation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002694

has super-classes: regulation of immune system process^c; regulation of cellular process^c
has sub-classes: regulation of lymphocyte activation^c

regulation of leukocyte differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_1902105

has super-classes: regulation of cell differentiation^c; regulation of hemopoiesis^c
has sub-classes: regulation of lymphocyte differentiation^c

regulation of lymphocyte activation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0051249

has super-classes: regulation of leukocyte activation^c
has sub-classes: regulation of T cell activation^c, regulation of lymphocyte differentiation^c

regulation of lymphocyte differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0045619

has super-classes: regulation of lymphocyte activation^c; regulation of leukocyte differentiation^c
has sub-classes: regulation of T cell differentiation^c

regulation of macromolecule metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0060255

has super-classes: regulation of metabolic process^c
has sub-classes: DNA methylation^c, regulation of DNA metabolic process^c

regulation of metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0019222

has super-classes: regulation of biological process^c
has sub-classes: regulation of cellular metabolic process^c, regulation of macromolecule metabolic process^c, regulation of nitrogen compound metabolic process^c, regulation of primary metabolic process^c

regulation of molecular function, epigenetic^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0040030

has super-classes: biological regulation^c

regulation of multicellular organismal development^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_2000026

has super-classes: regulation of biological process^c; regulation of developmental process^c
has sub-classes: regulation of hemopoiesis^c

regulation of nitrogen compound metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0051171

has super-classes: regulation of metabolic process^c
has sub-classes: regulation of nucleobase-containing compound metabolic process^c

regulation of nucleobase-containing compound metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0019219

has super-classes: regulation of cellular metabolic process^c; regulation of nitrogen compound metabolic process^c; regulation of primary metabolic process^c
has sub-classes: regulation of DNA metabolic process^c

regulation of primary metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0080090

has super-classes: regulation of metabolic process^c
has sub-classes: regulation of nucleobase-containing compound metabolic process^c

regulation of T cell activation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0050863

has super-classes: regulation of cell-cell adhesion^c; regulation of lymphocyte activation^c
has sub-classes: regulation of T cell differentiation^c

regulation of T cell differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0045580

has super-classes: regulation of lymphocyte differentiation^c; regulation of T cell activation^c

relational quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000145

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: quality^c

repeated measure design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500002

has super-classes: intervention design^c
has sub-classes: cross over design^c

replicate analysis^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200057

has super-classes: normalization data transformation^c; achieves_planned_objective^op some data normalization objective^c
has sub-classes: dye swap merge^c

replicate design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500018

has super-classes: study design^c

reporting party role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000068

has super-classes: investigation agent role^c

reproductive organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003133

has super-classes: organ^c; reproductive structure^c
has sub-classes: female gonad^c, gonad^c, testis^c

reproductive process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0022414

has super-classes: biological_process^c
has sub-classes: developmental process involved in reproduction^c, multi-organism reproductive process^c, multicellular organismal reproductive process^c, single organism reproductive process^c

reproductive structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005156

has super-classes: mesoderm-derived structure^c
has sub-classes: duct of male reproductive system^c, fallopian tube^c, myometrium^c, placenta^c, reproductive organ^c, sex gland^c, subdivision of uterine tube^c, uterine cervix^c

respiratory epithelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002368

is equivalent to: endo-epithelial cell^c and (part of^op some respiratory tract^c)
has super-classes: endo-epithelial cell^c; part of^op some respiratory tract^c
has sub-classes: epithelial cell of lower respiratory tract^c

respiratory system arterial blood vessel^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003643

has super-classes: blood vessel^c; arterial blood vessel^c
has sub-classes: respiratory system artery^c

respiratory system artery^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003469

has super-classes: artery^c; respiratory system arterial blood vessel^c
has sub-classes: pharyngeal arch artery^c

respiratory system epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004807

has super-classes: epithelium^c
has sub-classes: nose epithelium^c, respiratory tract epithelium^c

respiratory tract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000065

has super-classes: compound organ^c; endoderm-derived structure^c

respiratory tract epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004802

has super-classes: respiratory system epithelium^c; endo-epithelium^c
has sub-classes: lower respiratory tract epithelium^c, nasal cavity epithelium^c

respiratory tube^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000117

has super-classes: tube^c; endoderm-derived structure^c
has sub-classes: bronchus^c, trachea^c

response to carbohydrate^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0009743

has super-classes: response to stimulus^c
has sub-classes: detection of carbohydrate stimulus^c, response to monosaccharide^c

response to hexose^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0009746

has super-classes: response to monosaccharide^c
has sub-classes: detection of glucose^c, detection of hexose stimulus^c

response to monosaccharide^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0034284

has super-classes: response to carbohydrate^c
has sub-classes: detection of monosaccharide stimulus^c, response to hexose^c

response to stimulus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0050896

has super-classes: biological_process^c
has sub-classes: detection of carbohydrate stimulus^c, immune response^c, response to carbohydrate^c, response to stress^c

response to stress^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006950

has super-classes: response to stimulus^c
has sub-classes: innate immune response^c

reticulocyte^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000558

is equivalent to: erythroid lineage cell^c and (has plasma membrane part^op some transferrin receptor protein 1^c) and (capable of^op some extracellular exosome assembly^c) and (lacks_plasma_membrane_part^op some CD19 molecule^c) and (lacks_plasma_membrane_part^op some CD4 molecule^c) and (lacks_plasma_membrane_part^op some integrin alpha-M^c) and (lacks_plasma_membrane_part^op some CD3 epsilon^c) and (lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c) and (lacks_plasma_membrane_part^op some CD2 molecule^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c) and (lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c) and (lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c) and (lacks_plasma_membrane_part^op some CD14 molecule^c) and (lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c)
has super-classes: erythroid lineage cell^c; lacks_plasma_membrane_part^op some CD3 epsilon^c; lacks_plasma_membrane_part^op some CD4 molecule^c; lacks_plasma_membrane_part^op some integrin alpha-M^c; lacks_plasma_membrane_part^op some CD14 molecule^c; capable of^op some extracellular exosome assembly^c; lacks_plasma_membrane_part^op some membrane-spanning 4-domains subfamily A member 1^c; has plasma membrane part^op some transferrin receptor protein 1^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD5^c; lacks_plasma_membrane_part^op some neural cell adhesion molecule 1^c; lacks_plasma_membrane_part^op some lymphocyte antigen 6G^c; lacks_plasma_membrane_part^op some CD2 molecule^c; lacks_plasma_membrane_part^op some T-cell surface glycoprotein CD8 alpha chain^c; lacks_plasma_membrane_part^op some CD19 molecule^c; develops from^op some orthochromatic erythroblast^c

retina^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000966

has super-classes: ectoderm-derived structure^c; organ component layer^c

reverse transcribed polymerase chain reaction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000552

has super-classes: enzymatic amplification^c; has part^op some polymerase chain reaction^c and (immediately preceded by^op some artificially induced reverse transcription^c); has_specified_output^op some PCR product^c; has_specified_input^op some ribonucleic acid^c

reverse transcriptase^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000419

is equivalent to: enzyme^c and (has function^op some RNA-directed DNA polymerase activity^c)
has super-classes: enzyme^c

reverse transcription polymerase chain reaction assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001170

has super-classes: assay^c; has_specified_output^op some information content entity^c and (is about^op some gene expression^c); has part^op some reverse transcribed polymerase chain reaction^c; has_specified_input^op some ribonucleic acid^c and (has role^op some evaluant role^c)

ribonucleic acid^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33697

has super-classes: nucleic acid^c

ribonucleoprotein complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030529

has super-classes: macromolecular complex^c; intracellular part^c
has sub-classes: ribosome^c

ribosomal profiling by sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002038

has super-classes: RNA-seq assay^c

ribosome^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0005840

has super-classes: ribonucleoprotein complex^c; intracellular non-membrane-bounded organelle^c; cytoplasmic part^c

Rik{tm1.1Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000196

has super-classes: mouse strain^c

Rik{tm1.3Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000195

has super-classes: mouse strain^c

RNA Annotation and Mapping of Promoters for the Analysis of Gene Expression assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001864

has super-classes: transcription profiling assay^c; sequencing assay^c; has part^op some RNA sequencing^c; has part^op some library preparation^c; has participant^op some DNA sequencer^c; has_specified_input^op some ribonucleic acid^c and (has role^op some evaluant role^c); has part^op some non specific enzymatic cleavage^c; has_specified_output^op some DNA sequence data^c; achieves_planned_objective^op some transcription start site identification objective^c

RNA Bind-n-Seq assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002044

has super-classes: RNA-seq assay^c

RNA extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000880

has super-classes: nucleic acid extract^c; has grain^op some ribonucleic acid^c; is_specified_output_of^op some RNA extraction^c
has sub-classes: cytoplasmic RNA extract^c, nuclear RNA extract^c, organellar RNA extract^c, polyA RNA extract^c, total RNA extract^c

RNA extraction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0666666

has super-classes: nucleic acid extraction^c; has_specified_output^op some ribonucleic acid^c
has sub-classes: cytoplasmic RNA extraction^c, nuclear RNA extraction^c, organellar RNA extraction^c, polyA RNA extraction^c, total RNA extraction^c

RNA sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001177

is equivalent to: (has_specified_input^op some ribonucleic acid^c and (has role^op some evaluant role^c)) and (has_specified_output^op some information content entity^c and (is about^op some primary structure of RNA molecule^c))
has super-classes: sequencing assay^c

RNA stability design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001306

has super-classes: study design^c; has part^op some molecular feature identification objective^c and (is about^op some ribonucleic acid^c)

RNA-directed DNA polymerase activity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0003964

has super-classes: catalytic activity^c

RNA-seq assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001271

has super-classes: transcription profiling assay^c; sequencing assay^c; achieves_planned_objective^op some transcription profiling identification objective^c; has participant^op some DNA sequencer^c; has_specified_input^op some specimen^c and (has part^op some ribonucleic acid^c); has_specified_output^op some sequence data^c and (is about^op some gene expression^c); realizes^op some analyte role^c and (role of^op some ribonucleic acid^c)
has sub-classes: RNA Bind-n-Seq assay^c, microRNA profiling by high throughput sequencing assay^c, poly(A)-site sequencing assay^c, ribosomal profiling by sequencing assay^c, self-transcribing active regulatory region sequencing assay^c, transcript leader sequencing^c, translation-associated transcript leader sequencing^c

RNAi profiling by array assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001304

has super-classes: analyte assay^c; has participant^op some DNA microarray^c; achieves_planned_objective^op some molecular feature identification objective^c; realizes^op some analyte role^c and (role of^op some ribonucleic acid^c)

