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Evidence & Conclusion Ontology (ECO)

Metadata

URI
http://purl.obolibrary.org/obo/eco.owl
Version URI
http://purl.obolibrary.org/obo/eco/releases/2021-10-08/eco.owl
License
https://creativecommons.org/publicdomain/zero/1.0/
Ontology RDF
RDF (turtle)

Description

ECO (https://github.com/evidenceontology/evidenceontology) is released into the public domain under CC0 1.0 Universal (CC0 1.0). Anyone is free to copy, modify, or distribute the work, even for commercial purposes, without asking permission. Please see the Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/) for an easy-to-read description of CC0 1.0 or the full legal code (https://creativecommons.org/publicdomain/zero/1.0/legalcode) for more detailed information. To get a sense of why ECO is CC0 as opposed to licensed under CC-BY, please read this thoughtful discussion (https://github.com/OBOFoundry/OBOFoundry.github.io/issues/285) on the OBO Foundry GitHub site.

Table of Contents

  1. Classes
  2. Object Properties
  3. Functional Properties
  4. Datatype Properties
  5. Annotation Properties
  6. Namespaces
  7. Legend

Overview

Pictures say 1,000 words
Figure 1: Ontology overview

Classes

entityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000001
Sub-classes obo:BFO_0000002c
obo:BFO_0000003c

continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000002
Super-classes obo:BFO_0000001c
Sub-classes obo:BFO_0000020c
obo:BFO_0000004c
obo:BFO_0000031c
In domain of obo:RO_0000056op
In range of obo:RO_0000057op

occurrentc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000003
Super-classes obo:BFO_0000001c
Sub-classes obo:BFO_0000015c
In domain of obo:BFO_0000062op
obo:BFO_0000063op
obo:RO_0000057op
In range of obo:RO_0000056op
obo:RO_0002222op
obo:BFO_0000062op
obo:BFO_0000063op

independent continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000004
Super-classes obo:BFO_0000002c
Sub-classes obo:BFO_0000040c
obo:BFO_0000141c
In domain of obo:RO_0001000op
obo:RO_0000087op
obo:RO_0000085op
In range of obo:RO_0001000op

processc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000015
Super-classes obo:BFO_0000003c
Sub-classes obo:GO_0003674c
obo:GO_0008150c
obo:OBI_0000011c
In domain of obo:BFO_0000055op
In range of obo:BFO_0000054op
obo:IAO_0000413op

dispositionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000016
Super-classes obo:BFO_0000017c
Sub-classes obo:BFO_0000034c
obo:OBI_1110093c
obo:OBI_1110045c

realizable entityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000017
Super-classes obo:BFO_0000020c
Sub-classes obo:BFO_0000023c
obo:BFO_0000016c
In domain of obo:BFO_0000054op
In range of obo:BFO_0000055op

qualityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000019
Super-classes obo:BFO_0000020c
Sub-classes obo:OBI_0000654c
obo:IAO_0000015c
obo:PATO_0001241c
obo:PATO_0000125c
In range of obo:IAO_0000221op
obo:RO_0000086op

specifically dependent continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000020
Super-classes obo:BFO_0000002c
Sub-classes obo:BFO_0000019c
obo:BFO_0000017c
In domain of obo:RO_0000059op
In range of obo:RO_0000053op
obo:RO_0000058op

rolec # Classes

URI http://purl.obolibrary.org/obo/BFO_0000023
Super-classes obo:BFO_0000017c
Sub-classes obo:OBI_0302732c
obo:OBI_0002444c
obo:OBI_0000025c
obo:OBI_0000416c
obo:REO_0000171c
obo:OBI_1110120c
obo:OBI_0302733c
obo:OBI_0000097c
obo:OBI_0000067c
obo:OBI_0000319c
obo:OBI_0000444c
obo:OBI_0000086c
obo:OBI_0000112c
obo:OBI_0000857c
In range of obo:RO_0000087op

sitec # Classes

URI http://purl.obolibrary.org/obo/BFO_0000029
Super-classes obo:BFO_0000141c

generically dependent continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000031
Super-classes obo:BFO_0000002c
Sub-classes obo:SO_0000001c
obo:IAO_0000030c
In domain of obo:RO_0000058op
In range of obo:RO_0000059op

functionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000034
Super-classes obo:BFO_0000016c
Sub-classes obo:OBI_0000391c
obo:OBI_0000370c
obo:OBI_0000369c
obo:OBI_0000374c
obo:OBI_0000372c
obo:OBI_0000376c
obo:OBI_0000453c
obo:OBI_0000385c
obo:OBI_0000401c
obo:OBI_0000379c
obo:OBI_0000387c
obo:OBI_0000377c
obo:OBI_0000371c
obo:OBI_0000399c
In domain of obo:RO_0000079op
In range of obo:RO_0000085op

material entityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000040
Super-classes obo:BFO_0000004c
Sub-classes obo:OBI_0002076c
obo:OBI_0000245c
obo:OBI_0302729c
obo:CL_0000000c
obo:OBI_0100051c
obo:OBI_0000997c
obo:GO_0005575c
obo:CHEBI_33250c
obo:OBI_0100026c
obo:UBERON_0000465c
obo:OBI_1110109c
obo:OBI_1110001c
obo:OBI_1110108c
obo:OBI_0000427c
obo:CHEBI_23367c
obo:OBI_1110034c
obo:IAO_0000178c
obo:OBI_0000576c
obo:UBERON_0000477c
obo:OBI_0000047c
obo:IDO_0000586c
In domain of obo:OBI_0000304op
obo:OBI_1110119op
obo:OBI_0000647op
In range of obo:OBI_1110119op

immaterial entityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000141
Super-classes obo:BFO_0000004c
Sub-classes obo:BFO_0000029c

ATPc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_15422
Super-classes obo:CHEBI_23367c

peptidec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_16670
Super-classes obo:CHEBI_33839c
Sub-classes obo:PR_000000001c

deoxyribonucleic acidc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_16991
Super-classes obo:CHEBI_33696c
Sub-classes obo:OBI_0000809c
obo:CHEBI_4705c

molecular entityc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_23367
Super-classes obo:BFO_0000040c
Sub-classes obo:CHEBI_23528c
obo:CHEBI_53526c
obo:CHEBI_28619c
obo:CHEBI_472552c
obo:CHEBI_33839c
obo:CHEBI_15422c
obo:CHEBI_50076c
obo:REO_0000280c

cytochalasinc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_23528
Super-classes obo:CHEBI_23367c

acrylamidec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_28619
Super-classes obo:CHEBI_23367c

atomc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_33250
Super-classes obo:BFO_0000040c

nucleic acidc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_33696
Super-classes obo:CHEBI_33839c
Sub-classes obo:CHEBI_33697c
obo:CHEBI_16991c

ribonucleic acidc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_33697
Super-classes obo:CHEBI_33696c

macromoleculec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_33839
Super-classes obo:CHEBI_23367c
Sub-classes obo:CHEBI_33696c
obo:CHEBI_16670c

double-stranded DNAc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_4705
Super-classes obo:CHEBI_16991c
Sub-classes obo:OBI_0000406c

5-bromo-2'-deoxyuridinec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_472552
Super-classes obo:CHEBI_23367c

chromium-51c # Classes

URI http://purl.obolibrary.org/obo/CHEBI_50076
Super-classes obo:CHEBI_23367c

tritiated thymidinec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_53526
Super-classes obo:CHEBI_23367c

fluorescence microscopyc # Classes

URI http://purl.obolibrary.org/obo/CHMO_0000087
Super-classes obo:OBI_0002119c

light microscopyc # Classes

URI http://purl.obolibrary.org/obo/CHMO_0000102
Super-classes obo:OBI_0002119c

cellc # Classes

URI http://purl.obolibrary.org/obo/CL_0000000
Super-classes obo:BFO_0000040c
Sub-classes obo:CL_0000842c
obo:CL_0000578c

cultured cellc # Classes

URI http://purl.obolibrary.org/obo/CL_0000010
Super-classes obo:CL_0000578c
(n6d93943533d34a84b8c3678390dd5edfb6c or n6d93943533d34a84b8c3678390dd5edfb7c)

B cellc # Classes

URI http://purl.obolibrary.org/obo/CL_0000236
Super-classes obo:CL_0000542c

lymphocytec # Classes

URI http://purl.obolibrary.org/obo/CL_0000542
Super-classes obo:CL_0000842c
Sub-classes obo:CL_0000236c

experimentally modified cell in vitroc # Classes

URI http://purl.obolibrary.org/obo/CL_0000578
Super-classes obo:OBI_0000047c
obo:CL_0000000c
Restrictions obo:OBI_0000312op some obo:OBI_0000094c
Sub-classes obo:CL_0000010c

mononuclear cellc # Classes

URI http://purl.obolibrary.org/obo/CL_0000842
Super-classes obo:CL_0000000c
Sub-classes obo:CL_0000542c

evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000000
Sub-classes obo:ECO_0000352c
obo:ECO_0007672c
obo:ECO_0006151c
obo:ECO_0000212c
obo:ECO_0006055c
obo:ECO_0000501c
obo:ECO_0000088c
obo:ECO_0000006c
obo:ECO_0000361c
obo:ECO_0000041c
In domain of obo:ECO_9000000op

inference from background scientific knowledgec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000001
Super-classes obo:ECO_0000205c
Sub-classes obo:ECO_0007323c
obo:ECO_0000306c

direct assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000002
Super-classes obo:ECO_0000006c
Restrictions obo:IAO_0000136op some obo:GO_0008150c
Sub-classes obo:ECO_0001111c
obo:ECO_0005019c
obo:ECO_0000003c
obo:ECO_0007004c
obo:ECO_0000164c
obo:ECO_0000337c
obo:ECO_0001557c
obo:ECO_0005502c
obo:ECO_0000324c
obo:ECO_0001559c
obo:ECO_0000268c
obo:ECO_0000168c
obo:ECO_0000335c
obo:ECO_0006263c
obo:ECO_0001549c
obo:ECO_0001115c
obo:ECO_0006192c
obo:ECO_0001120c
obo:ECO_0001123c
obo:ECO_0000134c
obo:ECO_0001556c
obo:ECO_0000178c
obo:ECO_0005803c
obo:ECO_0000100c
obo:ECO_0001562c
obo:ECO_0001109c
obo:ECO_0001565c
obo:ECO_0000020c
obo:ECO_0001548c
obo:ECO_0006255c
obo:ECO_0000314c
obo:ECO_0000183c
obo:ECO_0001552c
obo:ECO_0005800c
obo:ECO_0000021c
obo:ECO_0001546c
obo:ECO_0000334c
obo:ECO_0001547c
obo:ECO_0001134c
obo:ECO_0001561c
obo:ECO_0001027c
obo:ECO_0001553c
obo:ECO_0001554c
obo:ECO_0000181c
obo:ECO_0001555c
obo:ECO_0001533c
obo:ECO_0001550c
obo:ECO_0001016c
obo:ECO_0007307c
obo:ECO_0005593c
obo:ECO_0006272c
obo:ECO_0000005c
obo:ECO_0001551c
obo:ECO_0001574c

reconstitution assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000003
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007722c
obo:ECO_0007803c
obo:ECO_0000150c

cell fractionation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000004
Description

If using this term for Gene Ontology annotation, it would be used most typically for annotations to the cellular component ontology.

Super-classes obo:ECO_0000100c
Sub-classes obo:ECO_0007552c
obo:ECO_0006042c

enzymatic activity assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000005
Super-classes obo:ECO_0000002c
Restrictions obo:IAO_0000136op some obo:GO_0003824c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb22c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb16c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb22c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb16c)
Sub-classes obo:ECO_0007468c
obo:ECO_0000184c
obo:ECO_0001129c
obo:ECO_0005801c
obo:ECO_0001558c

experimental evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000006
Super-classes obo:ECO_0000000c
obo:IAO_0000030c
Restrictions obo:IAO_0000136op some obo:BFO_0000015c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb28c)
Sub-classes obo:ECO_0000179c
obo:ECO_0000008c
obo:ECO_0000269c
obo:ECO_0000059c
obo:ECO_0001094c
obo:ECO_0000002c
obo:ECO_0005606c
obo:ECO_0001592c
obo:ECO_0000325c
obo:ECO_0000340c
obo:ECO_0005516c
obo:ECO_0000360c
obo:ECO_0000232c
obo:ECO_0005504c
obo:ECO_0000180c
obo:ECO_0007297c
obo:ECO_0001830c
obo:ECO_0006252c
obo:ECO_0005031c
obo:ECO_0000220c

immunofluorescence evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000007
Super-classes obo:ECO_0005517c
Sub-classes obo:ECO_0005804c
obo:ECO_0007497c
obo:ECO_0005600c
obo:ECO_0005599c

expression pattern evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000008
Description

Use this evidence type when the annotation is inferred from the timing or location of expression of a gene. It may be difficult to determine whether the expression pattern truly indicates that a gene plays a role in a given process.

Super-classes obo:ECO_0000006c
Sub-classes obo:ECO_0000009c
obo:ECO_0000049c
obo:ECO_0007006c
obo:ECO_0007298c
obo:ECO_0000270c
obo:ECO_0001836c
obo:ECO_0007087c
obo:ECO_0000010c

transcript expression evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000009
Super-classes obo:ECO_0000008c
Restrictions obo:OBI_0000312op some obo:OBI_0000424c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb36c)
obo:IAO_0000136op some obo:GO_0010467c
Sub-classes obo:ECO_0000047c
obo:ECO_0000309c
obo:ECO_0000310c
obo:ECO_0001819c
obo:ECO_0000058c
obo:ECO_0007303c
obo:ECO_0000116c
obo:ECO_0000118c
obo:ECO_0000358c
obo:ECO_0000106c
obo:ECO_0000359c
obo:ECO_0000291c
obo:ECO_0000295c

protein expression evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000010
Super-classes obo:ECO_0000008c
Sub-classes obo:ECO_0007309c
obo:ECO_0000284c
obo:ECO_0000112c
obo:ECO_0000154c
obo:ECO_0000045c
obo:ECO_0000114c

genetic interaction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000011
Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0007326c
obo:ECO_0007002c
obo:ECO_0000012c
obo:ECO_0000056c
obo:ECO_0000316c
obo:ECO_0000052c

functional complementation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000012
Super-classes obo:ECO_0000011c
Sub-classes obo:ECO_0000013c
obo:ECO_0000038c
obo:ECO_0006091c
obo:ECO_0000064c
obo:ECO_0007578c

transgenic rescue experiment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000013
Super-classes obo:ECO_0000012c
Sub-classes obo:ECO_0007579c
obo:ECO_0006092c

mutant phenotype evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000015
Description

The allele that encodes the phenotype most common in a particular natural population is referred to as the wild type allele, while any other form of that allele is known as the mutant form.

Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0000174c
obo:ECO_0001113c
obo:ECO_0001038c
obo:ECO_0001042c
obo:ECO_0000016c
obo:ECO_0005027c
obo:ECO_0000019c
obo:ECO_0005512c
obo:ECO_0005529c
obo:ECO_0006098c
obo:ECO_0007325c
obo:ECO_0005509c
obo:ECO_0005515c
obo:ECO_0005514c
obo:ECO_0006100c
obo:ECO_0005528c
obo:ECO_0000054c
obo:ECO_0001024c
obo:ECO_0000292c
obo:ECO_0007000c
obo:ECO_0000018c
obo:ECO_0000176c
obo:ECO_0000042c
obo:ECO_0000315c
obo:ECO_0005513c

loss-of-function mutant phenotype evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000016
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007193c
obo:ECO_0007089c

ectopic expression evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000017
Super-classes obo:ECO_0000059c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb42c)
Sub-classes obo:ECO_0006001c
obo:ECO_0007473c
obo:ECO_0001273c

anti-sense experiment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000018
Super-classes obo:ECO_0000015c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb49c)
obo:OBI_0000312op some obo:OBI_0001672c
obo:IAO_0000136op some obo:GO_0009300c
Sub-classes obo:ECO_0006050c
obo:ECO_0007556c
obo:ECO_0001583c

RNAi evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000019
Super-classes obo:ECO_0000015c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb57c)
obo:OBI_0000312op some obo:OBI_0001672c
obo:IAO_0000136op some obo:GO_0070549c
Sub-classes obo:ECO_0007558c
obo:ECO_0006052c

protein inhibition evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000020
Super-classes obo:ECO_0000002c
Restrictions obo:IAO_0000136op some obo:GO_0048519c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb64c)
Sub-classes obo:ECO_0000184c
obo:ECO_0007707c
obo:ECO_0007785c
obo:ECO_0000341c

physical interaction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000021
Description

Molecules interacted with might include protein, nucleic acid, ion, or complex.

Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some obo:OBI_0001146c
obo:IAO_0000136op some obo:GO_0005488c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb72c)
Sub-classes obo:ECO_0006274c
obo:ECO_0000076c
obo:ECO_0001092c
obo:ECO_0000096c
obo:ECO_0007332c
obo:ECO_0000293c
obo:ECO_0001093c
obo:ECO_0001028c
obo:ECO_0006273c
obo:ECO_0006256c
obo:ECO_0000023c
obo:ECO_0001046c
obo:ECO_0006261c
obo:ECO_0000353c
obo:ECO_0001127c
obo:ECO_0006248c
obo:ECO_0000022c

co-purification evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000022
Super-classes obo:ECO_0000021c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb78c)
Sub-classes obo:ECO_0006074c
obo:ECO_0007567c

affinity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000023
Super-classes obo:ECO_0000021c
Sub-classes obo:ECO_0000136c
obo:ECO_0000024c
obo:ECO_0001824c
obo:ECO_0001825c
obo:ECO_0001110c
obo:ECO_0000040c
obo:ECO_0006264c
obo:ECO_0006075c
obo:ECO_0001045c
obo:ECO_0007384c
obo:ECO_0000079c

protein binding evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000024
Super-classes obo:ECO_0000023c
Sub-classes obo:ECO_0006270c
obo:ECO_0007008c
obo:ECO_0001108c
obo:ECO_0007373c
obo:ECO_0000025c
obo:ECO_0001601c
obo:ECO_0000142c
obo:ECO_0006076c
obo:ECO_0001112c
obo:ECO_0001033c
obo:ECO_0000085c

bait-prey hybrid interaction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000025
Description

Typically enzymes which confer resistance to antibiotics, such as Dihydrofolate reductase or Beta-lactamase, or proteins that give colorimetric or fluorescent signals are used. The Bait protein is generally the protein under study and the methods are readily adaptable to highthroughput mode.

Super-classes obo:ECO_0000024c
Sub-classes obo:ECO_0001817c
obo:ECO_0007432c
obo:ECO_0001095c
obo:ECO_0006077c
obo:ECO_0000066c
obo:ECO_0007073c
obo:ECO_0000294c
obo:ECO_0000068c

nucleic acid hybridization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000026
Description

This term has been made obsolete with the clean up of experimental genomic evidence branch.

structural similarity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000027
Description

For GO annotation, in the case of a single gene, an accession for the related gene's sequence is entered in the evidence_with field.

Super-classes obo:ECO_0000057c
Sub-classes obo:ECO_0007090c
obo:ECO_0007194c

motif similarity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000028
Super-classes obo:ECO_0000202c
Sub-classes obo:ECO_0005536c
obo:ECO_0005532c
obo:ECO_0000083c
obo:ECO_0000081c
obo:ECO_0005505c
obo:ECO_0000257c
obo:ECO_0005534c
obo:ECO_0000258c

match to InterPro member signature evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000029
Super-classes obo:ECO_0000202c
Sub-classes obo:ECO_0000260c
obo:ECO_0000259c

BLAST evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000030
Super-classes obo:ECO_0000206c
obo:ECO_0005560c
Sub-classes obo:ECO_0000032c
obo:ECO_0000031c

protein BLAST evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000031
Super-classes obo:ECO_0000208c
obo:ECO_0000030c

nucleotide BLAST evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000032
Super-classes obo:ECO_0000207c
obo:ECO_0000030c

author statement supported by traceable referencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000033
Super-classes obo:ECO_0000204c
Sub-classes obo:ECO_0007321c
obo:ECO_0006016c
obo:ECO_0000304c

author statement without traceable supportc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000034
Super-classes obo:ECO_0000204c
Sub-classes obo:ECO_0000303c
obo:ECO_0007320c

no evidence data foundc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000035
Description

An assertion of "no evidence data found" carries the assumption that a more-or-less exhaustive search has been conducted.

Super-classes obo:ECO_0000205c
Sub-classes obo:ECO_0007324c
obo:ECO_0000307c

not_recordedc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000037
Description

The evidence not_recorded appears in some legacy annotations; it should not be used for new annotations.

transient rescue experiment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000038
Super-classes obo:ECO_0000012c
Sub-classes obo:ECO_0007580c
obo:ECO_0006093c

protein assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000039

immunological assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000040
Super-classes obo:ECO_0000023c
Restrictions obo:IAO_0000136op some obo:GO_0003823c
obo:OBI_0000312op some obo:OBI_0000443c
Sub-classes obo:ECO_0007348c
obo:ECO_0007033c
obo:ECO_0001013c
obo:ECO_0006078c
obo:ECO_0001015c
obo:ECO_0001054c
obo:ECO_0007019c
obo:ECO_0001014c
obo:ECO_0007031c

similarity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000041
Super-classes obo:ECO_0000000c
Sub-classes obo:ECO_0000080c
obo:ECO_0000252c
obo:ECO_0000044c
obo:ECO_0000051c
obo:ECO_0000251c
obo:ECO_0000057c
obo:ECO_0000177c

gain-of-function mutant phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000042
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007196c
obo:ECO_0007092c

sequence similarity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000044
Description

A sequence similarity analysis may involve a gene or a gene product, and it could be based on similarity to a single other gene or to a group of other genes.

Super-classes obo:ECO_0000041c
obo:ECO_0007672c
Sub-classes obo:ECO_0000249c
obo:ECO_0000202c
obo:ECO_0000250c
obo:ECO_0000200c
obo:ECO_0000201c

spatial pattern of protein expression evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000045
Super-classes obo:ECO_0000010c
Sub-classes obo:ECO_0000283c
obo:ECO_0007312c

spatial pattern of transcript expression evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000047
Super-classes obo:ECO_0000009c
Sub-classes obo:ECO_0000289c
obo:ECO_0007317c

reporter gene assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000049
Super-classes obo:ECO_0000008c
Restrictions obo:OBI_0000312op some obo:OBI_0002082c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb99c)
obo:IAO_0000136op some obo:GO_0010467c
Sub-classes obo:ECO_0007765c
obo:ECO_0001805c
obo:ECO_0001804c
obo:ECO_0007682c
obo:ECO_0001802c
obo:ECO_0001829c
obo:ECO_0001801c
obo:ECO_0006001c
obo:ECO_0005537c
obo:ECO_0006238c
obo:ECO_0001803c
obo:ECO_0001816c

voucher specimen phenotypic analysis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000050
Super-classes obo:ECO_0000059c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb109c)
Sub-classes obo:ECO_0007197c
obo:ECO_0007093c

genetic similarity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000051
Description

A genetic similarity analysis might consider genetic markers, polymorphisms, alleles, or other characteristics sometimes considered as part of the field of traditional genetics. Although an attempt has been made to treat as distinct the concepts of "genetic", "genotypic", "genomic", and "sequence", there is considerable overlap in usage throughout the field of biology.

Super-classes obo:ECO_0000041c
Sub-classes obo:ECO_0000254c
obo:ECO_0000253c

suppressor/enhancer interaction phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000052
Super-classes obo:ECO_0000011c
Sub-classes obo:ECO_0006094c
obo:ECO_0007581c

automatically integrated combinatorial evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000053
Description

Combinatorial analyses could include experimental or computational results. Examples include: (i) large-scale experiment such as a genome-wide two-hybrid or genome-wide synthetic interactions; (ii) integration of large-scale data sets of various types; and (iii) text-based-computation, e.g. text-mining. For simple sequence comparisons, one should use the sequence similarity analysis evidence type. For microarray results alone, expression pattern analysis is appropriate; whereas, large-scale computational analysis should be used when microarray results are combined with the results of other types of large-scale experiments.

Super-classes obo:ECO_0007673c
obo:ECO_0000213c
Sub-classes obo:ECO_0007660c
obo:ECO_0007653c
obo:ECO_0007667c

double mutant phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000054
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0006095c
obo:ECO_0007582c

array experiment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000055
Description

This general 'array experiment' term should not be used - replace with the specific type of array (e.g. ECO:0000097, ECO:0000062, ECO:0000104, etc.)

epistatic interaction phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000056
Description

Epistasis' can be used in different contexts in different areas of genetics. It is sometimes used to mean 'genetic interaction', whereas other times it may be specific to mutations that block the effects of other mutations.

Super-classes obo:ECO_0000011c
Sub-classes obo:ECO_0007583c
obo:ECO_0006096c

phenotypic similarity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000057
Description

Phenotype is defined as the outcome of the expression of a genotype in a given environment. A comparison might involve whole organisms or sub-parts of organisms.

Super-classes obo:ECO_0000041c
Sub-classes obo:ECO_0000067c
obo:ECO_0000075c
obo:ECO_0000027c
obo:ECO_0000060c
obo:ECO_0007824c
obo:ECO_0000063c
obo:ECO_0007748c
obo:ECO_0000071c

expression microarray evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000058
Super-classes obo:ECO_0000009c
Restrictions obo:OBI_0000312op some obo:OBI_0001463c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb120c)
Sub-classes obo:ECO_0000275c
obo:ECO_0007301c
obo:ECO_0000062c
obo:ECO_0000104c
obo:ECO_0000097c

experimental phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000059
Description

Observable characteristic traits can be morphology, development, behavior, biochemical or physiological properties, etc.

Super-classes obo:ECO_0000006c
Restrictions obo:IAO_0000136op some obo:GO_0010467c
obo:OBI_0000312op some obo:OBI_0000966c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb128c)
Sub-classes obo:ECO_0000017c
obo:ECO_0006053c
obo:ECO_0000050c
obo:ECO_0001032c
obo:ECO_0001103c
obo:ECO_0001128c
obo:ECO_0005675c
obo:ECO_0000015c
obo:ECO_0005673c
obo:ECO_0000172c
obo:ECO_0000241c
obo:ECO_0007634c
obo:ECO_0001012c
obo:ECO_0007077c
obo:ECO_0005511c
obo:ECO_0000298c
obo:ECO_0007635c
obo:ECO_0000011c
obo:ECO_0007075c
obo:ECO_0006032c
obo:ECO_0000061c
obo:ECO_0000240c

positional similarity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000060
Super-classes obo:ECO_0000057c
Sub-classes obo:ECO_0007094c
obo:ECO_0007198c

quantitative trait analysis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000061
Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0007095c
obo:ECO_0007199c

cRNA to DNA expression microarray evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000062
Super-classes obo:ECO_0000058c
Restrictions obo:OBI_0000312op some (obo:OBI_0001463c and n6d93943533d34a84b8c3678390dd5edfb134c)
Sub-classes obo:ECO_0000276c
obo:ECO_0007300c
obo:ECO_0000101c

compositional similarity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000063
Super-classes obo:ECO_0000057c
Sub-classes obo:ECO_0007200c
obo:ECO_0007096c

functional complementation in heterologous system evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000064
Super-classes obo:ECO_0000012c
Sub-classes obo:ECO_0006097c
obo:ECO_0007584c

yeast one-hybrid evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000066
Description

The assay involves screening a library of candidate proteins for the ability bind to a target, cis-regulatory element or any other short, DNA binding sequence placed 5' to a yeast reporter gene (TAIR:TED).

Super-classes obo:ECO_0000025c
Restrictions obo:OBI_0000312op some obo:OBI_0001681c
obo:IAO_0000136op some obo:GO_0043565c
Sub-classes obo:ECO_0007568c
obo:ECO_0006079c

developmental similarity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000067
Super-classes obo:ECO_0000057c
Sub-classes obo:ECO_0007097c
obo:ECO_0007201c

yeast 2-hybrid evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000068
Super-classes obo:ECO_0000025c
Restrictions obo:OBI_0000312op some obo:OBI_0001679c
obo:IAO_0000136op some obo:GO_0019904c
Sub-classes obo:ECO_0007531c
obo:ECO_0005805c

differential methylation hybridization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000069
Description

Color is indicative of methylation status - be it hypo- (pseudo-green), hyper- (pseudo-red), or equal methylation (pseudo-yellow).

Super-classes obo:ECO_0001065c
Restrictions obo:IAO_0000136op some obo:GO_0044030c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb145c)
obo:OBI_0000312op some obo:OBI_0001861c
Sub-classes obo:ECO_0000274c
obo:ECO_0007302c

co-immunoprecipitation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000070
Description

If performing GO annotation, the interacting protein is referenced in the evidence_with column.

