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Biological Spatial Ontology

Metadata

URI
http://purl.obolibrary.org/obo/bspo.owl
Version Information
2021-10-13
Version URI
http://purl.obolibrary.org/obo/bspo/releases/2021-10-13/bspo.owl
License
https://creativecommons.org/licenses/by/3.0/
Ontology RDF
RDF (turtle)

Description

based on FBql

Table of Contents

  1. Classes
  2. Object Properties
  3. Annotation Properties
  4. Named Individuals
  5. Namespaces
  6. Legend

Overview

Pictures say 1,000 words
Figure 1: Ontology overview

Classes

continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000002
Restrictions obo:BFO_0000050op only obo:BFO_0000002c
Sub-classes obo:BFO_0000020c
obo:BFO_0000004c
In domain of obo:RO_0002506op
obo:RO_0000056op
obo:RO_0002566op
In range of obo:RO_0002506op
obo:RO_0000057op
obo:RO_0002566op

occurrentc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000003
Restrictions obo:BFO_0000050op only obo:BFO_0000003c
Sub-classes obo:BFO_0000015c
In domain of obo:BFO_0000063op
obo:RO_0002222op
obo:RO_0000057op
obo:BFO_0000062op
obo:RO_0002501op
In range of obo:RO_0002222op
obo:RO_0000056op
obo:BFO_0000062op
obo:RO_0002501op
obo:BFO_0000063op

independent continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000004
Super-classes obo:BFO_0000002c
Restrictions obo:BFO_0000050op only obo:BFO_0000004c
Sub-classes obo:CARO_0030000c
obo:BFO_0000040c
obo:BFO_0000141c
In domain of obo:RO_0000087op
obo:RO_0002220op
obo:RO_0000085op
obo:RO_0002215op
obo:RO_0000091op
In range of obo:RO_0002220op

processc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000015
Super-classes obo:BFO_0000003c
Sub-classes obo:GO_0003674c
obo:GO_0008150c
In domain of obo:RO_0002334op
obo:RO_0002233op
obo:RO_0002018op
obo:RO_0002211op
In range of obo:RO_0002018op
obo:RO_0002215op
obo:RO_0002211op
obo:RO_0002595op
obo:RO_0002334op

dispositionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000016
Super-classes obo:BFO_0000017c
Sub-classes obo:BFO_0000034c
In range of obo:RO_0000091op

realizable entityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000017
Super-classes obo:BFO_0000020c
Restrictions obo:BFO_0000050op only obo:BFO_0000017c
Sub-classes obo:BFO_0000016c
obo:BFO_0000023c

qualityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000019
Super-classes obo:BFO_0000020c
Restrictions obo:BFO_0000050op only obo:BFO_0000019c
In range of obo:RO_0000086op

specifically dependent continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000020
Super-classes obo:BFO_0000002c
Restrictions obo:BFO_0000050op only obo:BFO_0000020c
Sub-classes obo:BFO_0000019c
obo:BFO_0000017c
In range of obo:RO_0000053op

rolec # Classes

URI http://purl.obolibrary.org/obo/BFO_0000023
Super-classes obo:BFO_0000017c
In range of obo:RO_0000087op

BFO_0000031c # Classes

URI http://purl.obolibrary.org/obo/BFO_0000031
Sub-classes obo:IAO_0000030c

functionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000034
Super-classes obo:BFO_0000016c
In domain of obo:RO_0000079op
In range of obo:RO_0000085op

material entityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000040
Super-classes obo:BFO_0000004c
Sub-classes obo:CARO_0000006c
In domain of obo:RO_0002448op
obo:RO_0002449op
obo:RO_0002595op
obo:RO_0002434op
obo:RO_0011002op
obo:RO_0002450op
In range of obo:RO_0002448op
obo:RO_0002449op
obo:RO_0002434op
obo:RO_0011002op
obo:RO_0002450op

immaterial entityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000141
Super-classes obo:BFO_0000004c
Sub-classes obo:CARO_0000007c

left sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000000
Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015007op some obo:BSPO_0000017c
obo:BSPO_0000110op some obo:BSPO_0000007c

upper sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000001
Description

Consider merging with superior side.

Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015007op some obo:BSPO_0000011c

lower sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000002
Description

Consider merging with inferior side.

Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015001op some obo:BSPO_0000011c

deep-superficial gradient (obsolete)c # Classes

URI http://purl.obolibrary.org/obo/BSPO_00000021
Description

was made obsolete because the ID had too many digits

deep sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000003
Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0000107op some obo:BSPO_0000004c
obo:BSPO_0015007op some obo:BSPO_0000012c

superficial sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000004
Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015001op some obo:BSPO_0000012c

anatomical surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000005
Description

to be merged into CARO

Super-classes obo:CARO_0000010c
Sub-classes obo:BSPO_0000379c
obo:BSPO_0000371c
obo:BSPO_0000374c
obo:BSPO_0000383c
obo:BSPO_0000382c
obo:BSPO_0000381c
obo:BSPO_0000376c
obo:BSPO_0000378c
obo:BSPO_0000384c
obo:BSPO_0000372c
obo:BSPO_0000377c
obo:BSPO_0000373c
In domain of obo:BSPO_0015008op

anatomical marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000006
Super-classes obo:BSPO_0000070c
Sub-classes obo:BSPO_0000678c
obo:BSPO_0000683c
obo:BSPO_0000677c
obo:BSPO_0000684c
obo:BSPO_0000671c
obo:BSPO_0000673c
obo:BSPO_0000672c
obo:BSPO_0000679c
obo:BSPO_0000682c
obo:BSPO_0000674c

right sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000007
Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015001op some obo:BSPO_0000017c

parasagittal planec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000008
Super-classes obo:BSPO_0000417c

midsagittal planec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000009
Description

only in bilaterally symmetrical organisms

Super-classes obo:BSPO_0000417c

anatomical axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000010
Description

Axis directions are defined in terms of axes.

Super-classes obo:CARO_0000008c
Restrictions obo:BSPO_0015006op some obo:CARO_0000000c
Sub-classes obo:BSPO_0000014c
obo:BSPO_0000195c
obo:BSPO_0000013c
obo:BSPO_0000016c
obo:BSPO_0000015c
obo:BSPO_0000198c
obo:BSPO_0000012c
obo:BSPO_0000200c
obo:BSPO_0000196c
obo:BSPO_0000199c
obo:BSPO_0000011c
obo:BSPO_0000417c
obo:BSPO_0000017c
In domain of obo:BSPO_0015005op
obo:BSPO_0015006op
http://purl.obolibrary.org/obo/#_has_start_pointop
obo:BSPO_0000104op
obo:BSPO_0015004op
In range of obo:BSPO_0015007op
obo:BSPO_0015001op
obo:BSPO_0015002op
obo:BSPO_0000104op

upper-lower axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000011
Super-classes obo:BSPO_0000010c

deep-superficial axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000012
Description

Muscles are frequently categorized as 'deep', 'intermediate', and 'superficial'.

