Core Ontology for Biology and Biomedicine

action specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000007

has super-classes

directive information entity^c

amino acid chain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000018263

has super-classes

molecule^c

has sub-classes

protein^c

anatomical entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001062

is equivalent to

material anatomical entity^c or immaterial anatomical entity^c

has super-classes

thing^c

has sub-classes

immaterial anatomical entity^c, material anatomical entity^c

assay^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000070

has super-classes

completely executed planned process^c

(has specified input^op some material entity^c) and (has specified output^op some data item^c)

atom^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000011

has super-classes

material entity^c

has part^op some atomic nucleus^c

is in domain of

has atomic number^dp

is disjoint with

subatomic particle^c, molecule^c

atomic nucleus^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_33252

has super-classes

subatomic particle^c

has part^op some proton^c

biological process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0008150

has super-classes

process^c

has part^op some gene product or complex activity^c

cell^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000000

has super-classes

material anatomical entity^c

cellular anatomical entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0110165

has super-classes

cellular_component^c

material anatomical entity^c

has part^op some molecule^c

cellular organism^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCBITaxon_131567

has super-classes

organism^c

cellular_component^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0005575

is equivalent to

protein-containing complex^c or virion component^c or cellular anatomical entity^c

has super-classes

material entity^c

has sub-classes

cellular anatomical entity^c, protein-containing complex^c, virion component^c

characteristic^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000502

has super-classes

thing^c

has sub-classes

electric charge^c, mass^c, realizable entity^c

collection of organisms^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PCO_0000000

has super-classes

material entity^c

has part^op some organism^c

completely executed planned process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000035

has super-classes

planned process^c

realizes^op some plan^c

has sub-classes

assay^c, investigation^c, material processing^c

is disjoint with

failed planned process^c

complex of molecules^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000080

has super-classes

material entity^c

has part^op some molecule^c

has sub-classes

protein-containing complex^c

data item^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000027

has super-classes

information content entity^c

has sub-classes

measurement datum^c

data transformation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0200000

has super-classes

planned process^c

(has specified input^op some data item^c) and (has specified output^op some data item^c)

device^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0001300

has super-classes

processed material entity^c

capable of^op some process^c

directive information entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000033

has super-classes

information content entity^c

has sub-classes

action specification^c, objective specification^c, plan specification^c

disposition^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000016

has super-classes

realizable entity^c

has sub-classes

function^c

ecosystem^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ENVO_01001110

has super-classes

material entity^c

electric charge^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002193

has super-classes

characteristic^c

electron^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_10545

has super-classes

subatomic particle^c

environmental process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ENVO_02500000

has super-classes

process^c

exposure of organism^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0001000

has super-classes

process^c

has participant^op some organism^c

failed planned process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000083

has super-classes

planned process^c

is disjoint with

completely executed planned process^c

function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000034

has super-classes

disposition^c

gene product or complex activity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0003674

has super-classes

process^c

geophysical entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ENVO_01000813

has super-classes

material entity^c

gross anatomical part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000021

has super-classes

material anatomical entity^c

immaterial anatomical entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000466

has super-classes

immaterial entity^c

anatomical entity^c

immaterial entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000141

has super-classes

thing^c

has sub-classes

immaterial anatomical entity^c, site^c

information content entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000030

has super-classes

thing^c

has sub-classes

data item^c, directive information entity^c

is in domain of

is about^op

investigation^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000066

has super-classes

completely executed planned process^c

mass^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000125

has super-classes

characteristic^c

material anatomical entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000465

is equivalent to

cell^c or gross anatomical part^c or organism^c or cellular anatomical entity^c

has super-classes

material entity^c

anatomical entity^c

has sub-classes

cell^c, cellular anatomical entity^c, gross anatomical part^c, organism^c, plant anatomical entity^c

material entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000040

has super-classes

thing^c

has sub-classes

atom^c, cellular_component^c, collection of organisms^c, complex of molecules^c, ecosystem^c, geophysical entity^c, material anatomical entity^c, molecule^c, processed material entity^c, subatomic particle^c