Super-classes obo:ECO_0000085c
Sub-classes obo:ECO_0006030c
obo:ECO_0007546c

morphological similarity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000071
Super-classes obo:ECO_0000057c
Sub-classes obo:ECO_0007202c
obo:ECO_0007098c

Sos-recruitment assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000072

experimental genomic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000073
Description

This term has been made obsolete with the clean up of experimental genomic evidence branch.

split-ubiquitin functional complementation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000074
Description

The bait protein is fused to the C-terminal ubiquitin (Cub) domain followed by a reporter protein, and the prey protein is fused to a mutated N terminal ubiquitin (NubG) domain. If bait and prey interact, their interaction brings the NubG and Cub domains close enough to reconstitute.TAIR:TED

Super-classes obo:ECO_0006256c
Restrictions obo:OBI_0000312op some obo:OBI_0001668c
obo:IAO_0000136op some obo:GO_0019904c
Sub-classes obo:ECO_0006080c
obo:ECO_0007569c

gene expression similarity evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000075
Super-classes obo:ECO_0000057c
Sub-classes obo:ECO_0007203c
obo:ECO_0007099c

far-Western blotting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000076
Description

The interacting protein is referenced in the evidence_with column.

Super-classes obo:ECO_0000021c
Restrictions obo:OBI_0000312op some obo:OBI_0001669c
Sub-classes obo:ECO_0007570c
obo:ECO_0006081c

methylation-specific polymerase chain reaction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000077
Description

The product is the amplification of existing sequences - i.e. more DNA that can be further processed e.g. sequenced, DNA fingerprinting.

Super-classes obo:ECO_0001065c
Restrictions obo:OBI_0000312op some obo:OBI_0001684c
obo:IAO_0000136op some obo:GO_0006306c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb156c)
Sub-classes obo:ECO_0007204c
obo:ECO_0007100c

southern hybridization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000078
Description

The DNA fragments are prepared through gel electrophoresis then transferred to a filter membrane.

Super-classes obo:ECO_0005519c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb167c)
obo:OBI_0000312op some obo:OBI_0000892c
Sub-classes obo:ECO_0007101c
obo:ECO_0007205c

affinity chromatography evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000079
Description

"Used when an annotation is made based on affinity chromatography, which is a selective separation technique by which a compound (e.g., an antibody) is immobilized on a polymeric matrix and used to bind selectively other compounds. Following removal of the unattached components, the bound compound is displaced by changing the concentration of protons, salts, or cofactors in the eluent" (from original definition by TAIR:TED). Types of highly specific interaction might include those of antigen and antibody, enzyme and substrate, or receptor and ligand.

Super-classes obo:ECO_0000023c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb174c)
obo:OBI_0000312op some obo:OBI_0001630c
Sub-classes obo:ECO_0006082c
obo:ECO_0007571c

phylogenetic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000080
Super-classes obo:ECO_0000041c
Sub-classes obo:ECO_0007826c
obo:ECO_0007750c
obo:ECO_0000216c
obo:ECO_0000215c
obo:ECO_0000355c
obo:ECO_0000308c
obo:ECO_0000214c

targeting sequence prediction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000081
Super-classes obo:ECO_0000028c
Sub-classes obo:ECO_0000262c
obo:ECO_0000261c

polymerase chain reaction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000082
Description

This term has been made obsolete because PCR is not evidence. The children have been appropriately placed under other parents.

transmembrane domain prediction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000083
Super-classes obo:ECO_0000028c
Sub-classes obo:ECO_0000263c
obo:ECO_0000264c

gene neighbors evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000084
Description

Genomic cluster analyses include synteny and operon structure.

Super-classes obo:ECO_0000177c
Sub-classes obo:ECO_0007333c
obo:ECO_0000354c

immunoprecipitation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000085
Description

Transcription factors isolated in this way can be incubated with a radiolabeled probe to demonstrate binding.

Super-classes obo:ECO_0000024c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb185c)
obo:OBI_0000312op some obo:OBI_0001700c
obo:IAO_0000136op some obo:GO_0003823c
Sub-classes obo:ECO_0005644c
obo:ECO_0007503c
obo:ECO_0000070c
obo:ECO_0000226c

amplification of intermethylated sites evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000086
Description

The bands can be individually isolated and characterized which leads to the identification of hypo- and hypermethylation events.

Super-classes obo:ECO_0001065c
Restrictions obo:IAO_0000136op some obo:GO_0006306c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb192c)
obo:OBI_0000312op some obo:OBI_0001685c
Sub-classes obo:ECO_0007102c
obo:ECO_0007206c

immunolocalization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000087
Super-classes obo:ECO_0005593c
obo:ECO_0001098c
Restrictions obo:OBI_0000312op some (obo:OBI_0000185c and obo:OBI_0001632c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb203c)
obo:OBI_0000312op some (obo:OBI_0000185c and obo:OBI_0001632c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb203c)
obo:IAO_0000136op some obo:GO_0033036c
Sub-classes obo:ECO_0005594c
obo:ECO_0007486c
obo:ECO_0006031c
obo:ECO_0000092c
obo:ECO_0000300c
obo:ECO_0000090c
obo:ECO_0000301c

biological system reconstruction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000088
Description

The biological system in question might be a multi-step process or pathway or a physical complex comprising several components. The components in the experimental evidence can come from the same species or a mix of species. The experimental evidences may be only partial or weak.

Super-classes obo:ECO_0000000c
Sub-classes obo:ECO_0007746c
obo:ECO_0005551c
obo:ECO_0007827c
obo:ECO_0005548c
obo:ECO_0005549c

restriction landmark genomic scanning evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000089
Super-classes obo:ECO_0005519c
Sub-classes obo:ECO_0007470c
obo:ECO_0001270c

immunogold labelling evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000090
Super-classes obo:ECO_0000087c
Sub-classes obo:ECO_0005591c
obo:ECO_0005579c
obo:ECO_0007485c

epitope-tagged protein immunolocalization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000092
Super-classes obo:ECO_0000087c
Sub-classes obo:ECO_0007103c
obo:ECO_0007207c

array-based sequence capture evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000093
Super-classes obo:ECO_0005519c
Restrictions obo:OBI_0000312op some (obo:OBI_0001985c and n6d93943533d34a84b8c3678390dd5edfb217c)
Sub-classes obo:ECO_0000278c
obo:ECO_0007305c

biological assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000094
Description

The children of 'biological assay evidence' have been moved under 'direct assay evidence', and this term has been deprecated with no children left.

cell growth regulation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000095
Description

Cell growth aspects can include growth rate and extent of growth. A cell growth curve acts as a natural reporter.

Super-classes obo:ECO_0001563c
Restrictions obo:OBI_0000312op some obo:OBI_0000964c
Sub-classes obo:ECO_0005639c
obo:ECO_0005638c

electrophoretic mobility shift assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000096
Description

EMSA is often used for assessing TF-binding with fluorophore labelling. Protein-nucleic acid complexes generally migrate at a slower rate than the corresponding non-bonded nucleic acid.

Super-classes obo:ECO_0000021c
Restrictions obo:OBI_0000312op some obo:OBI_0001671c
Sub-classes obo:ECO_0007474c
obo:ECO_0001807c

cDNA to DNA expression microarray evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000097
Super-classes obo:ECO_0000058c
Restrictions obo:OBI_0000312op some (obo:OBI_0001463c and n6d93943533d34a84b8c3678390dd5edfb224c)
Sub-classes obo:ECO_0000273c
obo:ECO_0005630c
obo:ECO_0000105c

obsolete in situ hybridization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000098
Description

This term has been made obsolete with the clean up of experimental genomic evidence branch.

fractionation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000100
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007534c
obo:ECO_0000102c
obo:ECO_0000156c
obo:ECO_0006005c
obo:ECO_0000004c

Affymetrix GeneChip evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000101
Super-classes obo:ECO_0000062c
Sub-classes obo:ECO_0000272c
obo:ECO_0007299c

co-fractionation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000102
Super-classes obo:ECO_0000100c
Sub-classes obo:ECO_0007104c
obo:ECO_0007208c

DNA to cDNA expression microarray evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000104
Description

REM is a 'reverse-format' microarray, where the unknown sample is immoblized to a surface and known DNA is hybridized to that.

Super-classes obo:ECO_0000058c
Restrictions obo:OBI_0000312op some (obo:OBI_0001463c and n6d93943533d34a84b8c3678390dd5edfb229c)
Sub-classes obo:ECO_0007313c
obo:ECO_0000285c

Nimblegen array evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000105
Super-classes obo:ECO_0000097c
Sub-classes obo:ECO_0000277c
obo:ECO_0007304c

northern blot evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000106
Super-classes obo:ECO_0000009c
Restrictions obo:OBI_0000312op some obo:OBI_0000860c
Sub-classes obo:ECO_0005653c
obo:ECO_0007518c

reverse transcription polymerase chain reaction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000109
Description

The starting product for PCR, and therefore amplification volume, is directly correlated to the transcription rate.

Super-classes obo:ECO_0005518c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb236c)
obo:OBI_0000312op some obo:OBI_0001361c
Sub-classes obo:ECO_0007475c
obo:ECO_0001566c
obo:ECO_0001808c

RNA protection assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000110
Super-classes obo:ECO_0001106c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb242c)
Sub-classes obo:ECO_0007315c
obo:ECO_0000288c

qualitative western immunoblotting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000112
Description

Western blot is used for protein detection and analysis. A mixed protein sample is separated through polyacrylamide gel electrophoresis then transferred to a membrane, such as polyvinylidene fluoride (PVDF), and labeled with protein-specific antibodies.

Super-classes obo:ECO_0005593c
obo:ECO_0000010c
obo:ECO_0000333c
Sub-classes obo:ECO_0007306c
obo:ECO_0000279c
obo:ECO_0006169c

expression library screen evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000114
Super-classes obo:ECO_0000010c
Sub-classes obo:ECO_0007310c
obo:ECO_0000281c

differential hybridization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000116
Description

Differential hybridization identifies differentially expressed cloned genes. Two different mRNA-derived probes are used to demonstrate RNA expression under a specific condition.

Super-classes obo:ECO_0000009c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb256c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb251c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb256c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb251c)
Sub-classes obo:ECO_0000287c
obo:ECO_0007314c

subtractive hybridization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000118
Description

Subtractive hybridization is used for isolation and identification of transcripts involving the removal of any sequences present in the control from the test probe to detect only transcripts present in the sample. The method is PCR-based for the comparison of two cDNA libraries.

Super-classes obo:ECO_0000009c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb266c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb271c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb266c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb271c)
Sub-classes obo:ECO_0007318c
obo:ECO_0000290c

over expression analysis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000120
Super-classes obo:ECO_0005027c
Sub-classes obo:ECO_0007562c
obo:ECO_0006063c

protein localization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000122
Super-classes obo:ECO_0001533c
Sub-classes obo:ECO_0007807c
obo:ECO_0007725c
obo:ECO_0000124c

fusion protein localization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000124
Super-classes obo:ECO_0000122c
Restrictions obo:OBI_0000312op some obo:OBI_0002167c
obo:IAO_0000136op some obo:GO_0033036c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb283c)
Sub-classes obo:ECO_0007726c
obo:ECO_0000132c
obo:ECO_0007808c
obo:ECO_0000128c
obo:ECO_0000130c
obo:ECO_0000126c

green fluorescent protein fusion protein localization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000126
Super-classes obo:ECO_0000124c
Sub-classes obo:ECO_0007106c
obo:ECO_0007210c

yellow fluorescent protein fusion protein localization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000128
Super-classes obo:ECO_0000124c
Sub-classes obo:ECO_0007107c
obo:ECO_0007211c

beta-glucuronidase fusion protein localization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000130
Super-classes obo:ECO_0000124c
Sub-classes obo:ECO_0007212c
obo:ECO_0007108c

beta-galactosidase fusion protein localization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000132
Super-classes obo:ECO_0000124c
Sub-classes obo:ECO_0007213c
obo:ECO_0007109c

transport assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000134
Super-classes obo:ECO_0000002c
Restrictions obo:IAO_0000136op some obo:GO_0015031c
obo:OBI_0000312op some obo:OBI_0000964c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb291c)
Sub-classes obo:ECO_0007709c
obo:ECO_0007035c
obo:ECO_0000162c
obo:ECO_0007789c

nucleic acid binding evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000136
Super-classes obo:ECO_0000023c
Restrictions obo:IAO_0000136op some (obo:GO_0005488c and n6d93943533d34a84b8c3678390dd5edfb297c)
obo:OBI_0000312op some obo:OBI_0001591c
Sub-classes obo:ECO_0001601c
obo:ECO_0001826c
obo:ECO_0001827c
obo:ECO_0006083c
obo:ECO_0006010c
obo:ECO_0001818c
obo:ECO_0001815c
obo:ECO_0007505c
obo:ECO_0001814c
obo:ECO_0000138c
obo:ECO_0000144c
obo:ECO_0000146c
obo:ECO_0001810c
obo:ECO_0006270c

ribohomopolymer binding assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000138
Super-classes obo:ECO_0000136c
Restrictions obo:IAO_0000136op some obo:GO_0032549c
Sub-classes obo:ECO_0006084c
obo:ECO_0007572c

thin layer chromatography evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000140
Super-classes obo:ECO_0000325c
Sub-classes obo:ECO_0007110c
obo:ECO_0007214c

protein:ion binding evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000142
Super-classes obo:ECO_0000024c
Restrictions obo:OBI_0000312op some obo:OBI_0001591c
obo:IAO_0000136op some (obo:GO_0005488c and n6d93943533d34a84b8c3678390dd5edfb304c)
Sub-classes obo:ECO_0007573c
obo:ECO_0006085c

Southwestern blot evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000144
Super-classes obo:ECO_0000136c
Sub-classes obo:ECO_0006086c
obo:ECO_0007574c

Northwestern blot evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000146
Super-classes obo:ECO_0000136c
Sub-classes obo:ECO_0007575c
obo:ECO_0006087c

in vitro binding evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000148

in vitro transcription reconstitution assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000150
Super-classes obo:ECO_0000003c
Restrictions obo:IAO_0000136op some obo:GO_0034645c
obo:OBI_0000312op some obo:OBI_0002622c
Sub-classes obo:ECO_0007723c
obo:ECO_0007804c
obo:ECO_0000152c

in vitro recombinant protein transcription reconstitution assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000152
Super-classes obo:ECO_0000150c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb312c)
Sub-classes obo:ECO_0007215c
obo:ECO_0007111c

heterologous protein expression evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000154
Super-classes obo:ECO_0000010c
Sub-classes obo:ECO_0007311c
obo:ECO_0000282c

protein separation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000156
Super-classes obo:ECO_0000100c
Sub-classes obo:ECO_0000158c
obo:ECO_0000160c
obo:ECO_0007684c
obo:ECO_0007787c

protein separation followed by direct sequencing evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000158
Super-classes obo:ECO_0000156c
Sub-classes obo:ECO_0007216c
obo:ECO_0007112c

protein separation followed by fragment identification evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000160
Super-classes obo:ECO_0000156c
Sub-classes obo:ECO_0007217c
obo:ECO_0007113c

heterologous system uptake evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000162
Description

The transporter is a recombinant protein.

Super-classes obo:ECO_0000134c
Sub-classes obo:ECO_0007218c
obo:ECO_0007114c

electrophysiology assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000164
Description

The scale of electrophysiology assays can range from small, e.g. a single ion channel, to large, e.g. an entire organ such as a heart.

Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some obo:OBI_0002176c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb318c)
Sub-classes obo:ECO_0006038c
obo:ECO_0006012c
obo:ECO_0005566c
obo:ECO_0006043c
obo:ECO_0005571c
obo:ECO_0006006c
obo:ECO_0005577c
obo:ECO_0005564c
obo:ECO_0007535c
obo:ECO_0005576c
obo:ECO_0005570c

two-electrode voltage clamp recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000166
Super-classes obo:ECO_0005576c
Sub-classes obo:ECO_0007115c
obo:ECO_0007219c

transcription assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000168
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007768c
obo:ECO_0001071c
obo:ECO_0007693c
obo:ECO_0000170c
obo:ECO_0001087c

transcriptional activation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000170
Super-classes obo:ECO_0000168c
Restrictions obo:IAO_0000136op some obo:GO_0001047c
obo:OBI_0000312op some (obo:OBI_0000424c and obo:OBI_0000913c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb325c)
obo:OBI_0000312op some (obo:OBI_0000424c and obo:OBI_0000913c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb325c)
Sub-classes obo:ECO_0007633c
obo:ECO_0007632c

biochemical trait analysis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000172
Description

For example, the accumulation of a biosynthetic intermediate.

Super-classes obo:ECO_0000059c
Restrictions obo:OBI_0000312op some obo:OBI_0000366c
Sub-classes obo:ECO_0007220c
obo:ECO_0007116c

mutant physiological response evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000174
Description

Examples include: abnormal growth of the root in response to gravity, delay in flowering in response to varying light conditions.

Super-classes obo:ECO_0000015c
Restrictions obo:IAO_0000136op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb345c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb350c and obo:GO_0050896c and n6d93943533d34a84b8c3678390dd5edfb336c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb345c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb350c and obo:GO_0050896c and n6d93943533d34a84b8c3678390dd5edfb336c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb345c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb350c and obo:GO_0050896c and n6d93943533d34a84b8c3678390dd5edfb336c)
Sub-classes obo:ECO_0007221c
obo:ECO_0007117c

mutant visible phenotype evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000176
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007118c
obo:ECO_0007222c

genomic context evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000177
Description

This type of evidence might include identity of neighboring genes, operon structure, synteny, phylogenetic analysis, or other whole-genome analysis.

Super-classes obo:ECO_0000041c
Sub-classes obo:ECO_0007327c
obo:ECO_0000317c
obo:ECO_0000084c

in vivo assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000178
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some obo:OBI_0000964c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb357c)
Sub-classes obo:ECO_0007119c
obo:ECO_0007223c

animal model system study evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000179
Super-classes obo:ECO_0000006c
Restrictions obo:OBI_0000312op some obo:OBI_0000966c
obo:IAO_0000136op some obo:GO_0008150c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb365c)
Sub-classes obo:ECO_0007120c
obo:ECO_0007224c

clinical study evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000180
Super-classes obo:ECO_0000006c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb371c)
Sub-classes obo:ECO_0007121c
obo:ECO_0007225c

in vitro assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000181
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb378c)
obo:OBI_0000312op some obo:OBI_0000978c
Sub-classes obo:ECO_0007122c
obo:ECO_0007226c

in vitro culture assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000182
Description

Use ECO:0001563 (cell growth assay evidence) in place of this term.

cell-free assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000183
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb386c)
obo:OBI_0000312op some obo:OBI_0000978c
obo:IAO_0000136op some obo:GO_0008152c
Sub-classes obo:ECO_0006064c
obo:ECO_0007563c

enzyme inhibition evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000184
Super-classes obo:ECO_0000020c
obo:ECO_0000005c
Sub-classes obo:ECO_0007227c
obo:ECO_0007123c

sequence alignment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000200
Description

Such alignments may be pairwise alignments or multiple alignments.

Super-classes obo:ECO_0000044c
Sub-classes obo:ECO_0000247c
obo:ECO_0005554c
obo:ECO_0000326c
obo:ECO_0005555c
obo:ECO_0000248c
obo:ECO_0000345c

sequence orthology evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000201
Description

Orthology is a relationship between genes in different species indicating that the genes derive from a common ancestor.

Super-classes obo:ECO_0000044c
Sub-classes obo:ECO_0000265c
obo:ECO_0000266c

match to sequence model evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000202
Description

Used when evidence from any kind of statistical model of a sequence or group of sequences is used to make a prediction about the function of a protein or RNA. Examples of relevant evidence are: Hidden Markov Models, PROSITE motifs, and tools such as tRNASCAN.

Super-classes obo:ECO_0000044c
Sub-classes obo:ECO_0000028c
obo:ECO_0000029c
obo:ECO_0000255c
obo:ECO_0005535c
obo:ECO_0000256c

automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000203
Description

An automatic assertion is based on computationally generated information that is not reviewed by a person prior to making the assertion. For example, one common type of automatic assertion involves creating an association of evidence with an entity based on commonness of attributes of that entity and another entity for which an assertion already exists. The commonness is determined algorithmically.

Super-classes obo:ECO_0000217c

author statementc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000204
Super-classes obo:ECO_0006151c
Sub-classes obo:ECO_0006185c
obo:ECO_0007319c
obo:ECO_0000033c
obo:ECO_0000034c
obo:ECO_0000302c

curator inferencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000205
Super-classes obo:ECO_0000361c
Sub-classes obo:ECO_0007322c
obo:ECO_0006018c
obo:ECO_0000001c
obo:ECO_0007647c
obo:ECO_0000305c
obo:ECO_0000035c

BLAST evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000206
Super-classes obo:ECO_0005554c
Sub-classes obo:ECO_0000207c
obo:ECO_0000209c
obo:ECO_0000030c
obo:ECO_0000208c

nucleotide BLAST evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000207
Super-classes obo:ECO_0000206c
Sub-classes obo:ECO_0000032c
obo:ECO_0000210c

protein BLAST evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000208
Super-classes obo:ECO_0000206c
Sub-classes obo:ECO_0000031c
obo:ECO_0000211c

BLAST evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000209
Super-classes obo:ECO_0000206c
obo:ECO_0005561c
Sub-classes obo:ECO_0000211c
obo:ECO_0000210c

nucleotide BLAST evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000210
Super-classes obo:ECO_0000209c
obo:ECO_0000207c

protein BLAST evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000211
Super-classes obo:ECO_0000208c
obo:ECO_0000209c

combinatorial evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000212
Description

A key aspect of this type of evidence is that two or more pieces of information are combined to generate an emergent type of evidence not possible with the constituent pieces of evidence alone. A combinatorial analysis typically involves incorporation of different types of evidence.

Super-classes obo:ECO_0000000c
Sub-classes obo:ECO_0007661c
obo:ECO_0007673c
obo:ECO_0007677c
obo:ECO_0007674c
obo:ECO_0007011c
obo:ECO_0007012c
obo:ECO_0000244c
obo:ECO_0000213c
obo:ECO_0007654c

combinatorial evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000213
Description

Combinatorial analyses could include experimental or computational results. Examples include: (i) large-scale experiment such as a genome-wide two-hybrid or genome-wide synthetic interactions; (ii) integration of large-scale data sets of various types; and (iii) text-based-computation, e.g. text-mining. For simple sequence comparisons, one should use the sequence similarity analysis evidence type. For microarray results alone, expression pattern analysis is appropriate; whereas, large-scale computational analysis should be used when microarray results are combined with the results of other types of large-scale experiments.

Super-classes obo:ECO_0000212c
obo:ECO_0000501c
Sub-classes obo:ECO_0000053c
obo:ECO_0007829c
obo:ECO_0007676c
obo:ECO_0007593c
obo:ECO_0007830c
obo:ECO_0007592c
obo:ECO_0007679c

biological aspect of descendant evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000214
Description

This type of evidence can be used in support of both positive and "not" GO annotations. It should be used to annotate ancestral genes but not extant ones.

Super-classes obo:ECO_0000080c
Sub-classes obo:ECO_0000319c
obo:ECO_0007329c

rapid divergence from ancestral sequence evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000215
Description

Long branch lengths indicate that descendant sequences may have acquired different or additional functions than the ancestral sequence.

Super-classes obo:ECO_0000080c
Sub-classes obo:ECO_0000321c
obo:ECO_0007331c

phylogenetic determination of loss of key residues evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000216
Description

The loss of certain residues important for function can indicate that a sequence lacks a particular function.

Super-classes obo:ECO_0000080c
Sub-classes obo:ECO_0000320c
obo:ECO_0007330c

assertion methodc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000217
Sub-classes obo:ECO_0000218c
obo:ECO_0000203c
In range of obo:ECO_9000000op

manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000218
Description

A manual assertion could be based on evidence that is generated by and interpreted by a human or it could involve human review of computationally generated information.

Super-classes obo:ECO_0000217c

nucleotide sequencing assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000219
Super-classes obo:ECO_0000220c
Sub-classes obo:ECO_0007813c
obo:ECO_0001820c
obo:ECO_0001598c
obo:ECO_0000221c
obo:ECO_0000225c
obo:ECO_0007733c

sequencing assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000220
Super-classes obo:ECO_0000006c
Sub-classes obo:ECO_0007732c
obo:ECO_0007812c
obo:ECO_0000219c
obo:ECO_0001118c

high throughput nucleotide sequencing assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000221
Description

Typically thousands to millions of reads are produced in parallel.

Super-classes obo:ECO_0000219c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb419c)
obo:OBI_0000312op some obo:OBI_0001247c
Sub-classes obo:ECO_0000222c
obo:ECO_0000224c
obo:ECO_0007734c
obo:ECO_0000223c
obo:ECO_0007814c

Illumina sequencing evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000222
Description

In Illumina sequencing technology, adapters are ligated onto the ends of randomly fragmented DNA. After single-stranded fragments are bound to the inside surface of a flow cell channel, they undergo in-place bridge PCR amplification. To begin the sequencing cycle, labeled reversible terminators, primers and DNA polymerase are added, followed by laser excitation of the fluorescent label and high resolution scanning. After non-incorporated nucleotides are washed away and the dye is chemically removed, the next cycle repeats with four labeled reversible terminators, primers and DNA polymerase, again followed by imaging.

Super-classes obo:ECO_0000221c
Sub-classes obo:ECO_0007229c
obo:ECO_0007125c

454 pyrosequencing evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000223
Description

454 pyrosequencing technology amplifies individual DNA fragments inside water droplets within an oil solution (emulsion PCR). Within each droplet, a single DNA template is attached to a single primer-coated bead. Each bead is subsequently captured in a picolitre well within the sequencing machine. A luciferase-based readout system is used to identify individual nucleotides added to the nascent DNA.

The target strand is usually prepared by fragmentation, adaptor ligation, and amplification by emulsion PCR.

Super-classes obo:ECO_0000221c
Sub-classes obo:ECO_0007126c
obo:ECO_0007230c

SOLiD sequencing evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000224
Description

SOLiD sequencing technology is based on sequencing by ligation. After library preparation, emulsion PCR and bead enrichment are performed, including 3' modification of templates on selected beads to allow covalent bonding to a slide. 3' modified beads are attached to a glass slide and primers are added. Four fluorescently labeled di-base probes are added and multiple cycles of ligation, detection and cleavage are performed. The number of cycles determines read length. After a number of ligation cycles, the extension product is removed and another round of ligation cycles is performed with a new primer complimentary to the n-1 position of the template. Five rounds of primer reset are performed for each sequence tag.

Samples are prepared by fragmentation of a sample library, adaptor ligation, emulsion PCR, and attachment of resultant beads to glass slides.

Super-classes obo:ECO_0000221c
Sub-classes obo:ECO_0007231c
obo:ECO_0007127c

chain termination sequencing evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000225
Description

Chain termination sequencing, also called Sanger sequencing after its developer, uses dideoxynucleotide triphosphates (ddNTPs) as DNA chain terminators. Single-stranded DNA template, DNA primer, DNA polymerase, fluorescently or radioactively labeled nucleotides, and one of four ddNTPs are added together in each of four separate sequencing reactions. The synthesized and labeled DNA fragments from each of the four reactions are denatured, separated by size by gel electrophoresis, and visualized by autoradiography or UV light.

The ddNTPs lack an OH group so the next dNTP cannot be attached, causing chain termination.

Super-classes obo:ECO_0000219c
Sub-classes obo:ECO_0007128c
obo:ECO_0007232c

chromatin immunoprecipitation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000226
Description

Chromatin immunoprecipitation (ChIP) is used to investigate protein-DNA interactions in vivo. DNA and proteins are chemically cross-linked in vivo to form chromatin complexes, followed by cell lysis and DNA shearing. Fragmented DNA-protein complexes are selectively enriched for a protein of interest using a specific antibody (immunoprecipitation). Protein digestion and DNA purification are performed prior to DNA detection via molecular cloning and sequencing, polymerase chain reaction (PCR), microarray analysis (ChIP-on-chip), or direct high-throughput sequencing (ChIP-seq).

Super-classes obo:ECO_0000085c
Restrictions obo:IAO_0000136op some obo:GO_0043565c
obo:OBI_0000312op some obo:OBI_0001956c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb427c)
Sub-classes obo:ECO_0007786c
obo:ECO_0001806c
obo:ECO_0007706c
obo:ECO_0000228c
obo:ECO_0000229c
obo:ECO_0000227c
obo:ECO_0000230c

chromatin immunoprecipitation-PCR evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000227
Description

ChIP-PCR is often used to validate ChIP-chip results and less frequently,ChIP-Seq results.

Super-classes obo:ECO_0000226c
Sub-classes obo:ECO_0005620c
obo:ECO_0007502c

chromatin immunoprecipitation-qPCR evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000228
Super-classes obo:ECO_0000226c
Restrictions obo:OBI_0000312op some obo:OBI_0002169c
Sub-classes obo:ECO_0007129c
obo:ECO_0007233c

chromatin immunoprecipitation-seq evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000229
Description

ChIP-Seq experiments often use the input as a control to eliminate biases. To obtain similar results, ChIP-chip with high-density tiling arrays can be used.

Super-classes obo:ECO_0000226c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb435c)
obo:OBI_0000312op some obo:OBI_0000716c
Sub-classes obo:ECO_0005621c
obo:ECO_0006009c

chromatin immunoprecipitation-chip evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000230
Description

A fixating agent such as formaldehyde is used to cross link proteins and DNA. Sonication is applied for DNA shearing. For transcription factor tagging, an antibody or epitope is employed. After cross-linking is reversed, the DNA is amplified and labeled with a flourophore for microarray which produces a resolution of aproximately 500 bp.