Super-classes obo:BSPO_0000010c

anterior-posterior axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000013
Description

In sponges, AP is used to indicate the direction of movement [in larval stage] (as it is in other metazoans that move, e.g., the basal bilaterians). [PM]

Super-classes obo:BSPO_0000010c
Restrictions obo:BSPO_0015005op some obo:BSPO_0000018c
obo:BSPO_0000104op some obo:BSPO_0000016c

apical-basal axis relative to substratec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000014
Super-classes obo:BSPO_0000010c

proximal-distal axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000015
Description

In some communities, proximal and distal are used when specifying the position of parts of elements that are contained within the body, such as gill arches or vertebral spines. In these cases, use of the classes medial-lateral axis or medial-external axis are more appropriate.

Super-classes obo:BSPO_0000010c

dorsal-ventral axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000016
Super-classes obo:BSPO_0000010c
Restrictions obo:BSPO_0015005op some obo:BSPO_0000019c

left-right axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000017
Super-classes obo:BSPO_0000010c
Restrictions obo:BSPO_0015005op some obo:BSPO_0000417c

transverse planec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000018
Super-classes obo:BSPO_0000400c

horizontal planec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000019
Super-classes obo:BSPO_0000400c

upper-lower gradientc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000020
Super-classes obo:BSPO_0000051c
Restrictions obo:BSPO_0015002op some obo:BSPO_0000011c

deep-superficial gradientc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000021
Super-classes obo:BSPO_0000051c
Restrictions obo:BSPO_0015002op some obo:BSPO_0000012c

superior sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000022
Super-classes obo:BSPO_0000054c

apical-basal gradientc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000023
Super-classes obo:BSPO_0000051c
Restrictions obo:BSPO_0015002op some obo:BSPO_0000014c

proximal-distal gradientc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000024
Super-classes obo:BSPO_0000051c
Restrictions obo:BSPO_0015002op some obo:BSPO_0000015c

inferior sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000025
Super-classes obo:BSPO_0000054c

antero-dorsal regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000026
Super-classes obo:BSPO_0000071c
obo:BSPO_0000079c
Sub-classes obo:BSPO_0000686c

antero-ventral regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000027
Super-classes obo:BSPO_0000071c
obo:BSPO_0000084c
Sub-classes obo:BSPO_0000688c

postero-lateral regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000028
Super-classes obo:BSPO_0000082c
obo:BSPO_0000072c
Sub-classes obo:BSPO_0000047c

antero-lateral regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000029
Super-classes obo:BSPO_0000082c
obo:BSPO_0000071c
Sub-classes obo:BSPO_0000045c

postero-dorsal regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000030
Super-classes obo:BSPO_0000072c
obo:BSPO_0000079c
Sub-classes obo:BSPO_0000687c

upper regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000031
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000001c

lower regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000032
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000002c

deep regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000033
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000003c

superficial regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000034
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000004c

postero-ventral regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000035
Super-classes obo:BSPO_0000072c
obo:BSPO_0000084c
Sub-classes obo:BSPO_0000689c

anterior-most regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000036
Super-classes obo:BSPO_0000071c

posterior-most regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000037
Super-classes obo:BSPO_0000072c

dorsal-most regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000038
Super-classes obo:BSPO_0000079c

ventral-most regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000039
Super-classes obo:BSPO_0000084c

upper/lower compartment boundaryc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000040
Super-classes obo:BSPO_0000092c
Restrictions obo:BSPO_0015003op some obo:BSPO_0000011c

deep/superficial compartment boundaryc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000041
Super-classes obo:BSPO_0000092c
Restrictions obo:BSPO_0015003op some obo:BSPO_0000012c

antero-medial marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000042
Super-classes obo:BSPO_0000671c
obo:BSPO_0000683c
obo:BSPO_0000050c

apical/basal compartment boundaryc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000043
Super-classes obo:BSPO_0000092c
Restrictions obo:BSPO_0015003op some obo:BSPO_0000014c

proximal/distal compartment boundaryc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000044
Super-classes obo:BSPO_0000092c
Restrictions obo:BSPO_0015003op some obo:BSPO_0000015c

antero-lateral marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000045
Super-classes obo:BSPO_0000671c
obo:BSPO_0000682c
obo:BSPO_0000029c

postero-medial marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000046
Super-classes obo:BSPO_0000672c
obo:BSPO_0000683c
obo:BSPO_0000064c

postero-lateral marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000047
Super-classes obo:BSPO_0000682c
obo:BSPO_0000672c
obo:BSPO_0000028c

dorso-medial marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000048
Super-classes obo:BSPO_0000679c
obo:BSPO_0000069c
obo:BSPO_0000683c

ventro-medial marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000049
Super-classes obo:BSPO_0000112c
obo:BSPO_0000684c
obo:BSPO_0000683c

antero-medial regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000050
Super-classes obo:BSPO_0000083c
obo:BSPO_0000071c
Sub-classes obo:BSPO_0000042c

anatomical gradientc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000051
Super-classes obo:CARO_0000006c
Sub-classes obo:BSPO_0000021c
obo:BSPO_0000023c
obo:BSPO_0000053c
obo:BSPO_0000024c
obo:BSPO_0000052c
obo:BSPO_0000020c

anterior-posterior gradientc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000052
Super-classes obo:BSPO_0000051c
Restrictions obo:BSPO_0015003op some obo:BSPO_0000013c

dorsal-ventral gradientc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000053
Super-classes obo:BSPO_0000051c
Restrictions obo:BSPO_0015003op some obo:BSPO_0000016c

anatomical sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000054
Super-classes obo:BSPO_0000070c
Sub-classes obo:BSPO_0000063c
obo:BSPO_0000066c
obo:BSPO_0000062c
obo:BSPO_0000000c
obo:BSPO_0000004c
obo:BSPO_0000022c
obo:BSPO_0000056c
obo:BSPO_0000007c
obo:BSPO_0000130c
obo:BSPO_0000061c
obo:BSPO_0000060c
obo:BSPO_0000065c
obo:BSPO_0000059c
obo:BSPO_0000067c
obo:BSPO_0000057c
obo:BSPO_0000058c
obo:BSPO_0000129c
obo:BSPO_0000055c
obo:BSPO_0000003c
obo:BSPO_0000002c
obo:BSPO_0000025c
obo:BSPO_0000068c
obo:BSPO_0000001c
In domain of obo:BSPO_0015007op
obo:BSPO_0015001op

anterior sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000055
Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015007op some obo:BSPO_0000013c
obo:BSPO_0000113op some obo:BSPO_0000056c
obo:BSPO_0000096op some obo:BSPO_0000056c

posterior sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000056
Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015001op some obo:BSPO_0000013c
obo:BSPO_0000099op some obo:BSPO_0000055c

apical sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000057
Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015007op some obo:BSPO_0000014c
obo:BSPO_0000113op some obo:BSPO_0000058c

basal sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000058
Description

The part of the organism attached to a substrate. Axis of symmetry.

Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015001op some obo:BSPO_0000014c

central sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000059
Description

central is not an axis direction

Super-classes obo:BSPO_0000054c

contralateral sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000060
Description

inherited from flybase cv. not clear how this would be used. Suggest we obsolete, and use the corresponding relation.