RNAi profiling by array design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001286

has super-classes: study design^c; has part^op some molecular feature identification objective^c; is concretized as^op some realized in^op some (has part^op some RNAi profiling by array assay^c) and (has participant^op some DNA microarray^c)

RNase_MRP_RNA_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001640

has super-classes: ncRNA_gene^c

RNase_P_RNA_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001639

has super-classes: ncRNA_gene^c

RNP (ribonuclear particle) immunoprecipitation high- throughput sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001857

has super-classes: immunoprecipitation assay^c; sequencing assay^c; has_specified_input^op some protein complex^c and (has role^op some evaluant role^c); has_specified_output^op some DNA sequence data^c; has part^op some library preparation^c; has part^op some RNA sequencing^c; achieves_planned_objective^op some protein and RNA interaction identification objective^c; achieves_planned_objective^op some analyte measurement objective^c; has part^op some cross linking^c; has part^op some immunoprecipitation^c; has participant^op some DNA sequencer^c; has participant^op some sonicator^c

roentgen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000136

has super-classes: radiation unit^c

Roentgen equivalent man^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000140

has super-classes: radiation unit^c

role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000023

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: realizable entity^c
has sub-classes: analyte role^c, cloning insert role^c, evaluant role^c, host role^c, investigation agent role^c, manufacturer role^c, material to be added role^c, molecular label role^c, nutrient role^c, participant under investigation role^c, reagent role^c, reference substance role^c, service provider role^c, specimen role^c, target of material addition role^c
is in range of: has role^op
is disjoint with: disposition^c

Rosa26{(-60.IBRE4.TACerulean)Hri} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004012

has super-classes: mouse strain^c

Rosa26{(3TF.Cherry)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004075

has super-classes: mouse strain^c

Rosa26{(mlre1.IG.Cherry)Fpa} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004026

has super-classes: mouse strain^c

Rosa26{(mlre1.WT.Cherry)Fpa} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004025

has super-classes: mouse strain^c

Rosa26{(Nepn.Cherry)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004022

has super-classes: mouse strain^c

Rosa26{(Ngn3.CFP)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002582

has super-classes: mouse strain^c

ROSA26{(Nkx2.2.CFP)Suss} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9003042

has super-classes: mouse strain^c

Rosa26{(Pdx1.YFP)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004062

has super-classes: mouse strain^c

Rosa26{(R26-228-IBRE4-TA-Cerulean)Hri} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004027

has super-classes: mouse strain^c

Rosa26{(Setd5.GFP)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004147

has super-classes: mouse strain^c

Rosa26{(TetO.NRSF)Msan} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004152

has super-classes: mouse strain^c

Rosa26{(TetO.Sox9)Msan} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004030

has super-classes: mouse strain^c

Rosa26{-228.3XCNotch.TA.Cerulean} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002822

has super-classes: stem cell derived cell line^c

Rosa26{-228.6XNotch.TA.Cerulean} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002842

has super-classes: stem cell derived cell line^c

Rosa26{228.3TF.GFP-CreMgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004537

has super-classes: mouse strain^c

Rosa26{228.3TF.GFP.Cre} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004159

has super-classes: stem cell derived cell line^c

Rosa26{228.TOP.CFPHri} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004534

has super-classes: mouse strain^c

Rosa26{228.TOP.CFP} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004148

has super-classes: stem cell derived cell line^c

Rosa26{3TF.Cherry} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004074

has super-classes: stem cell derived cell line^c

Rosa26{Apple.bGsplicepA.Neo} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004018

has super-classes: stem cell derived cell line^c

Rosa26{EN-CFP-bGpA-Neo} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002562

has super-classes: stem cell derived cell line^c

Rosa26{EN-CFP-Neo} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002502

has super-classes: stem cell derived cell line^c

Rosa26{EN-Cherry-Neo} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002281

has super-classes: stem cell derived cell line^c

Rosa26{EN-GFP-Neo} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002542

has super-classes: stem cell derived cell line^c

Rosa26{EN.CFP.SV40.Neo} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002522

has super-classes: stem cell derived cell line^c

Rosa26{EN.YFP.bGsplicepA.Neo} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004017

has super-classes: stem cell derived cell line^c

Rosa26{LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000262

has super-classes: stem cell derived cell line^c

Rosa26{mIre1.IG.Cherry} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004024

has super-classes: stem cell derived cell line^c

Rosa26{mIre1.N906A.CherryMgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004560

has super-classes: mouse strain^c

Rosa26{mIre1.N906A.Cherry} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004160

has super-classes: stem cell derived cell line^c

Rosa26{mIre1.WT.Cherry} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004023

has super-classes: stem cell derived cell line^c

Rosa26{Nepn.Cherry} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004016

has super-classes: stem cell derived cell line^c

Rosa26{Ngn3.Mafa} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004019

has super-classes: stem cell derived cell line^c

Rosa26{Non-EN-CFP-Neo} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002401

has super-classes: stem cell derived cell line^c

Rosa26{Pdx1.YFP} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004061

has super-classes: stem cell derived cell line^c

Rosa26{R26-228-AR8-TA-mCherry} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002782

has super-classes: stem cell derived cell line^c

Rosa26{R26-228-DR5-TA-Cerulean} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000982

has super-classes: stem cell derived cell line^c

Rosa26{R26-228-IBRE4-TA-Cerulean} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002002

has super-classes: stem cell derived cell line^c

Rosa26{R26-60-3XCNotch-TA-Cerulean} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002742

has super-classes: stem cell derived cell line^c

Rosa26{R26-60-6XNotch-TA-Cerulean} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002802

has super-classes: stem cell derived cell line^c

Rosa26{R26-60-AR8-TA-mCherry} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002762

has super-classes: stem cell derived cell line^c

Rosa26{R26-60-DR5-TA-Cerulean} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000981

has super-classes: stem cell derived cell line^c

Rosa26{R26-60-IBRE4-TA-Cerulean} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002001

has super-classes: stem cell derived cell line^c

Rosa26{Setd5.GFP} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004056

has super-classes: stem cell derived cell line^c

Rosa26{Sox9.Cherry} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004029

has super-classes: stem cell derived cell line^c

Rosa26{TetO.NRSF} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004031

has super-classes: stem cell derived cell line^c

Rosa26{tm1(Ccnd1)} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001961

has super-classes: stem cell derived cell line^c

Rosa26{tm1.1(R26-60-DR5-TA-Cerulean)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001241

has super-classes: mouse strain^c

Rosa26{tm1.2(R26-228-DR5-TA-Cerulean)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001281

has super-classes: mouse strain^c

Rosa26{tm1.4(MafA-Cherry)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9002702

has super-classes: mouse strain^c

Rosa26{tm2Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004020

has super-classes: mouse strain^c

Rosa26{tm3Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004054

has super-classes: mouse strain^c

Rosa26{tm4Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004055

has super-classes: mouse strain^c

rRNA_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001637

has super-classes: ncRNA_gene^c

sac^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0009856

has super-classes: anatomical structure^c
has sub-classes: bladder organ^c, digestive tract diverticulum^c, epithelial sac^c

Saccharomyces cerevisiae mating type^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001342

has super-classes: yeast mating type^c
has sub-classes: a mating type (yeast)^c, alpha mating type (yeast)^c

saliva-secreting gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001044

has super-classes: oral gland^c
has sub-classes: major salivary gland^c, parotid gland^c

sample from organism^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000671

is equivalent to: (is_specified_output_of^op some collecting specimen from organism^c) and (has role^op some material sample role^c)
has super-classes: material sample^c; tissue specimen^c; derives from^op some gross anatomical part^c

sampling time measurement datum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001508

has super-classes: time measurement datum^c

sarcomere^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030017

has super-classes: contractile fiber part^c

Sauria^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_32561

has super-classes: Amniota^c
has sub-classes: Aves^c, Serpentes^c

scalar measurement datum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000032

has super-classes: measurement datum^c; has measurement value^dp min 1; has measurement unit label^op min 1; has value specification^op some scalar value specification^c
has sub-classes: time measurement datum^c
is in domain of: has measurement value^dp

scalar value specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001931

has super-classes: value specification^c; has specified value^dp min 1; has measurement unit label^op min 1

scaling data transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200185

is equivalent to: achieves_planned_objective^op some scaling objective^c
has super-classes: data transformation^c
has sub-classes: loess scale group transformation^c

scaling objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200183

has super-classes: data transformation objective^c

Schizosaccharomyces pombe mating type^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001343

has super-classes: yeast mating type^c
has sub-classes: h minus^c, h plus^c

scRNA_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001266

has super-classes: ncRNA_gene^c

sebaceous gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001821

has super-classes: exocrine gland^c; skin gland^c; exocrine gland of integumental system^c
has sub-classes: preputial gland^c

second^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000010

has super-classes: time unit^c; base unit^c

secondary cultured cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001866

A secondary cultured cell has been passaged in culture or is a descendant of such a cell that is derived through propagation in culture.

has super-classes: cultured cell^c; (is_specified_output_of^op some cell culture splitting^c) or (derives from^op some is_specified_output_of^op some cell culture splitting^c); derives from^op some primary cultured cell^c

secondary cultured cell population^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001905

The concept of a 'secondary cultured cell population' covers cell lines as well as cultured cell populations more immediately derived from a primary culture which have yet to achieve adequate genetic stability and compositional homogeneity to be considered a cell line. The extent of the collection of cells in a 'secondary cultured cell population' is restricted only in that all cell members must share a propagation history (ie be derived through a common lineage of passages from an initial culture). Secondary cultured cell populations can be under active culture, stored in a quiescent state for future use, or applied experimentally.