is in domain of

has number of atomic nuclei^dp

material processing^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000110

has super-classes

completely executed planned process^c

(has specified input^op some material entity^c) and (has specified output^op some material entity^c)

measurement datum^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000109

has super-classes

data item^c

molecule^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000013

has super-classes

material entity^c

has part^op some atom^c

has sub-classes

amino acid chain^c, nucleic acid chain^c

is disjoint with

atom^c

neutron^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_30222

has super-classes

subatomic particle^c

nucleic acid chain^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000049

has super-classes

molecule^c

objective specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000005

has super-classes

directive information entity^c

obsolete action specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000077

has super-classes

thing^c

obsolete cellular membrane^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000116

has super-classes

thing^c

obsolete elementary charge^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000005

has super-classes

thing^c

obsolete gene product^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000073

has super-classes

thing^c

obsolete geographical location^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000032

has super-classes

thing^c

obsolete immaterial anatomical entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000056

has super-classes

thing^c

obsolete macromolecular entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000014

has super-classes

thing^c

obsolete physical information carrier^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000122

has super-classes

thing^c

obsolete subcellular structure^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000020

has super-classes

thing^c

organism^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000022

has super-classes

material anatomical entity^c

has sub-classes

cellular organism^c

physico-chemical process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MOP_0000543

has super-classes

process^c

plan^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000260

has super-classes

realizable entity^c

concretizes^op some plan specification^c

plan specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000104

has super-classes

directive information entity^c

planned process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000082

has super-classes

process^c

has sub-classes

completely executed planned process^c, data transformation^c, failed planned process^c

is in domain of

has specified input^op, has specified output^op

is in range of

is specified input of^op, is specified output of^op

plant anatomical entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PO_0025131

has super-classes

material anatomical entity^c

process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000015

has super-classes

thing^c

has sub-classes

biological process^c, environmental process^c, exposure of organism^c, gene product or complex activity^c, physico-chemical process^c, planned process^c

is in domain of

has input^op, realizes^op

is in range of

capable of^op

processed material entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000026

has super-classes

material entity^c

is specified output of^op some material processing^c

has sub-classes

device^c

protein^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PR_000000001

has super-classes

amino acid chain^c

protein-containing complex^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0032991

has super-classes

complex of molecules^c

cellular_component^c

has part^op some protein^c

proton^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_24636

has super-classes

subatomic particle^c

realizable entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000017

has super-classes

characteristic^c

has sub-classes

disposition^c, plan^c, role^c

is in range of

realizes^op

role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000023

has super-classes

realizable entity^c

site^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000029

has super-classes

immaterial entity^c

subatomic particle^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_36342

has super-classes

material entity^c

has sub-classes

atomic nucleus^c, electron^c, neutron^c, proton^c

is disjoint with

atom^c

virion component^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0044423

has super-classes

cellular_component^c

capable of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002215

characteristic of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000052

concretizes^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000059

derives from^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001000

enabled by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002333

executed by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/COB_0000016

has characteristic^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000053

has input^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002233

has output^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002234

has part^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000051

has participant^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000057

has plan^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/COB_0000084

has specified input^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000293

has specified output^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000299

intended plan process type^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/COB_0000085

intended to realize^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/COB_0000081

is about^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000136

is concretized as^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000058

is specified input of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000295

is specified output of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000312

located in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001025

location of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001015

part of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000050

participates in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000056

realizes^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000055

surrounded by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002219

surrounds^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002221

has atomic number^dp back to ToC or Data Property ToC

IRI: http://purl.obolibrary.org/obo/COB_0000800

has inchi string^dp back to ToC or Data Property ToC

IRI: http://purl.obolibrary.org/obo/COB_0000803

has number of atomic nuclei^dp back to ToC or Data Property ToC

IRI: http://purl.obolibrary.org/obo/COB_0000801

has quantity^dp back to ToC or Data Property ToC

IRI: http://purl.obolibrary.org/obo/COB_0000511

definition^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000115

description^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/description

editor note^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000116

license^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/license

term replaced by^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0100001

title^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/title