Super-classes obo:ECO_0000226c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb442c)
obo:OBI_0000312op some obo:OBI_0001248c
Sub-classes obo:ECO_0006007c
obo:ECO_0005618c

quantitative polymerase chain reaction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000231
Description

Quantitative PCR enables both detection and quantification (as absolute number of copies or relative amount when normalized to DNA input or additional normalizing genes) of one or more specific sequences in a DNA sample. The dye is activated upon binding double-stranded DNA.

Although qRT-PCR is commonly found in literature synonymous to qPCR, it is preferable not to use this synonym as it is the accepted abbreviation for reverse transcription PCR. qPCR should be used instead (ISBN 978-0-470-68386-6 page 173).

qPCR can be used to quantitatively determine levels of gene expression.

Super-classes obo:ECO_0005519c
Restrictions obo:OBI_0000312op some obo:OBI_0000893c
Sub-classes obo:ECO_0007521c
obo:ECO_0005660c

chromosome conformation-based evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000232
Description

Chromosome conformation capture technologies are used to study the structural properties and spatial organization of chromosomes inside cells. All types of chromosome conformation capture technology involve five primary steps: cross-linking of DNA in vivo, restriction digestion, intramolecular ligation, reversing cross-linkages, and DNA enrichment and quantitation. The last step is different for each type of chromosome conformation capture technology, and may include PCR (3C), inverse PCR (4C), or ligation-mediated amplification (5C). Methods for product quantitation can include agarose gel detection or real-time quantitative PCR in the case of 3C, or high-throughput sequencing or microarray analysis for 4C and 5C.

Super-classes obo:ECO_0000006c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb450c)
obo:OBI_0000312op some obo:OBI_0002438c
Sub-classes obo:ECO_0000238c
obo:ECO_0000233c
obo:ECO_0000235c
obo:ECO_0000234c
obo:ECO_0007741c
obo:ECO_0007822c
obo:ECO_0000239c

3C evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000233
Description

3C is used to study the structural properties and spatial organization of chromosomes inside cells. Like other types of chromosome conformation capture technology, 3C differs only in the fifth step, which involves performing either standard polymerase chain reaction (PCR) or quantitative PCR (qPCR) for product quantitation.

Super-classes obo:ECO_0000232c
Restrictions obo:OBI_0000312op some obo:OBI_0002439c
Sub-classes obo:ECO_0007823c
obo:ECO_0000237c
obo:ECO_0007742c

4C evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000234
Description

4C is used to study the structural properties and spatial organization of chromosomes inside cells. Like other types of chromosome conformation capture technology, 4C differs only in the fifth step, which involves inverse polymerase chain reaction (inverse PCR) on a circularized 3C library prior to product quantitation.

Super-classes obo:ECO_0000232c
Sub-classes obo:ECO_0007234c
obo:ECO_0007130c

5C evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000235
Description

5C is used to study the structural properties and spatial organization of chromosomes inside cells. Like other types of chromosome conformation capture technology, 5C differs only in the fifth step, which involves ligation-mediated amplification (LMA) followed by product quantitation.

Super-classes obo:ECO_0000232c
Restrictions obo:OBI_0000312op some obo:OBI_0001919c
Sub-classes obo:ECO_0007235c
obo:ECO_0007131c

chromosome conformation capture-PCR evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000236
Description

See 3C evidence. 3C evidence was initially developed using PCR.

3C-qPCR evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000237
Super-classes obo:ECO_0000233c
Restrictions obo:OBI_0000312op some (obo:OBI_0000893c and obo:OBI_0002439c)
Sub-classes obo:ECO_0007237c
obo:ECO_0007133c

Hi-C evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000238
Description

Hi-C is used to study the structural properties and spatial organization of chromosomes inside cells. Hi-C is similar to other types of chromosome conformation capture technology, but involves the addition of biotinylated nucleotides during the second or fourth step and enrichment for ligated fragments using immunoprecipitation after the fourth step.

Super-classes obo:ECO_0000232c
Restrictions obo:OBI_0000312op some obo:OBI_0002440c
Sub-classes obo:ECO_0007134c
obo:ECO_0007238c

3C-seq evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000239
Description

3C-seq is used to study the structural properties and spatial organization of chromosomes inside cells. Like other types of chromosome conformation capture technology, 3C-seq differs only in the fifth step, which involves inverse polymerase chain reaction (PCR) on a circularized 3C library prior to product quantitation.

Super-classes obo:ECO_0000232c
Sub-classes obo:ECO_0007239c
obo:ECO_0007135c

anatomical perturbation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000240
Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0007810c
obo:ECO_0001137c
obo:ECO_0000242c
obo:ECO_0007728c
obo:ECO_0000243c
obo:ECO_0001009c

environmental perturbation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000241
Description

Many environmental factors are subject to modification, such as temperature, pressure, humidity, radiation, and so forth.

Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0007240c
obo:ECO_0007136c

tissue ablation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000242
Super-classes obo:ECO_0000240c
Sub-classes obo:ECO_0007137c
obo:ECO_0007241c

tissue grafting phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000243
Super-classes obo:ECO_0000240c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb467c)
Sub-classes obo:ECO_0007138c
obo:ECO_0007242c

combinatorial evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000244
Description

Combinatorial analyses could include experimental or computational results. Examples include: (i) large-scale experiment such as a genome-wide two-hybrid or genome-wide synthetic interactions; (ii) integration of large-scale data sets of various types; and (iii) text-based-computation, e.g. text-mining. For simple sequence comparisons, one should use the sequence similarity analysis evidence type. For microarray results alone, expression pattern analysis is appropriate; whereas, large-scale computational analysis should be used when microarray results are combined with the results of other types of large-scale experiments.

Super-classes obo:ECO_0000352c
obo:ECO_0000212c
Sub-classes obo:ECO_0007678c
obo:ECO_0007675c
obo:ECO_0007745c
obo:ECO_0007014c
obo:ECO_0007744c
obo:ECO_0000245c
obo:ECO_0007013c

automatically integrated combinatorial evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000245
Super-classes obo:ECO_0007673c
obo:ECO_0000244c
Sub-classes obo:ECO_0007659c
obo:ECO_0007666c
obo:ECO_0007652c

computational combinatorial evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000246
Description

Merged with ECO:0000053.

sequence alignment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000247
Super-classes obo:ECO_0000200c
obo:ECO_0000250c
Sub-classes obo:ECO_0007152c
obo:ECO_0000329c
obo:ECO_0005560c
obo:ECO_0007749c
obo:ECO_0005556c
obo:ECO_0000330c

sequence alignment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000248
Super-classes obo:ECO_0000249c
obo:ECO_0000200c
Sub-classes obo:ECO_0007825c
obo:ECO_0005557c
obo:ECO_0005561c
obo:ECO_0007256c

sequence similarity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000249
Super-classes obo:ECO_0000044c
obo:ECO_0000251c
obo:ECO_0007669c
Sub-classes obo:ECO_0000248c
obo:ECO_0000256c
obo:ECO_0000265c

sequence similarity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000250
Super-classes obo:ECO_0000252c
obo:ECO_0000044c
obo:ECO_0007668c
Sub-classes obo:ECO_0000255c
obo:ECO_0000247c
obo:ECO_0000266c

similarity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000251
Super-classes obo:ECO_0000501c
obo:ECO_0000041c
Sub-classes obo:ECO_0007824c
obo:ECO_0000254c
obo:ECO_0007826c
obo:ECO_0000249c
obo:ECO_0007327c

similarity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000252
Super-classes obo:ECO_0000041c
obo:ECO_0000352c
Sub-classes obo:ECO_0000318c
obo:ECO_0007750c
obo:ECO_0007094c
obo:ECO_0000250c
obo:ECO_0007748c
obo:ECO_0007153c
obo:ECO_0000317c
obo:ECO_0007090c
obo:ECO_0000253c
obo:ECO_0000319c
obo:ECO_0007097c
obo:ECO_0007099c
obo:ECO_0007096c
obo:ECO_0000321c
obo:ECO_0000320c
obo:ECO_0007098c

genetic similarity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000253
Super-classes obo:ECO_0000252c
obo:ECO_0000051c

genetic similarity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000254
Super-classes obo:ECO_0000251c
obo:ECO_0000051c

match to sequence model evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000255
Super-classes obo:ECO_0000202c
obo:ECO_0000250c
Sub-classes obo:ECO_0000260c
obo:ECO_0005649c
obo:ECO_0000257c

match to sequence model evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000256
Super-classes obo:ECO_0000202c
obo:ECO_0000249c
Sub-classes obo:ECO_0000259c
obo:ECO_0005650c
obo:ECO_0000258c

motif similarity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000257
Super-classes obo:ECO_0000028c
obo:ECO_0000255c
Sub-classes obo:ECO_0005658c
obo:ECO_0000262c
obo:ECO_0005662c
obo:ECO_0005624c
obo:ECO_0000264c
obo:ECO_0005622c

motif similarity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000258
Super-classes obo:ECO_0000256c
obo:ECO_0000028c
Sub-classes obo:ECO_0005623c
obo:ECO_0000261c
obo:ECO_0005659c
obo:ECO_0005625c
obo:ECO_0000263c
obo:ECO_0005663c

match to InterPro member signature evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000259
Super-classes obo:ECO_0000256c
obo:ECO_0000029c

match to InterPro member signature evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000260
Super-classes obo:ECO_0000029c
obo:ECO_0000255c

targeting sequence prediction evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000261
Super-classes obo:ECO_0000258c
obo:ECO_0000081c

targeting sequence prediction evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000262
Super-classes obo:ECO_0000257c
obo:ECO_0000081c

transmembrane domain prediction evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000263
Super-classes obo:ECO_0000083c
obo:ECO_0000258c

transmembrane domain prediction evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000264
Super-classes obo:ECO_0000083c
obo:ECO_0000257c

sequence orthology evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000265
Super-classes obo:ECO_0000201c
obo:ECO_0000249c

sequence orthology evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000266
Super-classes obo:ECO_0000250c
obo:ECO_0000201c

enzyme-linked immunoabsorbent assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000267
Description

ELISA is sometimes used in the study of transcriptional regulation to identify a produced protein, especially secreted protein.

Super-classes obo:ECO_0005517c
Sub-classes obo:ECO_0005581c
obo:ECO_0007488c

flow cytometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000268
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb561c)
obo:OBI_0000312op some obo:OBI_0000916c
Sub-classes obo:ECO_0005580c
obo:ECO_0007487c

experimental evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000269
Super-classes obo:ECO_0000006c
obo:ECO_0000352c
Sub-classes obo:ECO_0007121c
obo:ECO_0005802c
obo:ECO_0007131c
obo:ECO_0001043c
obo:ECO_0007742c
obo:ECO_0007634c
obo:ECO_0005523c
obo:ECO_0006200c
obo:ECO_0005661c
obo:ECO_0007737c
obo:ECO_0007134c
obo:ECO_0007062c
obo:ECO_0005527c
obo:ECO_0007120c
obo:ECO_0007133c
obo:ECO_0007135c
obo:ECO_0007732c
obo:ECO_0001257c
obo:ECO_0006311c
obo:ECO_0007738c
obo:ECO_0001252c
obo:ECO_0007101c
obo:ECO_0001186c
obo:ECO_0007731c
obo:ECO_0007735c
obo:ECO_0001808c
obo:ECO_0007734c
obo:ECO_0000314c
obo:ECO_0007156c
obo:ECO_0001258c
obo:ECO_0001240c
obo:ECO_0006212c
obo:ECO_0007736c
obo:ECO_0001236c
obo:ECO_0001250c
obo:ECO_0001600c
obo:ECO_0001251c
obo:ECO_0006275c
obo:ECO_0001230c
obo:ECO_0006285c
obo:ECO_0007125c
obo:ECO_0005660c
obo:ECO_0007130c
obo:ECO_0005581c
obo:ECO_0001189c
obo:ECO_0005804c
obo:ECO_0001171c
obo:ECO_0001255c
obo:ECO_0001228c
obo:ECO_0007126c
obo:ECO_0007733c
obo:ECO_0007680c
obo:ECO_0000278c
obo:ECO_0007127c
obo:ECO_0001594c
obo:ECO_0005645c
obo:ECO_0001832c
obo:ECO_0000270c
obo:ECO_0007128c
obo:ECO_0007741c
obo:ECO_0001177c
obo:ECO_0007739c
obo:ECO_0001160c
obo:ECO_0007740c
obo:ECO_0007150c
obo:ECO_0001270c

expression pattern evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000270
Super-classes obo:ECO_0000008c
obo:ECO_0000269c
Sub-classes obo:ECO_0006241c
obo:ECO_0005616c
obo:ECO_0000291c
obo:ECO_0007682c
obo:ECO_0005636c
obo:ECO_0006002c
obo:ECO_0005672c
obo:ECO_0000284c
obo:ECO_0007088c
obo:ECO_0005633c
obo:ECO_0005641c
obo:ECO_0005648c
obo:ECO_0001838c
obo:ECO_0005615c
obo:ECO_0007007c
obo:ECO_0005617c

array experiment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000271
Description

This general 'array experiment' term should not be used - replace with the specific type of array (e.g. ECO:0000273, ECO:0000276, ECO:0000285, etc.)

Affymetrix GeneChip evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000272
Super-classes obo:ECO_0000101c
obo:ECO_0000276c

cDNA to DNA expression microarray evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000273
Super-classes obo:ECO_0000275c
obo:ECO_0000097c
Sub-classes obo:ECO_0000277c

differential methylation hybridization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000274
Super-classes obo:ECO_0000069c
obo:ECO_0001198c

expression microarray evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000275
Super-classes obo:ECO_0000058c
obo:ECO_0000291c
Sub-classes obo:ECO_0000273c
obo:ECO_0000285c
obo:ECO_0000276c

cRNA to DNA expression microarray evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000276
Super-classes obo:ECO_0000275c
obo:ECO_0000062c
Sub-classes obo:ECO_0000272c

Nimblegen array evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000277
Super-classes obo:ECO_0000105c
obo:ECO_0000273c

array-based sequence capture evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000278
Super-classes obo:ECO_0000093c
obo:ECO_0000269c

qualitative western immunoblotting evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000279
Super-classes obo:ECO_0000314c
obo:ECO_0000112c
obo:ECO_0000284c
Sub-classes obo:ECO_0006170c

expression library screen evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000281
Super-classes obo:ECO_0000284c
obo:ECO_0000114c

heterologous protein expression evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000282
Super-classes obo:ECO_0000284c
obo:ECO_0000154c

spatial pattern of protein expression evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000283
Super-classes obo:ECO_0000045c
obo:ECO_0000284c

protein expression evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000284
Super-classes obo:ECO_0000010c
obo:ECO_0000270c
Sub-classes obo:ECO_0000281c
obo:ECO_0000282c
obo:ECO_0000283c
obo:ECO_0000279c

DNA to cDNA expression microarray evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000285
Super-classes obo:ECO_0000275c
obo:ECO_0000104c

differential hybridization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000287
Super-classes obo:ECO_0000116c
obo:ECO_0000291c

RNA protection assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000288
Super-classes obo:ECO_0001240c
obo:ECO_0000110c

spatial pattern of transcript expression evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000289
Super-classes obo:ECO_0000047c
obo:ECO_0000291c

subtractive hybridization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000290
Super-classes obo:ECO_0000291c
obo:ECO_0000118c

transcript expression evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000291
Super-classes obo:ECO_0000270c
obo:ECO_0000009c
Sub-classes obo:ECO_0005653c
obo:ECO_0000290c
obo:ECO_0000275c
obo:ECO_0007144c
obo:ECO_0007145c
obo:ECO_0006068c
obo:ECO_0005657c
obo:ECO_0000289c
obo:ECO_0007155c
obo:ECO_0007154c
obo:ECO_0000287c

morpholino experiment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000292
Description

Morpholino oligonucleotides modify gene expression by blocking access of other molecules to specific, approximately 25-base-long regions of the base-pairing surfaces of ribonucleic acid (RNA). To achieve this anti-sense knockdown technique, delivery of the morpholino can be achieved via microinjection, electroporation, or another method.

Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007557c
obo:ECO_0006051c

systematic evolution of ligands by exponential amplification evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000293
Description

SELEX begins with the synthesis of a large oligonucleotide library, either single-stranded DNA or RNA, which consists of random fixed-length sequences flanked by constant 5' and 3' ends that serve as primers. The library is exposed to a target ligand, typically a protein or small organic compound. Unbound sequences are removed, typically with affinity chromatography. Bound sequences are eluted and the nucleic acid is extracted, followed by PCR amplification (RNA is first reverse transcribed). PCR product is converted to single stranded (DNA) or transcribed (RNA). Oligonucleotides are bound to the ligand again and the process is repeated with increasing elution stringency. After several rounds of the process, recovered oligonucleotides are sequenced and analyzed to reveal the binding specificity of the protein.

Super-classes obo:ECO_0000021c
Sub-classes obo:ECO_0006088c
obo:ECO_0007510c
obo:ECO_0001812c

bacterial one-hybrid evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000294
Description

Bacterial one-hybrid assay is a method for screening a library of candidate proteins (prey plasmid) for the ability to bind to a target, cis-regulatory element or any other short, DNA binding sequence placed 5' to reporter genes (bait plasmid). Transformation of a bacterial host with two different plasmids is required: One is designed to express the "bait". The other plasmid contains a "prey" which, if bound to by the chimeric fusion product, drives expression of downstream reporter genes.

Super-classes obo:ECO_0000025c
Restrictions obo:IAO_0000136op some obo:GO_0043565c
obo:OBI_0000312op some obo:OBI_0001682c
Sub-classes obo:ECO_0007576c
obo:ECO_0006089c

RNA-sequencing evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000295
Description

Total RNA is isolated from cells and mRNA is purified by targeting the 3' polyadenylated (poly(A)) tail with poly(T) oligos covalently attached to a substrate. Next, cDNA fragments are generated either by hydrolysis of RNA into 200-300 base oligonucleotides, preceded by reverse transcription, or by reverse transcription initiated by random primers. The cDNA second strand is synthesized, fragments are adapter ligated and high-throughput sequencing is performed by Roche 454, Illumina, ABI-SOLiD, or another HT sequencing technology. Resulting sort reads are aligned against a reference genome, and downstream analysis is performed.

Super-classes obo:ECO_0000009c
Restrictions obo:OBI_0000312op some obo:OBI_0001271c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb654c)
Sub-classes obo:ECO_0006239c
obo:ECO_0006069c
obo:ECO_0006068c
obo:ECO_0001560c
obo:ECO_0000342c

cleavage arrested development evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000298
Description

In the embryos of some organisms, inhibition of cytokinesis blocks neither the cell cycle nor the unfolding of the developmental program. As such, embryonic morphology can be frozen, allowing analysis of the developmental fate of each cell present at the time of cleavage arrest.

Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0007730c
obo:ECO_0000299c
obo:ECO_0007811c

cytochalasin experiment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000299
Description

Cytochalasin inhibits cytokinesis by blocking the formation of contractile microfilaments.

Super-classes obo:ECO_0000298c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb667c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb662c)
obo:OBI_0000312op some obo:OBI_0001689c
obo:IAO_0000136op some obo:GO_0072749c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb667c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb662c)
Sub-classes obo:ECO_0007141c
obo:ECO_0007245c

green fluorescent protein immunolocalization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000300
Description

This term describes immunolocalization of the protein; to describe transcriptional activation, use the term "localization of green fluorescent protein transcript".

Super-classes obo:ECO_0000087c
Sub-classes obo:ECO_0007142c
obo:ECO_0007246c

beta-galactosidase protein immunolocalization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000301
Description

This term describes immunolocalization of the protein; to describe transcriptional activation, use the term "localization of LacZ transcript".

Super-classes obo:ECO_0000087c
Sub-classes obo:ECO_0007247c
obo:ECO_0007143c

author statement used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000302
Super-classes obo:ECO_0006155c
obo:ECO_0000204c
Sub-classes obo:ECO_0000304c
obo:ECO_0000303c
obo:ECO_0006216c

author statement without traceable support used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000303
Super-classes obo:ECO_0000302c
obo:ECO_0000034c

author statement supported by traceable reference used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000304
Super-classes obo:ECO_0000302c
obo:ECO_0000033c
Sub-classes obo:ECO_0006017c

curator inference used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000305
Super-classes obo:ECO_0007751c
obo:ECO_0000205c
Sub-classes obo:ECO_0006019c
obo:ECO_0000307c
obo:ECO_0007752c
obo:ECO_0000306c

inference from background scientific knowledge used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000306
Super-classes obo:ECO_0000001c
obo:ECO_0000305c

no evidence data found used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000307
Super-classes obo:ECO_0000305c
obo:ECO_0000035c

biological aspect of ancestor evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000308
Description

First, a characteristic of the most recent common ancestor (MRCA) is inferred from experimental evidence in descendants; this is followed by inferring a characteristic of a descendant of the MRCA. This type of evidence can be used in support of both positive and "not" GO annotations.

Super-classes obo:ECO_0000080c
Sub-classes obo:ECO_0007328c
obo:ECO_0000318c

cap analysis of gene expression evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000309
Description

Complementary DNA (cDNA) is synthesized from microgram quantities of mRNA using first-strand cDNA primer (oligo dT12-18) and reverse transcriptase in the presence of trehalose and sorbitol, followed by selection of full-length cDNA with biotinylated cap-trapper. Linkers are attached to the 5' ends of full-length enriched cDNAs to introduce a recognition site for the restriction endonuclease MmeI, which creates a two base overhang. After amplification, sequencing tags are concatenated for high-throughput sequencing. Resulting sort reads are aligned against a reference genome, and downstream analysis is performed.

Super-classes obo:ECO_0000009c
Restrictions obo:OBI_0000312op some obo:OBI_0001674c
Sub-classes obo:ECO_0007248c
obo:ECO_0007144c

nano-cap analysis of gene expression evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000310
Description

NanoCAGE captures the 5' ends of molecules by template switching. When polymerizing the cDNA of a capped mRNA, the reverse transcriptase adds extra cytosines that are complementary to the cap. Each 5' full length cDNAs is extended upon hybridization of the riboguanosine-tailed template switching oligonucleotides to these extra cytosines. In semisuppressive PCR, the short templates fold intramolecularly and prevent the binding of primers, which precludes amplification; longer molecules are less likely to fold and are thus amplified. Templates derived from reaction artifacts form stable homoduplexes, also precluding amplification. After template switching, semisuppressive PCR, and EcoP151 cleavage, 25-bp tags are ligated to bar code-containing oligonucleotide adaptors. After PCR amplification, the nanoCAGE tags are sequenced by synthesis. NanoCAGE requires as little as 10 nanograms of total RNA.

Super-classes obo:ECO_0000009c
Restrictions obo:OBI_0000312op some obo:OBI_0001673c
Sub-classes obo:ECO_0007145c
obo:ECO_0007249c

imported informationc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000311
Super-classes obo:ECO_0006151c
Sub-classes obo:ECO_0000313c
obo:ECO_0000312c

imported information used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000312
Super-classes obo:ECO_0006155c
obo:ECO_0000311c

imported information used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000313
Super-classes obo:ECO_0006156c
obo:ECO_0000311c
Sub-classes obo:ECO_0000322c
obo:ECO_0000323c

direct assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000314
Super-classes obo:ECO_0000269c
obo:ECO_0000002c
Sub-classes obo:ECO_0001197c
obo:ECO_0007720c
obo:ECO_0007111c
obo:ECO_0006325c
obo:ECO_0007147c
obo:ECO_0005580c
obo:ECO_0001204c
obo:ECO_0001210c
obo:ECO_0001199c
obo:ECO_0001239c
obo:ECO_0007713c
obo:ECO_0007036c
obo:ECO_0007709c
obo:ECO_0005614c
obo:ECO_0007149c
obo:ECO_0001157c
obo:ECO_0007716c
obo:ECO_0001213c
obo:ECO_0007157c
obo:ECO_0007688c
obo:ECO_0007146c
obo:ECO_0001140c
obo:ECO_0007632c
obo:ECO_0007703c
obo:ECO_0001209c
obo:ECO_0001217c
obo:ECO_0006006c
obo:ECO_0001182c
obo:ECO_0001144c
obo:ECO_0007186c
obo:ECO_0001159c
obo:ECO_0001206c
obo:ECO_0007084c
obo:ECO_0007717c
obo:ECO_0001190c
obo:ECO_0007692c
obo:ECO_0001192c
obo:ECO_0007185c
obo:ECO_0007040c
obo:ECO_0001256c
obo:ECO_0006234c
obo:ECO_0001153c
obo:ECO_0007725c
obo:ECO_0007704c
obo:ECO_0001200c
obo:ECO_0007702c
obo:ECO_0006305c
obo:ECO_0001154c
obo:ECO_0005501c
obo:ECO_0001576c
obo:ECO_0007698c
obo:ECO_0006230c
obo:ECO_0001249c
obo:ECO_0007685c
obo:ECO_0001271c
obo:ECO_0007119c
obo:ECO_0001207c
obo:ECO_0007715c
obo:ECO_0001214c
obo:ECO_0001173c
obo:ECO_0001148c
obo:ECO_0007708c
obo:ECO_0007192c
obo:ECO_0007187c
obo:ECO_0007696c
obo:ECO_0007721c
obo:ECO_0001156c
obo:ECO_0007722c
obo:ECO_0007718c
obo:ECO_0001205c
obo:ECO_0000279c
obo:ECO_0006307c
obo:ECO_0001166c
obo:ECO_0007005c
obo:ECO_0001143c
obo:ECO_0001191c
obo:ECO_0007108c
obo:ECO_0007693c
obo:ECO_0001198c
obo:ECO_0001219c
obo:ECO_0001216c
obo:ECO_0007038c
obo:ECO_0007109c
obo:ECO_0001208c
obo:ECO_0007723c
obo:ECO_0007719c
obo:ECO_0007707c
obo:ECO_0007724c
obo:ECO_0001254c
obo:ECO_0007689c
obo:ECO_0007016c
obo:ECO_0007107c
obo:ECO_0007701c
obo:ECO_0001138c
obo:ECO_0006319c
obo:ECO_0001193c
obo:ECO_0006005c
obo:ECO_0001203c
obo:ECO_0001195c
obo:ECO_0007695c
obo:ECO_0001222c
obo:ECO_0001139c
obo:ECO_0007691c
obo:ECO_0007159c
obo:ECO_0001248c
obo:ECO_0007070c
obo:ECO_0005638c
obo:ECO_0007699c
obo:ECO_0007188c
obo:ECO_0007712c
obo:ECO_0001196c
obo:ECO_0006021c
obo:ECO_0001162c
obo:ECO_0001263c
obo:ECO_0007148c
obo:ECO_0007697c
obo:ECO_0001220c
obo:ECO_0007114c
obo:ECO_0007710c
obo:ECO_0001212c
obo:ECO_0005801c
obo:ECO_0007122c
obo:ECO_0007690c
obo:ECO_0001165c
obo:ECO_0000353c
obo:ECO_0001174c
obo:ECO_0001194c
obo:ECO_0007694c
obo:ECO_0001145c
obo:ECO_0001241c
obo:ECO_0001261c
obo:ECO_0006064c
obo:ECO_0001246c
obo:ECO_0001158c
obo:ECO_0001211c
obo:ECO_0001233c
obo:ECO_0007714c
obo:ECO_0007711c
obo:ECO_0001234c
obo:ECO_0001201c
obo:ECO_0001141c
obo:ECO_0007726c
obo:ECO_0001176c
obo:ECO_0001235c
obo:ECO_0001142c
obo:ECO_0001264c
obo:ECO_0007106c
obo:ECO_0001215c
obo:ECO_0007727c
obo:ECO_0001243c
obo:ECO_0001221c
obo:ECO_0006291c

mutant phenotype evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000315
Super-classes obo:ECO_0007634c
obo:ECO_0000015c
Sub-classes obo:ECO_0007165c
obo:ECO_0006095c
obo:ECO_0006050c
obo:ECO_0005530c
obo:ECO_0007117c
obo:ECO_0006101c
obo:ECO_0006051c
obo:ECO_0007089c
obo:ECO_0001247c
obo:ECO_0007166c
obo:ECO_0007168c
obo:ECO_0001161c
obo:ECO_0001175c
obo:ECO_0001179c
obo:ECO_0007163c
obo:ECO_0007001c
obo:ECO_0006049c
obo:ECO_0007118c
obo:ECO_0006099c
obo:ECO_0007167c
obo:ECO_0006052c
obo:ECO_0007092c
obo:ECO_0005667c

genetic interaction evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000316
Super-classes obo:ECO_0007634c
obo:ECO_0000011c
Sub-classes obo:ECO_0006096c
obo:ECO_0006094c
obo:ECO_0007003c
obo:ECO_0006091c

genomic context evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000317
Super-classes obo:ECO_0000177c
obo:ECO_0000252c
Sub-classes obo:ECO_0000354c

biological aspect of ancestor evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000318
Super-classes obo:ECO_0000252c
obo:ECO_0000308c

biological aspect of descendant evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000319
Super-classes obo:ECO_0000214c
obo:ECO_0000252c

phylogenetic determination of loss of key residues evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000320
Super-classes obo:ECO_0000216c
obo:ECO_0000252c

rapid divergence from ancestral sequence evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000321
Super-classes obo:ECO_0000215c
obo:ECO_0000252c

imported manually asserted information used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000322
Super-classes obo:ECO_0000313c

imported automatically asserted information used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000323
Super-classes obo:ECO_0000313c

imaging assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000324
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some obo:OBI_0000185c
Sub-classes obo:ECO_0007363c
obo:ECO_0001026c
obo:ECO_0001097c
obo:ECO_0001256c
obo:ECO_0001051c
obo:ECO_0001098c

chromatography evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000325
Super-classes obo:ECO_0000006c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb741c)
obo:OBI_0000312op some obo:OBI_0001630c
Sub-classes obo:ECO_0000140c
obo:ECO_0007681c
obo:ECO_0001010c
obo:ECO_0001049c
obo:ECO_0001809c
obo:ECO_0001052c
obo:ECO_0007680c

transcript splice pattern evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000326
Super-classes obo:ECO_0000200c
Sub-classes obo:ECO_0000327c
obo:ECO_0007749c
obo:ECO_0007825c
obo:ECO_0000328c

whole transcript splice pattern evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000327
Description

This term is used by the NCBI Reference Sequences (RefSeq) in support of sequences that have the same splice pattern as a RefSeq transcript. If such full transcript information is not available, RefSeq reports sequences that match the splice pattern of a coding sequence (CDS) annotated on a RefSeq, supported by the evidence term ECO:0000328 or a child.