has super-classes: cultured cell population^c; is_specified_output_of^op some cell culture splitting^c; has grain^op some secondary cultured cell^c; has grain^op only secondary cultured cell^c

secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0046903

has super-classes: single-organism transport^c
has sub-classes: peptide secretion^c, secretion by cell^c

secretion by cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0032940

has super-classes: single-organism cellular process^c; secretion^c; establishment of localization^c
has sub-classes: catecholamine secretion^c, protein secretion^c, serotonin secretion^c, signal release^c

secretory cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000151

is equivalent to: native cell^c and (capable of^op some secretion by cell^c)
has super-classes: native cell^c; capable of^op some secretion by cell^c
has sub-classes: endocrine cell^c, exocrine cell^c, glandular epithelial cell^c, peptide hormone secreting cell^c, protein secreting cell^c

secretory granule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030141

has super-classes: cytoplasmic membrane-bounded vesicle^c
has sub-classes: azurophil granule^c

secretory granule membrane^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030667

has super-classes: cytoplasmic vesicle membrane^c; organelle membrane^c
has sub-classes: zymogen granule membrane^c

segment of aorta^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005800

has super-classes: organ segment^c; mesoderm-derived structure^c
has sub-classes: abdominal aorta^c, thoracic aorta^c

segment of colon^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000168

has super-classes: organ segment^c; subdivision of digestive tract^c
has sub-classes: ascending colon^c, sigmoid colon^c

segment of respiratory tract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000072

has super-classes: organ segment^c; endoderm-derived structure^c
has sub-classes: lower respiratory tract^c

selective organism creation objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001175

has super-classes: objective specification^c

selectively maintained organism^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001185

is equivalent to: organism^c and (is_specified_output_of^op some planned process^c and (achieves_planned_objective^op some selective organism creation objective^c))
has super-classes: organism^c
has sub-classes: mouse strain^c, rat strain^c
is in range of: is about strain^op

self vs self design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500019

has super-classes: study design^c

self-transcribing active regulatory region sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002041

has super-classes: RNA-seq assay^c

seminal vesicle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000998

has super-classes: male reproductive gland^c

seminiferous tubule of testis^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001343

has super-classes: duct of male reproductive system^c

sense organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000020

has super-classes: organ^c
has sub-classes: eye^c, tongue^c, vomeronasal organ^c

separation into different composition objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000681

has super-classes: material separation objective^c
has sub-classes: purification objective^c

sequence data^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000973

has super-classes: measurement datum^c; measurement datum^c and (is about^op some region^c)
has sub-classes: DNA sequence data^c

sequence feature annotation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000905

place holder for sequence ontology term

has super-classes: information content entity^c
has sub-classes: transcription factor binding site^c

sequence feature identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000113

has super-classes: biological feature identification objective^c
has sub-classes: protein and DNA interaction identification objective^c, protein and RNA interaction identification objective^c

sequence feature quantification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000010

has super-classes: data transformation^c; has_specified_output^op some scalar measurement datum^c and (is about^op some sequence_feature^c)

sequence-specific DNA binding^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0043565

has super-classes: molecular_function^c

sequence_feature^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000110

has super-classes: generically dependent continuant^c
has sub-classes: region^c

sequencing assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600047

is equivalent to: (has_specified_output^op some sequence data^c) and (achieves_planned_objective^op some assay objective^c)
has super-classes: assay^c; has_specified_input^op some (deoxyribonucleic acid^c or ribonucleic acid^c or protein^c) and (has role^op some evaluant role^c)
has sub-classes: Carbon-copy chromosome conformation capture assay^c, ChIP-seq assay^c, DNA replication timing by sequencing assay^c, DNA sequencing^c, Edman degradation^c, MeDIP-seq assay^c, RNA Annotation and Mapping of Promoters for the Analysis of Gene Expression assay^c, RNA sequencing^c, RNA-seq assay^c, RNP (ribonuclear particle) immunoprecipitation high- throughput sequencing assay^c, cap analysis of gene expression ^c, chromatin interaction analysis by paired-end tag sequencing^c, cross-linking immunoprecipitation high-throughput sequencing assay^c, micrococcal nuclease digestion followed by high throughput sequencing assay^c, protein sequencing by tandem mass spectrometry assay^c, taxonomic diversity assessment by targeted gene survey^c, transcript analysis by paired-end tag sequencing^c

sequential design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0300310

has super-classes: intervention design^c

serotonin secreting cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000458

is equivalent to: secretory cell^c and (capable of^op some serotonin secretion^c)
has super-classes: biogenic amine secreting cell^c; capable of^op some serotonin secretion^c
has sub-classes: platelet^c

serotonin secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0001820

has super-classes: serotonin transport^c; secretion by cell^c

serotonin transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006837

has super-classes: cation transport^c; ammonium transport^c; monoamine transport^c; organic hydroxy compound transport^c
has sub-classes: serotonin secretion^c

serous membrane^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000042

has super-classes: mesoderm-derived structure^c; cavity lining^c
has sub-classes: mesentery of oesophagus^c, peritoneum^c

Serpentes^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_8570

has super-classes: Sauria^c

service provider role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000947

has super-classes: role^c; inheres in^op some Homo sapiens^c or organization^c; realized in^op only planned process^c
has sub-classes: material supplier role^c

sex comparison design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001426

has super-classes: study design^c; has part^op some study design independent variable^c and (is about^op some biological sex^c); has part^op some organism feature identification objective^c

sex gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003937

has super-classes: gland^c; reproductive structure^c
has sub-classes: male reproductive gland^c, preputial gland^c

sexually immature stage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000112

has super-classes: life cycle stage^c

shape^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000052

Shapes are invariant on size transformations. Shapes can be subdivided into 2D and 3D shapes, We can also make a distinction between shapes of complete self-connected objects, and shapes of parts of objects.

has super-classes: morphology^c
has sub-classes: 2-D shape^c, 3-D shape^c, concavity^c, striated^c

shotgun bisulfite-seq assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001863

has super-classes: bisulfite sequencing^c; has participant^op some sonicator^c; has part^op some library preparation^c

sigmoid colon^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001159

has super-classes: segment of colon^c

signal release^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0023061

has super-classes: secretion by cell^c
has sub-classes: hormone secretion^c

signal transducer CD24^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001932

has super-classes: protein^c

simple columnar epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000485

has super-classes: epithelium^c; unilaminar epithelium^c
has sub-classes: ciliated columnar epithelium^c, epithelium of bronchus^c, pseudostratified ciliated columnar epithelium^c

simple squamous epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000487

has super-classes: unilaminar epithelium^c; squamous epithelium^c
has sub-classes: endothelium^c

single fragment library^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000736

has super-classes: processed material^c

single nucleate cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000226

is equivalent to: native cell^c and (bearer of^op some mononucleate^c)
has super-classes: nucleate cell^c; bearer of^op some mononucleate^c
has sub-classes: mononuclear cell^c

single organism cell adhesion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0098602

has super-classes: biological adhesion^c; single-organism process^c
has sub-classes: single organismal cell-cell adhesion^c

single organism reproductive process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044702

has super-classes: reproductive process^c; single-organism process^c
has sub-classes: gamete generation^c, germ cell development^c

single organismal cell-cell adhesion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0016337

has super-classes: single organism cell adhesion^c
has sub-classes: homotypic cell-cell adhesion^c, leukocyte cell-cell adhesion^c

single-multicellular organism process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044707

has super-classes: multicellular organismal process^c; single-organism process^c
has sub-classes: blood coagulation^c, circulatory system process^c, cytokine production^c, multicellular organismal movement^c, regulation of body fluid levels^c

single-organism cellular process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044763

has super-classes: cellular process^c; single-organism process^c
has sub-classes: cell cycle^c, cell death^c, cell motility^c, cellular developmental process^c, germ cell development^c, leukocyte activation^c, secretion by cell^c, single-organism organelle organization^c, stem cell division^c

single-organism developmental process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044767

has super-classes: developmental process^c; single-organism process^c
has sub-classes: cellular developmental process^c, endocrine pancreas development^c, pancreas development^c

single-organism localization^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_1902578

has super-classes: single-organism process^c; localization^c
has sub-classes: single-organism transport^c

single-organism metabolic process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044710

has super-classes: metabolic process^c; single-organism process^c
has sub-classes: chromosome condensation^c, histone modification^c

single-organism organelle organization^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_1902589

has super-classes: organelle organization^c; single-organism cellular process^c
has sub-classes: chromosome condensation^c, histone modification^c

single-organism process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044699

has super-classes: biological_process^c
has sub-classes: cell death^c, single organism cell adhesion^c, single organism reproductive process^c, single-multicellular organism process^c, single-organism cellular process^c, single-organism developmental process^c, single-organism localization^c, single-organism metabolic process^c, single-organism transport^c, type B pancreatic cell proliferation^c

single-organism transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044765

has super-classes: transport^c; single-organism process^c; single-organism localization^c
has sub-classes: amide transport^c, hormone transport^c, ion transport^c, monoamine transport^c, organic hydroxy compound transport^c, oxygen transport^c, secretion^c

site^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000029

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: immaterial entity^c
has sub-classes: geographical location^c
is disjoint with: spatial region^c, continuant fiat boundary^c

size^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000117

has super-classes: morphology^c
has sub-classes: increased size^c

skeletal element^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004765

has super-classes: organ^c
has sub-classes: bone element^c, dermal skeletal element^c, endochondral element^c, tooth-like structure^c

skeletal joint^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000982

has super-classes: multi organ part structure^c
has sub-classes: limb joint^c, synovial limb joint^c

skeletal muscle organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0014892

has super-classes: muscle organ^c; mesoderm-derived structure^c
has sub-classes: hindlimb zeugopod muscle^c

skeletal muscle tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001134

has super-classes: striated muscle tissue^c

skin epidermis^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001003

has super-classes: surface structure^c; outer epithelium^c

skin gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002419

has super-classes: gland of integumental system^c; ectoderm-derived structure^c; integumentary adnexa^c
has sub-classes: sebaceous gland^c

skull^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003129

has super-classes: anatomical cluster^c

small intestine^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002108

has super-classes: subdivision of digestive tract^c; digestive system element^c

small pancreatic ductal cell'^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000107

has super-classes: pancreatic ductal cell^c

smooth muscle tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001135

has super-classes: muscle tissue^c

snoRNA_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001267

has super-classes: ncRNA_gene^c

snRNA_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001268

has super-classes: ncRNA_gene^c

software^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000010

has super-classes: plan specification^c
has sub-classes: Feature Extraction Software^c, GLobal Identifier of Target Regions software^c, differential expression software^c

software optimization objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000055

has super-classes: software testing objective^c

software testing objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000242

has super-classes: methodology testing objective^c
has sub-classes: software optimization objective^c

soil^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ENVO_00001998

has super-classes: environmental material^c

soleus muscle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001389

has super-classes: hindlimb zeugopod muscle^c

Solexa sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000724

has super-classes: DNA sequencing by synthesis^c; has participant^op some Illumina Genome Analyzer II^c; has_specified_input^op some paired-end library^c or single fragment library^c; immediately preceded by^op some immobilization^c and (immediately preceded by^op some vector mediated amplification^c)