Super-classes obo:BSPO_0000054c

proximal sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000061
Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015007op some obo:BSPO_0000015c
obo:BSPO_0000113op some obo:BSPO_0000062c

distal sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000062
Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015001op some obo:BSPO_0000015c
obo:BSPO_0000097op some obo:BSPO_0000061c

dorsal sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000063
Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0000098op some obo:BSPO_0000066c
obo:BSPO_0000113op some obo:BSPO_0000068c
obo:BSPO_0015007op some obo:BSPO_0000016c

postero-medial regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000064
Super-classes obo:BSPO_0000083c
obo:BSPO_0000072c
Sub-classes obo:BSPO_0000046c

ipsilateral sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000065
Description

inherited from flybase cv. not clear how this would be used. Suggest we obsolete, and use the corresponding relation.

Super-classes obo:BSPO_0000054c

lateral sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000066
Super-classes obo:BSPO_0000054c

medial sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000067
Description

a point in the centre of the organism (where the left-right axis intersects the midsagittal plane)

Super-classes obo:BSPO_0000054c

ventral sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000068
Super-classes obo:BSPO_0000054c
Restrictions obo:BSPO_0015001op some obo:BSPO_0000016c

dorso-medial regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000069
Super-classes obo:BSPO_0000079c
obo:BSPO_0000083c
Sub-classes obo:BSPO_0000048c

anatomical regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000070
Description

to be merged into CARO

Super-classes obo:CARO_0000003c
Sub-classes obo:BSPO_0000075c
obo:BSPO_0000071c
obo:BSPO_0000083c
obo:BSPO_0000079c
obo:BSPO_0000082c
obo:BSPO_0000076c
obo:BSPO_0000054c
obo:BSPO_0000084c
obo:BSPO_0000031c
obo:BSPO_0000077c
obo:BSPO_0000074c
obo:BSPO_0000078c
obo:BSPO_0000081c
obo:BSPO_0000034c
obo:BSPO_0000127c
obo:BSPO_0000032c
obo:BSPO_0000072c
obo:BSPO_0000073c
obo:BSPO_0000006c
obo:BSPO_0000033c
obo:BSPO_0000128c

anterior regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000071
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000055c
Sub-classes obo:BSPO_0000027c
obo:BSPO_0000029c
obo:BSPO_0000026c
obo:BSPO_0000036c
obo:BSPO_0000671c
obo:BSPO_0000050c

posterior regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000072
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000056c
Sub-classes obo:BSPO_0000030c
obo:BSPO_0000035c
obo:BSPO_0000037c
obo:BSPO_0000064c
obo:BSPO_0000028c
obo:BSPO_0000672c

apical regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000073
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000057c
Sub-classes obo:BSPO_0000673c

basal regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000074
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000058c
Sub-classes obo:BSPO_0000674c

central regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000075
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000059c

contralateral regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000076
Description

inherited from flybase cv. not clear how this would be used

Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000060c

proximal regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000077
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000061c
Sub-classes obo:BSPO_0000677c

distal regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000078
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000062c
Sub-classes obo:BSPO_0000678c

dorsal regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000079
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000063c
Sub-classes obo:BSPO_0000069c
obo:BSPO_0000679c
obo:BSPO_0000038c
obo:BSPO_0000030c
obo:BSPO_0000026c
obo:BSPO_0000080c

dorso-lateral regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000080
Super-classes obo:BSPO_0000082c
obo:BSPO_0000079c
Sub-classes obo:BSPO_0000680c

ipsilateral regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000081
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000065c

lateral regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000082
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000066c
Sub-classes obo:BSPO_0000029c
obo:BSPO_0000028c
obo:BSPO_0000080c
obo:BSPO_0000085c
obo:BSPO_0000682c

medial regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000083
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000067c
Sub-classes obo:BSPO_0000683c
obo:BSPO_0000064c
obo:BSPO_0000112c
obo:BSPO_0000050c
obo:BSPO_0000069c

ventral regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000084
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000068c
Sub-classes obo:BSPO_0000085c
obo:BSPO_0000027c
obo:BSPO_0000035c
obo:BSPO_0000039c
obo:BSPO_0000112c
obo:BSPO_0000684c

ventro-lateral regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000085
Description

This is an example of a composition of two axis positions.

Super-classes obo:BSPO_0000084c
obo:BSPO_0000082c
Sub-classes obo:BSPO_0000685c

anatomical compartmentc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000086
Description

to be merged into CARO

Super-classes obo:CARO_0000003c
Sub-classes obo:BSPO_0000090c
obo:BSPO_0000087c
obo:BSPO_0000091c
obo:BSPO_0000088c
obo:BSPO_0000089c

anterior compartmentc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000087
Super-classes obo:BSPO_0000086c

compartment boundaryc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000088
Super-classes obo:BSPO_0000086c

dorsal compartmentc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000089
Super-classes obo:BSPO_0000086c

posterior compartmentc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000090
Super-classes obo:BSPO_0000086c

ventral compartmentc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000091
Super-classes obo:BSPO_0000086c

anatomical compartment boundaryc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000092
Description

to be merged into CARO

Super-classes obo:CARO_0000010c
Sub-classes obo:BSPO_0000040c
obo:BSPO_0000093c
obo:BSPO_0000094c
obo:BSPO_0000041c
obo:BSPO_0000043c
obo:BSPO_0000044c

anterior/posterior compartment boundaryc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000093
Super-classes obo:BSPO_0000092c

dorsal/ventral compartment boundaryc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000094
Super-classes obo:BSPO_0000092c

ventro-medial regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000112
Super-classes obo:BSPO_0000083c
obo:BSPO_0000084c
Sub-classes obo:BSPO_0000049c

peripheral regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000127
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000129c

axial regionc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000128
Super-classes obo:BSPO_0000070c
Restrictions obo:RO_0002131op some obo:BSPO_0000130c

peripheral sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000129
Super-classes obo:BSPO_0000054c

axial sidec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000130
Super-classes obo:BSPO_0000054c

adaxial-abaxial axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000195
Super-classes obo:BSPO_0000010c

medial-external axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000196
Description

The medial-external axis could apply to a sphere-shaped body.

Super-classes obo:BSPO_0000010c
Sub-classes obo:BSPO_0001001c
obo:BSPO_0000197c

medial-radial axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000197
Description

In plants, lateral growth (http://purl.obolibrary.org/obo/GO_0080190) run is along the medial/radial axis (from medial to radial) [RW]. Also applies to radially symmetrical animals such as sea urchins, cnidarians [PM] or applies to more-or-less cylindrical body parts in animals, like limbs.

Super-classes obo:BSPO_0000196c

oral-aboral axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000198
Super-classes obo:BSPO_0000010c

animal-vegetal axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000199
Super-classes obo:BSPO_0000010c

apical-basal axis relative to direction of growthc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000200
Description

Plant structures that do not grow from an apical meristem, such as vascular leaves or petals, should be described using the proximal-distal axis. The proximal-distal axis may also be used for branches or lateral roots, and, in those cases, is concordant with the apical-basal axis.