Super-classes obo:ECO_0000326c
Sub-classes obo:ECO_0000332c
obo:ECO_0000329c

coding sequence splice pattern evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000328
Description

This term is used by the NCBI Reference Sequences (RefSeq) in support of sequences that match the splice pattern of a coding sequence (CDS) annotated on a RefSeq, but for which full transcript information is unavailable. For sequences that have the same splice pattern as a whole RefSeq transcript, use the evidence term ECO:0000327 or a child.

Super-classes obo:ECO_0000326c
Sub-classes obo:ECO_0000330c
obo:ECO_0000331c

whole transcript splice pattern evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000329
Description

This term is used by the NCBI Reference Sequences (RefSeq) in support of sequences that have the same splice pattern as a RefSeq transcript. If such full transcript information is not available, RefSeq reports sequences that match the splice pattern of a coding sequence (CDS) annotated on a RefSeq, supported by the evidence term ECO:0000328 or a child.

Super-classes obo:ECO_0000247c
obo:ECO_0000327c

coding sequence splice pattern evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000330
Description

This term is used by the NCBI Reference Sequences (RefSeq) in support of sequences that match the splice pattern of a coding sequence (CDS) annotated on a RefSeq, but for which full transcript information is unavailable. For sequences that have the same splice pattern as a whole RefSeq transcript, use the evidence term ECO:0000327 or a child.

Super-classes obo:ECO_0000328c
obo:ECO_0000247c

coding sequence splice pattern evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000331
Description

This term is used by the NCBI Reference Sequences (RefSeq) in support of sequences that match the splice pattern of a coding sequence (CDS) annotated on a RefSeq, but for which full transcript information is unavailable. For sequences that have the same splice pattern as a whole RefSeq transcript, use the evidence term ECO:0000327 or a child.

Super-classes obo:ECO_0007825c
obo:ECO_0000328c

whole transcript splice pattern evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000332
Description

This term is used by the NCBI Reference Sequences (RefSeq) in support of sequences that have the same splice pattern as a RefSeq transcript. If such full transcript information is not available, RefSeq reports sequences that match the splice pattern of a coding sequence (CDS) annotated on a RefSeq, supported by the evidence term ECO:0000328 or a child.

Super-classes obo:ECO_0007825c
obo:ECO_0000327c

sodium dodecyl sulfate polyacrylamide gel electrophoresis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000333
Description

Electrophoretic mobility is a function of both the length and charge of a protein. The protein sample is linearized with sodium dodecyl sulfate (SDS), an anionic detergent. Typically, polypeptides bound with SDS possess an even distribution of charge per unit mass, and subsequent fractionation is by size.

Super-classes obo:ECO_0000337c
Sub-classes obo:ECO_0007770c
obo:ECO_0007689c
obo:ECO_0000112c

particle size and count assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000334
Description

An example of an instrument used to analyze particle sizes and counts is the Beckman Coulter® Z Series system.

Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007146c
obo:ECO_0007250c

substance quantification evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000335
Description

Two examples of substance quantification assay are (i) measuring how much of a radiolabelled compound is taken up by a cell and (ii) measuring how much of a substrate is turned over by a given enzyme.

Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007685c
obo:ECO_0007805c
obo:ECO_0007015c

competitive growth assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000336
Super-classes obo:ECO_0005007c
Restrictions obo:OBI_0000312op some obo:OBI_0000978c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb763c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb768c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb763c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb768c)
Sub-classes obo:ECO_0007251c
obo:ECO_0007147c

gel electrophoresis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000337
Description

Molecules typically separated include DNA, RNA, or protein. The gel is typically made of agarose, polyacrylamide, or starch.

Super-classes obo:ECO_0000002c
Restrictions obo:IAO_0000136op some obo:OBI_0600051c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb780c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb775c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb780c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb775c)
Sub-classes obo:ECO_0001025c
obo:ECO_0000338c
obo:ECO_0001029c
obo:ECO_0005503c
obo:ECO_0007688c
obo:ECO_0007769c
obo:ECO_0000333c
obo:ECO_0000339c
obo:ECO_0006262c

pulsed-field gel electrophoresis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000338
Super-classes obo:ECO_0000337c
Sub-classes obo:ECO_0007148c
obo:ECO_0007252c

two-dimensional agarose gel electrophoresis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000339
Description

The first dimension gel is intentionally run at low voltage in low percentage agarose to separate DNA molecules in proportion to their mass. The second dimension is run at high voltage in a gel of higher agarose concentration in the presence of ethidium bromide so that the mobility of a non-linear molecule is drastically influenced by its shape.

Super-classes obo:ECO_0000337c
Sub-classes obo:ECO_0007149c
obo:ECO_0007253c

plasmid maintenance assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000340
Description

Loss per generation is determined by comparing colony numbers on selective and non-selective media.

Super-classes obo:ECO_0000006c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb787c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb792c)
obo:IAO_0000136op some obo:GO_0006276c
obo:OBI_0000312op some obo:OBI_0000964c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb787c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb792c)
Sub-classes obo:ECO_0007254c
obo:ECO_0007150c

specific protein inhibition by antibody evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000341
Super-classes obo:ECO_0000020c
Sub-classes obo:ECO_0007151c
obo:ECO_0007255c

support of intron positions by RNA-sequencing alignment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000342
Description

RNA-seq alignment intron location evidence is used by NCBI RefSeq (http://www.ncbi.nlm.nih.gov/refseq). Exon-exon boundaries (or intron locations) of a RefSeq transcript, as determined by aligning the transcript to a reference chromosome, are compared to intron locations supported by RNAseq data.

Super-classes obo:ECO_0000295c
Sub-classes obo:ECO_0000347c
obo:ECO_0006172c
obo:ECO_0000346c
obo:ECO_0000344c
obo:ECO_0000343c

full support of intron positions by RNA-sequencing alignment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000343
Description

Full support entails that all exon pairs represented in the transcript are supported. For example, for a transcript containing five exons, if liver RNA-seq reads support all four introns but brain RNA-seq supports only three introns, then the liver data fully support the transcript exons whereas the brain data do not.

Super-classes obo:ECO_0000342c
Sub-classes obo:ECO_0000349c
obo:ECO_0000348c

partial support of intron positions by RNA-sequencing alignment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000344
Description

Partial support can occur in two ways. First, one or more exon-exon pair (intron) is not supported by any RNA-seq sample included in the analysis. Second, no single RNA-seq sample provides support for all exon-exon pairs (introns) represented in a transcript, but all represented exons are supported by at least one sample.

Super-classes obo:ECO_0000342c
Sub-classes obo:ECO_0000350c
obo:ECO_0000351c

single exon transcript confirmation via alignment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000345
Super-classes obo:ECO_0000200c
Sub-classes obo:ECO_0007256c
obo:ECO_0007152c

support of intron positions by RNA-sequencing alignment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000346
Super-classes obo:ECO_0000342c
obo:ECO_0006068c
Sub-classes obo:ECO_0000351c
obo:ECO_0000349c
obo:ECO_0006174c

support of intron positions by RNA-sequencing alignment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000347
Super-classes obo:ECO_0000342c
obo:ECO_0006069c
Sub-classes obo:ECO_0000348c
obo:ECO_0006173c
obo:ECO_0000350c

full support of intron positions by RNA-sequencing alignment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000348
Super-classes obo:ECO_0000347c
obo:ECO_0000343c

full support of intron positions by RNA-sequencing alignment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000349
Super-classes obo:ECO_0000343c
obo:ECO_0000346c

partial support of intron positions by RNA-sequencing alignment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000350
Super-classes obo:ECO_0000347c
obo:ECO_0000344c

partial support of intron positions by RNA-sequencing alignment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000351
Super-classes obo:ECO_0000346c
obo:ECO_0000344c

evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000352
Super-classes obo:ECO_0000000c
Restrictions obo:ECO_9000000op some obo:ECO_0000218c
Sub-classes obo:ECO_0007751c
obo:ECO_0005610c
obo:ECO_0007668c
obo:ECO_0006056c
obo:ECO_0007746c
obo:ECO_0006155c
obo:ECO_0000244c
obo:ECO_0005542c
obo:ECO_0005547c
obo:ECO_0000252c
obo:ECO_0005543c
obo:ECO_0000269c
obo:ECO_0007747c

physical interaction evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000353
Super-classes obo:ECO_0000021c
obo:ECO_0000314c
Sub-classes obo:ECO_0001181c
obo:ECO_0006303c
obo:ECO_0006088c
obo:ECO_0006329c
obo:ECO_0001227c
obo:ECO_0001164c
obo:ECO_0001269c
obo:ECO_0001807c
obo:ECO_0006277c
obo:ECO_0006293c
obo:ECO_0001226c
obo:ECO_0006327c
obo:ECO_0006081c
obo:ECO_0006074c
obo:ECO_0006075c

gene neighbors evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000354
Super-classes obo:ECO_0000317c
obo:ECO_0000084c

phylogenetic distribution evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000355
Description

Example of use: "The presence of paired evaginated hemispheres and olfactory bulbs in both agnathan and gnathostome radiations suggests that such hemispheres were also present in the common ancestor." PMID: 7013637. Northcutt RG. (1981) Evolution of the telencephalon in nonmammals. Ann. Rev. Neurosci.

Super-classes obo:ECO_0000080c
Sub-classes obo:ECO_0007153c
obo:ECO_0007257c

differential geneset expression evidence from microarray experiment (GSEA, Fisher-exact)c # Classes

URI http://purl.obolibrary.org/obo/ECO_0000358
Super-classes obo:ECO_0000009c
Sub-classes obo:ECO_0007258c
obo:ECO_0007154c

differential geneset expression evidence from RNA-seq experiment (GSEA, Fisher-exact)c # Classes

URI http://purl.obolibrary.org/obo/ECO_0000359
Super-classes obo:ECO_0000009c
Sub-classes obo:ECO_0007155c
obo:ECO_0007259c

biological target-disease association via drug evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000360
Super-classes obo:ECO_0000006c
Sub-classes obo:ECO_0007156c
obo:ECO_0007260c

inferential evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000361
Description

Inference is the process of deriving logical conclusions from premises known or assumed to be true, or alternatively, arriving at conclusions via some non-logical means of observation of patterns of facts, which can result in identifying new meanings and contexts for understanding. Given the evidence provided by a set of premises, deductive reasoning involves drawing conclusions that necessarily follow, i.e. are certain, whereas inductive reasoning generates conclusions that are likely to be, but are not necessarily, true.

Super-classes obo:ECO_0000000c
Sub-classes obo:ECO_0006185c
obo:ECO_0000362c
obo:ECO_0000205c
obo:ECO_0007850c
obo:ECO_0007751c
obo:ECO_0007832c

computational inferencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0000362
Super-classes obo:ECO_0000361c
obo:ECO_0007672c
Sub-classes obo:ECO_0000363c
obo:ECO_0007631c

computational inference used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000363
Super-classes obo:ECO_0007669c
obo:ECO_0000362c
obo:ECO_0007832c
Sub-classes obo:ECO_0000364c
obo:ECO_0000366c

evidence based on logical inference from manual annotation used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000364
Super-classes obo:ECO_0000363c

evidence based on logical inference from automatic annotation used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000366
Super-classes obo:ECO_0000363c

evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0000501
Super-classes obo:ECO_0000000c
Restrictions obo:ECO_9000000op some obo:ECO_0000203c
Sub-classes obo:ECO_0000251c
obo:ECO_0007669c
obo:ECO_0007832c
obo:ECO_0006156c
obo:ECO_0007297c
obo:ECO_0007827c
obo:ECO_0000213c
obo:ECO_0006057c

3D cell culture evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001001
Super-classes obo:ECO_0005007c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb844c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb849c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb844c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb849c)
Sub-classes obo:ECO_0007335c
obo:ECO_0001138c

[3H]arachidonic acid release assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001002
Super-classes obo:ECO_0001565c
Restrictions obo:OBI_0000312op some obo:OBI_0000366c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb857c)
obo:IAO_0000136op some obo:GO_0050482c
Sub-classes obo:ECO_0001142c
obo:ECO_0007339c

[3H]-thymidine incorporation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001003
Super-classes obo:ECO_0005008c
Restrictions obo:OBI_0000312op some obo:OBI_0000669c
Sub-classes obo:ECO_0001141c
obo:ECO_0007338c

51Cr release assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001004
Super-classes obo:ECO_0005012c
Restrictions obo:IAO_0000136op some obo:GO_0001906c
obo:OBI_0000312op some obo:OBI_9999994c
Sub-classes obo:ECO_0001139c
obo:ECO_0007336c

7-aminoactinomycin staining evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001005
Super-classes obo:ECO_0005019c
Sub-classes obo:ECO_0001140c
obo:ECO_0007337c

adhesion assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001006
Super-classes obo:ECO_0001565c
Restrictions obo:OBI_0000312op some obo:OBI_0000964c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb868c)
obo:IAO_0000136op some obo:GO_0060352c
Sub-classes obo:ECO_0007340c
obo:ECO_0001143c

adoptive cell transfer evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001007
Super-classes obo:ECO_0005502c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb880c and obo:GO_0008150c and n6d93943533d34a84b8c3678390dd5edfb874c)
obo:IAO_0000136op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb880c and obo:GO_0008150c and n6d93943533d34a84b8c3678390dd5edfb874c)
obo:OBI_0000312op some obo:OBI_0000978c
Sub-classes obo:ECO_0001144c
obo:ECO_0007341c

alamarBlue assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001008
Super-classes obo:ECO_0005004c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb886c)
obo:OBI_0000312op some obo:OBI_0000443c
Sub-classes obo:ECO_0007342c
obo:ECO_0001145c

allograft transplantation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001009
Super-classes obo:ECO_0000240c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb891c)
Sub-classes obo:ECO_0007343c
obo:ECO_0001146c

anion-exchange chromatography evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001010
Super-classes obo:ECO_0000325c
Sub-classes obo:ECO_0007344c
obo:ECO_0001147c

annexin-V staining evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001011
Super-classes obo:ECO_0005034c
Sub-classes obo:ECO_0001148c
obo:ECO_0007345c

cognitive assay phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001012
Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0007346c
obo:ECO_0001149c

blocking monoclonal antibody evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001013
Super-classes obo:ECO_0000040c
Restrictions obo:OBI_0000312op some obo:OBI_0001593c
obo:IAO_0000136op some obo:OBI_0001702c
Sub-classes obo:ECO_0007347c
obo:ECO_0001150c

blocking peptide evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001014
Super-classes obo:ECO_0000040c
Restrictions obo:IAO_0000136op some obo:GO_0042605c
obo:OBI_0000312op some obo:OBI_0001593c
Sub-classes obo:ECO_0001151c
obo:ECO_0007349c

blocking polyclonal antibody evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001015
Super-classes obo:ECO_0000040c
Sub-classes obo:ECO_0007350c
obo:ECO_0001152c

blood test evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001016
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some (obo:OBI_0000443c and obo:OBI_0000630c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb900c)
obo:OBI_0000312op some (obo:OBI_0000443c and obo:OBI_0000630c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb900c)
Sub-classes obo:ECO_0007351c
obo:ECO_0001153c

Boyden chamber assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001017
Super-classes obo:ECO_0005021c
Restrictions obo:IAO_0000136op some obo:GO_0060326c
Sub-classes obo:ECO_0007352c
obo:ECO_0001154c

bromodeoxyuridine incorporation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001018
Super-classes obo:ECO_0001107c
Restrictions obo:OBI_0000312op some obo:OBI_0000664c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb915c)
Sub-classes obo:ECO_0001155c
obo:ECO_0007353c

caspase assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001019
Super-classes obo:ECO_0005034c
Sub-classes obo:ECO_0001156c
obo:ECO_0007355c

cell counting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001020
Super-classes obo:ECO_0001565c
Restrictions obo:IAO_0000136op some obo:GO_0008283c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb926c)
obo:OBI_0000312op some obo:OBI_0000978c
Sub-classes obo:ECO_0007356c
obo:ECO_0001157c

cell permeability assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001021
Super-classes obo:ECO_0001565c
Restrictions obo:IAO_0000136op some obo:GO_0009987c
obo:OBI_0000312op some obo:OBI_0001977c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb934c)
Sub-classes obo:ECO_0001158c
obo:ECO_0007357c

carboxyfluorescein diacetate succinimidyl ester staining evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001022
Super-classes obo:ECO_0005019c
Sub-classes obo:ECO_0001159c
obo:ECO_0007358c

chemiluminescence-linked immunoassay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001023
Super-classes obo:ECO_0005517c
Sub-classes obo:ECO_0007359c
obo:ECO_0001160c

chimeric protein phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001024
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0001161c
obo:ECO_0007360c

co-electrophoresis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001025
Super-classes obo:ECO_0000337c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb941c and obo:OBI_0001146c and n6d93943533d34a84b8c3678390dd5edfb949c)
obo:IAO_0000136op some obo:GO_0005488c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb941c and obo:OBI_0001146c and n6d93943533d34a84b8c3678390dd5edfb949c)
Sub-classes obo:ECO_0001162c
obo:ECO_0007361c

co-localization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001026
Super-classes obo:ECO_0000324c
Restrictions obo:IAO_0000136op some obo:GO_0033036c
Sub-classes obo:ECO_0007362c
obo:ECO_0001163c

colony counting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001027
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some (obo:OBI_0000978c and n6d93943533d34a84b8c3678390dd5edfb961c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb955c)
obo:OBI_0000312op some (obo:OBI_0000978c and n6d93943533d34a84b8c3678390dd5edfb961c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb955c)
Sub-classes obo:ECO_0007365c
obo:ECO_0001165c

co-sedimentation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001028
Super-classes obo:ECO_0000021c
Restrictions obo:OBI_0000312op some obo:OBI_0000288c
Sub-classes obo:ECO_0001164c
obo:ECO_0007364c

comet assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001029
Super-classes obo:ECO_0000337c
Restrictions obo:IAO_0000136op some obo:GO_0006974c
obo:OBI_0000312op some obo:OBI_0302736c
Sub-classes obo:ECO_0007366c
obo:ECO_0001166c

conditional knockout evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001030
Super-classes obo:ECO_0001091c
Sub-classes obo:ECO_0001168c
obo:ECO_0007369c

conditional knockin evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001031
Super-classes obo:ECO_0001090c
Sub-classes obo:ECO_0001167c
obo:ECO_0007367c

constitutively active mutant evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001032
Super-classes obo:ECO_0000059c
Restrictions obo:IAO_0000136op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb973c and obo:GO_0009058c and obo:GO_0010467c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb973c and obo:GO_0009058c and obo:GO_0010467c)
Sub-classes obo:ECO_0007371c
obo:ECO_0001169c

cross-linking evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001033
Super-classes obo:ECO_0000024c
Restrictions obo:IAO_0000136op some obo:GO_0005515c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb981c)
obo:OBI_0000312op some obo:OBI_0001591c
Sub-classes obo:ECO_0007372c
obo:ECO_0001170c

crystallography evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001034
Super-classes obo:ECO_0005031c
Sub-classes obo:ECO_0001823c
obo:ECO_0001171c
obo:ECO_0007374c

cytochemistry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001035
Super-classes obo:ECO_0001050c
Sub-classes obo:ECO_0007375c
obo:ECO_0001130c
obo:ECO_0001172c

cytochrome C release assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001036
Super-classes obo:ECO_0005034c
Restrictions obo:OBI_0000312op some (obo:OBI_0000443c and obo:OBI_0001977c)
Sub-classes obo:ECO_0001173c
obo:ECO_0007377c

4',6-diamidino-2-phenylindole staining evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001037
Super-classes obo:ECO_0005019c
Sub-classes obo:ECO_0001174c
obo:ECO_0007378c

deletion mutation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001038
Description

As a child of 'experimental phenotypic evidence', this is not to be confused with the biological processes deletion mutation / deletion deficiency in which DNA is lost during DNA replication.

Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007379c
obo:ECO_0001175c

DNA laddering assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001039
Super-classes obo:ECO_0005034c
Restrictions obo:IAO_0000136op some obo:GO_0006309c
Sub-classes obo:ECO_0001176c
obo:ECO_0007380c

RNA dot blot assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001040
Super-classes obo:ECO_0005518c
Restrictions obo:OBI_0000312op some (obo:OBI_0002171c and n6d93943533d34a84b8c3678390dd5edfb996c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb991c)
obo:OBI_0000312op some (obo:OBI_0002171c and n6d93943533d34a84b8c3678390dd5edfb996c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb991c)
Sub-classes obo:ECO_0007381c
obo:ECO_0001177c

dominant-negative mutant phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001042
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007382c
obo:ECO_0001179c

Edman degradation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001043
Super-classes obo:ECO_0000269c
obo:ECO_0001044c

Edman degradation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001044
Super-classes obo:ECO_0005517c
Sub-classes obo:ECO_0001043c
obo:ECO_0007334c

eTag assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001045
Super-classes obo:ECO_0000023c
Restrictions obo:IAO_0000136op some obo:GO_0010467c
obo:OBI_0000312op some (obo:OBI_0000443c and n6d93943533d34a84b8c3678390dd5edfb1006c)
Sub-classes obo:ECO_0001180c
obo:ECO_0007383c

filter binding assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001046
Super-classes obo:ECO_0000021c
Restrictions obo:OBI_0000312op some (obo:OBI_0001591c and n6d93943533d34a84b8c3678390dd5edfb1019c)
Sub-classes obo:ECO_0007385c
obo:ECO_0001181c

fluorescence in situ hybridization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001047
Super-classes obo:ECO_0001534c
obo:ECO_0001836c
Restrictions obo:IAO_0000136op some obo:GO_0051276c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1026c)
obo:OBI_0000312op some obo:OBI_0001683c
Sub-classes obo:ECO_0001182c
obo:ECO_0007386c

fluorescence resonance energy transfer evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001048
Super-classes obo:ECO_0006273c
Sub-classes obo:ECO_0007387c
obo:ECO_0001183c

gel-filtration evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001049
Super-classes obo:ECO_0000325c
Restrictions obo:OBI_0000312op some (obo:OBI_0001630c and n6d93943533d34a84b8c3678390dd5edfb1036c)
Sub-classes obo:ECO_0001184c
obo:ECO_0007388c

histochemistry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001050
Super-classes obo:ECO_0001051c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1041c)
Sub-classes obo:ECO_0001035c
obo:ECO_0001185c
obo:ECO_0007376c

histology evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001051
Super-classes obo:ECO_0000324c
Restrictions obo:IAO_0000136op some obo:GO_0048532c
obo:OBI_0000312op some obo:OBI_0600020c
Sub-classes obo:ECO_0007389c
obo:ECO_0001187c
obo:ECO_0001050c

high-performance liquid chromatography evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001052
Super-classes obo:ECO_0000325c
Restrictions obo:OBI_0000312op some obo:OBI_0002116c
Sub-classes obo:ECO_0001272c
obo:ECO_0007472c

immunocytochemistry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001053
Super-classes obo:ECO_0005517c
Sub-classes obo:ECO_0007390c
obo:ECO_0001186c

immunodepletion evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001054
Super-classes obo:ECO_0000040c
Sub-classes obo:ECO_0001188c
obo:ECO_0007391c

immunohistochemistry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001055
Super-classes obo:ECO_0005517c
Sub-classes obo:ECO_0001189c
obo:ECO_0007392c

induced mutation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001056
Description

This term was made obsolete for a couple of reasons: the def. doesn’t make sense as the suggested means of mutagenesis fail to introduce exogenous DNA (it is a child of genetic transformation evidence) and the def. is too much like random mutagenesis evidence.

in vitro acetylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001057
Super-classes obo:ECO_0001546c
Sub-classes obo:ECO_0001190c
obo:ECO_0007393c

in vitro cleavage assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001058
Super-classes obo:ECO_0001547c
Sub-classes obo:ECO_0007394c
obo:ECO_0001191c

in vitro deubiquitination assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001059
Super-classes obo:ECO_0001552c
Sub-classes obo:ECO_0001196c
obo:ECO_0007399c

in vitro deacetylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001060
Super-classes obo:ECO_0001548c
Sub-classes obo:ECO_0001192c
obo:ECO_0007395c

in vitro defarnesylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001061
Super-classes obo:ECO_0001549c
Sub-classes obo:ECO_0001193c
obo:ECO_0007396c

in vitro demethylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001062
Super-classes obo:ECO_0001550c
Sub-classes obo:ECO_0007397c
obo:ECO_0001194c

in vitro desumoylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001063
Super-classes obo:ECO_0001551c
Sub-classes obo:ECO_0007398c
obo:ECO_0001195c

in vitro farnesylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001064
Super-classes obo:ECO_0001553c
Sub-classes obo:ECO_0007400c
obo:ECO_0001197c

in vitro methylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001065
Super-classes obo:ECO_0001554c
Sub-classes obo:ECO_0000086c
obo:ECO_0001198c
obo:ECO_0007401c
obo:ECO_0000077c
obo:ECO_0000069c

in vitro palmitoylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001066
Super-classes obo:ECO_0001555c
Sub-classes obo:ECO_0007402c
obo:ECO_0001199c

in vitro phosphatase assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001067
Super-classes obo:ECO_0001556c
Sub-classes obo:ECO_0007403c
obo:ECO_0001200c

in vitro protein kinase assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001068
Super-classes obo:ECO_0001558c
Sub-classes obo:ECO_0001202c
obo:ECO_0007405c

in vitro polyADP-ribosylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001069
Super-classes obo:ECO_0001557c
Sub-classes obo:ECO_0001201c
obo:ECO_0007404c

in vitro sumoylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001070
Super-classes obo:ECO_0001559c
Sub-classes obo:ECO_0007406c
obo:ECO_0001203c

in vitro transcription assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001071
Super-classes obo:ECO_0000168c
Sub-classes obo:ECO_0007407c
obo:ECO_0001204c

in vitro translation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001072
Super-classes obo:ECO_0001561c
Sub-classes obo:ECO_0001205c
obo:ECO_0007408c

in vitro ubiquitination assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001073
Super-classes obo:ECO_0001562c
Sub-classes obo:ECO_0001206c
obo:ECO_0007409c

in vivo acetylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001074
Super-classes obo:ECO_0001546c
Sub-classes obo:ECO_0007410c
obo:ECO_0001207c

in vivo cleavage assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001075
Super-classes obo:ECO_0001547c
Sub-classes obo:ECO_0001208c
obo:ECO_0007411c

in vivo deacetylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001076
Super-classes obo:ECO_0001548c
Sub-classes obo:ECO_0007412c
obo:ECO_0001209c

in vivo defarnesylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001077
Super-classes obo:ECO_0001549c
Sub-classes obo:ECO_0001210c
obo:ECO_0007413c

in vivo demethylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001078
Super-classes obo:ECO_0001550c
Sub-classes obo:ECO_0007414c
obo:ECO_0001211c

in vivo deubiquitination assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001079
Super-classes obo:ECO_0001552c
Sub-classes obo:ECO_0001213c
obo:ECO_0007416c

in vivo desumoylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001080
Super-classes obo:ECO_0001551c
Sub-classes obo:ECO_0007415c
obo:ECO_0001212c

in vivo farnesylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001081
Super-classes obo:ECO_0001553c
Sub-classes obo:ECO_0007417c
obo:ECO_0001214c

in vivo methylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001082
Super-classes obo:ECO_0001554c
Sub-classes obo:ECO_0001215c
obo:ECO_0007418c

in vivo palmitoylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001083
Super-classes obo:ECO_0001555c
Sub-classes obo:ECO_0001216c
obo:ECO_0007419c

in vivo phosphatase assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001084
Super-classes obo:ECO_0001556c
Sub-classes obo:ECO_0001217c
obo:ECO_0007420c

in vivo protein kinase assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001085
Super-classes obo:ECO_0001558c
Sub-classes obo:ECO_0001218c
obo:ECO_0007421c

in vivo sumoylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001086
Super-classes obo:ECO_0001559c
Sub-classes obo:ECO_0007422c
obo:ECO_0001219c

in vivo transcription assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001087
Super-classes obo:ECO_0000168c
Sub-classes obo:ECO_0007423c
obo:ECO_0001220c

in vivo translation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001088
Super-classes obo:ECO_0001561c
Restrictions obo:IAO_0000136op some obo:GO_0006412c
obo:OBI_0000312op some obo:OBI_0000966c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1052c)
Sub-classes obo:ECO_0007424c
obo:ECO_0001221c

in vivo ubiquitination assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001089
Super-classes obo:ECO_0001562c
Sub-classes obo:ECO_0001222c
obo:ECO_0007425c

knockin evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001090
Super-classes obo:ECO_0005027c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1058c)
Sub-classes obo:ECO_0001031c
obo:ECO_0001224c
obo:ECO_0007368c

knockout phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001091
Description

Contrast with deletion mutation phenotypic evidence in which DNA is deleted which may result in altering the function of the resulting protein(s).