SOLiD sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000706

has super-classes: DNA sequencing by ligation^c; immediately preceded by^op some immobilization^c and (immediately preceded by^op some vector mediated amplification^c); has participant^op some AB SOLiD System^c; has_specified_input^op some paired-end library^c or single fragment library^c; has_specified_input^op some DNA ligase^c

solid support function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000399

has super-classes: function^c

somatic cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002371

has super-classes: native cell^c
has sub-classes: cardiocyte^c, connective tissue cell^c, duct epithelial cell^c, embryonic blood vessel endothelial progenitor cell^c, endo-epithelial cell^c, epithelial cell of gall bladder^c, epithelial cell of pancreas^c, glandular epithelial cell^c, hematopoietic cell^c, hepatocyte^c, melanoblast^c, melanocyte^c, meso-epithelial cell^c, multi fate stem cell^c, muscle cell^c, muscle precursor cell^c, somatic stem cell^c

somatic diversification of immune receptors^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002200

has super-classes: immune system process^c
has sub-classes: somatic diversification of immune receptors via germline recombination within a single locus^c, somatic recombination of immunoglobulin gene segments^c

somatic diversification of immune receptors via germline recombination within a single locus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002562

has super-classes: somatic diversification of immune receptors^c; DNA metabolic process^c
has sub-classes: immunoglobulin V(D)J recombination^c, somatic recombination of immunoglobulin gene segments^c

somatic recombination of immunoglobulin gene segments^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0016447

has super-classes: somatic diversification of immune receptors^c; somatic diversification of immune receptors via germline recombination within a single locus^c
has sub-classes: immunoglobulin V(D)J recombination^c

somatic stem cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000723

is equivalent to: stem cell^c and (capable of^op some somatic stem cell division^c)
has super-classes: stem cell^c; somatic cell^c; capable of^op some somatic stem cell division^c
has sub-classes: hematopoietic stem cell^c

somatic stem cell division^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0048103

has super-classes: stem cell division^c

somatostatin secreting cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000172

is equivalent to: secretory cell^c and (capable of^op some somatostatin secretion^c)
has super-classes: peptide hormone secreting cell^c; capable of^op some somatostatin secretion^c
has sub-classes: type D enteroendocrine cell^c

somatostatin secretion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0070253

has super-classes: peptide hormone secretion^c

sonicator^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400114

has super-classes: perturbation device^c; has function^op some perturb function^c

sort function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000403

has super-classes: material separation function^c

Sox17 expressiong H9 cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000111

has super-classes: H9 cell^c

Sox17-expressing definitive endodermal cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000046

has super-classes: endodermal cell^c; part of^op some definitive endoderm^c; has part^op some transcription factor SOX-17^c

Sox17-expressing Epcam+ pancreatic epithelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000047

has super-classes: epithelial cell^c; has plasma membrane part^op some epithelial cell adhesion molecule^c; part of^op some ventral pancreatic bud^c; has part^op some transcription factor SOX-17^c

Sox17{(GFPCre)Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000016

has super-classes: mouse strain^c

Sox17{GFPCre} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000602

has super-classes: stem cell derived cell line^c

Sox17{LCA} mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000263

has super-classes: stem cell derived cell line^c

Sox17{tm1.2Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9001101

has super-classes: mouse strain^c

spatial region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000006

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: immaterial entity^c
has sub-classes: one-dimensional spatial region^c, three-dimensional spatial region^c, two-dimensional spatial region^c, zero-dimensional spatial region^c
is disjoint with: site^c, continuant fiat boundary^c

spatiotemporal region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000011

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: occurrent^c
is disjoint with: temporal region^c, process^c, process boundary^c

species comparison design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001310

has super-classes: study design^c; has part^op some organism feature identification objective^c; has part^op some study design independent variable^c and (is about^op some organism^c)

specific enzymatic cleavage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600050

has super-classes: enzymatic cleavage^c

specifically dependent continuant^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000020

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: continuant^c
has sub-classes: quality^c, realizable entity^c
is in domain of: concretizes^op
is in range of: bearer of^op, is concretized as^op
is disjoint with: independent continuant^c, generically dependent continuant^c

specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0100051

is equivalent to: material entity^c and (has role^op some specimen role^c)
has super-classes: material entity^c
has sub-classes: cell specimen^c, material sample^c, processed specimen^c, specimen with known storage state^c, specimen with pre- or post-mortem status^c, tissue specimen^c, whole organism preparation^c

specimen collection objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000684

has super-classes: objective specification^c

specimen collection process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000659

is equivalent to: planned process^c and (achieves_planned_objective^op some specimen collection objective^c)
has super-classes: planned process^c; has_specified_output^op some specimen^c; has_specified_input^op some material entity^c
has sub-classes: collecting specimen from organism^c, histological sample preparation^c

specimen role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000112

has super-classes: role^c; inheres in^op some material entity^c and (is_specified_output_of^op some specimen collection process^c)
has sub-classes: material sample role^c

specimen with known storage state^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001472

is equivalent to: fresh specimen^c or (specimen^c and (is_specified_output_of^op some storage^c))
has super-classes: specimen^c
has sub-classes: agar stab specimen^c, fresh specimen^c, frozen specimen^c, lyophilized specimen^c, paraffin specimen^c

specimen with pre- or post-mortem status^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001506

is equivalent to: is_specified_output_of^op some specimen collection process^c and (has_specified_input^op some organism^c and (has quality^op some alive^c or dead^c))
has super-classes: specimen^c
has sub-classes: post mortem specimen^c, pre-mortem specimen^c

spectrophotometer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400115

has super-classes: measurement device^c; has function^op some measure function^c

spike-in quality control role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001140

has super-classes: reference substance role^c

spinal cord^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002240

has super-classes: organ^c; cavitated compound organ^c; ectoderm-derived structure^c; structure with developmental contribution from neural crest^c

spleen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002106

has super-classes: hemopoietic organ^c; immune organ^c; digestive system element^c; abdominal viscera^c

squamous epithelial cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000076

has super-classes: epithelial cell^c
has sub-classes: blood vessel endothelial cell^c

squamous epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0006914

has super-classes: epithelium^c
has sub-classes: pericardium^c, simple squamous epithelium^c

SRP_RNA^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000590

has super-classes: ncRNA^c

Sst.rTTA.LCA mouse ESC line ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004545

has super-classes: stem cell derived cell line^c

Sst{rTTA.LCA.Mgn} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9004561

has super-classes: mouse strain^c

staining^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302887

has super-classes: material processing^c; achieves_planned_objective^op some material transformation objective^c

stem cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000034

is equivalent to: native cell^c and (capable of^op some stem cell division^c)
has super-classes: precursor cell^c; capable of^op some stem cell division^c; capable of^op some cell differentiation^c
has sub-classes: embryonic stem cell^c, multi fate stem cell^c, somatic stem cell^c

stem cell derived cell line^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ERO_0001400

has super-classes: cell line^c
has sub-classes: Foxa2{LCA} mouse ESC line ^c, Foxm1{LCA} mouse ESC line ^c, Gck{LCA} mouse ESC line ^c, Ghrl{Cre-eGFP} mouse ESC line ^c, Ghrl{LCA} mouse ESC line ^c, Ins2{Apple.LCA} mouse ESC line ^c, Insm1{LCA} mouse ESC line ^c, Insm1{Pdx1.YFP} mouse ESC line ^c, MIP-GFP mouse ESC line ^c, Nepn{Cherry} mouse ESC line ^c, Neurog3{Cre-ER.BAC} mouse ESC line ^c, Neurog3{RG.BAC} mouse ESC line ^c, Ngn3-GFP mouse ESC line ^c, Ngn3{HA.LCA} mouse ESC line ^c, Ngn3{T2A.nCre} mouse ESC line ^c, Nkx2.2{3XHA.Nkx2.2} mouse ESC line ^c, Nkx2.2{Cherry} mouse ESC line ^c, Nkx2.2{Cre.EGFP} mouse ESC line ^c, Nkx2.2{LCA} mouse ESC line ^c, Nkx2.2{T2A.cCre} mouse ESC line ^c, Nkx2.2{cCre-Knock-in} mouse ESC line ^c, Pax4{HA.LCA} mouse ESC line ^c, Pdx1{AIVd} mouse ESC line ^c, Pdx1{CFP} mouse ESC line ^c, Pdx1{Cre.ER} mouse ESC line ^c, Pdx1{Cre} mouse ESC line ^c, Pdx1{H2B.Neptune} mouse ESC line ^c, Pdx1{LCA} mouse ESC line ^c, Pdx1{rTTA} mouse ESC line ^c, Ptf1a{LCA} mouse ESC line ^c, Ptf1a{YFP} mouse ESC line ^c, Ptf1a{rtTA} mouse ESC line ^c, Ptf1a{tdTOM} mouse ESC line ^c, Rosa26{-228.3XCNotch.TA.Cerulean} mouse ESC line ^c, Rosa26{-228.6XNotch.TA.Cerulean} mouse ESC line ^c, Rosa26{228.3TF.GFP.Cre} mouse ESC line ^c, Rosa26{228.TOP.CFP} mouse ESC line ^c, Rosa26{3TF.Cherry} mouse ESC line ^c, Rosa26{Apple.bGsplicepA.Neo} mouse ESC line ^c, Rosa26{EN-CFP-Neo} mouse ESC line ^c, Rosa26{EN-CFP-bGpA-Neo} mouse ESC line ^c, Rosa26{EN-Cherry-Neo} mouse ESC line ^c, Rosa26{EN-GFP-Neo} mouse ESC line ^c, Rosa26{EN.CFP.SV40.Neo} mouse ESC line ^c, Rosa26{EN.YFP.bGsplicepA.Neo} mouse ESC line ^c, Rosa26{LCA} mouse ESC line ^c, Rosa26{Nepn.Cherry} mouse ESC line ^c, Rosa26{Ngn3.Mafa} mouse ESC line ^c, Rosa26{Non-EN-CFP-Neo} mouse ESC line ^c, Rosa26{Pdx1.YFP} mouse ESC line ^c, Rosa26{R26-228-AR8-TA-mCherry} mouse ESC line ^c, Rosa26{R26-228-DR5-TA-Cerulean} mouse ESC line ^c, Rosa26{R26-228-IBRE4-TA-Cerulean} mouse ESC line ^c, Rosa26{R26-60-3XCNotch-TA-Cerulean} mouse ESC line ^c, Rosa26{R26-60-6XNotch-TA-Cerulean} mouse ESC line ^c, Rosa26{R26-60-AR8-TA-mCherry} mouse ESC line ^c, Rosa26{R26-60-DR5-TA-Cerulean} mouse ESC line ^c, Rosa26{R26-60-IBRE4-TA-Cerulean} mouse ESC line ^c, Rosa26{Setd5.GFP} mouse ESC line ^c, Rosa26{Sox9.Cherry} mouse ESC line ^c, Rosa26{TetO.NRSF} mouse ESC line ^c, Rosa26{mIre1.IG.Cherry} mouse ESC line ^c, Rosa26{mIre1.N906A.Cherry} mouse ESC line ^c, Rosa26{mIre1.WT.Cherry} mouse ESC line ^c, Rosa26{tm1(Ccnd1)} mouse ESC line ^c, Sox17{GFPCre} mouse ESC line ^c, Sox17{LCA} mouse ESC line ^c, Sst.rTTA.LCA mouse ESC line ^c

stem cell differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0048863

has super-classes: cell differentiation^c

stem cell division^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0017145

has super-classes: single-organism cellular process^c
has sub-classes: somatic stem cell division^c

stimulus or stress design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001396

has super-classes: intervention design^c; has part^op some study design independent variable^c and (is about^op some study intervention^c); has part^op some organism feature identification objective^c and (is about^op some response to stimulus^c)