Super-classes obo:BSPO_0000010c

tangential planec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000201
Description

Need to add logical definitions.

Super-classes obo:BSPO_0000400c

radial planec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000202
Description

Need to add logical definitions.

Super-classes obo:BSPO_0000400c

anterior surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000371
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000055c

posterior surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000372
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000056c

apical surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000373
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000057c

basal surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000374
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000058c

contralateral surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000376
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000060c

proximal surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000377
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000061c

distal surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000378
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000062c

dorsal surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000379
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000063c

ipsilateral surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000381
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000065c

lateral surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000382
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000066c

medial surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000383
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000067c

ventral surfacec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000384
Super-classes obo:BSPO_0000005c
Restrictions obo:BSPO_0015008op some obo:BSPO_0000068c

anatomical planec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000400
Description

These anatomical sections are applicable to most bilaterally symmetrical animals, but bipedal animals such as humans have more complex usage of these terms. For example, in post-embryonic humans a coronal plane is vertical and a transverse plane is horizontal, but for embryos and quadrupeds a coronal plane is horizontal and a transverse plane is vertical.

Super-classes obo:CARO_0000010c
Sub-classes obo:BSPO_0000019c
obo:BSPO_0000201c
obo:BSPO_0000417c
obo:BSPO_0000202c
obo:BSPO_0000018c
In range of obo:BSPO_0015005op

sagittal planec # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000417
Super-classes obo:BSPO_0000400c
obo:BSPO_0000010c
Restrictions obo:BSPO_0015005op some obo:BSPO_0000017c
bspo:parallel_toop some obo:BSPO_0000016c
bspo:parallel_toop some obo:BSPO_0000013c
Sub-classes obo:BSPO_0000008c
obo:BSPO_0000009c

anterior marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000671
Super-classes obo:BSPO_0000071c
obo:BSPO_0000006c
Sub-classes obo:BSPO_0000042c
obo:BSPO_0000045c
obo:BSPO_0000688c
obo:BSPO_0000686c

posterior marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000672
Super-classes obo:BSPO_0000006c
obo:BSPO_0000072c
Sub-classes obo:BSPO_0000046c
obo:BSPO_0000687c
obo:BSPO_0000047c
obo:BSPO_0000689c

apical marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000673
Super-classes obo:BSPO_0000073c
obo:BSPO_0000006c

basal marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000674
Super-classes obo:BSPO_0000074c
obo:BSPO_0000006c

proximal marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000677
Super-classes obo:BSPO_0000006c
obo:BSPO_0000077c

distal marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000678
Super-classes obo:BSPO_0000006c
obo:BSPO_0000078c

dorsal marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000679
Super-classes obo:BSPO_0000079c
obo:BSPO_0000006c
Sub-classes obo:BSPO_0000048c
obo:BSPO_0000686c
obo:BSPO_0000687c
obo:BSPO_0000680c

dorso-lateral marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000680
Super-classes obo:BSPO_0000080c
obo:BSPO_0000682c
obo:BSPO_0000679c

lateral marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000682
Super-classes obo:BSPO_0000082c
obo:BSPO_0000006c
Sub-classes obo:BSPO_0000685c
obo:BSPO_0000045c
obo:BSPO_0000047c
obo:BSPO_0000680c

medial marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000683
Super-classes obo:BSPO_0000083c
obo:BSPO_0000006c
Sub-classes obo:BSPO_0000046c
obo:BSPO_0000048c
obo:BSPO_0000042c
obo:BSPO_0000049c

ventral marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000684
Super-classes obo:BSPO_0000006c
obo:BSPO_0000084c
Sub-classes obo:BSPO_0000685c
obo:BSPO_0000688c
obo:BSPO_0000049c
obo:BSPO_0000689c

ventro-lateral marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000685
Description

This is an example of a composition of two axis positions

Super-classes obo:BSPO_0000682c
obo:BSPO_0000684c
obo:BSPO_0000085c

antero-dorsal marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000686
Super-classes obo:BSPO_0000679c
obo:BSPO_0000026c
obo:BSPO_0000671c

postero-dorsal marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000687
Super-classes obo:BSPO_0000030c
obo:BSPO_0000679c
obo:BSPO_0000672c

antero-ventral marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000688
Super-classes obo:BSPO_0000671c
obo:BSPO_0000027c
obo:BSPO_0000684c

postero-ventral marginc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0000689
Super-classes obo:BSPO_0000035c
obo:BSPO_0000684c
obo:BSPO_0000672c

medial-lateral axisc # Classes

URI http://purl.obolibrary.org/obo/BSPO_0001001
Description

Properly, the ML axis is a half axis; practically, its usage is less clumsy and less linguistically biased than "left-right". The terms may still be used relatively to describe locations along the LR axis. The gills are medial to the operculum, but lateral to the heart.

Super-classes obo:BSPO_0000196c

anatomical entityc # Classes

URI http://purl.obolibrary.org/obo/CARO_0000000
Super-classes obo:CARO_0030000c
Sub-classes obo:CARO_0000006c
obo:CARO_0000007c
In range of http://purl.obolibrary.org/obo/#_has_start_pointop
obo:BSPO_0015004op

anatomical structurec # Classes

URI http://purl.obolibrary.org/obo/CARO_0000003
Super-classes obo:CARO_0000006c
Sub-classes obo:BSPO_0000070c
obo:BSPO_0000086c

material anatomical entityc # Classes

URI http://purl.obolibrary.org/obo/CARO_0000006
Super-classes obo:CARO_0000000c
obo:BFO_0000040c
Sub-classes obo:CARO_0000003c
obo:BSPO_0000051c

immaterial anatomical entityc # Classes

URI http://purl.obolibrary.org/obo/CARO_0000007
Super-classes obo:BFO_0000141c
obo:CARO_0000000c
Sub-classes obo:CARO_0000008c
obo:CARO_0000010c

anatomical linec # Classes

URI http://purl.obolibrary.org/obo/CARO_0000008
Super-classes obo:CARO_0000007c
Sub-classes obo:BSPO_0000010c

anatomical boundaryc # Classes

URI http://purl.obolibrary.org/obo/CARO_0000010
Super-classes obo:CARO_0000007c
Sub-classes obo:BSPO_0000400c
obo:BSPO_0000092c
obo:BSPO_0000005c

biological entityc # Classes

URI http://purl.obolibrary.org/obo/CARO_0030000
Super-classes obo:BFO_0000004c
Sub-classes obo:CARO_0000000c

molecular_functionc # Classes

URI http://purl.obolibrary.org/obo/GO_0003674
Super-classes obo:BFO_0000015c
Sub-classes obo:GO_0003824c

catalytic activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0003824
Super-classes obo:GO_0003674c
Sub-classes obo:GO_0016740c

biological_processc # Classes

URI http://purl.obolibrary.org/obo/GO_0008150
Super-classes obo:BFO_0000015c

kinase activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0016301
Super-classes obo:GO_0016772c
Restrictions obo:RO_0002481op