Super-classes obo:ECO_0005027c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1063c)
Sub-classes obo:ECO_0001225c
obo:ECO_0007370c
obo:ECO_0001030c
obo:ECO_0001822c

lipid binding assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001092
Super-classes obo:ECO_0000021c
Restrictions obo:IAO_0000136op some (obo:GO_0008289c and n6d93943533d34a84b8c3678390dd5edfb1068c)
obo:OBI_0000312op some obo:OBI_0001591c
Sub-classes obo:ECO_0001226c
obo:ECO_0007428c

luminescence-based mammalian interactome mapping assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001093
Super-classes obo:ECO_0000021c
Restrictions obo:OBI_0000312op some obo:OBI_0000288c
obo:IAO_0000136op some obo:GO_0005515c
Sub-classes obo:ECO_0007429c
obo:ECO_0001227c

macroscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001094
Super-classes obo:ECO_0000006c
Sub-classes obo:ECO_0007430c
obo:ECO_0001228c

mammalian 2-hybrid assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001095
Super-classes obo:ECO_0000025c
Sub-classes obo:ECO_0001229c
obo:ECO_0007431c

mass spectrometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001096
Super-classes obo:ECO_0005504c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1077c)
obo:OBI_0000312op some obo:OBI_0000470c
Sub-classes obo:ECO_0001230c
obo:ECO_0001119c
obo:ECO_0007433c
obo:ECO_0001132c
obo:ECO_0001580c
obo:ECO_0001586c
obo:ECO_0005603c
obo:ECO_0006251c
obo:ECO_0005585c
obo:ECO_0006195c

medical imaging evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001097
Super-classes obo:ECO_0000324c
Sub-classes obo:ECO_0001231c
obo:ECO_0007434c

microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001098
Description

Microscopy may include any of the following: optical, electron, scanning probe, or X-ray.

Super-classes obo:ECO_0000324c
Restrictions obo:OBI_0000312op some (obo:OBI_0000185c and n6d93943533d34a84b8c3678390dd5edfb1082c)
Sub-classes obo:ECO_0006271c
obo:ECO_0000087c
obo:ECO_0007435c
obo:ECO_0007049c
obo:ECO_0001589c
obo:ECO_0001232c
obo:ECO_0007047c
obo:ECO_0007051c
obo:ECO_0007053c
obo:ECO_0005587c
obo:ECO_0007055c
obo:ECO_0005578c
obo:ECO_0005588c
obo:ECO_0005033c

motility wound healing assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001099
Super-classes obo:ECO_0001565c
Restrictions obo:OBI_0000312op some obo:OBI_0000978c
obo:IAO_0000136op some obo:GO_0042060c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1089c)
Sub-classes obo:ECO_0007436c
obo:ECO_0001233c

MTS assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001100
Super-classes obo:ECO_0005034c
Restrictions obo:IAO_0000136op some obo:GO_0008283c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1097c)
obo:OBI_0000312op some obo:OBI_0000443c
Sub-classes obo:ECO_0001234c
obo:ECO_0007437c

MTT assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001101
Super-classes obo:ECO_0005034c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1104c)
obo:IAO_0000136op some obo:GO_0008283c
obo:OBI_0000312op some obo:OBI_0000443c
Sub-classes obo:ECO_0007438c
obo:ECO_0001235c

multiplex bead-based immunoassay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001102
Super-classes obo:ECO_0005517c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1110c)
obo:OBI_0000312op some obo:OBI_0000443c
Sub-classes obo:ECO_0007439c
obo:ECO_0001236c

natural variation mutant evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001103
Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0001237c
obo:ECO_0007440c

nuclear fragmentation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001104
Super-classes obo:ECO_0005034c
Restrictions obo:IAO_0000136op some obo:GO_0007576c
Sub-classes obo:ECO_0001239c
obo:ECO_0007442c

nuclear magnetic resonance evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001105
Super-classes obo:ECO_0006252c
Sub-classes obo:ECO_0006163c
obo:ECO_0001238c
obo:ECO_0006166c
obo:ECO_0007441c

nuclease protection assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001106
Super-classes obo:ECO_0005518c
Restrictions obo:OBI_0000312op some (obo:OBI_0000424c and obo:OBI_0001670c)
Sub-classes obo:ECO_0007316c
obo:ECO_0005521c
obo:ECO_0001240c
obo:ECO_0000110c

nucleotide analog incorporation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001107
Super-classes obo:ECO_0005008c
Sub-classes obo:ECO_0001018c
obo:ECO_0001241c
obo:ECO_0007354c

phage display evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001108
Super-classes obo:ECO_0000024c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1123c)
obo:IAO_0000136op some obo:GO_0005515c
obo:OBI_0000312op some obo:OBI_0001476c
Sub-classes obo:ECO_0007443c
obo:ECO_0001242c

phosphoamino acid analysis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001109
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007444c
obo:ECO_0001243c

peptide affinity enrichment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001110
Super-classes obo:ECO_0000023c
Restrictions obo:OBI_0000312op some obo:OBI_0001591c
obo:IAO_0000136op some (obo:GO_0005488c and n6d93943533d34a84b8c3678390dd5edfb1128c)
Sub-classes obo:ECO_0001244c
obo:ECO_0007445c

physical examination evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001111
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001246c
obo:ECO_0007447c

peptide array evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001112
Super-classes obo:ECO_0000024c
Restrictions obo:OBI_0000312op some obo:OBI_0000288c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1135c)
Sub-classes obo:ECO_0001245c
obo:ECO_0007446c

point mutation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001113
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0001247c
obo:ECO_0005508c
obo:ECO_0007448c
obo:ECO_0005507c
obo:ECO_0005506c

propidium iodide staining evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001114
Super-classes obo:ECO_0005019c
Sub-classes obo:ECO_0007449c
obo:ECO_0001248c

fluorescence evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001115
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some (obo:OBI_0001501c and n6d93943533d34a84b8c3678390dd5edfb1141c)
Sub-classes obo:ECO_0006034c
obo:ECO_0001811c
obo:ECO_0007847c
obo:ECO_0006274c
obo:ECO_0006066c
obo:ECO_0007017c
obo:ECO_0001249c
obo:ECO_0006273c
obo:ECO_0006271c
obo:ECO_0007450c
obo:ECO_0006261c

protein dot blot assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001116
Super-classes obo:ECO_0005517c
Sub-classes obo:ECO_0007451c
obo:ECO_0001250c

protein microarray evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001117
Super-classes obo:ECO_0005517c
Sub-classes obo:ECO_0007452c
obo:ECO_0001251c

protein sequencing assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001118
Super-classes obo:ECO_0000220c
Sub-classes obo:ECO_0001252c
obo:ECO_0007453c

quantitative mass spectrometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001119
Super-classes obo:ECO_0001096c
Sub-classes obo:ECO_0007454c
obo:ECO_0001253c

radioisotope assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001120
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some (obo:OBI_0000201c and n6d93943533d34a84b8c3678390dd5edfb1152c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1146c)
obo:OBI_0000312op some (obo:OBI_0000201c and n6d93943533d34a84b8c3678390dd5edfb1152c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1146c)
Sub-classes obo:ECO_0001254c
obo:ECO_0007455c
obo:ECO_0007844c

radioimmunoassay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001121
Super-classes obo:ECO_0005517c
Sub-classes obo:ECO_0007456c
obo:ECO_0001255c

resonant mirror biosensor evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001123
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001271c
obo:ECO_0007471c

restriction fragment detection evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001124
Super-classes obo:ECO_0005519c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1157c and obo:OBI_0000435c and n6d93943533d34a84b8c3678390dd5edfb1163c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1157c and obo:OBI_0000435c and n6d93943533d34a84b8c3678390dd5edfb1163c)
Sub-classes obo:ECO_0007457c
obo:ECO_0001257c

spectrophotometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001126
Super-classes obo:ECO_0005504c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1168c)
Sub-classes obo:ECO_0006259c
obo:ECO_0007458c
obo:ECO_0001258c
obo:ECO_0006191c

surface plasmon resonance evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001127
Description

Plasmons are generated by an incident light beam.

Super-classes obo:ECO_0000021c
Restrictions obo:OBI_0000312op some obo:OBI_0000923c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1174c)
Sub-classes obo:ECO_0001269c
obo:ECO_0007469c

syngeneic transplantation experiment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001128
Super-classes obo:ECO_0000059c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1183c)
Sub-classes obo:ECO_0007459c
obo:ECO_0001259c

TACE activity assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001129
Super-classes obo:ECO_0000005c
Restrictions obo:OBI_0000312op some obo:OBI_0000443c
obo:IAO_0000136op some obo:GO_1990774c
Sub-classes obo:ECO_0007467c
obo:ECO_0001268c

tissue microarray evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001130
Super-classes obo:ECO_0001035c
Restrictions obo:OBI_0000312op some (obo:OBI_0001985c and n6d93943533d34a84b8c3678390dd5edfb1190c)
Sub-classes obo:ECO_0007466c
obo:ECO_0001267c

transgenic organism evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001131
Super-classes obo:ECO_0005027c
Restrictions obo:OBI_0000312op some (obo:OBI_0000966c and n6d93943533d34a84b8c3678390dd5edfb1199c)
Sub-classes obo:ECO_0001266c
obo:ECO_0007465c

tryptic phosphopeptide mapping assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001132
Super-classes obo:ECO_0001096c
Restrictions obo:OBI_0000312op some obo:OBI_0002035c
Sub-classes obo:ECO_0007464c
obo:ECO_0001265c

terminal deoxynucleotidyl transferase dUTP nick end labeling assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001133
Super-classes obo:ECO_0005034c
Sub-classes obo:ECO_0001264c
obo:ECO_0007463c

urine test evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001134
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1206c)
obo:OBI_0000312op some obo:OBI_0000443c
Sub-classes obo:ECO_0001263c
obo:ECO_0007462c

WST-1 assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001136
Super-classes obo:ECO_0005007c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1215c and obo:OBI_0000443c and obo:OBI_0000891c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1215c and obo:OBI_0000443c and obo:OBI_0000891c)
Sub-classes obo:ECO_0001261c
obo:ECO_0007461c

xenotransplantation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001137
Super-classes obo:ECO_0000240c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1224c)
Sub-classes obo:ECO_0001260c
obo:ECO_0007460c

3D cell culture evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001138
Super-classes obo:ECO_0000314c
obo:ECO_0001001c

51Cr release assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001139
Super-classes obo:ECO_0001004c
obo:ECO_0000314c

7-aminoactinomycin staining evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001140
Super-classes obo:ECO_0000314c
obo:ECO_0001005c

[3H]-thymidine incorporation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001141
Super-classes obo:ECO_0001003c
obo:ECO_0000314c

[3H]arachidonic acid release assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001142
Super-classes obo:ECO_0001002c
obo:ECO_0000314c

adhesion assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001143
Super-classes obo:ECO_0001006c
obo:ECO_0000314c

adoptive cell transfer evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001144
Super-classes obo:ECO_0001007c
obo:ECO_0000314c

alamarBlue assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001145
Super-classes obo:ECO_0001008c
obo:ECO_0000314c

allograft transplantation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001146
Super-classes obo:ECO_0007634c
obo:ECO_0001009c

anion-exchange chromatography evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001147
Super-classes obo:ECO_0007680c
obo:ECO_0001010c

annexin-V staining evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001148
Super-classes obo:ECO_0001011c
obo:ECO_0000314c

cognitive assay phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001149
Super-classes obo:ECO_0007634c
obo:ECO_0001012c

blocking monoclonal antibody evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001150
Super-classes obo:ECO_0001013c
obo:ECO_0006078c

blocking peptide evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001151
Super-classes obo:ECO_0006078c
obo:ECO_0001014c

blocking polyclonal antibody evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001152
Super-classes obo:ECO_0001015c
obo:ECO_0006078c

blood test evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001153
Super-classes obo:ECO_0000314c
obo:ECO_0001016c

Boyden chamber assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001154
Super-classes obo:ECO_0000314c
obo:ECO_0001017c

bromodeoxyuridine incorporation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001155
Super-classes obo:ECO_0001018c
obo:ECO_0001241c

caspase assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001156
Super-classes obo:ECO_0001019c
obo:ECO_0000314c

cell counting evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001157
Super-classes obo:ECO_0000314c
obo:ECO_0001020c

cell permeability assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001158
Super-classes obo:ECO_0001021c
obo:ECO_0000314c

carboxyfluorescein diacetate succinimidyl ester staining evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001159
Super-classes obo:ECO_0001022c
obo:ECO_0000314c

chemiluminescence-linked immunoassay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001160
Super-classes obo:ECO_0001023c
obo:ECO_0000269c

chimeric protein phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001161
Super-classes obo:ECO_0001024c
obo:ECO_0000315c

co-electrophoresis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001162
Super-classes obo:ECO_0000314c
obo:ECO_0001025c

co-localization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001163
Super-classes obo:ECO_0001026c
obo:ECO_0001256c

co-sedimentation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001164
Super-classes obo:ECO_0001028c
obo:ECO_0000353c

colony counting evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001165
Super-classes obo:ECO_0001027c
obo:ECO_0000314c

comet assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001166
Super-classes obo:ECO_0000314c
obo:ECO_0001029c

conditional knockin evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001167
Super-classes obo:ECO_0001031c
obo:ECO_0001224c

conditional knockout evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001168
Super-classes obo:ECO_0001030c
obo:ECO_0001225c

constitutively active mutant evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001169
Super-classes obo:ECO_0007634c
obo:ECO_0001032c

cross-linking evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001170
Super-classes obo:ECO_0006076c
obo:ECO_0001033c

crystallography evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001171
Super-classes obo:ECO_0001034c
obo:ECO_0000269c
Sub-classes obo:ECO_0005670c

cytochemistry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001172
Super-classes obo:ECO_0001185c
obo:ECO_0001035c
Sub-classes obo:ECO_0001267c

cytochrome C release assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001173
Super-classes obo:ECO_0001036c
obo:ECO_0000314c

4',6-diamidino-2-phenylindole staining evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001174
Super-classes obo:ECO_0001037c
obo:ECO_0000314c

deletion mutation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001175
Super-classes obo:ECO_0001038c
obo:ECO_0000315c

DNA laddering assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001176
Super-classes obo:ECO_0001039c
obo:ECO_0000314c

RNA dot blot assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001177
Super-classes obo:ECO_0001040c
obo:ECO_0000269c

dominant-negative mutant phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001179
Super-classes obo:ECO_0000315c
obo:ECO_0001042c

eTag assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001180
Super-classes obo:ECO_0001045c
obo:ECO_0006075c

filter binding assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001181
Super-classes obo:ECO_0000353c
obo:ECO_0001046c

fluorescence in situ hybridization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001182
Super-classes obo:ECO_0000314c
obo:ECO_0001047c
obo:ECO_0001838c

fluorescence resonance energy transfer evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001183
Super-classes obo:ECO_0006327c
obo:ECO_0001048c

gel-filtration evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001184
Super-classes obo:ECO_0001049c
obo:ECO_0007680c

histochemistry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001185
Super-classes obo:ECO_0001187c
obo:ECO_0001050c
Sub-classes obo:ECO_0001172c

immunocytochemistry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001186
Super-classes obo:ECO_0000269c
obo:ECO_0001053c

histology evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001187
Super-classes obo:ECO_0001051c
obo:ECO_0001256c
Sub-classes obo:ECO_0001185c

immunodepletion evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001188
Super-classes obo:ECO_0001054c
obo:ECO_0006078c

immunohistochemistry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001189
Super-classes obo:ECO_0001055c
obo:ECO_0000269c

in vitro acetylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001190
Super-classes obo:ECO_0001057c
obo:ECO_0000314c

in vitro cleavage assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001191
Super-classes obo:ECO_0000314c
obo:ECO_0001058c

in vitro deacetylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001192
Super-classes obo:ECO_0000314c
obo:ECO_0001060c

in vitro defarnesylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001193
Super-classes obo:ECO_0001061c
obo:ECO_0000314c

in vitro demethylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001194
Super-classes obo:ECO_0000314c
obo:ECO_0001062c

in vitro desumoylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001195
Super-classes obo:ECO_0001063c
obo:ECO_0000314c

in vitro deubiquitination assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001196
Super-classes obo:ECO_0001059c
obo:ECO_0000314c

in vitro farnesylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001197
Super-classes obo:ECO_0000314c
obo:ECO_0001064c

in vitro methylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001198
Super-classes obo:ECO_0000314c
obo:ECO_0001065c
Sub-classes obo:ECO_0000274c
obo:ECO_0007100c
obo:ECO_0007102c

in vitro palmitoylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001199
Super-classes obo:ECO_0000314c
obo:ECO_0001066c

in vitro phosphatase assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001200
Super-classes obo:ECO_0000314c
obo:ECO_0001067c

in vitro polyADP-ribosylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001201
Super-classes obo:ECO_0001069c
obo:ECO_0000314c

in vitro protein kinase assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001202
Super-classes obo:ECO_0001068c
obo:ECO_0005801c

in vitro sumoylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001203
Super-classes obo:ECO_0001070c
obo:ECO_0000314c

in vitro transcription assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001204
Super-classes obo:ECO_0000314c
obo:ECO_0001071c

in vitro translation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001205
Super-classes obo:ECO_0001072c
obo:ECO_0000314c

in vitro ubiquitination assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001206
Super-classes obo:ECO_0000314c
obo:ECO_0001073c

in vivo acetylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001207
Super-classes obo:ECO_0000314c
obo:ECO_0001074c

in vivo cleavage assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001208
Super-classes obo:ECO_0001075c
obo:ECO_0000314c

in vivo deacetylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001209
Super-classes obo:ECO_0000314c
obo:ECO_0001076c

in vivo defarnesylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001210
Super-classes obo:ECO_0000314c
obo:ECO_0001077c

in vivo demethylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001211
Super-classes obo:ECO_0001078c
obo:ECO_0000314c

in vivo desumoylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001212
Super-classes obo:ECO_0001080c
obo:ECO_0000314c

in vivo deubiquitination assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001213
Super-classes obo:ECO_0000314c
obo:ECO_0001079c

in vivo farnesylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001214
Super-classes obo:ECO_0000314c
obo:ECO_0001081c

in vivo methylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001215
Super-classes obo:ECO_0001082c
obo:ECO_0000314c

in vivo palmitoylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001216
Super-classes obo:ECO_0001083c
obo:ECO_0000314c

in vivo phosphatase assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001217
Super-classes obo:ECO_0000314c
obo:ECO_0001084c

in vivo protein kinase assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001218
Super-classes obo:ECO_0001085c
obo:ECO_0005801c

in vivo sumoylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001219
Super-classes obo:ECO_0000314c
obo:ECO_0001086c

in vivo transcription assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001220
Super-classes obo:ECO_0000314c
obo:ECO_0001087c

in vivo translation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001221
Super-classes obo:ECO_0001088c
obo:ECO_0000314c

in vivo ubiquitination assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001222
Super-classes obo:ECO_0001089c
obo:ECO_0000314c

induced mutation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001223

knockin evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001224
Super-classes obo:ECO_0006049c
obo:ECO_0001090c
Sub-classes obo:ECO_0001167c

knockout evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001225
Super-classes obo:ECO_0001091c
obo:ECO_0006049c
Sub-classes obo:ECO_0001168c
obo:ECO_0005668c

lipid binding assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001226
Super-classes obo:ECO_0001092c
obo:ECO_0000353c

luminescence-based mammalian interactome mapping assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001227
Super-classes obo:ECO_0000353c
obo:ECO_0001093c

macroscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001228
Super-classes obo:ECO_0000269c
obo:ECO_0001094c

mammalian 2-hybrid assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001229
Super-classes obo:ECO_0001095c
obo:ECO_0006077c

mass spectrometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001230
Super-classes obo:ECO_0001096c
obo:ECO_0000269c
Sub-classes obo:ECO_0005586c
obo:ECO_0001588c
obo:ECO_0007184c
obo:ECO_0006283c
obo:ECO_0001265c
obo:ECO_0001582c
obo:ECO_0006236c
obo:ECO_0001253c

medical imaging evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001231
Super-classes obo:ECO_0001256c
obo:ECO_0001097c

microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001232
Super-classes obo:ECO_0001098c
obo:ECO_0001256c
Sub-classes obo:ECO_0007054c
obo:ECO_0007048c
obo:ECO_0006003c
obo:ECO_0007050c
obo:ECO_0007052c
obo:ECO_0006031c
obo:ECO_0006323c
obo:ECO_0006004c
obo:ECO_0005590c
obo:ECO_0005589c
obo:ECO_0007056c

motility wound healing assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001233
Super-classes obo:ECO_0001099c
obo:ECO_0000314c

MTS assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001234
Super-classes obo:ECO_0001100c
obo:ECO_0000314c

MTT assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001235
Super-classes obo:ECO_0000314c
obo:ECO_0001101c

multiplex bead-based immunoassay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001236
Super-classes obo:ECO_0000269c
obo:ECO_0001102c

natural variation mutant evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001237
Super-classes obo:ECO_0001103c
obo:ECO_0007634c
Sub-classes obo:ECO_0007191c
obo:ECO_0005613c

nuclear magnetic resonance evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001238
Super-classes obo:ECO_0001105c
obo:ECO_0006285c
Sub-classes obo:ECO_0006168c
obo:ECO_0006165c

nuclear fragmentation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001239
Super-classes obo:ECO_0001104c
obo:ECO_0000314c

nuclease protection assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001240
Super-classes obo:ECO_0001106c
obo:ECO_0000269c
Sub-classes obo:ECO_0005666c
obo:ECO_0000288c

nucleotide analog incorporation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001241
Super-classes obo:ECO_0001107c
obo:ECO_0000314c
Sub-classes obo:ECO_0001155c

phage display evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001242
Super-classes obo:ECO_0001108c
obo:ECO_0006076c

phosphoamino acid analysis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001243
Super-classes obo:ECO_0000314c
obo:ECO_0001109c

peptide affinity enrichment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001244
Super-classes obo:ECO_0006075c
obo:ECO_0001110c

peptide array evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001245
Super-classes obo:ECO_0006076c
obo:ECO_0001112c

physical examination evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001246
Super-classes obo:ECO_0001111c
obo:ECO_0000314c

point mutation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001247
Super-classes obo:ECO_0001113c
obo:ECO_0000315c
Sub-classes obo:ECO_0007162c
obo:ECO_0007161c
obo:ECO_0007160c

propidium iodide staining evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001248
Super-classes obo:ECO_0000314c
obo:ECO_0001114c

fluorescence evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001249
Super-classes obo:ECO_0000314c
obo:ECO_0001115c
Sub-classes obo:ECO_0006303c
obo:ECO_0006329c
obo:ECO_0007849c
obo:ECO_0007018c
obo:ECO_0006327c
obo:ECO_0006067c
obo:ECO_0006035c
obo:ECO_0005632c
obo:ECO_0006323c

protein dot blot assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001250
Super-classes obo:ECO_0000269c
obo:ECO_0001116c

protein microarray evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001251
Super-classes obo:ECO_0000269c
obo:ECO_0001117c

protein sequencing assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001252
Super-classes obo:ECO_0000269c
obo:ECO_0001118c

quantitative mass spectrometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001253
Super-classes obo:ECO_0001119c
obo:ECO_0001230c

radioisotope assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001254
Super-classes obo:ECO_0001120c
obo:ECO_0000314c
Sub-classes obo:ECO_0007846c

radioimmunoassay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001255
Super-classes obo:ECO_0001121c
obo:ECO_0000269c

imaging assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001256
Super-classes obo:ECO_0000324c
obo:ECO_0000314c
Sub-classes obo:ECO_0001231c
obo:ECO_0001163c
obo:ECO_0001187c
obo:ECO_0001232c

restriction fragment detection evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001257
Super-classes obo:ECO_0000269c
obo:ECO_0001124c

spectrophotometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001258
Super-classes obo:ECO_0000269c
obo:ECO_0001126c
Sub-classes obo:ECO_0006228c
obo:ECO_0006299c

syngeneic transplantation experiment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001259
Super-classes obo:ECO_0007634c
obo:ECO_0001128c

xenotransplantation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001260
Super-classes obo:ECO_0001137c
obo:ECO_0007634c

WST-1 assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001261
Super-classes obo:ECO_0001136c
obo:ECO_0000314c

urine test evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001263
Super-classes obo:ECO_0001134c
obo:ECO_0000314c

terminal deoxynucleotidyl transferase dUTP nick end labeling assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001264
Super-classes obo:ECO_0001133c
obo:ECO_0000314c

tryptic phosphopeptide mapping assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001265
Super-classes obo:ECO_0001230c
obo:ECO_0001132c

transgenic organism evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001266
Super-classes obo:ECO_0001131c
obo:ECO_0006049c

tissue microarray evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001267
Super-classes obo:ECO_0001130c
obo:ECO_0001172c

TACE activity assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001268
Super-classes obo:ECO_0001129c
obo:ECO_0005801c

surface plasmon resonance evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001269
Super-classes obo:ECO_0001127c
obo:ECO_0000353c

restriction landmark genomic scanning evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001270
Super-classes obo:ECO_0000089c
obo:ECO_0000269c

resonant mirror biosensor evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001271
Super-classes obo:ECO_0001123c
obo:ECO_0000314c

high-performance liquid chromatography evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001272
Super-classes obo:ECO_0001052c
obo:ECO_0007680c

ectopic expression evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001273
Super-classes obo:ECO_0000017c
obo:ECO_0007634c
Sub-classes obo:ECO_0006002c

small molecule detection assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001522
Super-classes obo:ECO_0005516c
Sub-classes obo:ECO_0007820c
obo:ECO_0007740c

localization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001533
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007724c
obo:ECO_0000122c
obo:ECO_0001534c
obo:ECO_0007806c

nucleic acid localization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001534
Super-classes obo:ECO_0001533c
Sub-classes obo:ECO_0007727c
obo:ECO_0001047c
obo:ECO_0007809c

acetylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001546
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007794c
obo:ECO_0007713c
obo:ECO_0001057c
obo:ECO_0001074c

cleavage assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001547
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007782c
obo:ECO_0007691c
obo:ECO_0001075c
obo:ECO_0001058c

deacetylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001548
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001060c
obo:ECO_0007692c
obo:ECO_0001076c
obo:ECO_0007771c

defarnesylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001549
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001077c
obo:ECO_0001061c
obo:ECO_0007790c
obo:ECO_0007710c

demethylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001550
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001062c
obo:ECO_0001078c
obo:ECO_0007795c
obo:ECO_0007714c

desumoylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001551
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001063c
obo:ECO_0001080c
obo:ECO_0007720c
obo:ECO_0007802c

deubiquitination assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001552
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007711c
obo:ECO_0007791c
obo:ECO_0001059c
obo:ECO_0001079c

farnesylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001553
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007721c
obo:ECO_0001081c
obo:ECO_0007800c
obo:ECO_0001064c

methylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001554
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007704c
obo:ECO_0007783c
obo:ECO_0001082c
obo:ECO_0001065c

palmitoylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001555
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007712c
obo:ECO_0007792c
obo:ECO_0001083c
obo:ECO_0001066c

phosphatase assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001556
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001067c
obo:ECO_0001084c
obo:ECO_0007772c
obo:ECO_0007694c

polyADP-ribosylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001557
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001069c
obo:ECO_0007715c
obo:ECO_0007797c
obo:ECO_0005500c

protein kinase assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001558
Super-classes obo:ECO_0000005c
Sub-classes obo:ECO_0007687c
obo:ECO_0005562c
obo:ECO_0001068c
obo:ECO_0001085c
obo:ECO_0007767c

sumoylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001559
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001086c
obo:ECO_0007708c
obo:ECO_0001070c
obo:ECO_0007788c

single-cell RNA-sequencing evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_000156
Super-classes obo:ECO_0006069c
obo:ECO_0001560c

single-cell RNA-sequencing evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001560
Super-classes obo:ECO_0000295c
Sub-classes obo:ECO_0001570c
obo:ECO_000156c

translation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001561
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001072c
obo:ECO_0007799c
obo:ECO_0007717c
obo:ECO_0001088c

ubiquitination assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001562
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001089c
obo:ECO_0007801c
obo:ECO_0007718c
obo:ECO_0001073c

cell growth assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001563
Super-classes obo:ECO_0001565c
Restrictions obo:OBI_0000312op some (obo:OBI_0000964c and obo:OBI_0000978c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1766c)
obo:IAO_0000136op some obo:GO_0016049c
obo:OBI_0000312op some (obo:OBI_0000964c and obo:OBI_0000978c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1766c)
Sub-classes obo:ECO_0007083c
obo:ECO_0007699c
obo:ECO_0007039c
obo:ECO_0007778c
obo:ECO_0000095c

cell-based assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001565
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0005012c
obo:ECO_0005007c
obo:ECO_0001603c
obo:ECO_0006269c
obo:ECO_0001099c
obo:ECO_0005034c
obo:ECO_0007695c
obo:ECO_0005021c
obo:ECO_0001020c
obo:ECO_0001845c
obo:ECO_0007773c
obo:ECO_0001002c
obo:ECO_0001021c
obo:ECO_0001006c
obo:ECO_0005004c
obo:ECO_0001563c

quantitative reverse transcription polymerase chain reaction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001566
Super-classes obo:ECO_0000109c
Sub-classes obo:ECO_0001568c
obo:ECO_0001567c

quantitative reverse transcription polymerase chain reaction evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001567
Super-classes obo:ECO_0001808c
obo:ECO_0001566c

quantitative reverse transcription polymerase chain reaction evidence used in automatic assertion.c # Classes

URI http://purl.obolibrary.org/obo/ECO_0001568
Super-classes obo:ECO_0001566c
obo:ECO_0007475c

colony diameter phenotype evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_000157
Super-classes obo:ECO_0001571c
obo:ECO_0007082c

single-cell RNA-sequencing evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001570
Super-classes obo:ECO_0006068c
obo:ECO_0001560c

colony diameter phenotype evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001571
Super-classes obo:ECO_0007081c
Sub-classes obo:ECO_000157c
obo:ECO_0001572c

colony diameter phenotype evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001572
Super-classes obo:ECO_0001571c
obo:ECO_0007627c

membrane fusion assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001574
Description

Measurements can include but are not limited to: synaptic transmission, fertilization, and viral entry.

Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0001576c
obo:ECO_0001577c
obo:ECO_0001575c

membrane fusion assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001575
Super-classes obo:ECO_0007307c
obo:ECO_0001574c
Sub-classes obo:ECO_0001578c

membrane fusion assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001576
Super-classes obo:ECO_0001574c
obo:ECO_0000314c
Sub-classes obo:ECO_0001579c

spheroplast fusion assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001577
Description

A spheroplast is a Gram-negative bacterium cell in which the cell wall has been almost completely removed.

Super-classes obo:ECO_0001574c
Sub-classes obo:ECO_0001578c
obo:ECO_0001579c

spheroplast fusion assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001578
Super-classes obo:ECO_0001577c
obo:ECO_0001575c

spheroplast fusion assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001579
Super-classes obo:ECO_0001577c
obo:ECO_0001576c

liquid chromatography coupled with tandem mass spectrometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001580
Super-classes obo:ECO_0001096c
Sub-classes obo:ECO_0001581c
obo:ECO_0001582c

liquid chromatography coupled with tandem mass spectrometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001581
Super-classes obo:ECO_0007433c
obo:ECO_0001580c

liquid chromatography coupled with tandem mass spectrometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001582
Super-classes obo:ECO_0001230c
obo:ECO_0001580c

small interfering RNA knockdown evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001583
Super-classes obo:ECO_0000018c
Sub-classes obo:ECO_0001585c
obo:ECO_0001584c

small interfering RNA knockdown evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001584
Super-classes obo:ECO_0001583c
obo:ECO_0007556c

small interfering RNA knockdown evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001585
Super-classes obo:ECO_0006050c
obo:ECO_0001583c

ion trap mass spectrometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001586
Super-classes obo:ECO_0001096c
Sub-classes obo:ECO_0001588c
obo:ECO_0001587c

ion trap mass spectrometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001587
Super-classes obo:ECO_0001586c
obo:ECO_0007433c

ion trap mass spectrometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001588
Super-classes obo:ECO_0001230c
obo:ECO_0001586c

atomic force microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001589
Description

Atomic force microscopy can be used for force measurement (force spectroscopy), imaging (rendering a three-dimensional shape (topography), and manipulation of the sample.

Super-classes obo:ECO_0001098c
Sub-classes obo:ECO_0001590c
obo:ECO_0001591c

atomic force microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001590
Super-classes obo:ECO_0001589c

atomic force microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001591
Super-classes obo:ECO_0001589c

polysome profiling evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001592
Description

Once isolated, gel electrophoresis, immunoblot, and other protein profiling techniques can be applied to garner more information.

Super-classes obo:ECO_0000006c
Sub-classes obo:ECO_0001593c
obo:ECO_0001594c

polysome profiling evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001593
Super-classes obo:ECO_0001592c
obo:ECO_0007297c

polysome profiling evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001594
Super-classes obo:ECO_0001592c
obo:ECO_0000269c

multilocus sequence typing evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001598
Description

See PMID:24713082 for use example.

Super-classes obo:ECO_0000219c
Sub-classes obo:ECO_0001599c
obo:ECO_0001600c

multilocus sequence typing evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001599
Super-classes obo:ECO_0007813c
obo:ECO_0001598c

multilocus sequence typing evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001600
Super-classes obo:ECO_0000269c
obo:ECO_0001598c

protein-oligonucleotide microarray binding evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001601
Super-classes obo:ECO_0000136c
obo:ECO_0000024c
Restrictions obo:IAO_0000136op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1861c and obo:GO_0003676c and n6d93943533d34a84b8c3678390dd5edfb1855c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1861c and obo:GO_0003676c and n6d93943533d34a84b8c3678390dd5edfb1855c)
obo:OBI_0000312op some obo:OBI_0001318c
Sub-classes obo:ECO_0007577c
obo:ECO_0006090c

cell staining evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001603
Super-classes obo:ECO_0001565c
Sub-classes obo:ECO_0007157c
obo:ECO_0007261c

alkaline phosphatase reporter gene assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001801
Description

Alkaline phosphatase reporter assay produces a hybrid protein with alkaline phosphatase activity following transportation across the cellular membrane.

Super-classes obo:ECO_0000049c
Sub-classes obo:ECO_0005615c
obo:ECO_0007499c

beta-galactosidase reporter gene assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001802
Description

The assay is often performed using a plasmid borne construction on a lacZ strain.

Super-classes obo:ECO_0000049c
Sub-classes obo:ECO_0007500c
obo:ECO_0005616c

chloramphenicol acetyltransferase reporter gene assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001803
Description

The amount of acetylated chloramphenicol is directly proportional to the amount of CAT enzyme present.

Super-classes obo:ECO_0000049c
Sub-classes obo:ECO_0005617c
obo:ECO_0007501c

beta-glucuronidase reporter gene assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001804
Super-classes obo:ECO_0000049c
Sub-classes obo:ECO_0005641c
obo:ECO_0007512c

luciferase reporter gene assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001805
Super-classes obo:ECO_0000049c
Sub-classes obo:ECO_0005648c
obo:ECO_0007516c

chromatin immunoprecipitation- exonuclease evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001806
Super-classes obo:ECO_0000226c
Restrictions obo:OBI_0000312op some obo:OBI_0001925c
Sub-classes obo:ECO_0006008c
obo:ECO_0005619c

electrophoretic mobility shift assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001807
Super-classes obo:ECO_0000353c
obo:ECO_0000096c

reverse transcription polymerase chain reaction evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001808
Super-classes obo:ECO_0000269c
obo:ECO_0000109c
Sub-classes obo:ECO_0001567c

DNA affinity chromatography evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001809
Description

Biotinylation is commonly used for labeling and beads are commonly used as the matrix. Bound protein will remain attached to the beads. Results can be detected through gel electrophoresis and then sequenced by mass-spectrometry. This technique can be used to demonstrate binding of a purified protein, or to purify the binding protein from crude extract or protein mixture.

Super-classes obo:ECO_0000325c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1876c)
Sub-classes obo:ECO_0007506c
obo:ECO_0005629c

DNAse footprinting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001810
Description

In DNAse footingprinting amplified DNA combined with TF and DNAse is electrophoresed for fragment comparison with a non-TF control sample. TF-bound fragments do not appear in the gel. Such fragments can be isolated, purified, and sequenced. This technique is often used to identify the binding motif of a TF resolving the protected region to 50-100 bp which can be further examined for TF-binding sites.

Super-classes obo:ECO_0000136c
Sub-classes obo:ECO_0007507c
obo:ECO_0005631c

fluorescence anisotropy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001811
Description

The degree of polarization of a fluorophore is inversely related to its molecular rotation. When the fluorophore is bound to a small molecule, the rate at which it tumbles can decrease significantly from when it is bound tightly to a large protein. If the fluorophore is attached to the larger protein in a binding pair, the difference in polarization between bound and unbound states will be smaller and less accurate. The degree of binding is calculated by using the difference in anisotropy of the partially bound, free, and fully bound states measured by titrating the two binding partners. Fluorescence polarixation assays are homogeneous.

Super-classes obo:ECO_0001115c
Restrictions obo:OBI_0000312op some obo:OBI_0001025c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1890c)
Sub-classes obo:ECO_0007508c
obo:ECO_0005632c

genomic systematic evolution of ligands by exponential amplification evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001812
Description

The reported sequences should always be verified for presence in the genome sequence.

Super-classes obo:ECO_0000293c
Sub-classes obo:ECO_0005635c
obo:ECO_0005634c

heteronuclear single quantum coherence spectroscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001813
Description

Chemical shifts in the spectrum indicating binding can be detected from analysis of a protein spectrum in the presence or absence of its cognate DNA binding site.

Super-classes obo:ECO_0006163c
Sub-classes obo:ECO_0007513c
obo:ECO_0005642c

methidiumpropyl-ethylenediaminetetraacetic acid iron (II) footprinting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001814
Super-classes obo:ECO_0000136c
Sub-classes obo:ECO_0007517c
obo:ECO_0005652c

copper-phenanthroline footprinting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001815
Super-classes obo:ECO_0000136c
Sub-classes obo:ECO_0007504c
obo:ECO_0005626c

green fluorescent protein reporter gene assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001816
Super-classes obo:ECO_0000049c
Sub-classes obo:ECO_0005636c
obo:ECO_0005637c

glutathione S-transferase pull-down assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001817
Description

The recombinant protein can also be eluted following the pull-down and analyzed further with qPCR or sequencing.

Super-classes obo:ECO_0000025c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1897c)
obo:OBI_0000312op some obo:OBI_0001700c
Sub-classes obo:ECO_0005640c
obo:ECO_0007511c

hydroxyl-radical footprinting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001818
Super-classes obo:ECO_0000136c
Sub-classes obo:ECO_0005643c
obo:ECO_0007514c

primer extension assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001819
Description

The most commonly used radiolabel is 32P.

Super-classes obo:ECO_0000009c
Sub-classes obo:ECO_0007520c
obo:ECO_0005657c

rapid amplification of cDNA ends polymerase chain reaction evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001820
Description

RACE PCR is frequently used to verify transcription start sites relevant to the function of transcription factor binding sites such as repression.

Super-classes obo:ECO_0000219c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1907c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1902c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1913c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1907c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1902c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1913c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1907c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1902c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1913c)
Sub-classes obo:ECO_0007522c
obo:ECO_0005661c

RNA sequencing assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001821
Description

Use ECO:0000295 (RNA-seq evidence) in place of this term.

survival rate analysis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001822
Super-classes obo:ECO_0001091c
Restrictions obo:OBI_0000312op some obo:OBI_0000699c
obo:IAO_0000136op some obo:OBI_0600054c
Sub-classes obo:ECO_0007525c
obo:ECO_0005668c

x-ray crystallography evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001823
Description

X-ray crystallography can be used for a crystal used to probe at the tridimensional structure of proteins. In some cases, it is possible to co-crystallize the protein bound to its DNA binding site, providing detail on the particular arrangement of the two components.

Super-classes obo:ECO_0001034c
Restrictions obo:OBI_0000312op some obo:OBI_0000912c
Sub-classes obo:ECO_0005671c
obo:ECO_0005670c
obo:ECO_0006188c
obo:ECO_0006187c

DNA adenine methyltransferase identification evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001824
Description

The methylation tag is detected with methylation-sensitive restriction enzymes, DpnI and DpnII.

Super-classes obo:ECO_0000023c
Restrictions obo:IAO_0000136op some obo:GO_0008104c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1927c and obo:OBI_0001146c and n6d93943533d34a84b8c3678390dd5edfb1933c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1927c and obo:OBI_0001146c and n6d93943533d34a84b8c3678390dd5edfb1933c)
Sub-classes obo:ECO_0005628c
obo:ECO_0005627c

isothermal titration calorimetry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001825
Description

When ITC is used to study TF, the temperature of two identical cells containing a known concentration of TF is monitored. After the ligand is added to the cells in precisely measured aliquots, the temperature difference in each cell is observed to determine target binding. This value can be used to compute the energetics of the reaction and hence, binding affinity of the TF for the DNA fragment. The thermodynamic profile that is measured includes the values of binding constant (K(a)), stoichiometry (n), and the enthalpy of binding (DeltaH(b)).

Super-classes obo:ECO_0000023c
Restrictions obo:OBI_0000312op some obo:OBI_0001634c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1943c)
Sub-classes obo:ECO_0005647c
obo:ECO_0007515c

ultraviolet light footprinting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001826
Super-classes obo:ECO_0000136c
Sub-classes obo:ECO_0005669c
obo:ECO_0007526c

methylation interference footprinting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001827
Super-classes obo:ECO_0000136c
Sub-classes obo:ECO_0005656c
obo:ECO_0007519c

inference of sequence features from visual inspection used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001828
Super-classes obo:ECO_0007850c
obo:ECO_0007751c

ferric uptake regulator titration assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001829
Super-classes obo:ECO_0000049c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb1954c)
obo:OBI_0000312op some obo:OBI_0000913c
Sub-classes obo:ECO_0005633c
obo:ECO_0007509c

host colonization assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001830
Description

Has to do with the ability of the bacterium or virus to bind to a host.

Super-classes obo:ECO_0000006c
Sub-classes obo:ECO_0001833c
obo:ECO_0001832c
obo:ECO_0001831c

host colonization assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001831
Super-classes obo:ECO_0007297c
obo:ECO_0001830c
Sub-classes obo:ECO_0001834c

host colonization assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001832
Super-classes obo:ECO_0001830c
obo:ECO_0000269c
Sub-classes obo:ECO_0001835c

infection assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001833
Description

Has to do with the outcome of a bacterial or viral / host interaction, be it a measure of cell death, cytotoxicity, invasion, etc.

Super-classes obo:ECO_0001830c
Sub-classes obo:ECO_0001835c
obo:ECO_0001834c

infection assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001834
Super-classes obo:ECO_0001831c
obo:ECO_0001833c

infection assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001835
Super-classes obo:ECO_0001833c
obo:ECO_0001832c

in situ hybridization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001836
Super-classes obo:ECO_0000008c
Sub-classes obo:ECO_0001838c
obo:ECO_0001839c
obo:ECO_0001837c
obo:ECO_0001047c

in situ hybridization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001837
Super-classes obo:ECO_0001836c
obo:ECO_0007298c
Sub-classes obo:ECO_0001840c
obo:ECO_0007386c

in situ hybridization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001838
Super-classes obo:ECO_0001836c
obo:ECO_0000270c
Sub-classes obo:ECO_0001182c
obo:ECO_0001841c

colorimetric in situ hybridization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001839
Super-classes obo:ECO_0001836c
Sub-classes obo:ECO_0001840c
obo:ECO_0001841c

colorimetric in situ hybridization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001840
Super-classes obo:ECO_0001837c
obo:ECO_0001839c

colorimetric in situ hybridization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001841
Super-classes obo:ECO_0001839c
obo:ECO_0001838c

random mutagenesis of specific target DNA evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001842
Super-classes obo:ECO_0005529c
Sub-classes obo:ECO_0001843c
obo:ECO_0001844c

random mutagenesis of specific target DNA evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001843
Super-classes obo:ECO_0001842c
obo:ECO_0007478c

random mutagenesis of specific target DNA evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001844
Super-classes obo:ECO_0001842c
obo:ECO_0005530c

cell population optical density evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0001845
Super-classes obo:ECO_0001565c
Sub-classes obo:ECO_0001846c
obo:ECO_0001847c

cell population optical density evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001846
Super-classes obo:ECO_0001845c

cell population optical density evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0001847
Super-classes obo:ECO_0001845c

cell viability assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005004
Super-classes obo:ECO_0001565c
Restrictions obo:OBI_0000312op some obo:OBI_0001977c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2002c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2007c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2002c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2007c)
obo:IAO_0000136op some obo:GO_0009987c
Sub-classes obo:ECO_0001008c
obo:ECO_0005011c
obo:ECO_0007774c
obo:ECO_0007703c

cell proliferation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005007
Super-classes obo:ECO_0001565c
Restrictions obo:IAO_0000136op some obo:GO_0008283c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2015c)
obo:OBI_0000312op some obo:OBI_0000891c
Sub-classes obo:ECO_0001001c
obo:ECO_0007775c
obo:ECO_0005008c
obo:ECO_0001136c
obo:ECO_0000336c
obo:ECO_0006020c
obo:ECO_0007696c
obo:ECO_0005604c

DNA synthesis cell proliferation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005008
Super-classes obo:ECO_0005007c
Restrictions obo:IAO_0000136op some obo:GO_0090592c
Sub-classes obo:ECO_0007697c
obo:ECO_0001107c
obo:ECO_0007776c
obo:ECO_0001003c

ATP bioluminescence assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005011
Super-classes obo:ECO_0005004c
Restrictions obo:OBI_0000312op some obo:OBI_0002175c
Sub-classes obo:ECO_0007159c
obo:ECO_0007263c

cytotoxicity assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005012
Super-classes obo:ECO_0001565c
Restrictions obo:OBI_0000312op some obo:OBI_0001977c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2025c)
obo:IAO_0000136op some obo:GO_0009636c
Sub-classes obo:ECO_0007702c
obo:ECO_0007781c
obo:ECO_0001004c

in vitro cell based assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005014
Description

Use children of ECO:0001565 (cell-based assay evidence) in place of this term.

staining evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005019
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some (obo:OBI_0000185c and n6d93943533d34a84b8c3678390dd5edfb2031c)
Sub-classes obo:ECO_0007798c
obo:ECO_0007069c
obo:ECO_0001037c
obo:ECO_0007037c
obo:ECO_0001005c
obo:ECO_0007716c
obo:ECO_0001022c
obo:ECO_0001114c

chemotaxis assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005021
Super-classes obo:ECO_0001565c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2043c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2038c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2043c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2038c)
obo:IAO_0000136op some obo:GO_0006935c
obo:OBI_0000312op some obo:OBI_0000978c
Sub-classes obo:ECO_0005609c
obo:ECO_0007701c
obo:ECO_0001017c
obo:ECO_0005608c
obo:ECO_0005607c
obo:ECO_0007780c

genetic transformation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005027
Super-classes obo:ECO_0000015c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2054c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2049c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2054c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2049c)
Sub-classes obo:ECO_0000120c
obo:ECO_0007427c
obo:ECO_0006049c
obo:ECO_0001090c
obo:ECO_0001091c
obo:ECO_0001131c

structure determination evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005031
Super-classes obo:ECO_0000006c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2060c)
Sub-classes obo:ECO_0007061c
obo:ECO_0006177c
obo:ECO_0007735c
obo:ECO_0006183c
obo:ECO_0007815c
obo:ECO_0006194c
obo:ECO_0005033c
obo:ECO_0006265c
obo:ECO_0001034c
obo:ECO_0006259c

electron microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005033
Super-classes obo:ECO_0005031c
obo:ECO_0001098c
Restrictions obo:OBI_0000312op some obo:OBI_0001631c
Sub-classes obo:ECO_0005596c
obo:ECO_0007493c
obo:ECO_0006003c
obo:ECO_0005591c
obo:ECO_0006181c
obo:ECO_0007045c
obo:ECO_0006070c
obo:ECO_0007043c
obo:ECO_0006250c

apoptotic assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005034
Super-classes obo:ECO_0001565c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2076c)
obo:IAO_0000136op some obo:GO_0006915c
obo:OBI_0000312op some obo:OBI_0001977c
Sub-classes obo:ECO_0001100c
obo:ECO_0001036c
obo:ECO_0001011c
obo:ECO_0001133c
obo:ECO_0001019c
obo:ECO_0001101c
obo:ECO_0007698c
obo:ECO_0001039c
obo:ECO_0001104c
obo:ECO_0007777c

in vivo polyADP-ribosylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005500
Super-classes obo:ECO_0001557c
Sub-classes obo:ECO_0007476c
obo:ECO_0005501c

in vivo polyADP-ribosylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005501
Super-classes obo:ECO_0000314c
obo:ECO_0005500c

ex vivo assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005502
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some obo:OBI_0000964c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2087c)
Sub-classes obo:ECO_0007690c
obo:ECO_0007793c
obo:ECO_0001007c

two-dimensional polyacrylamide gel electrophoresis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005503
Description

Two-dimensional polyacrylamide gel electrophoresis is commonly employed to establish a proteome for an organism and demonstrate expression changes.

Super-classes obo:ECO_0000337c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2093c)
Sub-classes obo:ECO_0007498c
obo:ECO_0005614c

spectrometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005504
Super-classes obo:ECO_0000006c
Sub-classes obo:ECO_0007821c
obo:ECO_0001096c
obo:ECO_0006177c
obo:ECO_0001126c
obo:ECO_0007731c

regular expression motif search evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005505
Description

Regular expression is a computational tool used for determining whether a given genome contains a DNA region resembling a transcription factor binding motif. For example A/T=W indicates A or T may be present in a column of the alignment. (PMID: 20708667).

Super-classes obo:ECO_0000028c
Sub-classes obo:ECO_0005663c
obo:ECO_0005662c

missense mutation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005506
Super-classes obo:ECO_0001113c
Sub-classes obo:ECO_0007264c
obo:ECO_0007160c

nonsense mutation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005507
Super-classes obo:ECO_0001113c
Sub-classes obo:ECO_0007265c
obo:ECO_0007161c

silent mutation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005508
Super-classes obo:ECO_0001113c
Sub-classes obo:ECO_0007266c
obo:ECO_0007162c

insertion mutation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005509
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007163c
obo:ECO_0007267c

duplication mutation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005511
Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0007164c
obo:ECO_0007268c

frameshift mutation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005512
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007269c
obo:ECO_0007165c

repeat expansion mutation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005513
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007270c
obo:ECO_0007166c

splice site mutation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005514
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007167c
obo:ECO_0007271c

translocation mutation phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005515
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007272c
obo:ECO_0007168c

molecule detection assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005516
Super-classes obo:ECO_0000006c
Restrictions obo:OBI_0000312op some obo:OBI_0600017c
Sub-classes obo:ECO_0005518c
obo:ECO_0007816c
obo:ECO_0006247c
obo:ECO_0005519c
obo:ECO_0001522c
obo:ECO_0007736c
obo:ECO_0005517c
obo:ECO_0005520c

protein detection assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005517
Super-classes obo:ECO_0005516c
Sub-classes obo:ECO_0001053c
obo:ECO_0001116c
obo:ECO_0007819c
obo:ECO_0000007c
obo:ECO_0007738c
obo:ECO_0001121c
obo:ECO_0001044c
obo:ECO_0005526c
obo:ECO_0000267c
obo:ECO_0001023c
obo:ECO_0001102c
obo:ECO_0001055c
obo:ECO_0001117c

RNA detection assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005518
Super-classes obo:ECO_0005516c
Restrictions obo:OBI_0000312op some (obo:OBI_0000424c and obo:OBI_0600025c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2104c)
obo:IAO_0000136op some obo:GO_0010467c
obo:OBI_0000312op some (obo:OBI_0000424c and obo:OBI_0600025c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2104c)
Sub-classes obo:ECO_0007818c
obo:ECO_0001040c
obo:ECO_0001106c
obo:ECO_0007739c
obo:ECO_0000109c

DNA detection assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005519
Super-classes obo:ECO_0005516c
Restrictions obo:OBI_0000312op some (obo:OBI_0600025c and n6d93943533d34a84b8c3678390dd5edfb2114c)
Sub-classes obo:ECO_0000089c
obo:ECO_0000231c
obo:ECO_0000093c
obo:ECO_0007737c
obo:ECO_0000078c
obo:ECO_0005522c
obo:ECO_0007817c
obo:ECO_0001124c

interferometric reflectance imaging sensor evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005520
Description

Differences in the optical path lengths between a surface layer and a buried silica layer can be measured very precisely allowing optical height information to be converted to accumulated mass on the surface. For the purpose of TF-binding site identification, IRIS is coupled with DNA-arrays with immobilized potential binding regions exposed to the protein of interest and eluted. Protein-bound fragments exhibit changes in reflectance that can be used to gauge binding quantitatively.

Super-classes obo:ECO_0005516c
Sub-classes obo:ECO_0005646c
obo:ECO_0005645c

S1 nuclease protection assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005521
Super-classes obo:ECO_0001106c
Restrictions obo:OBI_0000312op some (obo:OBI_0001670c and n6d93943533d34a84b8c3678390dd5edfb2123c)
Sub-classes obo:ECO_0005666c
obo:ECO_0007523c

DNA dot blot assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005522
Super-classes obo:ECO_0005519c
Restrictions obo:OBI_0000312op some (obo:OBI_0002171c and n6d93943533d34a84b8c3678390dd5edfb2139c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2133c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2128c)
obo:OBI_0000312op some (obo:OBI_0002171c and n6d93943533d34a84b8c3678390dd5edfb2139c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2133c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2128c)
obo:OBI_0000312op some (obo:OBI_0002171c and n6d93943533d34a84b8c3678390dd5edfb2139c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2133c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2128c)
Sub-classes obo:ECO_0005523c
obo:ECO_0007477c

DNA dot blot assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005523
Super-classes obo:ECO_0000269c
obo:ECO_0005522c

matrix-assisted laser desorption/ionization time-of-flight mass spectrometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005526
Description

MALDI-TOF MS is commonly used for protein identification in constructing a proteome where protein fingerprints obtained by microbial cells are compared with a database of reference spectra by means of various algorithms integrated in systems recently made commercially available.

Super-classes obo:ECO_0005517c
Sub-classes obo:ECO_0005651c
obo:ECO_0005527c

matrix-assisted laser desorption/ionization time-of-flight mass spectrometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005527
Super-classes obo:ECO_0000269c
obo:ECO_0005526c

site-directed mutagenesis phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005528
Description

Site-directed mutagenesis is often performed in tandem with EMSA. It is often implemented only in conserved motif positions or serially through all positions of a site.

Super-classes obo:ECO_0000015c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2157c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2152c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2157c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2152c)
Sub-classes obo:ECO_0007524c
obo:ECO_0005667c

random mutagenesis phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005529
Description

Random mutagenesis is not often used in TF-binding site determination; however, it is sometimes used to investigate the effect of mutations in TF binding domains in conjunction with expression assays. Random mutations can also be introduced via chemicals, error-prone PCR (EP-PCR), degenerate oligonucleotides-Pfu(DOP), UV irradiation, mutator strains, nucleotide analogs, or DNA recombination.

Super-classes obo:ECO_0000015c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2168c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2163c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2168c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2163c)
Sub-classes obo:ECO_0001842c
obo:ECO_0005530c
obo:ECO_0007478c

random mutagenesis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005530
Super-classes obo:ECO_0000315c
obo:ECO_0005529c
Sub-classes obo:ECO_0001844c

motif discovery evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005531
Description

Relationship type between sequences (e.g. orthologs from multiple genomes or co-expressed genes in the same genome) is not necessarily assumed. The local multiple sequence alignment is typically ungapped. A common application of motif discovery is to infer the binding motif of a given transcription factor (TF). This can be based on the results of a whole-genome expression analysis, assuming that co-expressed genes are co-regulated by the same TF, from peaks in ChIP-seq experiments with the TF, or from the comparative genomics analysis of the promoter regions of orthologs.

Super-classes obo:ECO_0005555c
Sub-classes obo:ECO_0005558c
obo:ECO_0005533c
obo:ECO_0005559c

consensus search evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005532
Description

This technique is used to identify transcription factor binding sites by searching a bacterial genome for DNA regions resembling a given TF-binding motif. PMID: 17085555.

Super-classes obo:ECO_0000028c
Sub-classes obo:ECO_0005624c
obo:ECO_0005625c

phylogenetic footprinting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005533
Description

The name derives to experimental footprinting techniques where transcription factor (TF)-binding sites are identified by sequencing the region of DNA protected from biochemical agents by the bound TF. This technique is used to identify or verify transcription factor-binding motifs, most commonly in the Eukaryota (PMID: 11997340).