STOCK Ipf1{tm1Cvw} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000182

has super-classes: mouse strain^c

STOCK Ipf1{tm2Cvw}/Mmnc mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000183

has super-classes: mouse strain^c

STOCK Pdx1{tm1Macd}/J mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000220

has super-classes: mouse strain^c

STOCK Ptf1a{tm1(cre)Cvw} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000184

has super-classes: mouse strain^c

STOCK Tg(Foxa3-cre)1Khk mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000185

has super-classes: mouse strain^c

STOCK Tg(Ipf1-cre/Esr1)1Dam/Mmcd mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000186

has super-classes: mouse strain^c

STOCK Tg(Neurog3-cre)1Dam/Mmcd mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000190

has super-classes: mouse strain^c

STOCK Tg(tetO-Pdx1,lacZ)958.1Macd mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000221

has super-classes: mouse strain^c

STOCK-Tg(Ipf1-cre)89.1Dam/Mmcd mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000189

has super-classes: mouse strain^c

stomach^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000945

has super-classes: subdivision of digestive tract^c; digestive system element^c

storage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302893

has super-classes: material maintenance^c; achieves_planned_objective^op some material maintenance objective^c; has_specified_input^op some material entity^c
has sub-classes: agar stab storage^c, freezing storage^c, lyophilization storage^c, paraffin storage^c

strain comparison design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001464

has super-classes: study design^c; has part^op some organism feature identification objective^c; has part^op some study design independent variable^c and (is about^op some selectively maintained organism^c)

stress and apoptosis in islets or beta cells^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000087

has super-classes: biological_process^c

striated^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001410

has super-classes: shape^c
has sub-classes: transversely striated^c

striated muscle cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000737

is equivalent to: muscle cell^c and (has part^op some sarcomere^c) and (bearer of^op some striated^c)
has super-classes: muscle cell^c; has part^op some sarcomere^c; bearer of^op some striated^c
has sub-classes: cardiac muscle cell^c

striated muscle tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002036

has super-classes: muscle tissue^c
has sub-classes: cardiac muscle tissue^c, skeletal muscle tissue^c

striatum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002435

has super-classes: gray matter of telencephalon^c

structural analysis by paired-end tag sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001849

has super-classes: DNA sequencing^c; has_specified_input^op some deoxyribonucleic acid^c and (has role^op some evaluant role^c); has_specified_output^op some DNA sequence data^c; has part^op some paired-end library preparation^c; has participant^op some DNA sequencer^c; achieves_planned_objective^op some sequence feature identification objective^c; has part^op some DNA sequencing^c

structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000141

has super-classes: morphology^c
has sub-classes: composition^c

structure with developmental contribution from neural crest^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0010314

has super-classes: anatomical structure^c
has sub-classes: Ammon's horn^c, adrenal/interrenal gland^c, calcareous tooth^c, cardiac muscle tissue^c, cerebellum^c, dermal skeletal element^c, gyrus^c, heart^c, hindbrain^c, lacrimal gland^c, lobe of cerebral hemisphere^c, medulla oblongata^c, midbrain^c, neural crest^c, neural crest-derived structure^c, olfactory bulb^c, parotid gland^c, pharyngeal arch artery^c, pituitary gland^c, pons^c, prefrontal cortex^c, spinal cord^c, submandibular gland^c, telencephalic ventricle^c, thyroid gland^c, tongue^c

study design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500000

has super-classes: plan specification^c; has part^op some protocol^c
has sub-classes: DNA methylation profiling by array design^c, DNA methylation profiling by high throughput sequencing design^c, RNA stability design^c, RNAi profiling by array design^c, all pairs design^c, array platform variation design^c, cell component comparison design^c, cell cycle design^c, cell differentiation design^c, cell type comparison design^c, cellular process design^c, clinical history design^c, clinical study design^c, comparative genome hybridization by array design^c, decision analysis study design^c, disease state design^c, dye swap design^c, environmental history design^c, ex vivo design^c, factorial design^c, family history design^c, genotyping design^c, hardware testing design^c, imprinting design^c, in vitro design^c, in vivo design^c, individual genetic characteristics comparison design^c, injury design^c, innate behavior design^c, intervention design^c, loop design^c, matched pairs design^c, normalization testing design^c, observation design^c, operator variation design^c, operon identification design^c, organism development design^c, organism part comparison design^c, organism status comparison design^c, parallel group design^c, pathogenicity design^c, protein binding site identification design^c, proteomic profiling by array design^c, protocol optimization design^c, quality control testing design^c, reference design^c, replicate design^c, self vs self design^c, sex comparison design^c, species comparison design^c, strain comparison design^c, systematic review study design^c, time series design^c, transcription profiling design^c, translation profiling design^c, translational bias design^c, validation by real time PCR design^c, validation by reverse transcription PCR design^c

study design controlled variable^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000785

has super-classes: directive information entity^c; part of^op some study design^c

study design dependent variable^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000751

has super-classes: directive information entity^c; part of^op some study design^c

study design execution^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000471

is equivalent to: planned process^c and (realizes^op some concretizes^op some study design^c)
has super-classes: planned process^c

study design independent variable^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000750

has super-classes: directive information entity^c; part of^op some study design^c

study intervention^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000931

has super-classes: planned process^c; part of^op some study design execution^c and (realizes^op some concretizes^op some intervention design^c); (has_specified_input^op some specimen^c) and (has_specified_output^op some specimen^c)

stuff accumulating cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000325

has super-classes: native cell^c
has sub-classes: fat cell^c, pigment cell^c

subcutaneous injection^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000954

is equivalent to: (realizes^op some material to be added role^c) and (realizes^op some function^c and (inheres in^op some syringe^c)) and (realizes^op some target of material addition role^c and (role of^op some hypodermis^c))
has super-classes: injection^c; administering substance in vivo^c; achieves_planned_objective^op some adding material objective^c

subdivision of digestive tract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0004921

has super-classes: subdivision of tube^c
has sub-classes: colon^c, digestive tract diverticulum^c, duodenum^c, ileum^c, intestine^c, large intestine^c, segment of colon^c, small intestine^c, stomach^c

subdivision of tube^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0013522

has super-classes: organ part^c
has sub-classes: subdivision of digestive tract^c, subdivision of uterine tube^c

subdivision of uterine tube^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0013515

has super-classes: reproductive structure^c; subdivision of tube^c
has sub-classes: uterus^c, vagina^c

submandibular gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001736

has super-classes: major salivary gland^c; endoderm-derived structure^c; structure with developmental contribution from neural crest^c

submitter^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0001741

has super-classes: investigation agent role^c

substance unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000006

has super-classes: measurement unit label^c
has sub-classes: attomole^c, femtomole^c, micromole^c, mole^c, nanomole^c, picomole^c

subthalamic nucleus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001906

has super-classes: nucleus of brain^c

sulfur molecular entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_26835

has super-classes: chalcogen molecular entity^c
has sub-classes: organosulfur compound^c, sulfur oxoacid derivative^c, sulfur oxoanion^c

sulfur oxoacid derivative^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33424

has super-classes: sulfur molecular entity^c; heteroatomic molecular entity^c
has sub-classes: organosulfonic acid^c

sulfur oxoanion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33482

has super-classes: sulfur molecular entity^c; oxoanion^c
has sub-classes: hydrogensulfite^c

superelliptic^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002318

has super-classes: 2-D shape^c
has sub-classes: elliptic^c

superior cervical ganglion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001989

has super-classes: paravertebral ganglion^c

surface structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003102

has super-classes: anatomical structure^c
has sub-classes: external nose^c, outer epithelium^c, skin epidermis^c, tooth-like structure^c

surgery^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ERO_0000378

has super-classes: planned process^c

SW480 cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CLO_0009218

has super-classes: immortal cell line cell^c

symbol^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000028

has super-classes: information content entity^c
has sub-classes: centrally registered identifier symbol^c
is in range of: has external identifier^op

sympathetic ganglion^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001806

has super-classes: autonomic ganglion^c; neural crest-derived structure^c
has sub-classes: paravertebral ganglion^c

synovial limb joint^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0011139

has super-classes: skeletal joint^c; limb joint^c
has sub-classes: knee joint^c

synthesizing function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000376

has super-classes: function^c

syringe^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000422

has super-classes: device^c; has function^op some transfer function^c

systematic review study design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001958

has super-classes: study design^c

T cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000084

is equivalent to: lymphocyte^c and (capable of^op some T cell mediated immunity^c)
has super-classes: lymphocyte^c; capable of^op some T cell mediated immunity^c; develops from^op some pro-T cell^c

T cell activation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0042110

has super-classes: lymphocyte activation^c; leukocyte aggregation^c
has sub-classes: T cell differentiation^c

T cell differentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0030217

has super-classes: lymphocyte differentiation^c; T cell activation^c

T cell mediated immunity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0002456

has super-classes: lymphocyte mediated immunity^c; adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains^c

T cell receptor complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0042101

has super-classes: receptor complex^c; plasma membrane part^c; adaptive immune receptor^c

T-cell acute lymphocytic leukemia protein 1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000016043

has super-classes: protein^c

T-cell surface glycoprotein CD5^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001839

has super-classes: protein^c

T-cell surface glycoprotein CD8 alpha chain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001084

has super-classes: protein^c

tandem mass spectrometer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001088

has super-classes: mass spectrometer^c

target of material addition^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_1110109

is equivalent to: has role^op some target of material addition role^c
has super-classes: material entity^c

target of material addition role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000444

has super-classes: role^c; inheres in^op some material entity^c; realized in^op only adding a material entity into a target^c

targets and roles of transcriptional regulators objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000081

has super-classes: molecular feature identification objective^c

taxonomic diversity assessment by targeted gene survey^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001960

has super-classes: sequencing assay^c; has_specified_output^op some sequence data^c and (is about^op some population^c); achieves_planned_objective^op some biodiversity assessment objective^c

technical replicate role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000249

has super-classes: reference subject role^c

telencephalic nucleus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0009663

has super-classes: nucleus of brain^c
has sub-classes: caudate nucleus^c, globus pallidus^c

telencephalic ventricle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002285

has super-classes: brain ventricle^c; structure with developmental contribution from neural crest^c