transferase activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0016740
Super-classes obo:GO_0003824c
Sub-classes obo:GO_0016772c

transferase activity, transferring phosphorus-containing groupsc # Classes

URI http://purl.obolibrary.org/obo/GO_0016772
Super-classes obo:GO_0016740c
Sub-classes obo:GO_0016301c

data itemc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000027
Super-classes obo:IAO_0000030c
Sub-classes obo:IAO_0000102c

information content entityc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000030
Super-classes obo:BFO_0000031c
Sub-classes obo:IAO_0000027c

curation status specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000078
Super-classes obo:IAO_0000102c
Members obo:IAO_0000120
obo:IAO_0000125
obo:IAO_0000122
obo:IAO_0000121
obo:IAO_0000428
obo:IAO_0000123
obo:IAO_0000124
obo:IAO_0000002
obo:IAO_0000423

data about an ontology partc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000102
Super-classes obo:IAO_0000027c
Sub-classes obo:IAO_0000078c
obo:IAO_0000225c
obo:IAO_0000409c

obsolescence reason specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000225
Super-classes obo:IAO_0000102c
Members obo:IAO_0000229
obo:IAO_0000228
obo:IAO_0000103
obo:IAO_0000226
obo:IAO_0000227

denotator typec # Classes

URI http://purl.obolibrary.org/obo/IAO_0000409
Super-classes obo:IAO_0000102c
Members obo:IAO_0000410
obo:IAO_0000421
obo:IAO_0000420

Object Properties

has start pointop # OPs

URI http://purl.obolibrary.org/obo/#_has_start_point
Description

Axes can be defined in a given species by subtyping the relevant axis type and stating a start and end point.

Domain(s) obo:BSPO_0000010c
Range(s) obo:CARO_0000000c

part ofop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000050
Super-properties obo:RO_0002131op
Inverse properties obo:BFO_0000051op

has partop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000051
Super-properties obo:RO_0002131op

preceded byop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000062
Source http://www.obofoundry.org/ro/#OBO_REL:preceded_by
Super-properties obo:RO_0002086op
Inverse properties obo:BFO_0000063op
Domain(s) obo:BFO_0000003c
Range(s) obo:BFO_0000003c

precedesop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000063
Super-properties obo:RO_0002222op
Domain(s) obo:BFO_0000003c
Range(s) obo:BFO_0000003c

anatomical relationop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000095

anterior toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000096
Inverse properties obo:BSPO_0000099op

distal toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000097
Inverse properties obo:BSPO_0000100op

dorsal toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000098
Inverse properties obo:BSPO_0000102op

posterior toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000099

proximal toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000100
Description

The elbow is proximal to the hand, but distal to the shoulder.

obsolete surroundsop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000101

ventral toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000102

vicinity ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000103

approximately perpendicular toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000104
Domain(s) obo:BSPO_0000010c
Range(s) obo:BSPO_0000010c

ipsilateral toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000105

contralateral toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000106
Super-properties obo:BSPO_0000113op

deep toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000107
Inverse properties obo:BSPO_0000108op

superficial toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000108

obsolete surrounded_byop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000109

left ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000110
Inverse properties obo:BSPO_0000111op

right ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000111

opposite toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000113

lateral toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000114
Inverse properties obo:BSPO_0000115op

X medial to y if x is closer to the midsagittal plane than y.op # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000115

in left side ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000120
Super-properties obo:BSPO_0000126op

in right side ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000121
Super-properties obo:BSPO_0000126op

in posterior side ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000122
Super-properties obo:BFO_0000050op

in anterior side ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000123
Super-properties obo:BFO_0000050op

in proximal side ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000124
Super-properties obo:BFO_0000050op

in distal side ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000125
Super-properties obo:BFO_0000050op

in lateral side ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0000126
Super-properties obo:BFO_0000050op

in superficial part ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0001100
Super-properties obo:BFO_0000050op

in deep part ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0001101
Super-properties obo:BFO_0000050op

proximalmost part ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0001106
Super-properties obo:BSPO_0000124op

immediately deep toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0001107
Super-properties obo:BSPO_0000107op
Inverse properties obo:BSPO_0015014op

distalmost part ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0001108
Super-properties obo:BSPO_0000125op

preaxialmost part ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0001113
Super-properties obo:BFO_0000050op

postaxial toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0001114

postaxialmost part ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0001115
Super-properties obo:BFO_0000050op

intersects midsagittal plane ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0005001
Super-properties obo:BFO_0000050op

finishes axisop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015001
Description

A directional axis can be divided by a plane. Following Allen Interval Algebra terminology we say that the side on which the axis initiates starts the axis, with the other side finishing the axis. If s finishes axis x, and x has end point p, then x overlaps p

Domain(s) obo:BSPO_0000054c
Range(s) obo:BSPO_0000010c

follows axisop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015002
Range(s) obo:BSPO_0000010c

has axisop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015003

has end pointop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015004
Description

Axes can be defined in a given species by subtyping the relevant axis type and stating a end and end point

Domain(s) obo:BSPO_0000010c
Range(s) obo:CARO_0000000c

orthogonal toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015005
Domain(s) obo:BSPO_0000010c
Range(s) obo:BSPO_0000400c

passes throughop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015006
Domain(s) obo:BSPO_0000010c

starts axisop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015007
Description

A directional axis can be divided by a plane. Following Allen Interval Algebra terminology we say that the side on which the axis initiates starts the axis, with the other side finishing the axis. . If s starts axis x, and x has start point p, then x overlaps p

Domain(s) obo:BSPO_0000054c
Range(s) obo:BSPO_0000010c

surface ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015008
Description

placeholder. used for relation between anatomical surface and an anatomical side.

Domain(s) obo:BSPO_0000005c

immediately anterior toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015009
Super-properties obo:BSPO_0000096op
Inverse properties obo:BSPO_0015012op

immediately distal toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015010
Super-properties obo:BSPO_0000097op
Inverse properties obo:BSPO_0015013op

immediately dorsal toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015011
Super-properties obo:BSPO_0000098op
Inverse properties obo:BSPO_0015015op

immediately posterior toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015012
Super-properties obo:BSPO_0000099op

immediately proximal toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015013
Super-properties obo:BSPO_0000100op

immediately superficial toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015014
Super-properties obo:BSPO_0000108op

immediately ventral toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015015
Super-properties obo:BSPO_0000102op

immediately left ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015016
Super-properties obo:BSPO_0000110op
Inverse properties obo:BSPO_0015017op

immediately right ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015017
Super-properties obo:BSPO_0000111op

in dorsal side ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015101
Super-properties obo:BFO_0000050op

in ventral side ofop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015102
Super-properties obo:BFO_0000050op

oral toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015201

aboral toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_0015202

preaxial toop # OPs

URI http://purl.obolibrary.org/obo/BSPO_1000000

characteristic ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000052
Description

Note that this relation was previously called "inheres in", but was changed to be called "characteristic of" because BFO2 uses "inheres in" in a more restricted fashion. This relation differs from BFO2:inheres_in in two respects: (1) it does not impose a range constraint, and thus it allows qualities of processes, as well as of information entities, whereas BFO2 restricts inheres_in to only apply to independent continuants (2) it is declared functional, i.e. something can only be a characteristic of one thing.