Super-classes obo:ECO_0005531c
Sub-classes obo:ECO_0005655c
obo:ECO_0005654c

comparative genomics motif search evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005534
Description

This technique is used to predict transcription factor binding sites in gene promoter regions by identifying conserved DNA regions across multiple genomes. PMID: 22305460. Orthology is a typical comparative criterion used.

Super-classes obo:ECO_0000028c
Sub-classes obo:ECO_0005622c
obo:ECO_0005623c

machine learning prediction of motif instance evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005535
Description

Machine learning algorithms include, but are not limited to artificial neural networks, random-forest, k-means clustering, hidden Markov models. This suite of methods can be used to identify or verify transcription factor-binding sites in genomic sequences (PMID: 15703297).

Super-classes obo:ECO_0000202c
Sub-classes obo:ECO_0005649c
obo:ECO_0005650c

position-specific scoring matrix motif search evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005536
Description

This technique is used to predict transcription factor binding sites in gene promoter regions by using a position weight matrix approach. (PMID: 15604457).

Super-classes obo:ECO_0000028c
Sub-classes obo:ECO_0005659c
obo:ECO_0005658c

xylE reporter gene assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005537
Super-classes obo:ECO_0000049c
Sub-classes obo:ECO_0007527c
obo:ECO_0005672c

computationally derived logical inferencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005538

computationally derived logical inference used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005539

computationally derived logical inference from automatic assertion used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005540

computationally derived logical inference from manual assertion used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005541

biological system reconstruction evidence by experimental evidence from single species used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005542
Description

Processes, pathways and complexes shown by a single experiment should not be annotated with this term but with ECO:0000353 or a child thereof.

Super-classes obo:ECO_0005553c
obo:ECO_0000352c

biological system reconstruction evidence by experimental evidence from mixed species used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005543
Description

Inference is made primarily on functional conservation between the two systems. The sequences and number of genome-encoded components are fairly conserved but some divergence is observed. The evidence may originate from a combination of several experiments.

Super-classes obo:ECO_0000352c
obo:ECO_0005552c

biological system reconstruction evidence based on orthology evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005544
Description

Inference is made primarily on functional conservation between the two systems. The sequences and number of genome-encoded components are fairly conserved but some divergence is observed. Evidence may originate from a combination of several experiments.

Super-classes obo:ECO_0005545c
obo:ECO_0005610c

biological system reconstruction evidence based on orthology evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005545
Description

Inference is made primarily on functional conservation between the two systems. The sequences and number of genome-encoded components are fairly conserved but some divergence is observed. Evidence may originate from a combination of several experiments.

Super-classes obo:ECO_0005549c
Sub-classes obo:ECO_0005544c
obo:ECO_0007481c

biological system reconstruction evidence based on paralogy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005546
Description

Inference is made primarily on functional conservation between the two systems. The sequences and number of genome-encoded components are fairly conserved but some divergence is observed. Evidence may originate from a combination of several experiments.

Super-classes obo:ECO_0005610c
obo:ECO_0005550c

biological system reconstruction evidence based on inference from background scientific knowledge used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005547
Description

Functional studies or ligand binding evidence are often used for the reconstruction of biological systems. It does not provide physical interaction evidence but uses proxies such a ligand binding evidences to infer the presence or absence of the complex components.

Super-classes obo:ECO_0005548c
obo:ECO_0000352c

biological system reconstruction evidence based on inference from background scientific knowledgec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005548
Description

The available knowledge is usually a combination of partial or weak experimental evidence where either some components are missing or no physical interaction evidence can be found but the system is inferred by similarity to related systems in taxonomically-disparate organisms with experimental evidence. Functional studies or ligand binding evidence are often used for the reconstruction of biological systems. It does not provide physical interaction evidence but uses proxies such a ligand binding evidences to infer the presence or absence of the complex components.

Super-classes obo:ECO_0000088c
Sub-classes obo:ECO_0005547c
obo:ECO_0007484c

biological system reconstruction evidence based on homology evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005549
Description

Inference may be based on paralogy and/or orthology of the genome-encoded components and is made primarily on functional conservation between the two systems. The sequences and number of genome-encoded components are fairly conserved but some divergence is observed. Evidence may originate from a combination of several experiments in the same or another species.

Super-classes obo:ECO_0000088c
Sub-classes obo:ECO_0007482c
obo:ECO_0005610c
obo:ECO_0005550c
obo:ECO_0005545c

biological system reconstruction evidence based on paralogy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005550
Description

Inference is made primarily on functional conservation between the two systems. The sequences and number of genome-encoded components are fairly conserved but some divergence is observed. Evidence may originate from a combination of several experiments.

Super-classes obo:ECO_0005549c
Sub-classes obo:ECO_0005546c
obo:ECO_0007483c

biological system reconstruction evidence by experimental evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005551
Super-classes obo:ECO_0000088c
Sub-classes obo:ECO_0005552c
obo:ECO_0007747c
obo:ECO_0007828c
obo:ECO_0005553c

biological system reconstruction evidence by experimental evidence from mixed speciesc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005552
Description

Inference is made primarily on functional conservation between the two systems. The sequences and number of genome-encoded components are fairly conserved but some divergence is observed. The evidence may originate from a combination of several experiments.

Super-classes obo:ECO_0005551c
Sub-classes obo:ECO_0007480c
obo:ECO_0005543c

biological system reconstruction evidence by experimental evidence from single speciesc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005553
Description

Processes, pathways and complexes shown by a single experiment should not be annotated with this term but with ECO:0000353 or a child thereof.

Super-classes obo:ECO_0005551c
Sub-classes obo:ECO_0005542c
obo:ECO_0007479c

pairwise sequence alignment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005554
Super-classes obo:ECO_0000200c
Sub-classes obo:ECO_0005561c
obo:ECO_0005560c
obo:ECO_0000206c

multiple sequence alignment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005555
Super-classes obo:ECO_0000200c
Sub-classes obo:ECO_0005556c
obo:ECO_0005531c
obo:ECO_0005557c

multiple sequence alignment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005556
Super-classes obo:ECO_0005555c
obo:ECO_0000247c
Sub-classes obo:ECO_0005558c

multiple sequence alignment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005557
Super-classes obo:ECO_0000248c
obo:ECO_0005555c
Sub-classes obo:ECO_0005559c

motif discovery evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005558
Super-classes obo:ECO_0005531c
obo:ECO_0005556c
Sub-classes obo:ECO_0005654c

motif discovery evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005559
Super-classes obo:ECO_0005557c
obo:ECO_0005531c
Sub-classes obo:ECO_0005655c

pairwise sequence alignment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005560
Super-classes obo:ECO_0005554c
obo:ECO_0000247c
Sub-classes obo:ECO_0000030c

pairwise sequence alignment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005561
Super-classes obo:ECO_0005554c
obo:ECO_0000248c
Sub-classes obo:ECO_0000209c

in-gel protein kinase assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005562
Super-classes obo:ECO_0001558c
Sub-classes obo:ECO_0007169c
obo:ECO_0007273c

macroscopic current trace evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005563
Super-classes obo:ECO_0005576c
Restrictions obo:IAO_0000136op some obo:GO_0005216c
obo:OBI_0000312op some obo:OBI_0000447c
Sub-classes obo:ECO_0007170c
obo:ECO_0007274c

current density evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005564
Super-classes obo:ECO_0000164c
Restrictions obo:IAO_0000136op some obo:GO_0005216c
obo:OBI_0000312op some obo:OBI_0000447c
Sub-classes obo:ECO_0007275c
obo:ECO_0007171c

single channel conductance evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005565

sustained current evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005566
Super-classes obo:ECO_0000164c
Restrictions obo:OBI_0000312op some obo:OBI_0000447c
obo:IAO_0000136op some obo:GO_0005216c
Sub-classes obo:ECO_0007172c
obo:ECO_0007276c

steady state activation curve evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005567

steady state inactivation curve evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005568

window current trace evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005569

use dependence of inactivation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005570
Super-classes obo:ECO_0000164c
Sub-classes obo:ECO_0007173c
obo:ECO_0007277c

current clamp recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005571
Super-classes obo:ECO_0000164c
Sub-classes obo:ECO_0007174c
obo:ECO_0007278c

whole-cell voltage clamp recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005572
Super-classes obo:ECO_0005576c
Restrictions obo:IAO_0000136op some obo:GO_0005216c
obo:OBI_0000312op some (obo:OBI_0000447c and n6d93943533d34a84b8c3678390dd5edfb2229c)
Sub-classes obo:ECO_0007279c
obo:ECO_0007175c

cell-attached single-channel recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005573
Super-classes obo:ECO_0006012c
Restrictions obo:OBI_0000312op some obo:OBI_0002179c
Sub-classes obo:ECO_0007280c
obo:ECO_0007176c

cell-detached inside-out single-channel recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005574
Super-classes obo:ECO_0006012c
Restrictions obo:OBI_0000312op some obo:OBI_0002180c
Sub-classes obo:ECO_0007177c
obo:ECO_0007281c

reconstituted bilayer single-channel patch recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005575
Super-classes obo:ECO_0006012c
Sub-classes obo:ECO_0007282c
obo:ECO_0007178c

voltage clamp recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005576
Super-classes obo:ECO_0000164c
Sub-classes obo:ECO_0007766c
obo:ECO_0005563c
obo:ECO_0000166c
obo:ECO_0007686c
obo:ECO_0005583c
obo:ECO_0005584c
obo:ECO_0005572c

electroencephalography recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005577
Super-classes obo:ECO_0000164c
Restrictions obo:OBI_0000312op some obo:OBI_0002186c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2238c)
obo:IAO_0000136op some obo:GO_0005216c
Sub-classes obo:ECO_0007179c
obo:ECO_0007283c

super-resolution microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005578
Super-classes obo:ECO_0001098c
Restrictions obo:OBI_0000312op some obo:CHMO_0000102c
Sub-classes obo:ECO_0007533c
obo:ECO_0006072c
obo:ECO_0006004c

immunogold labelling evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005579
Super-classes obo:ECO_0006031c
obo:ECO_0000090c
Sub-classes obo:ECO_0005592c

flow cytometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005580
Super-classes obo:ECO_0000314c
obo:ECO_0000268c

enzyme-linked immunoabsorbent assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005581
Super-classes obo:ECO_0000267c
obo:ECO_0000269c

cell-detached outside-out single-channel recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005582
Super-classes obo:ECO_0006012c
Restrictions obo:OBI_0000312op some obo:OBI_0002181c
Sub-classes obo:ECO_0007180c
obo:ECO_0007284c

cut-open oocyte voltage clamp recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005583
Super-classes obo:ECO_0005576c
Sub-classes obo:ECO_0007285c
obo:ECO_0007181c

macropatch voltage clamp recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005584
Super-classes obo:ECO_0005576c
Restrictions obo:OBI_0000312op some (obo:OBI_0000447c and n6d93943533d34a84b8c3678390dd5edfb2262c)
obo:IAO_0000136op some obo:GO_0005216c
Sub-classes obo:ECO_0007286c
obo:ECO_0007182c

high throughput mass spectrometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005585
Description

There are significant differences in data analysis and data evaluation if to compare a HTP mass-spec and a regular mass-spec. The regular mass spec method is quite a reliable technique for identifying a protein molecular weight and analysing its post-modifications, other mass-spec applications might require the additional quality controls and more stringent data evaluation. More complex sample mixture is processed, more quality questions should be addressed, such as a sample contamination and sensitivity of the mass spectrometer while using HTP mass-spec. For HTP mass-spec, the analysis of the small data sets allows to manually assign the spectra to proteins or peptides, but for large data sets only the statistical tools can be used instead.

Super-classes obo:ECO_0001096c
Sub-classes obo:ECO_0005586c
obo:ECO_0007489c

high throughput mass spectrometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005586
Super-classes obo:ECO_0001230c
obo:ECO_0005585c

confocal microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005587
Super-classes obo:ECO_0001098c
Restrictions obo:OBI_0000312op some (obo:OBI_0000185c and n6d93943533d34a84b8c3678390dd5edfb2271c)
Sub-classes obo:ECO_0007490c
obo:ECO_0005589c
obo:ECO_0007059c
obo:ECO_0005600c
obo:ECO_0007057c

wide-field microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005588
Super-classes obo:ECO_0001098c
Sub-classes obo:ECO_0005598c
obo:ECO_0005590c
obo:ECO_0007491c

confocal microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005589
Super-classes obo:ECO_0005587c
obo:ECO_0001232c
Sub-classes obo:ECO_0007058c
obo:ECO_0007060c
obo:ECO_0005601c

wide-field microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005590
Super-classes obo:ECO_0005588c
obo:ECO_0001232c
Sub-classes obo:ECO_0006062c

immunogold labelling electron microscopy assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005591
Super-classes obo:ECO_0000090c
obo:ECO_0005033c
Restrictions obo:OBI_0000312op some (obo:OBI_0001631c and n6d93943533d34a84b8c3678390dd5edfb2284c)
Sub-classes obo:ECO_0007492c
obo:ECO_0005592c

immunogold labelling electron microscopy assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005592
Super-classes obo:ECO_0006003c
obo:ECO_0005579c
obo:ECO_0005591c

immunodetection assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005593
Super-classes obo:ECO_0000002c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2299c)
obo:OBI_0000312op some obo:OBI_0600025c
obo:IAO_0000136op some obo:GO_0003823c
Sub-classes obo:ECO_0007719c
obo:ECO_0007796c
obo:ECO_0000087c
obo:ECO_0000112c
obo:ECO_0006194c

immunoperoxidase immunolocalization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005594
Super-classes obo:ECO_0000087c
Sub-classes obo:ECO_0007494c
obo:ECO_0005596c
obo:ECO_0005595c

immunoperoxidase immunolocalization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005595
Super-classes obo:ECO_0005594c
obo:ECO_0006031c
Sub-classes obo:ECO_0005597c

immunoperoxidase immunolocalization electron microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005596
Super-classes obo:ECO_0005033c
obo:ECO_0005594c
Restrictions obo:OBI_0000312op some (obo:OBI_0001631c and obo:OBI_0001632c)
Sub-classes obo:ECO_0005597c
obo:ECO_0007495c

immunoperoxidase immunolocalization electron microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005597
Super-classes obo:ECO_0006003c
obo:ECO_0005595c
obo:ECO_0005596c

wide-field fluorescence microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005598
Description

The optical filter is used to select the wavelength of excitation light. The detection camera is typically a CCD camera. Both topographical and dynamic information of a sample are obtained.

Super-classes obo:ECO_0005588c
Sub-classes obo:ECO_0005599c
obo:ECO_0007561c
obo:ECO_0006062c

immunofluorescence wide-field microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005599
Super-classes obo:ECO_0005598c
obo:ECO_0000007c
Sub-classes obo:ECO_0006061c
obo:ECO_0007560c

immunofluorescence confocal microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005600
Description

This allows visualization of sub cellular distribution of biomolecules of interest.

Super-classes obo:ECO_0000007c
obo:ECO_0005587c
Restrictions obo:OBI_0000312op some (obo:OBI_0001635c and n6d93943533d34a84b8c3678390dd5edfb2320c)
Sub-classes obo:ECO_0005601c
obo:ECO_0007496c

immunofluorescence confocal microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005601
Super-classes obo:ECO_0005589c
obo:ECO_0005804c
obo:ECO_0005600c

protein mass spectrometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005603
Super-classes obo:ECO_0001096c
Sub-classes obo:ECO_0007184c
obo:ECO_0007288c

cross-streak test evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005604
Super-classes obo:ECO_0005007c
Restrictions obo:IAO_0000136op some obo:GO_0009607c
obo:OBI_0000312op some obo:OBI_0000978c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2339c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2334c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2339c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2334c)
Sub-classes obo:ECO_0007185c
obo:ECO_0007289c

disk diffusion test evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005605
Super-classes obo:ECO_0007083c
Restrictions obo:IAO_0000136op some obo:GO_0046677c
Sub-classes obo:ECO_0007700c
obo:ECO_0007779c

cell transfection experiment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005606
Super-classes obo:ECO_0000006c
Restrictions obo:IAO_0000136op some obo:GO_0050789c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2347c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2352c and obo:OBI_0000964c and n6d93943533d34a84b8c3678390dd5edfb2358c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2347c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2352c and obo:OBI_0000964c and n6d93943533d34a84b8c3678390dd5edfb2358c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2347c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2352c and obo:OBI_0000964c and n6d93943533d34a84b8c3678390dd5edfb2358c)
Sub-classes obo:ECO_0007530c
obo:ECO_0005802c

tethered cell assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005607
Super-classes obo:ECO_0005021c
Restrictions obo:IAO_0000136op some obo:GO_0060326c
Sub-classes obo:ECO_0007186c
obo:ECO_0007290c

tumble frequency assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005608
Super-classes obo:ECO_0005021c
Restrictions obo:IAO_0000136op some obo:GO_0060326c
Sub-classes obo:ECO_0007291c
obo:ECO_0007187c

capillary assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005609
Description

To determine the presence of positive chemotaxis, an attractant is placed in the capillary and the presence of positive chemotaxis is determined based on the amount of organism that accumulated in the capillary.

Super-classes obo:ECO_0005021c
Restrictions obo:IAO_0000136op some obo:GO_0060326c
Sub-classes obo:ECO_0007292c
obo:ECO_0007188c

biological system reconstruction evidence based on homology evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005610
Description

Inference may be based on paralogy and/or orthology of the genome-encoded components and is made primarily on functional conservation between the two systems. The sequences and number of genome-encoded components are fairly conserved but some divergence is observed. Evidence may originate from a combination of several experiments in the same or another species.

Super-classes obo:ECO_0000352c
obo:ECO_0005549c
Sub-classes obo:ECO_0005544c
obo:ECO_0005546c

inference from experimental data evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005611

inference from phenotype manipulation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005612
Description

Changes can include any gene mutation/knockout, over-expression or ectopic expression of wild-type or mutant genes, anti-sense experiments, RNAi experiments, specific protein inhibitors.

inference by association of genotype from phenotypec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005613
Description

Used for 1) polymorphism or segregation of genetic markers (SNPs, mutations, RFLPs, microsatellites); 2) polymorphism or segregation of physical markers (FISH, centromeric or heterochromatic regions, chromosomal banding patterns); 3) detection of polymorphisms in inbred stock.

Super-classes obo:ECO_0001237c
Sub-classes obo:ECO_0007295c

two-dimensional polyacrylamide gel electrophoresis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005614
Super-classes obo:ECO_0000314c
obo:ECO_0005503c

alkaline phosphatase reporter gene assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005615
Super-classes obo:ECO_0001801c
obo:ECO_0000270c

beta-galactosidase reporter gene assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005616
Super-classes obo:ECO_0000270c
obo:ECO_0001802c

chloramphenicol acetyltransferase reporter gene assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005617
Super-classes obo:ECO_0001803c
obo:ECO_0000270c

chromatin immunoprecipitation-chip evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005618
Super-classes obo:ECO_0007786c
obo:ECO_0000230c

chromatin immunoprecipitation- exonuclease evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005619
Super-classes obo:ECO_0001806c
obo:ECO_0007786c

chromatin immunoprecipitation-PCR evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005620
Super-classes obo:ECO_0005644c
obo:ECO_0000227c

chromatin immunoprecipitation-seq evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005621
Super-classes obo:ECO_0007786c
obo:ECO_0000229c

comparative genomics motif search evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005622
Super-classes obo:ECO_0005534c
obo:ECO_0000257c

comparative genomics motif search evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005623
Super-classes obo:ECO_0000258c
obo:ECO_0005534c

consensus search evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005624
Super-classes obo:ECO_0005532c
obo:ECO_0000257c

consensus search evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005625
Super-classes obo:ECO_0005532c
obo:ECO_0000258c

copper-phenanthroline footprinting evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005626
Super-classes obo:ECO_0006083c
obo:ECO_0001815c

DNA adenine methyltransferase identification evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005627
Super-classes obo:ECO_0001824c
obo:ECO_0006075c

DNA adenine methyltransferase identification evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005628
Super-classes obo:ECO_0001824c
obo:ECO_0007384c

DNA affinity chromatography evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005629
Super-classes obo:ECO_0007680c
obo:ECO_0001809c

cDNA to DNA expression microarray evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005630
Super-classes obo:ECO_0000097c
obo:ECO_0007301c
Sub-classes obo:ECO_0007304c

DNAse footprinting evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005631
Super-classes obo:ECO_0006083c
obo:ECO_0001810c

fluorescence anisotropy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005632
Super-classes obo:ECO_0001811c
obo:ECO_0001249c

ferric uptake regulator titration assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005633
Super-classes obo:ECO_0001829c
obo:ECO_0000270c

genomic systematic evolution of ligands by exponential amplification evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005634
Super-classes obo:ECO_0006088c
obo:ECO_0001812c

genomic systematic evolution of ligands by exponential amplification evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005635
Super-classes obo:ECO_0007510c
obo:ECO_0001812c

green fluorescent protein reporter gene assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005636
Super-classes obo:ECO_0001816c
obo:ECO_0000270c

green fluorescent protein reporter gene assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005637
Super-classes obo:ECO_0001816c
obo:ECO_0007765c

cell growth regulation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005638
Super-classes obo:ECO_0000314c
obo:ECO_0000095c

cell growth regulation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005639
Super-classes obo:ECO_0007778c
obo:ECO_0000095c

glutathione S-transferase pull-down assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005640
Super-classes obo:ECO_0006077c
obo:ECO_0001817c

beta-glucuronidase reporter gene assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005641
Super-classes obo:ECO_0001804c
obo:ECO_0000270c

heteronuclear single quantum coherence spectroscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005642
Super-classes obo:ECO_0006165c
obo:ECO_0001813c

hydroxyl-radical footprinting evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005643
Super-classes obo:ECO_0006083c
obo:ECO_0001818c

immunoprecipitation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005644
Super-classes obo:ECO_0000085c
obo:ECO_0006076c
Sub-classes obo:ECO_0005620c
obo:ECO_0007129c
obo:ECO_0006007c
obo:ECO_0006008c
obo:ECO_0006030c
obo:ECO_0006009c
obo:ECO_0007706c

interferometric reflectance imaging sensor evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005645
Super-classes obo:ECO_0005520c
obo:ECO_0000269c

interferometric reflectance imaging sensor evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005646
Super-classes obo:ECO_0007816c
obo:ECO_0005520c

isothermal titration calorimetry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005647
Super-classes obo:ECO_0001825c
obo:ECO_0006075c

luciferase reporter gene assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005648
Super-classes obo:ECO_0001805c
obo:ECO_0000270c

machine learning prediction of motif instance evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005649
Super-classes obo:ECO_0000255c
obo:ECO_0005535c

machine learning prediction of motif instance evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005650
Super-classes obo:ECO_0000256c
obo:ECO_0005535c

matrix-assisted laser desorption/ionization time-of-flight mass spectrometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005651
Super-classes obo:ECO_0005526c
obo:ECO_0007819c

methidiumpropyl-ethylenediaminetetraacetic acid iron (II) footprinting evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005652
Super-classes obo:ECO_0006083c
obo:ECO_0001814c

northern assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005653
Super-classes obo:ECO_0000291c
obo:ECO_0000106c

phylogenetic footprinting evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005654
Super-classes obo:ECO_0005533c
obo:ECO_0005558c

phylogenetic footprinting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005655
Super-classes obo:ECO_0005559c
obo:ECO_0005533c

methylation interference footprinting evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005656
Super-classes obo:ECO_0006083c
obo:ECO_0001827c

primer extension assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005657
Super-classes obo:ECO_0000291c
obo:ECO_0001819c

position-specific scoring matrix motif search evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005658
Super-classes obo:ECO_0000257c
obo:ECO_0005536c

position-specific scoring matrix motif search evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005659
Super-classes obo:ECO_0005536c
obo:ECO_0000258c

quantitative polymerase chain reaction evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005660
Super-classes obo:ECO_0000269c
obo:ECO_0000231c

rapid amplification of cDNA ends polymerase chain reaction evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005661
Super-classes obo:ECO_0000269c
obo:ECO_0001820c

regular expression motif search evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005662
Super-classes obo:ECO_0000257c
obo:ECO_0005505c

regular expression motif search evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005663
Super-classes obo:ECO_0005505c
obo:ECO_0000258c

RNA sequencing assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005664
Description

Use ECO:0006068 (RNA-seq evidence used in manual assertion) in place of this term.

RNA sequencing assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005665
Description

Use ECO:0006069 (RNA-seq evidence used in automatic assertion) in place of this term.

S1 nuclease protection assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005666
Super-classes obo:ECO_0001240c
obo:ECO_0005521c

site-directed mutagenesis phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005667
Super-classes obo:ECO_0005528c
obo:ECO_0000315c

survival rate analysis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005668
Super-classes obo:ECO_0001822c
obo:ECO_0001225c

ultraviolet light footprinting evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005669
Super-classes obo:ECO_0006083c
obo:ECO_0001826c

x-ray crystallography evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005670
Super-classes obo:ECO_0001171c
obo:ECO_0001823c
Sub-classes obo:ECO_0006220c
obo:ECO_0006222c

x-ray crystallography evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005671
Super-classes obo:ECO_0001823c
obo:ECO_0007374c
Sub-classes obo:ECO_0006223c
obo:ECO_0006221c

xylE reporter gene assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005672
Super-classes obo:ECO_0000270c
obo:ECO_0005537c

ad-hoc qualitative phenotype observation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005673
Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0005674c
obo:ECO_0007528c

ad-hoc qualitative phenotype observation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005674
Super-classes obo:ECO_0007634c
obo:ECO_0005673c

ad-hoc quantitative phenotype observation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005675
Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0007529c
obo:ECO_0005676c

ad-hoc quantitative phenotype observation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005676
Super-classes obo:ECO_0007634c
obo:ECO_0005675c

dilution assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005800
Description

For chemicals, bacteriocins, or phage, the indicator culture is typically present in a soft-agar layer on top of nutrient agar and a small quantity of each dilution is spotted onto the soft agar overlay.

Super-classes obo:ECO_0000002c

enzymatic activity assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005801
Super-classes obo:ECO_0000005c
obo:ECO_0000314c
Sub-classes obo:ECO_0007123c
obo:ECO_0007687c
obo:ECO_0001202c
obo:ECO_0001268c
obo:ECO_0007169c
obo:ECO_0001218c

cell transfection experiment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005802
Super-classes obo:ECO_0000269c
obo:ECO_0005606c

motility assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0005803
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0007296c
obo:ECO_0007192c

immunofluorescence evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005804
Super-classes obo:ECO_0000007c
obo:ECO_0000269c
Sub-classes obo:ECO_0005601c
obo:ECO_0006061c

yeast 2-hybrid evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0005805
Super-classes obo:ECO_0000068c
obo:ECO_0006077c

Cya fusion reporter assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006001
Super-classes obo:ECO_0000017c
obo:ECO_0000049c
Sub-classes obo:ECO_0007532c
obo:ECO_0006002c

Cya fusion reporter assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006002
Super-classes obo:ECO_0001273c
obo:ECO_0000270c
obo:ECO_0006001c

electron microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006003
Super-classes obo:ECO_0001232c
obo:ECO_0005033c
Sub-classes obo:ECO_0006281c
obo:ECO_0005592c
obo:ECO_0005597c
obo:ECO_0006208c
obo:ECO_0006071c
obo:ECO_0007046c
obo:ECO_0007044c

super-resolution microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006004
Super-classes obo:ECO_0001232c
obo:ECO_0005578c
Sub-classes obo:ECO_0006073c

fractionation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006005
Super-classes obo:ECO_0000314c
obo:ECO_0000100c
Sub-classes obo:ECO_0007113c
obo:ECO_0006042c
obo:ECO_0007104c
obo:ECO_0007684c
obo:ECO_0007112c

electrophysiology assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006006
Super-classes obo:ECO_0000164c
obo:ECO_0000314c
Sub-classes obo:ECO_0006039c
obo:ECO_0007172c
obo:ECO_0007115c
obo:ECO_0007181c
obo:ECO_0007173c
obo:ECO_0007179c
obo:ECO_0007171c
obo:ECO_0007686c
obo:ECO_0006044c
obo:ECO_0007170c
obo:ECO_0007182c
obo:ECO_0006013c
obo:ECO_0007174c
obo:ECO_0007175c

chromatin immunoprecipitation-chip evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006007
Super-classes obo:ECO_0005644c
obo:ECO_0000230c

chromatin immunoprecipitation- exonuclease evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006008
Super-classes obo:ECO_0001806c
obo:ECO_0005644c

chromatin immunoprecipitation-seq evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006009
Super-classes obo:ECO_0005644c
obo:ECO_0000229c

mRNA interactome capture evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006010
Super-classes obo:ECO_0000136c
Restrictions obo:OBI_0000312op some obo:OBI_0002436c
Sub-classes obo:ECO_0007536c
obo:ECO_0006011c

mRNA interactome capture evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006011
Super-classes obo:ECO_0006083c
obo:ECO_0006010c

patch-clamp recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006012
Super-classes obo:ECO_0000164c
Restrictions obo:IAO_0000136op some obo:GO_0005216c
obo:OBI_0000312op some obo:OBI_0002177c
Sub-classes obo:ECO_0005582c
obo:ECO_0007537c
obo:ECO_0006014c
obo:ECO_0005573c
obo:ECO_0005574c
obo:ECO_0005575c
obo:ECO_0006013c

patch-clamp recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006013
Super-classes obo:ECO_0006006c
obo:ECO_0006012c
Sub-classes obo:ECO_0007180c
obo:ECO_0007178c
obo:ECO_0006015c
obo:ECO_0007176c
obo:ECO_0007177c

whole-cell patch-clamp recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006014
Super-classes obo:ECO_0006012c
Restrictions obo:OBI_0000312op some obo:OBI_0002178c
Sub-classes obo:ECO_0006015c
obo:ECO_0007538c

whole-cell patch-clamp recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006015
Super-classes obo:ECO_0006014c
obo:ECO_0006013c

author statement from published clinical studyc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006016
Super-classes obo:ECO_0000033c
Sub-classes obo:ECO_0007539c
obo:ECO_0006017c

author statement from published clinical study used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006017
Description

Created and used by the Human Phenotype Ontology (HPO) Annotations group. Here it is used when evidence for an HPO annotation is information extracted from articles in the medical literature.