Teleostei^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_32443

has super-classes: Euteleostomi^c
has sub-classes: Danio rerio^c

telomerase_RNA_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001643

has super-classes: ncRNA_gene^c

temperature^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000146

has super-classes: physical quality^c
has sub-classes: frozen^c

temperature control bath^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400120

has super-classes: container^c; environmental control device^c; has function^op some contain function^c; has function^op some environment control function^c
has sub-classes: water bath^c

temperature unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000005

has super-classes: measurement unit label^c
has sub-classes: degree Celsius^c, degree Fahrenheit^c, kelvin^c

temporal region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000008

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: occurrent^c
has sub-classes: one-dimensional temporal region^c, zero-dimensional temporal region^c
is disjoint with: spatiotemporal region^c, process^c, process boundary^c

testis^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000473

has super-classes: gonad^c; reproductive organ^c

Tet-On/Ngn3 embryonic stem cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000108

has super-classes: embryonic stem cell line^c

textual entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000300

has super-classes: information content entity^c
has sub-classes: diagnosis textual entity^c, written name^c

Tg(Ins1-EGFP/GH1)14Hara mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000012

has super-classes: mouse strain^c

Tg(Ins1-mRFP)2Ggr mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000224

has super-classes: mouse strain^c

Tg(Neurog3-IRES-NLS-LacZ)1Ggr mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000223

has super-classes: mouse strain^c

Tg(Pdx1-Neurog3-ER)1Agb mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000199

has super-classes: mouse strain^c

Tg(RIP-Cre/ESR1){Ydor} mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000206

has super-classes: mouse strain^c

Tg(tetO-Ptf1a,lacZ)Macd mouse strain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_9000216

has super-classes: mouse strain^c

Theiler stage 1^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004393

has super-classes: mouse prenatal^c

Theiler stage 10^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004402

has super-classes: mouse prenatal^c

Theiler stage 11^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002582

has super-classes: mouse prenatal^c

Theiler stage 12^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004403

has super-classes: mouse prenatal^c

Theiler stage 13^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004404

has super-classes: mouse prenatal^c

Theiler stage 14^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004405

has super-classes: mouse prenatal^c

Theiler stage 15^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004406

has super-classes: mouse prenatal^c

Theiler stage 16^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004407

has super-classes: mouse prenatal^c

Theiler stage 17^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002583

has super-classes: mouse prenatal^c

Theiler stage 18^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004408

has super-classes: mouse prenatal^c

Theiler stage 19^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004409

has super-classes: mouse prenatal^c

Theiler stage 2^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004394

has super-classes: mouse prenatal^c

Theiler stage 20^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004410

has super-classes: mouse prenatal^c

Theiler stage 21^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002584

has super-classes: mouse prenatal^c

Theiler stage 22^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002585

has super-classes: mouse prenatal^c

Theiler stage 23^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004411

has super-classes: mouse prenatal^c

Theiler stage 24^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002586

has super-classes: mouse prenatal^c

Theiler stage 25^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004412

has super-classes: mouse prenatal^c

Theiler stage 26^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002587

has super-classes: mouse prenatal^c

Theiler stage 27^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004391

has super-classes: mouse postnatal^c

Theiler stage 28^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0002588

has super-classes: mouse postnatal^c

Theiler stage 3^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004395

has super-classes: mouse prenatal^c

Theiler stage 4^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004396

has super-classes: mouse prenatal^c

Theiler stage 5^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004397

has super-classes: mouse prenatal^c

Theiler stage 6^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004398

has super-classes: mouse prenatal^c

Theiler stage 7^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004399

has super-classes: mouse prenatal^c

Theiler stage 8^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004400

has super-classes: mouse prenatal^c

Theiler stage 9^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0004401

has super-classes: mouse prenatal^c

thermal cycler^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400116

has super-classes: container^c; environmental control device^c; has function^op some environment control function^c; has function^op some contain function^c
has sub-classes: PCR instrument^c

thiabicycloalkane^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_38297

has super-classes: organic heterobicyclic compound^c; organosulfur heterocyclic compound^c
has sub-classes: biotins^c

thoracic aorta^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001515

has super-classes: segment of aorta^c

thoracic segment organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005181

has super-classes: trunk region element^c
has sub-classes: diaphragm^c, heart^c, lung^c

three-dimensional spatial region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000028

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: spatial region^c
is disjoint with: two-dimensional spatial region^c, zero-dimensional spatial region^c, one-dimensional spatial region^c

Thy-1 membrane glycoprotein^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001843

has super-classes: protein^c

thymus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002370

has super-classes: mixed endoderm/mesoderm-derived structure^c; endocrine gland^c; gland^c; hemopoietic organ^c; immune organ^c

thyroid gland^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002046

has super-classes: endocrine gland^c; endoderm-derived structure^c; structure with developmental contribution from neural crest^c

tiling microarray^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001307

has super-classes: DNA microarray^c

time^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000165

has super-classes: physical quality^c
has sub-classes: age^c
is in range of: has duration^op

time measurement datum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000416

has super-classes: scalar measurement datum^c; (has measurement unit label^op only time unit^c) and (is duration of^op only process^c)
has sub-classes: age measurement datum^c, sampling time measurement datum^c
is in domain of: is duration of^op

time series design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0500020

has super-classes: study design^c

time unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000003

has super-classes: measurement unit label^c
has sub-classes: day^c, hour^c, microsecond^c, millisecond^c, minute^c, month^c, second^c, week^c, year^c

tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000479

has super-classes: multicellular anatomical structure^c
has sub-classes: connective tissue^c, embryonic tissue^c, epithelium^c, lymphomyeloid tissue^c, muscle tissue^c

tissue expression survey objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000082

has super-classes: biological feature identification objective^c

tissue specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001479

is equivalent to: (has role^op some specimen role^c) and (derives from^op some gross anatomical part^c)
has super-classes: specimen^c
has sub-classes: sample from organism^c, urine specimen^c

tongue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001723

has super-classes: sense organ^c; endoderm-derived structure^c; ectoderm-derived structure^c; structure with developmental contribution from neural crest^c; digestive system element^c

tonsil^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002372

has super-classes: endoderm-derived structure^c; lymphomyeloid tissue^c

tooth-like structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003913

has super-classes: surface structure^c; skeletal element^c
has sub-classes: calcareous tooth^c

total intensity transformation paired^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200027

has super-classes: normalization data transformation^c; achieves_planned_objective^op some data normalization objective^c

total intensity transformation single^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200026

has super-classes: normalization data transformation^c; achieves_planned_objective^op some data normalization objective^c

total RNA extract^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000895

has super-classes: RNA extract^c; is_specified_output_of^op some total RNA extraction^c

total RNA extraction^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000855

has super-classes: RNA extraction^c

trachea^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003126

has super-classes: respiratory tube^c

tracheobronchial tree^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0007196

has super-classes: organ^c; endoderm-derived structure^c

transcript^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000673

has super-classes: gene_member_region^c
has sub-classes: ncRNA^c

transcript analysis by paired-end tag sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001850

has super-classes: transcription profiling assay^c; sequencing assay^c; achieves_planned_objective^op some transcription profiling identification objective^c; has part^op some RNA sequencing^c; has_specified_input^op some ribonucleic acid^c and (has role^op some evaluant role^c); has participant^op some DNA sequencer^c; has part^op some paired-end library preparation^c; has_specified_output^op some DNA sequence data^c

transcript leader sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002034

has super-classes: RNA-seq assay^c

transcription factor binding site^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000794

PLace_holder for sequence ontology term

has super-classes: sequence feature annotation^c

transcription factor binding site identification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000291

is equivalent to: has_specified_output^op some information content entity^c and (is about^op some transcription factor binding site^c); assay^c and (has_specified_output^op some information content entity^c and (is about^op some transcription factor binding site^c))
has super-classes: binding assay^c; has_specified_output^op some measurement datum^c and ((is about^op some gene expression^c) and (is about^op some sequence-specific DNA binding^c))
has sub-classes: transcription factor binding site identification by ChIP-Seq assay^c, transcription factor binding site identification by ChIP-chip assay^c, transcription factor binding site identification by SACO assay^c

transcription factor binding site identification by ChIP-chip assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002018

has super-classes: transcription factor binding site identification^c; ChIP-chip assay^c; has_specified_output^op some information content entity^c and (is about^op some transcription factor binding site^c); achieves_planned_objective^op some protein and DNA interaction identification objective^c

transcription factor binding site identification by ChIP-Seq assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002019

has super-classes: transcription factor binding site identification^c; ChIP-seq assay^c; has_specified_output^op some information content entity^c and (is about^op some transcription factor binding site^c); achieves_planned_objective^op some protein and DNA interaction identification objective^c

transcription factor binding site identification by SACO assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000088

has super-classes: transcription factor binding site identification^c; assay using chromatin immunoprecipitation^c; achieves_planned_objective^op some protein and DNA interaction identification objective^c; has_specified_output^op some information content entity^c and (is about^op some transcription factor binding site^c); has part^op some immunoprecipitation^c; has_specified_output^op some information content entity^c

transcription factor MafA^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000010047

has super-classes: protein^c

transcription factor PU.1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001944

has super-classes: protein^c

transcription factor SOX-17^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000015424

has super-classes: protein^c

transcription profiling assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000424

is equivalent to: assay^c and (achieves_planned_objective^op some transcription profiling identification objective^c)
has super-classes: analyte assay^c; realizes^op some analyte role^c and (role of^op some ribonucleic acid^c); has_specified_output^op some measurement datum^c and (is about^op some gene expression^c); has_specified_input^op some specimen^c and (has part^op some ribonucleic acid^c)
has sub-classes: RNA Annotation and Mapping of Promoters for the Analysis of Gene Expression assay^c, RNA-seq assay^c, cap analysis of gene expression ^c, microRNA profiling assay^c, transcript analysis by paired-end tag sequencing^c, transcription profiling by MPSS assay^c, transcription profiling by RT-PCR assay^c, transcription profiling by array assay^c, transcription profiling by tiling array assay^c, transcriptional profiling by MARIS assay^c

transcription profiling by array assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001463

has super-classes: transcription profiling assay^c; has_specified_input^op some specimen^c and (has part^op some ribonucleic acid^c); realizes^op some analyte role^c and (role of^op some ribonucleic acid^c); has participant^op some DNA microarray^c; achieves_planned_objective^op some transcription profiling identification objective^c; has_specified_output^op some measurement datum^c and (is about^op some gene expression^c)