Super-properties obo:RO_0002314op
Inverse properties obo:RO_0000053op

has characteristicop # OPs

URI http://purl.obolibrary.org/obo/RO_0000053
Range(s) obo:BFO_0000020c

participates inop # OPs

URI http://purl.obolibrary.org/obo/RO_0000056
Inverse properties obo:RO_0000057op
Domain(s) obo:BFO_0000002c
Range(s) obo:BFO_0000003c

has participantop # OPs

URI http://purl.obolibrary.org/obo/RO_0000057
Source http://www.obofoundry.org/ro/#OBO_REL:has_participant
Domain(s) obo:BFO_0000003c
Range(s) obo:BFO_0000002c

function ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000079
Description

This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.

Super-properties obo:RO_0000052op
Inverse properties obo:RO_0000085op
Domain(s) obo:BFO_0000034c

quality ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000080
Description

This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.

Super-properties obo:RO_0000052op
Inverse properties obo:RO_0000086op

role ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000081
Description

This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.

Super-properties obo:RO_0000052op
Inverse properties obo:RO_0000087op

has functionop # OPs

URI http://purl.obolibrary.org/obo/RO_0000085
Super-properties obo:RO_0000053op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000034c

has qualityop # OPs

URI http://purl.obolibrary.org/obo/RO_0000086
Super-properties obo:RO_0000053op
Range(s) obo:BFO_0000019c

has roleop # OPs

URI http://purl.obolibrary.org/obo/RO_0000087
Super-properties obo:RO_0000053op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000023c

has dispositionop # OPs

URI http://purl.obolibrary.org/obo/RO_0000091
Super-properties obo:RO_0000053op
Inverse properties obo:RO_0000092op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000016c

disposition ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000092
Description

This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.

Super-properties obo:RO_0000052op

has regulatory component activityop # OPs

URI http://purl.obolibrary.org/obo/RO_0002013
Super-properties obo:RO_0002334op obo:RO_0002017op

has negative regulatory component activityop # OPs

URI http://purl.obolibrary.org/obo/RO_0002014
Description

By convention GO molecular functions are classified by their effector function. Internal regulatory functions are treated as components. For example, NMDA glutmate receptor activity is a cation channel activity with positive regulatory component 'glutamate binding' and negative regulatory components including 'zinc binding' and 'magnesium binding'.

Super-properties obo:RO_0002013op obo:RO_0002335op

has positive regulatory component activityop # OPs

URI http://purl.obolibrary.org/obo/RO_0002015
Description

By convention GO molecular functions are classified by their effector function and internal regulatory functions are treated as components. So, for example calmodulin has a protein binding activity that has positive regulatory component activity calcium binding activity. Receptor tyrosine kinase activity is a tyrosine kinase activity that has positive regulatory component 'ligand binding'.

Super-properties obo:RO_0002013op obo:RO_0002336op

has component activityop # OPs

URI http://purl.obolibrary.org/obo/RO_0002017
Description

A 'has component activity' B if A is A and B are molecular functions (GO_0003674) and A has_component B.

Super-properties obo:RO_0002018op

has component processop # OPs

URI http://purl.obolibrary.org/obo/RO_0002018
Super-properties obo:RO_0002180op
Domain(s) obo:BFO_0000015c
Range(s) obo:BFO_0000015c

directly regulated byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002022
Description

Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2.

Super-properties obo:RO_0002334op
Inverse properties obo:RO_0002578op

directly negatively regulated byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002023
Super-properties obo:RO_0002022op
Inverse properties obo:RO_0002630op

directly positively regulated byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002024
Super-properties obo:RO_0002022op
Inverse properties obo:RO_0002629op

has effector activityop # OPs

URI http://purl.obolibrary.org/obo/RO_0002025
Description

This relation is designed for constructing compound molecular functions, typically in combination with one or more regulatory component activity relations.

Super-properties obo:RO_0002017op

ends afterop # OPs

URI http://purl.obolibrary.org/obo/RO_0002086
Description

X ends_after Y iff: end(Y) before_or_simultaneous_with end(X)

Super-properties obo:RO_0002222op

immediately preceded byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002087
Description

X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y)

Super-properties obo:BFO_0000062op
Inverse properties obo:RO_0002090op

immediately precedesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002090
Description

X immediately_precedes_Y iff: end(X) simultaneous_with start(Y)

Super-properties obo:BFO_0000063op

overlapsop # OPs

URI http://purl.obolibrary.org/obo/RO_0002131
Description

"(forall (x y) (iff (overlaps x y) (exists (z) (and (part of z x) (part of z y)))))" CLIF []

Super-properties obo:RO_0002323op

spatially disjoint fromop # OPs

URI http://purl.obolibrary.org/obo/RO_0002163
Super-properties obo:RO_0002323op

has componentop # OPs

URI http://purl.obolibrary.org/obo/RO_0002180
Super-properties obo:BFO_0000051op

regulatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002211
Super-properties obo:RO_0002411op
Inverse properties obo:RO_0002334op
Domain(s) obo:BFO_0000015c
Range(s) obo:BFO_0000015c

negatively regulatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002212
Super-properties obo:RO_0002211op obo:RO_0002305op
Inverse properties obo:RO_0002335op

positively regulatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002213
Super-properties obo:RO_0002304op obo:RO_0002211op
Inverse properties obo:RO_0002336op

capable ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002215
Super-properties obo:RO_0002216op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000015c

capable of part ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002216
Super-properties obo:RO_0002328op obo:RO_0002500op

adjacent toop # OPs

URI http://purl.obolibrary.org/obo/RO_0002220
Super-properties obo:RO_0002163op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000004c

temporally related toop # OPs

URI http://purl.obolibrary.org/obo/RO_0002222
Source https://docs.google.com/document/d/1kBv1ep_9g3sTR-SD3jqzFqhuwo9TPNF-l-9fUDbO6rM/edit?pli=1
Description

A relation that holds between two occurrents. This is a grouping relation that collects together all the Allen relations.