transcription profiling by array design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001290

has super-classes: transcription profiling design^c; has part^op some transcription profiling identification objective^c; is concretized as^op some realized in^op some (has part^op some transcription profiling by array assay^c) and (has participant^op some DNA microarray^c)

transcription profiling by high throughput sequencing design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001239

has super-classes: transcription profiling design^c; has part^op some transcription profiling identification objective^c; is concretized as^op some realized in^op some (has part^op some RNA-seq assay^c) and (has participant^op some DNA sequencer^c)

transcription profiling by MPSS assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002015

has super-classes: transcription profiling assay^c; achieves_planned_objective^op some transcription profiling identification objective^c; has part^op some library preparation^c; has part^op some DNA sequencing^c; has participant^op some assay bead^c; has_specified_output^op some information content entity^c and (is about^op some gene expression^c)

transcription profiling by RT-PCR assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001361

has super-classes: transcription profiling assay^c; realizes^op some analyte role^c and (role of^op some ribonucleic acid^c); has_specified_input^op some specimen^c and (has part^op some ribonucleic acid^c); has_specified_output^op some measurement datum^c and (is about^op some gene expression^c); has participant^op some PCR instrument^c; has part^op some reverse transcribed polymerase chain reaction^c; achieves_planned_objective^op some transcription profiling identification objective^c

transcription profiling by RT-PCR design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001313

has super-classes: transcription profiling design^c; is concretized as^op some realized in^op some (has part^op some transcription profiling by RT-PCR assay^c) and (has participant^op some PCR instrument^c); has part^op some transcription profiling identification objective^c

transcription profiling by tiling array assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001235

has super-classes: transcription profiling assay^c; has participant^op some tiling microarray^c; realizes^op some analyte role^c and (role of^op some ribonucleic acid^c); has_specified_input^op some specimen^c and (has part^op some ribonucleic acid^c); achieves_planned_objective^op some transcription profiling identification objective^c; has_specified_output^op some measurement datum^c and (is about^op some gene expression^c)

transcription profiling by tiling array design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001427

has super-classes: transcription profiling design^c; has part^op some transcription profiling identification objective^c; is concretized as^op some realized in^op some (has part^op some transcription profiling by tiling array assay^c) and (has participant^op some tiling microarray^c)

transcription profiling design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001430

is equivalent to: (has part^op some transcription profiling identification objective^c) and (is concretized as^op some realized in^op some has part^op some transcription profiling assay^c)
has super-classes: study design^c
has sub-classes: microRNA profiling by array design^c, transcription profiling by RT-PCR design^c, transcription profiling by array design^c, transcription profiling by high throughput sequencing design^c, transcription profiling by tiling array design^c

transcription profiling identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001331

has super-classes: molecular feature identification objective^c
has sub-classes: transcription start site identification objective^c

transcription start site identification objective^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001851

has super-classes: transcription profiling identification objective^c

transcriptional profiling by MARIS assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BCGO_0000089

has super-classes: transcription profiling assay^c; has_specified_output^op some information content entity^c and (is about^op some gene expression^c); achieves_planned_objective^op some transcription profiling identification objective^c; has_specified_output^op some measurement datum^c; has participant^op some flow cytometer sorter^c

transdifferentiation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0060290

has super-classes: cell differentiation^c

transfection^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001152

has super-classes: genetic transformation^c; has_specified_input^op some (deoxyribonucleic acid^c or ribonucleic acid^c) and (bearer of^op some target of material addition role^c); has part^op some cell permeabilization^c

transfer function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000383

has super-classes: function^c

transferrin receptor protein 1^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001945

has super-classes: protein^c

transgene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0000902

has super-classes: gene^c

translation profiling assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001282

has super-classes: analyte assay^c; realizes^op some analyte role^c and (role of^op some ribonucleic acid^c); achieves_planned_objective^op some molecular feature identification objective^c

translation profiling design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001410

has super-classes: study design^c; has part^op some molecular feature identification objective^c; is concretized as^op some realized in^op some has part^op some translation profiling assay^c

translation-associated transcript leader sequencing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0002033

has super-classes: RNA-seq assay^c

translational bias design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001259

has super-classes: study design^c; has part^op some biological feature identification objective^c

transport^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0006810

has super-classes: establishment of localization^c
has sub-classes: nitrogen compound transport^c, organic substance transport^c, single-organism transport^c

transversely striated^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002478

has super-classes: striated^c

treatment^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OGMS_0000090

has super-classes: planned process^c

tRNA_gene^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001272

has super-classes: ncRNA_gene^c

trunk region element^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0005177

has super-classes: organ^c
has sub-classes: abdomen element^c, thoracic segment organ^c, viscus^c

tube^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000025

has super-classes: anatomical conduit^c
has sub-classes: duct^c, epithelial tube^c, fallopian tube^c, respiratory tube^c

tumor grading^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600002

has super-classes: assay^c; achieves_planned_objective^op some assay objective^c; has_specified_input^op some specimen^c; has_specified_output^op some measurement datum^c and (is about^op some disease course^c)

tumor necrosis factor ligand superfamily member 5^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001950

has super-classes: protein^c

two-dimensional continuant fiat boundary^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000146

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: continuant fiat boundary^c
is disjoint with: one-dimensional continuant fiat boundary^c, zero-dimensional continuant fiat boundary^c

two-dimensional spatial region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000009

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: spatial region^c
is disjoint with: zero-dimensional spatial region^c, one-dimensional spatial region^c, three-dimensional spatial region^c

type A enterocrine cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0002067

is equivalent to: enteroendocrine cell^c and (capable of^op some glucagon secretion^c)
has super-classes: enteroendocrine cell^c; glucagon secreting cell^c; capable of^op some glucagon secretion^c
has sub-classes: pancreatic A cell^c

type B pancreatic cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000169

Pancreatic beta cells are also reportedly CD284-positive. Upon activation, they upregulate their CD14 expression.

is equivalent to: enteroendocrine cell^c and (part of^op some islet of Langerhans^c) and (capable of^op some insulin secretion^c)
has super-classes: epithelial cell of pancreas^c; enteroendocrine cell^c; insulin secreting cell^c; pancreatic endocrine cell^c; develops from^op some progenitor cell of endocrine pancreas^c; part of^op some islet of Langerhans^c; capable of^op some insulin secretion^c
has sub-classes: insulin-expressing immature beta cell^c, insulin-expressing mature beta cell^c

type B pancreatic cell proliferation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044342

has super-classes: single-organism process^c

type D enteroendocrine cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000502

has super-classes: enteroendocrine cell^c; somatostatin secreting cell^c; capable of^op some somatostatin secretion^c
has sub-classes: pancreatic D cell^c

type I diabetes mellitus^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0001359

has super-classes: disease^c; diabetes mellitus^c

type II diabetes mellitus^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/efo/EFO_0001360

has super-classes: diabetes mellitus^c

umbilical cord^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002331

has super-classes: extraembryonic structure^c; mesoderm-derived structure^c

umbilical vein^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002066

has super-classes: vein^c; blood vessel^c

unilaminar epithelium^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000490

has super-classes: epithelium^c
has sub-classes: endoderm of foregut^c, simple columnar epithelium^c, simple squamous epithelium^c

unipotent^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001400

Unipotent cells have the quality of self-renewal which distinguishes them from non-stem cells.

has super-classes: cellular potency^c

unit of molarity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000061

has super-classes: concentration unit^c
has sub-classes: micromolar^c, millimolar^c, molar^c, picomolar^c

upper respiratory conduit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0015787

has super-classes: anatomical conduit^c; endoderm-derived structure^c
has sub-classes: pharyngeal arch artery^c

urinary bladder^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001255

has super-classes: viscus^c; mesoderm-derived structure^c; bladder organ^c

urine^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001088

has super-classes: organism substance^c

urine specimen^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000651

has super-classes: tissue specimen^c; has role^op some specimen role^c; is_specified_output_of^op some collecting specimen from organism^c; derives from^op some urine^c

urokinase plasminogen activator surface receptor^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000001969

has super-classes: protein^c

uterine cervix^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000002

has super-classes: organ part^c; reproductive structure^c

uterus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000995

has super-classes: subdivision of uterine tube^c

vacuole^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0005773

has super-classes: intracellular membrane-bounded organelle^c; cytoplasmic part^c
has sub-classes: azurophil granule^c

vagina^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000996

has super-classes: subdivision of uterine tube^c

validation by real time PCR design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001166

has super-classes: study design^c; has part^op some assay validation objective^c and (objective_achieved_by^op some real time polymerase chain reaction assay^c)

validation by reverse transcription PCR design^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001162

has super-classes: study design^c; has part^op some assay validation objective^c and (objective_achieved_by^op some reverse transcription polymerase chain reaction assay^c)

value specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001933

has super-classes: information content entity^c
has sub-classes: scalar value specification^c
is in domain of: has specified value^dp
is in range of: has value specification^op

vascular endothelial growth factor receptor 2^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000002112

has super-classes: protein^c

vector mediated amplification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0600048

has super-classes: recombinant vector cloning^c

vein^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001638

has super-classes: blood vessel^c
has sub-classes: umbilical vein^c

ventral pancreatic bud^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0003924

has super-classes: pancreatic epithelial bud^c

ventral pancreatic duct^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001064

has super-classes: pancreatic duct^c

ventral tegmental area^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002691

has super-classes: regional part of brain^c

vermiform appendix^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001154

has super-classes: digestive system element^c

Vertebrata <Metazoa>^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_7742

has super-classes: Eukaryota^c
has sub-classes: Gnathostomata <vertebrate>^c

vesicle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0031982

has super-classes: organelle^c
has sub-classes: cytoplasmic vesicle^c, membrane-bounded vesicle^c

viability^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000169

has super-classes: organismal quality^c
has sub-classes: alive^c, dead^c

Viruses^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_10239

has super-classes: organism^c

viscus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002075

has super-classes: trunk region element^c
has sub-classes: abdominal viscera^c, pancreas^c, urinary bladder^c

volume per unit volume^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000205

has super-classes: concentration unit^c
has sub-classes: milliliter per liter^c, volume percentage^c

volume percentage^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000165

has super-classes: percent^c; volume per unit volume^c

volume unit^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000095

has super-classes: measurement unit label^c
has sub-classes: cubic centimeter^c, deciliter^c, femtoliter^c, liter^c, microliter^c, milliliter^c, nanoliter^c, picoliter^c

vomeronasal organ^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0002255

has super-classes: sense organ^c; ectoderm-derived structure^c

vortexer^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400118

has super-classes: perturbation device^c; has function^op some perturb function^c

waiting^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000045

has super-classes: exposure of material to environment^c

washing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0302888

has super-classes: material processing^c; has_specified_output^op some material entity^c; achieves_planned_objective^op some material transformation objective^c; has_specified_input^op some material entity^c

water bath^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0400155

has super-classes: temperature control bath^c

week^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000034

has super-classes: time unit^c

white adipose tissue^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001347

has super-classes: adipose tissue^c

white fat cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000448

has super-classes: fat cell^c; develops from^op some preadipocyte^c; part of^op some white adipose tissue^c

whole organism preparation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000680

has super-classes: specimen^c; derives from^op some organism^c; is_specified_output_of^op some specimen collection process^c; material entity^c and (has role^op some specimen role^c)

wild type allele information^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001369

has super-classes: allele information^c

wild type organism genotype information^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0001294

has super-classes: genotype information^c

worker role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000116

has super-classes: investigation agent role^c

written name^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000590

has super-classes: textual entity^c
is in domain of: first name^dp, has last name^dp

YAC_end^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/SO_0001498

has super-classes: read^c

year^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UO_0000036

has super-classes: time unit^c

yeast mating type^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001337

has super-classes: mating type^c
has sub-classes: Saccharomyces cerevisiae mating type^c, Schizosaccharomyces pombe mating type^c

yolk sac^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001040

has super-classes: mixed endoderm/mesoderm-derived structure^c; extraembryonic membrane^c

zero-dimensional continuant fiat boundary^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000147

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: continuant fiat boundary^c
is disjoint with: one-dimensional continuant fiat boundary^c, two-dimensional continuant fiat boundary^c

zero-dimensional spatial region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000018

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: spatial region^c
is disjoint with: two-dimensional spatial region^c, one-dimensional spatial region^c, three-dimensional spatial region^c

zero-dimensional temporal region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000148

is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: temporal region^c
is disjoint with: one-dimensional temporal region^c

zone of skin^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000014

has super-classes: organ part^c; ectoderm-derived structure^c

zymogen granule membrane^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0042589

has super-classes: secretory granule membrane^c

This HTML document was obtained by processing the OWL ontology source code through LODE, Live OWL Documentation Environment, developed by Silvio Peroni.

Abstract

Table of Content

Classes

129X1/SvJ mouse strainc back to ToC or Class ToC

2'-deoxyribonucleosidec back to ToC or Class ToC

2-D shapec back to ToC or Class ToC

2x2 factorial designc back to ToC or Class ToC

3-D shapec back to ToC or Class ToC

3T3-L1 cellc back to ToC or Class ToC

454 Genome Sequence 20c back to ToC or Class ToC

454 Genome Sequencer FLXc back to ToC or Class ToC

5'-nucleotidasec back to ToC or Class ToC

5-bromo-2'-deoxyuridinec back to ToC or Class ToC

a mating type (yeast)c back to ToC or Class ToC

AB SOLiD Systemc back to ToC or Class ToC

abdomen elementc back to ToC or Class ToC

abdominal aortac back to ToC or Class ToC

abdominal viscerac back to ToC or Class ToC

ABI 377 automated sequencerc back to ToC or Class ToC

acclimatizationc back to ToC or Class ToC

acidophilic cytoplasmc back to ToC or Class ToC

acinar cellc back to ToC or Class ToC

action specificationc back to ToC or Class ToC

activity (of a radionuclide) unitc back to ToC or Class ToC

acute lymphoblastic leukemiac back to ToC or Class ToC

acute myeloid leukemiac back to ToC or Class ToC

acute promyelocytic leukemiac back to ToC or Class ToC

adaptive immune receptorc back to ToC or Class ToC

adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domainsc back to ToC or Class ToC

adding a material entity into a targetc back to ToC or Class ToC

adding material objectivec back to ToC or Class ToC

addition of molecular labelc back to ToC or Class ToC

adipose tissuec back to ToC or Class ToC

administering substance in vivoc back to ToC or Class ToC

administration of material to specimenc back to ToC or Class ToC

ADP-ribosyl cyclase 1c back to ToC or Class ToC

adrenal cortexc back to ToC or Class ToC

adrenal glandc back to ToC or Class ToC

adrenal/interrenal glandc back to ToC or Class ToC

affinityc back to ToC or Class ToC

agar stab specimenc back to ToC or Class ToC

agar stab storagec back to ToC or Class ToC

agarosec back to ToC or Class ToC

agec back to ToC or Class ToC

age datumc back to ToC or Class ToC

age measurement assayc back to ToC or Class ToC

age measurement datumc back to ToC or Class ToC

age since birth measurement datumc back to ToC or Class ToC

age since coitus measurement datumc back to ToC or Class ToC

age since eclosion measurement datumc back to ToC or Class ToC

age since egg laying measurement datumc back to ToC or Class ToC

age since fertilization measurement datumc back to ToC or Class ToC

age since germination measurement datumc back to ToC or Class ToC

age since hatching measurement datumc back to ToC or Class ToC

age since planting measurement datumc back to ToC or Class ToC

age since sowing measurement datumc back to ToC or Class ToC

Ainv15 cellc back to ToC or Class ToC

Alexa Fluor 532c back to ToC or Class ToC

Alexa Fluor 546c back to ToC or Class ToC

algorithmc back to ToC or Class ToC

alivec back to ToC or Class ToC

all pairs designc back to ToC or Class ToC

allele informationc back to ToC or Class ToC

alpha mating type (yeast)c back to ToC or Class ToC

alpha-(1,3)-fucosyltransferase FUT4c back to ToC or Class ToC

ameboidal-type cell migrationc back to ToC or Class ToC

amide transportc back to ToC or Class ToC

Ammon's hornc back to ToC or Class ToC

ammonium transportc back to ToC or Class ToC

Amniotac back to ToC or Class ToC

amplified DNAc back to ToC or Class ToC

amygdalac back to ToC or Class ToC

analyte assayc back to ToC or Class ToC

analyte measurement objectivec back to ToC or Class ToC

analyte rolec back to ToC or Class ToC

anatomical clusterc back to ToC or Class ToC

anatomical conduitc back to ToC or Class ToC

anatomical entityc back to ToC or Class ToC

anatomical structurec back to ToC or Class ToC

anatomical structure developmentc back to ToC or Class ToC

129X1/SvJ mouse strain^c back to ToC or Class ToC

2'-deoxyribonucleoside^c back to ToC or Class ToC

2-D shape^c back to ToC or Class ToC

2x2 factorial design^c back to ToC or Class ToC

3-D shape^c back to ToC or Class ToC

3T3-L1 cell^c back to ToC or Class ToC

454 Genome Sequence 20^c back to ToC or Class ToC

454 Genome Sequencer FLX^c back to ToC or Class ToC

5'-nucleotidase^c back to ToC or Class ToC

5-bromo-2'-deoxyuridine^c back to ToC or Class ToC

a mating type (yeast)^c back to ToC or Class ToC

AB SOLiD System^c back to ToC or Class ToC

abdomen element^c back to ToC or Class ToC

abdominal aorta^c back to ToC or Class ToC

abdominal viscera^c back to ToC or Class ToC

ABI 377 automated sequencer^c back to ToC or Class ToC

acclimatization^c back to ToC or Class ToC

acidophilic cytoplasm^c back to ToC or Class ToC

acinar cell^c back to ToC or Class ToC

action specification^c back to ToC or Class ToC

activity (of a radionuclide) unit^c back to ToC or Class ToC

acute lymphoblastic leukemia^c back to ToC or Class ToC

acute myeloid leukemia^c back to ToC or Class ToC

acute promyelocytic leukemia^c back to ToC or Class ToC

adaptive immune receptor^c back to ToC or Class ToC

adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains^c back to ToC or Class ToC

adding a material entity into a target^c back to ToC or Class ToC

adding material objective^c back to ToC or Class ToC

addition of molecular label^c back to ToC or Class ToC

adipose tissue^c back to ToC or Class ToC

administering substance in vivo^c back to ToC or Class ToC

administration of material to specimen^c back to ToC or Class ToC

ADP-ribosyl cyclase 1^c back to ToC or Class ToC

adrenal cortex^c back to ToC or Class ToC

adrenal gland^c back to ToC or Class ToC

adrenal/interrenal gland^c back to ToC or Class ToC

affinity^c back to ToC or Class ToC

agar stab specimen^c back to ToC or Class ToC

agar stab storage^c back to ToC or Class ToC

agarose^c back to ToC or Class ToC

age^c back to ToC or Class ToC

age datum^c back to ToC or Class ToC

age measurement assay^c back to ToC or Class ToC

age measurement datum^c back to ToC or Class ToC

age since birth measurement datum^c back to ToC or Class ToC

age since coitus measurement datum^c back to ToC or Class ToC

age since eclosion measurement datum^c back to ToC or Class ToC

age since egg laying measurement datum^c back to ToC or Class ToC

age since fertilization measurement datum^c back to ToC or Class ToC

age since germination measurement datum^c back to ToC or Class ToC

age since hatching measurement datum^c back to ToC or Class ToC

age since planting measurement datum^c back to ToC or Class ToC

age since sowing measurement datum^c back to ToC or Class ToC

Ainv15 cell^c back to ToC or Class ToC

Alexa Fluor 532^c back to ToC or Class ToC

Alexa Fluor 546^c back to ToC or Class ToC

algorithm^c back to ToC or Class ToC

alive^c back to ToC or Class ToC

all pairs design^c back to ToC or Class ToC

allele information^c back to ToC or Class ToC

alpha mating type (yeast)^c back to ToC or Class ToC

alpha-(1,3)-fucosyltransferase FUT4^c back to ToC or Class ToC

ameboidal-type cell migration^c back to ToC or Class ToC

amide transport^c back to ToC or Class ToC

Ammon's horn^c back to ToC or Class ToC

ammonium transport^c back to ToC or Class ToC

Amniota^c back to ToC or Class ToC

amplified DNA^c back to ToC or Class ToC

amygdala^c back to ToC or Class ToC

analyte assay^c back to ToC or Class ToC

analyte measurement objective^c back to ToC or Class ToC

analyte role^c back to ToC or Class ToC

anatomical cluster^c back to ToC or Class ToC

anatomical conduit^c back to ToC or Class ToC

anatomical entity^c back to ToC or Class ToC

anatomical structure^c back to ToC or Class ToC

anatomical structure development^c back to ToC or Class ToC

aneuploid^c back to ToC or Class ToC

angioblastic mesenchymal cell^c back to ToC or Class ToC

animal cell^c back to ToC or Class ToC