Domain(s) obo:BFO_0000003c
Range(s) obo:BFO_0000003c

has inputop # OPs

URI http://purl.obolibrary.org/obo/RO_0002233
Super-properties obo:RO_0000057op
Inverse properties obo:RO_0002352op
Domain(s) obo:BFO_0000015c

acts upstream ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002263
Super-properties obo:RO_0002264op

acts upstream of or withinop # OPs

URI http://purl.obolibrary.org/obo/RO_0002264
Super-properties obo:RO_0002500op

causally upstream of, positive effectop # OPs

URI http://purl.obolibrary.org/obo/RO_0002304
Description

holds between x and y if and only if x is causally upstream of y and the progression of x increases the frequency, rate or extent of y

Super-properties obo:RO_0004047op obo:RO_0002411op

causally upstream of, negative effectop # OPs

URI http://purl.obolibrary.org/obo/RO_0002305
Description

holds between x and y if and only if x is causally upstream of y and the progression of x decreases the frequency, rate or extent of y

Super-properties obo:RO_0002411op obo:RO_0004046op

characteristic of part ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002314
Super-properties obo:RO_0002502op

mereotopologically related toop # OPs

URI http://purl.obolibrary.org/obo/RO_0002323

enablesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002327
Super-properties obo:RO_0002215op
Inverse properties obo:RO_0002333op

functionally related toop # OPs

URI http://purl.obolibrary.org/obo/RO_0002328

part of structure that is capable ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002329
Super-properties obo:RO_0002328op

involved inop # OPs

URI http://purl.obolibrary.org/obo/RO_0002331
Super-properties obo:RO_0000056op obo:RO_0002431op

enabled byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002333
Super-properties obo:RO_0000057op obo:RO_0002328op

regulated byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002334
Super-properties obo:RO_0002427op
Domain(s) obo:BFO_0000015c
Range(s) obo:BFO_0000015c

negatively regulated byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002335
Super-properties obo:RO_0002334op

positively regulated byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002336
Super-properties obo:RO_0002334op

input ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002352
Super-properties obo:RO_0002328op obo:RO_0000056op

causally downstream ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002404
Super-properties obo:BFO_0000062op obo:RO_0002427op
Inverse properties obo:RO_0002411op

immediately causally downstream ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002405
Super-properties obo:RO_0002404op obo:RO_0002087op
Inverse properties obo:RO_0002412op

causally related toop # OPs

URI http://purl.obolibrary.org/obo/RO_0002410

causally upstream ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002411
Super-properties obo:RO_0002418op obo:BFO_0000063op

immediately causally upstream ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002412
Super-properties obo:RO_0002411op obo:RO_0002090op

causally upstream of or withinop # OPs

URI http://purl.obolibrary.org/obo/RO_0002418
Super-properties obo:RO_0002501op
Inverse properties obo:RO_0002427op

causally downstream of or withinop # OPs

URI http://purl.obolibrary.org/obo/RO_0002427
Super-properties obo:RO_0002501op

involved in regulation ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002428
Super-properties obo:RO_0002431op obo:RO_0002263op

involved in positive regulation ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002429
Super-properties obo:RO_0002428op

involved in negative regulation ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002430
Super-properties obo:RO_0002428op

involved in or involved in regulation ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002431
Super-properties obo:RO_0002500op obo:RO_0002264op obo:RO_0002328op

interacts withop # OPs

URI http://purl.obolibrary.org/obo/RO_0002434
Domain(s) obo:BFO_0000040c
Range(s) obo:BFO_0000040c

molecularly interacts withop # OPs

URI http://purl.obolibrary.org/obo/RO_0002436
Super-properties obo:RO_0002434op

phosphorylatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002447
Super-properties obo:RO_0002436op

directly regulates activity ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002448
Super-properties obo:RO_0011002op obo:RO_0002436op
Domain(s) obo:BFO_0000040c
Range(s) obo:BFO_0000040c

directly negatively regulates activity ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002449
Super-properties obo:RO_0002448op
Domain(s) obo:BFO_0000040c
Range(s) obo:BFO_0000040c

directly positively regulates activity ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002450
Super-properties obo:RO_0002448op
Domain(s) obo:BFO_0000040c
Range(s) obo:BFO_0000040c

helper property (not for use in curation)op # OPs

URI http://purl.obolibrary.org/obo/RO_0002464

is kinase activityop # OPs

URI http://purl.obolibrary.org/obo/RO_0002481
Super-properties obo:RO_0002564op

causal agent in processop # OPs

URI http://purl.obolibrary.org/obo/RO_0002500
Super-properties obo:RO_0002595op
Inverse properties obo:RO_0002608op

causal relation between processesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002501
Super-properties obo:RO_0002410op
Domain(s) obo:BFO_0000003c
Range(s) obo:BFO_0000003c

depends onop # OPs

URI http://purl.obolibrary.org/obo/RO_0002502

causal relation between entitiesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002506
Super-properties obo:RO_0002410op
Domain(s) obo:BFO_0000002c
Range(s) obo:BFO_0000002c

causally influenced byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002559
Super-properties obo:RO_0002506op
Inverse properties obo:RO_0002566op

interaction relation helper propertyop # OPs

URI http://purl.obolibrary.org/obo/RO_0002563
Super-properties obo:RO_0002464op

molecular interaction relation helper propertyop # OPs

URI http://purl.obolibrary.org/obo/RO_0002564
Super-properties obo:RO_0002563op

causally influencesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002566
Super-properties obo:RO_0002506op
Domain(s) obo:BFO_0000002c
Range(s) obo:BFO_0000002c

directly regulatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002578
Super-properties obo:RO_0002412op obo:RO_0002211op

has part structure that is capable ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002584
Super-properties obo:RO_0002595op obo:RO_0002328op

causal relation between material entity and a processop # OPs

URI http://purl.obolibrary.org/obo/RO_0002595
Super-properties obo:RO_0002410op
Domain(s) obo:BFO_0000040c
Range(s) obo:BFO_0000015c

capable of regulatingop # OPs

URI http://purl.obolibrary.org/obo/RO_0002596
Super-properties obo:RO_0002500op

capable of negatively regulatingop # OPs

URI http://purl.obolibrary.org/obo/RO_0002597
Super-properties obo:RO_0002596op

capable of positively regulatingop # OPs

URI http://purl.obolibrary.org/obo/RO_0002598
Super-properties obo:RO_0002596op

process has causal agentop # OPs

URI http://purl.obolibrary.org/obo/RO_0002608
Super-properties obo:RO_0002410op

directly positively regulatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002629
Super-properties obo:RO_0002213op obo:RO_0002578op

directly negatively regulatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002630
Super-properties obo:RO_0002212op obo:RO_0002578op

enables subfunctionop # OPs

URI http://purl.obolibrary.org/obo/RO_0004031
Super-properties obo:RO_0002328op

acts upstream of or within, positive effectop # OPs

URI http://purl.obolibrary.org/obo/RO_0004032
Super-properties obo:RO_0002264op

acts upstream of or within, negative effectop # OPs

URI http://purl.obolibrary.org/obo/RO_0004033
Super-properties obo:RO_0002264op

acts upstream of, positive effectop # OPs

URI http://purl.obolibrary.org/obo/RO_0004034
Super-properties obo:RO_0002263op obo:RO_0004032op

acts upstream of, negative effectop # OPs

URI http://purl.obolibrary.org/obo/RO_0004035
Super-properties obo:RO_0004033op obo:RO_0002263op

causally upstream of or within, negative effectop # OPs

URI http://purl.obolibrary.org/obo/RO_0004046
Super-properties obo:RO_0002418op

causally upstream of or within, positive effectop # OPs

URI http://purl.obolibrary.org/obo/RO_0004047
Super-properties obo:RO_0002418op

regulates activity ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0011002
Super-properties obo:RO_0002566op
Domain(s) obo:BFO_0000040c
Range(s) obo:BFO_0000040c

parallel toop # OPs

URI http://purl.obolibrary.org/obo/bspo#parallel_to

Annotation Properties

IAO_0000111ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000111

IAO_0000112ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000112

IAO_0000114ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000114

definitionap # APs

URI http://purl.obolibrary.org/obo/IAO_0000115

IAO_0000116ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000116

IAO_0000117ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000117

IAO_0000118ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000118

IAO_0000119ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000119

IAO_0000232ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000232

IAO_0000412ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000412

IAO_0000424ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000424

IAO_0000589ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000589

IAO_0000600ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000600

term replaced byap # APs

URI http://purl.obolibrary.org/obo/IAO_0100001
Description

Add as annotation triples in the granting ontology

RO_0001900ap # APs

URI http://purl.obolibrary.org/obo/RO_0001900

RO_0002259ap # APs

URI http://purl.obolibrary.org/obo/RO_0002259
Super-properties oboInOwl:SubsetPropertyap

RO_0002575ap # APs

URI http://purl.obolibrary.org/obo/RO_0002575

is a defining property chain axiomap # APs

URI http://purl.obolibrary.org/obo/RO_0002581

is a defining property chain axiom where second argument is reflexiveap # APs

URI http://purl.obolibrary.org/obo/RO_0002582

RO_0004049ap # APs

URI http://purl.obolibrary.org/obo/RO_0004049

RO_0004050ap # APs

URI http://purl.obolibrary.org/obo/RO_0004050

RO_0040042ap # APs

URI http://purl.obolibrary.org/obo/RO_0040042

synonym typically used in the context of human anatomyap # APs

URI http://purl.obolibrary.org/obo/bspo#human
Super-properties oboInOwl:SynonymTypePropertyap

synonym typically used in the context of vertebrate anatomyap # APs

URI http://purl.obolibrary.org/obo/bspo#vertebrate
Super-properties oboInOwl:SynonymTypePropertyap

ro-ecoap # APs

URI http://purl.obolibrary.org/obo/ro/subsets#ro-eco
Super-properties oboInOwl:SubsetPropertyap

valid_for_go_annotation_extensionap # APs

URI http://purl.obolibrary.org/obo/valid_for_go_annotation_extension
Super-properties oboInOwl:SubsetPropertyap

valid_for_go_gp2termap # APs

URI http://purl.obolibrary.org/obo/valid_for_go_gp2term
Super-properties oboInOwl:SubsetPropertyap

valid_for_go_ontologyap # APs

URI http://purl.obolibrary.org/obo/valid_for_go_ontology
Super-properties oboInOwl:SubsetPropertyap

valid_for_gocamap # APs

URI http://purl.obolibrary.org/obo/valid_for_gocam
Super-properties oboInOwl:SubsetPropertyap

descriptionap # APs

URI http://purl.org/dc/elements/1.1/description

sourceap # APs

URI http://purl.org/dc/elements/1.1/source

titleap # APs

URI http://purl.org/dc/elements/1.1/title

creatorap # APs

URI http://purl.org/dc/terms/creator

licenseap # APs

URI http://purl.org/dc/terms/license

sourceap # APs

URI http://purl.org/dc/terms/source

isRuleEnabledap # APs

URI http://swrl.stanford.edu/ontologies/3.3/swrla.owl#isRuleEnabled

namespace-id-ruleap # APs

URI http://www.geneontology.org/formats/oboInOwl#NamespaceIdRule

SubsetPropertyap # APs

URI http://www.geneontology.org/formats/oboInOwl#SubsetProperty

synonym_type_propertyap # APs

URI http://www.geneontology.org/formats/oboInOwl#SynonymTypeProperty

created_byap # APs

URI http://www.geneontology.org/formats/oboInOwl#created_by

creation_dateap # APs

URI http://www.geneontology.org/formats/oboInOwl#creation_date

default-namespaceap # APs

URI http://www.geneontology.org/formats/oboInOwl#default-namespace

database_cross_referenceap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasDbXref

has_exact_synonymap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasExactSynonym

has_narrow_synonymap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym

has_obo_format_versionap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion

has_obo_namespaceap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasOBONamespace

has_scopeap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasScope

has_synonym_typeap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasSynonymType

idap # APs

URI http://www.geneontology.org/formats/oboInOwl#id

inSubsetap # APs

URI http://www.geneontology.org/formats/oboInOwl#inSubset

is_metadata_tagap # APs

URI http://www.geneontology.org/formats/oboInOwl#is_metadata_tag

shorthandap # APs

URI http://www.geneontology.org/formats/oboInOwl#shorthand

commentap # APs

URI http://www.w3.org/2000/01/rdf-schema#comment

labelap # APs

URI http://www.w3.org/2000/01/rdf-schema#label

see alsoap # APs

URI http://www.w3.org/2000/01/rdf-schema#seeAlso

deprecatedap # APs

URI http://www.w3.org/2002/07/owl#deprecated

closeMatchap # APs

URI http://www.w3.org/2004/02/skos/core#closeMatch

Named Individuals

example to be eventually removedni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000002

failed exploratory termni

Class(es)
obo:IAO_0000225
URI http://purl.obolibrary.org/obo/IAO_0000103

metadata completeni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000120

organizational termni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000121

ready for releaseni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000122

metadata incompleteni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000123

uncuratedni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000124

pending final vettingni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000125

placeholder removedni

Class(es)
obo:IAO_0000225
URI http://purl.obolibrary.org/obo/IAO_0000226

terms mergedni

Class(es)
obo:IAO_0000225
URI http://purl.obolibrary.org/obo/IAO_0000227

term importedni

Class(es)
obo:IAO_0000225
URI http://purl.obolibrary.org/obo/IAO_0000228

term splitni

Class(es)
obo:IAO_0000225
URI http://purl.obolibrary.org/obo/IAO_0000229

universalni

Class(es)
obo:IAO_0000409
URI http://purl.obolibrary.org/obo/IAO_0000410

defined classni

Class(es)
obo:IAO_0000409
URI http://purl.obolibrary.org/obo/IAO_0000420

named class expressionni

Class(es)
obo:IAO_0000409
URI http://purl.obolibrary.org/obo/IAO_0000421

to be replaced with external ontology termni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000423

requires discussionni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000428

Namespaces

default (:)
http://purl.obolibrary.org/obo/bspo.owl
bspo
http://purl.obolibrary.org/obo/bspo#
dc
http://purl.org/dc/elements/1.1/
obo
http://purl.obolibrary.org/obo/
oboInOwl
http://www.geneontology.org/formats/oboInOwl#
owl
http://www.w3.org/2002/07/owl#
prov
http://www.w3.org/ns/prov#
rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#
rdfs
http://www.w3.org/2000/01/rdf-schema#
sdo
http://schema.org/
skos
http://www.w3.org/2004/02/skos/core#
subsets
http://purl.obolibrary.org/obo/ro/subsets#
swrl
http://www.w3.org/2003/11/swrl#
swrla
http://swrl.stanford.edu/ontologies/3.3/swrla.owl#
swrlb
http://www.w3.org/2003/11/swrlb#
terms
http://purl.org/dc/terms/
xsd
http://www.w3.org/2001/XMLSchema#

Legend

cClasses
opObject Properties
fpFunctional Properties
dpData Properties
dpAnnotation Properties
pProperties
niNamed Individuals