Super-classes obo:ECO_0000304c
obo:ECO_0006016c

inference based on individual clinical experiencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006018
Super-classes obo:ECO_0000205c
Sub-classes obo:ECO_0006019c
obo:ECO_0007540c

inference based on individual clinical experience used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006019
Description

Created and used by the Human Phenotype Ontology (HPO) Annotations group. Here it is used for annotating disorders with a limited amount of published data, and is accompanied by a reference to the individual or center performing the annotation.

Super-classes obo:ECO_0006018c
obo:ECO_0000305c

biofilm formation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006020
Super-classes obo:ECO_0005007c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2680c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2685c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2680c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2685c)
obo:OBI_0000312op some obo:OBI_0000978c
obo:IAO_0000136op some obo:GO_0042710c
Sub-classes obo:ECO_0006028c
obo:ECO_0006022c
obo:ECO_0006026c
obo:ECO_0007071c
obo:ECO_0006024c
obo:ECO_0006021c
obo:ECO_0007541c

biofilm formation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006021
Super-classes obo:ECO_0006020c
obo:ECO_0000314c
Sub-classes obo:ECO_0006023c
obo:ECO_0006027c
obo:ECO_0007072c
obo:ECO_0006029c
obo:ECO_0006025c

microtiter plate biofilm assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006022
Super-classes obo:ECO_0006020c
Restrictions obo:OBI_0000312op some (obo:OBI_0000978c and n6d93943533d34a84b8c3678390dd5edfb2695c)
Sub-classes obo:ECO_0006023c
obo:ECO_0007542c

microtiter plate biofilm assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006023
Super-classes obo:ECO_0006021c
obo:ECO_0006022c

air-liquid interface assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006024
Description

Tilting of the plate positions the air-liquid interface on a clear portion to improve visability.

Super-classes obo:ECO_0006020c
Sub-classes obo:ECO_0007543c
obo:ECO_0006025c

air-liquid interface assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006025
Super-classes obo:ECO_0006024c
obo:ECO_0006021c

colony biofilm assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006026
Description

The plates commonly contain different carbon sources or antibiotic treatments to observe properties of the cells.

Super-classes obo:ECO_0006020c
Sub-classes obo:ECO_0006027c
obo:ECO_0007544c

colony biofilm assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006027
Super-classes obo:ECO_0006021c
obo:ECO_0006026c

Kadouri drip-fed biofilm assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006028
Super-classes obo:ECO_0006020c
Sub-classes obo:ECO_0007545c
obo:ECO_0006029c

Kadouri drip-fed biofilm assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006029
Super-classes obo:ECO_0006028c
obo:ECO_0006021c

co-immunoprecipitation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006030
Super-classes obo:ECO_0000070c
obo:ECO_0005644c

immunolocalization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006031
Super-classes obo:ECO_0001232c
obo:ECO_0000087c
Sub-classes obo:ECO_0005579c
obo:ECO_0007142c
obo:ECO_0007103c
obo:ECO_0007143c
obo:ECO_0005595c

optogenetic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006032
Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0007547c
obo:ECO_0006033c

optogenetic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006033
Super-classes obo:ECO_0006032c
obo:ECO_0007634c

fluorescent sensor evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006034
Description

Examples include sensors for ion concentration and potential difference across a membrane.

Super-classes obo:ECO_0001115c
Sub-classes obo:ECO_0006036c
obo:ECO_0006035c
obo:ECO_0007548c
obo:ECO_0006038c

fluorescent sensor evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006035
Super-classes obo:ECO_0006034c
obo:ECO_0001249c
Sub-classes obo:ECO_0006039c
obo:ECO_0006037c

genetically encoded fluorescent sensor evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006036
Super-classes obo:ECO_0006034c
Sub-classes obo:ECO_0006037c
obo:ECO_0007549c

genetically encoded fluorescent sensor evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006037
Super-classes obo:ECO_0006036c
obo:ECO_0006035c

genetically encoded fluorescent electrophysiology assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006038
Description

Examples include genetically encoded sensors that detect potential difference across plasma membrane.

Super-classes obo:ECO_0000164c
obo:ECO_0006034c
Sub-classes obo:ECO_0006040c
obo:ECO_0006039c
obo:ECO_0007550c

genetically encoded fluorescent electrophysiology assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006039
Super-classes obo:ECO_0006006c
obo:ECO_0006035c
obo:ECO_0006038c
Sub-classes obo:ECO_0006041c

genetically encoded fluorescent ion concentration sensor assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006040
Description

Examples include the genetically encoded calcium indicator GCaMP.

Super-classes obo:ECO_0006038c
Sub-classes obo:ECO_0007551c
obo:ECO_0006041c

genetically encoded fluorescent ion concentration sensor assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006041
Super-classes obo:ECO_0006039c
obo:ECO_0006040c

cell fractionation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006042
Super-classes obo:ECO_0006005c
obo:ECO_0000004c

extracellular recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006043
Super-classes obo:ECO_0000164c
Restrictions obo:OBI_0000312op some obo:OBI_0000454c
obo:IAO_0000136op some obo:GO_0001508c
Sub-classes obo:ECO_0006044c
obo:ECO_0007553c
obo:ECO_0006047c
obo:ECO_0006045c

extracellular recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006044
Super-classes obo:ECO_0006043c
obo:ECO_0006006c
Sub-classes obo:ECO_0006046c
obo:ECO_0006048c

single-unit extracellular recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006045
Super-classes obo:ECO_0006043c
Restrictions obo:OBI_0000312op some obo:OBI_0002187c
Sub-classes obo:ECO_0006046c
obo:ECO_0007554c

single-unit extracellular recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006046
Super-classes obo:ECO_0006044c
obo:ECO_0006045c

field potential recording evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006047
Super-classes obo:ECO_0006043c
Restrictions obo:OBI_0000312op some obo:OBI_0002189c
Sub-classes obo:ECO_0007555c
obo:ECO_0006048c

field potential recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006048
Super-classes obo:ECO_0006047c
obo:ECO_0006044c

genetic transformation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006049
Super-classes obo:ECO_0005027c
obo:ECO_0000315c
Sub-classes obo:ECO_0001225c
obo:ECO_0001224c
obo:ECO_0001266c
obo:ECO_0006063c

anti-sense experiment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006050
Super-classes obo:ECO_0000315c
obo:ECO_0000018c
Sub-classes obo:ECO_0001585c

morpholino experiment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006051
Super-classes obo:ECO_0000315c
obo:ECO_0000292c

RNAi evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006052
Super-classes obo:ECO_0000019c
obo:ECO_0000315c

pharmacological assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006053
Super-classes obo:ECO_0000059c
Restrictions obo:IAO_0000136op some obo:GO_0042221c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2781c)
Sub-classes obo:ECO_0007559c
obo:ECO_0006054c

pharmacological assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006054
Super-classes obo:ECO_0007634c
obo:ECO_0006053c

high throughput evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006055
Description

Some relevant articles include: PMID: 23340846, doi:10.1038/nmeth0607-523

Super-classes obo:ECO_0000000c
Sub-classes obo:ECO_0007000c
obo:ECO_0006057c
obo:ECO_0006058c
obo:ECO_0007002c
obo:ECO_0006056c
obo:ECO_0007006c
obo:ECO_0007004c

high throughput evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006056
Super-classes obo:ECO_0000352c
obo:ECO_0006055c
Sub-classes obo:ECO_0007001c
obo:ECO_0006059c
obo:ECO_0007003c
obo:ECO_0007005c
obo:ECO_0007007c

high throughput evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006057
Super-classes obo:ECO_0006055c
obo:ECO_0000501c
Sub-classes obo:ECO_0007588c
obo:ECO_0007590c
obo:ECO_0006060c
obo:ECO_0007587c
obo:ECO_0007589c

high throughput cell biology evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006058
Description

HT methodologies may incorporate techniques from optics, chemistry, biology or image analysis (https://en.wikipedia.org/wiki/High_throughput_biology)

Super-classes obo:ECO_0006055c
Sub-classes obo:ECO_0006060c
obo:ECO_0006059c

high throughput cell biology evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006059
Super-classes obo:ECO_0006056c
obo:ECO_0006058c

high throughput cell biology evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006060
Super-classes obo:ECO_0006058c
obo:ECO_0006057c

immunofluorescence wide-field microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006061
Super-classes obo:ECO_0005599c
obo:ECO_0006062c
obo:ECO_0005804c

wide-field fluorescence microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006062
Super-classes obo:ECO_0005590c
obo:ECO_0005598c
Sub-classes obo:ECO_0006061c

over expression analysis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006063
Super-classes obo:ECO_0000120c
obo:ECO_0006049c

cell-free assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006064
Super-classes obo:ECO_0000183c
obo:ECO_0000314c

in vitro cell based assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006065
Description

Use children of ECO:0001565 (cell-based assay evidence) in place of this term.

fluorescence recovery after photobleaching evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006066
Description

FRAP is a fluorescence microscopy-based technique.

Super-classes obo:ECO_0001115c
Restrictions obo:IAO_0000136op some obo:GO_0033036c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2824c)
obo:OBI_0000312op some obo:CHMO_0000087c
Sub-classes obo:ECO_0007564c
obo:ECO_0006067c

fluorescence recovery after photobleaching evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006067
Super-classes obo:ECO_0001249c
obo:ECO_0006066c

RNA-sequencing evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006068
Super-classes obo:ECO_0000291c
obo:ECO_0000295c
Sub-classes obo:ECO_0001570c
obo:ECO_0000346c
obo:ECO_0006243c

RNA-sequencing evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006069
Super-classes obo:ECO_0000295c
obo:ECO_0007303c
Sub-classes obo:ECO_0000347c
obo:ECO_000156c
obo:ECO_0006244c

immuno-labelling electron microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006070
Super-classes obo:ECO_0005033c
Restrictions obo:OBI_0000312op some (obo:OBI_0001631c and n6d93943533d34a84b8c3678390dd5edfb2857c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2847c)
obo:IAO_0000136op some obo:GO_0033036c
obo:OBI_0000312op some (obo:OBI_0001631c and n6d93943533d34a84b8c3678390dd5edfb2857c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb2847c)
Sub-classes obo:ECO_0006071c
obo:ECO_0007565c

immuno-labelling electron microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006071
Super-classes obo:ECO_0006070c
obo:ECO_0006003c

immunofluorescence super resolution microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006072
Super-classes obo:ECO_0005578c
Sub-classes obo:ECO_0006073c
obo:ECO_0007566c

immunofluorescence super resolution microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006073
Super-classes obo:ECO_0006072c
obo:ECO_0006004c

co-purification evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006074
Super-classes obo:ECO_0000353c
obo:ECO_0000022c

affinity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006075
Super-classes obo:ECO_0000353c
obo:ECO_0000023c
Sub-classes obo:ECO_0001244c
obo:ECO_0006083c
obo:ECO_0006309c
obo:ECO_0006076c
obo:ECO_0005627c
obo:ECO_0006078c
obo:ECO_0001180c
obo:ECO_0006082c
obo:ECO_0005647c

protein binding evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006076
Super-classes obo:ECO_0006075c
obo:ECO_0000024c
Sub-classes obo:ECO_0001245c
obo:ECO_0006085c
obo:ECO_0001170c
obo:ECO_0006090c
obo:ECO_0001242c
obo:ECO_0007009c
obo:ECO_0006077c
obo:ECO_0005644c
obo:ECO_0006321c

bait-prey hybrid interaction evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006077
Super-classes obo:ECO_0006076c
obo:ECO_0000025c
Sub-classes obo:ECO_0005640c
obo:ECO_0006079c
obo:ECO_0006089c
obo:ECO_0005805c
obo:ECO_0007074c
obo:ECO_0001229c

immunological assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006078
Super-classes obo:ECO_0000040c
obo:ECO_0006075c
Sub-classes obo:ECO_0001151c
obo:ECO_0001188c
obo:ECO_0007032c
obo:ECO_0007034c
obo:ECO_0001152c
obo:ECO_0001150c
obo:ECO_0007020c

yeast one-hybrid evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006079
Super-classes obo:ECO_0006077c
obo:ECO_0000066c

split-ubiquitin functional complementation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006080
Super-classes obo:ECO_0006293c
obo:ECO_0000074c

far-Western blotting evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006081
Super-classes obo:ECO_0000353c
obo:ECO_0000076c

affinity chromatography evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006082
Super-classes obo:ECO_0000079c
obo:ECO_0006075c

nucleic acid binding evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006083
Super-classes obo:ECO_0006075c
obo:ECO_0000136c
Sub-classes obo:ECO_0006090c
obo:ECO_0005626c
obo:ECO_0005656c
obo:ECO_0006011c
obo:ECO_0005643c
obo:ECO_0005631c
obo:ECO_0006087c
obo:ECO_0006086c
obo:ECO_0006321c
obo:ECO_0006084c
obo:ECO_0005669c
obo:ECO_0005652c

ribohomopolymer binding assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006084
Super-classes obo:ECO_0000138c
obo:ECO_0006083c

protein:ion binding evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006085
Super-classes obo:ECO_0006076c
obo:ECO_0000142c

Southwestern blot evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006086
Super-classes obo:ECO_0000144c
obo:ECO_0006083c

Northwestern blot evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006087
Super-classes obo:ECO_0006083c
obo:ECO_0000146c

systematic evolution of ligands by exponential amplification evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006088
Super-classes obo:ECO_0000293c
obo:ECO_0000353c
Sub-classes obo:ECO_0005634c

bacterial one-hybrid evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006089
Super-classes obo:ECO_0006077c
obo:ECO_0000294c

protein-oligonucleotide microarray binding evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006090
Super-classes obo:ECO_0006083c
obo:ECO_0006076c
obo:ECO_0001601c

functional complementation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006091
Super-classes obo:ECO_0000012c
obo:ECO_0000316c
Sub-classes obo:ECO_0006093c
obo:ECO_0006092c
obo:ECO_0006097c

transgenic rescue experiment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006092
Super-classes obo:ECO_0006091c
obo:ECO_0000013c

transient rescue experiment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006093
Super-classes obo:ECO_0006091c
obo:ECO_0000038c

suppressor/enhancer interaction phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006094
Super-classes obo:ECO_0000052c
obo:ECO_0000316c

double mutant phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006095
Super-classes obo:ECO_0000315c
obo:ECO_0000054c

epistatic interaction phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006096
Super-classes obo:ECO_0000316c
obo:ECO_0000056c

functional complementation in heterologous system evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006097
Super-classes obo:ECO_0000064c
obo:ECO_0006091c

temperature-sensitive mutant phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006098
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0006099c
obo:ECO_0007585c

temperature-sensitive mutant phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006099
Super-classes obo:ECO_0006098c
obo:ECO_0000315c

recessive mutant phenotype evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006100
Super-classes obo:ECO_0000015c
Sub-classes obo:ECO_0007586c
obo:ECO_0006101c

recessive mutant phenotype evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006101
Super-classes obo:ECO_0000315c
obo:ECO_0006100c

quantum mechanics/molecular mechanics simulation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006135
Super-classes obo:ECO_0007672c
Sub-classes obo:ECO_0006136c
obo:ECO_0006137c

quantum mechanics/molecular mechanics simulation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006136
Super-classes obo:ECO_0006135c

quantum mechanics/molecular mechanics simulation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006137
Super-classes obo:ECO_0006135c

molecular mechanics simulation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006138
Super-classes obo:ECO_0007672c
Sub-classes obo:ECO_0006139c
obo:ECO_0006140c

molecular mechanics simulation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006139
Super-classes obo:ECO_0006138c

molecular mechanics simulation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006140
Super-classes obo:ECO_0006138c

quantum mechanics simulation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006141
Super-classes obo:ECO_0007672c
Sub-classes obo:ECO_0006143c
obo:ECO_0006144c
obo:ECO_0006142c

quantum mechanics simulation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006142
Super-classes obo:ECO_0006141c

quantum mechanics simulation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006143
Super-classes obo:ECO_0006141c

density functional theory simulation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006144
Super-classes obo:ECO_0006141c
Sub-classes obo:ECO_0006146c
obo:ECO_0006145c

density functional theory simulation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006145
Super-classes obo:ECO_0006144c

density functional theory simulation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006146
Super-classes obo:ECO_0006144c

documented statement evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006151
Super-classes obo:ECO_0000000c
Sub-classes obo:ECO_0006152c
obo:ECO_0000204c
obo:ECO_0006153c
obo:ECO_0000311c
obo:ECO_0006156c
obo:ECO_0006155c

medical practitioner statement evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006152
Super-classes obo:ECO_0006151c
Sub-classes obo:ECO_0006161c
obo:ECO_0006162c

self-reported individual's statement evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006153
Super-classes obo:ECO_0006151c
Sub-classes obo:ECO_0006157c
obo:ECO_0006158c
obo:ECO_0006154c

self-reported patient statement evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006154
Super-classes obo:ECO_0006153c
Sub-classes obo:ECO_0006159c
obo:ECO_0006160c

documented statement evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006155
Super-classes obo:ECO_0000352c
obo:ECO_0006151c
Sub-classes obo:ECO_0006157c
obo:ECO_0006161c
obo:ECO_0000302c
obo:ECO_0000312c

documented statement evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006156
Super-classes obo:ECO_0000501c
obo:ECO_0006151c
Sub-classes obo:ECO_0000313c
obo:ECO_0007319c
obo:ECO_0006162c
obo:ECO_0006158c

self-reported individual's statement evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006157
Super-classes obo:ECO_0006155c
obo:ECO_0006153c
Sub-classes obo:ECO_0006159c

self-reported individual's statement evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006158
Super-classes obo:ECO_0006156c
obo:ECO_0006153c
Sub-classes obo:ECO_0006160c

self-reported patient statement evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006159
Super-classes obo:ECO_0006154c
obo:ECO_0006157c

self-reported patient statement evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006160
Super-classes obo:ECO_0006158c
obo:ECO_0006154c

medical practitioner statement evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006161
Super-classes obo:ECO_0006155c
obo:ECO_0006152c

medical practitioner statement evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006162
Super-classes obo:ECO_0006156c
obo:ECO_0006152c

nuclear magnetic resonance spectroscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006163
Super-classes obo:ECO_0001105c
Restrictions obo:OBI_0000312op some obo:OBI_0000623c
Sub-classes obo:ECO_0001813c
obo:ECO_0006165c
obo:ECO_0006164c
obo:ECO_0006175c
obo:ECO_0006176c

nuclear magnetic resonance spectroscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006164
Super-classes obo:ECO_0006163c
obo:ECO_0007441c
Sub-classes obo:ECO_0006197c
obo:ECO_0006199c
obo:ECO_0007513c

nuclear magnetic resonance spectroscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006165
Super-classes obo:ECO_0006163c
obo:ECO_0001238c
Sub-classes obo:ECO_0006198c
obo:ECO_0006196c
obo:ECO_0005642c

nuclear magnetic resonance imaging evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006166
Super-classes obo:ECO_0001105c
Sub-classes obo:ECO_0006167c
obo:ECO_0006168c

nuclear magnetic resonance imaging evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006167
Super-classes obo:ECO_0006166c
obo:ECO_0007441c

nuclear magnetic resonance imaging evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006168
Super-classes obo:ECO_0001238c
obo:ECO_0006166c

quantitative western immunoblotting evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006169
Super-classes obo:ECO_0000112c
Sub-classes obo:ECO_0006170c
obo:ECO_0006171c

quantitative western immunoblotting evidence used in manual evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006170
Super-classes obo:ECO_0000279c
obo:ECO_0006169c

quantitative western immunoblotting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006171
Super-classes obo:ECO_0007306c
obo:ECO_0006169c

mixed support of intron positions by RNA-sequencing alignment evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006172
Description

Mixed support entails that all exon pairs represented in the transcript are supported, but require a combination of evidence from multiple samples. For example, for a transcript containing five exons, if liver RNA-seq reads support the first two introns and brain RNA-seq supports the last three introns, then neither sample meets the criteria for full support (ECO:0000343) but the combination of samples qualifies as Mixed support. Mixed support may result from differential expression, or low expression levels that benefit from combining data.

Super-classes obo:ECO_0000342c
Sub-classes obo:ECO_0006173c
obo:ECO_0006174c

mixed support of intron positions by RNA-sequencing alignment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006173
Super-classes obo:ECO_0006172c
obo:ECO_0000347c

mixed support of intron positions by RNA-sequencing alignment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006174
Super-classes obo:ECO_0006172c
obo:ECO_0000346c

nuclear magnetic resonance spectroscopy-based hydrogen-deuterium exchange evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006175
Super-classes obo:ECO_0006163c
Sub-classes obo:ECO_0006197c
obo:ECO_0006196c

proton-based nuclear magnetic resonance evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006176
Super-classes obo:ECO_0006163c
Sub-classes obo:ECO_0006199c
obo:ECO_0006198c

circular dichroism evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006177
Super-classes obo:ECO_0005031c
obo:ECO_0005504c
Sub-classes obo:ECO_0006178c
obo:ECO_0006180c
obo:ECO_0006201c
obo:ECO_0006179c
obo:ECO_0006200c

synchrotron radiation circular dichroism evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006178
Super-classes obo:ECO_0006177c
Sub-classes obo:ECO_0006203c
obo:ECO_0006202c

far-UV circular dichroism evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006179
Super-classes obo:ECO_0006177c
Sub-classes obo:ECO_0006205c
obo:ECO_0006204c

near-UV circular dichroism evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006180
Super-classes obo:ECO_0006177c
Sub-classes obo:ECO_0006207c
obo:ECO_0006206c

cryogenic electron microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006181
Super-classes obo:ECO_0005033c
Sub-classes obo:ECO_0006208c
obo:ECO_0006189c
obo:ECO_0006209c
obo:ECO_0006190c

small-angle X-ray scattering evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006182
Super-classes obo:ECO_0007061c
Sub-classes obo:ECO_0006210c
obo:ECO_0006211c

particle scattering evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006183
Super-classes obo:ECO_0005031c
Sub-classes obo:ECO_0006213c
obo:ECO_0006184c
obo:ECO_0006212c

small-angle neutron scattering evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006184
Super-classes obo:ECO_0006183c
Sub-classes obo:ECO_0006214c
obo:ECO_0006215c

author inferencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006185
Super-classes obo:ECO_0000361c
obo:ECO_0000204c
Sub-classes obo:ECO_0006216c
obo:ECO_0006217c

combinatorial experimental and author inference evidence contained in single publicationc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006186
Super-classes obo:ECO_0007011c
Sub-classes obo:ECO_0006218c
obo:ECO_0006219c

X-ray crystallography-based structural model with missing residue coordinatesc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006187
Super-classes obo:ECO_0001823c
Sub-classes obo:ECO_0006220c
obo:ECO_0006221c

X-ray crystallography-based structural model with high relative B-factor valuesc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006188
Super-classes obo:ECO_0001823c
Sub-classes obo:ECO_0006222c
obo:ECO_0006223c

cryogenic electron microscopy-based structural model with missing residue coordinatesc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006189
Super-classes obo:ECO_0006181c
Sub-classes obo:ECO_0006224c
obo:ECO_0006225c

cryogenic electron microscopy-based structural model with high relative B-factor valuesc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006190
Super-classes obo:ECO_0006181c
Sub-classes obo:ECO_0006227c
obo:ECO_0006226c

Fourier-transform infrared spectroscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006191
Super-classes obo:ECO_0001126c
Sub-classes obo:ECO_0006228c
obo:ECO_0006229c

heat capacity-based evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006192
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0006231c
obo:ECO_0006230c
obo:ECO_0006193c
obo:ECO_0006260c

differential scanning calorimetry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006193
Super-classes obo:ECO_0006192c
Sub-classes obo:ECO_0006233c
obo:ECO_0006232c

selective antibody-based structural conformation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006194
Super-classes obo:ECO_0005593c
obo:ECO_0005031c
Sub-classes obo:ECO_0006235c
obo:ECO_0006234c

protein hydrogen-deuterium exchange mass spectrometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006195
Super-classes obo:ECO_0001096c
Sub-classes obo:ECO_0006236c
obo:ECO_0006237c

nuclear magnetic resonance spectroscopy-based hydrogen-deuterium exchange evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006196
Super-classes obo:ECO_0006175c
obo:ECO_0006165c

nuclear magnetic resonance spectroscopy-based hydrogen-deuterium exchange evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006197
Super-classes obo:ECO_0006164c
obo:ECO_0006175c

proton-based nuclear magnetic resonance evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006198
Super-classes obo:ECO_0006165c
obo:ECO_0006176c

proton-based nuclear magnetic resonance evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006199
Super-classes obo:ECO_0006164c
obo:ECO_0006176c

circular dichroism evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006200
Super-classes obo:ECO_0000269c
obo:ECO_0006177c
Sub-classes obo:ECO_0006202c
obo:ECO_0006204c
obo:ECO_0006206c

circular dichroism evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006201
Super-classes obo:ECO_0006177c
obo:ECO_0007815c
obo:ECO_0007821c
Sub-classes obo:ECO_0006205c
obo:ECO_0006207c
obo:ECO_0006203c

synchrotron radiation circular dichroism evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006202
Super-classes obo:ECO_0006200c
obo:ECO_0006178c

synchrotron radiation circular dichroism evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006203
Super-classes obo:ECO_0006178c
obo:ECO_0006201c

far-UV circular dichroism evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006204
Super-classes obo:ECO_0006200c
obo:ECO_0006179c

far-UV circular dichroism evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006205
Super-classes obo:ECO_0006179c
obo:ECO_0006201c

near-UV circular dichroism evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006206
Super-classes obo:ECO_0006200c
obo:ECO_0006180c

near-UV circular dichroism evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006207
Super-classes obo:ECO_0006180c
obo:ECO_0006201c

cryogenic electron microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006208
Super-classes obo:ECO_0006181c
obo:ECO_0006003c
Sub-classes obo:ECO_0006224c
obo:ECO_0006226c

cryogenic electron microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006209
Super-classes obo:ECO_0006181c
obo:ECO_0007493c
Sub-classes obo:ECO_0006225c
obo:ECO_0006227c

small-angle X-ray scattering evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006210
Super-classes obo:ECO_0006182c
obo:ECO_0007062c

small-angle X-ray scattering evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006211
Super-classes obo:ECO_0006182c
obo:ECO_0007617c

particle scattering evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006212
Super-classes obo:ECO_0000269c
obo:ECO_0006183c
Sub-classes obo:ECO_0006214c

particle scattering evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006213
Super-classes obo:ECO_0006183c
obo:ECO_0007815c
Sub-classes obo:ECO_0006215c

small-angle neutron scattering evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006214
Super-classes obo:ECO_0006212c
obo:ECO_0006184c

small-angle neutron scattering evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006215
Super-classes obo:ECO_0006213c
obo:ECO_0006184c

author inference used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006216
Super-classes obo:ECO_0006185c
obo:ECO_0007751c
obo:ECO_0000302c

author inference used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006217
Super-classes obo:ECO_0007832c
obo:ECO_0007319c
obo:ECO_0006185c

combinatorial experimental and author inference evidence contained in single publication used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006218
Super-classes obo:ECO_0007013c
obo:ECO_0006186c

combinatorial experimental and author inference evidence contained in single publication used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006219
Super-classes obo:ECO_0007592c
obo:ECO_0006186c

X-ray crystallography-based structural model with missing residue coordinates used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006220
Super-classes obo:ECO_0005670c
obo:ECO_0006187c

X-ray crystallography-based structural model with missing residue coordinates used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006221
Super-classes obo:ECO_0006187c
obo:ECO_0005671c

X-ray crystallography-based structural model with high relative B-factor values used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006222
Super-classes obo:ECO_0006188c
obo:ECO_0005670c

X-ray crystallography-based structural model with high relative B-factor values used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006223
Super-classes obo:ECO_0006188c
obo:ECO_0005671c

cryogenic electron microscopy-based structural model with missing residue coordinates used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006224
Super-classes obo:ECO_0006208c
obo:ECO_0006189c

cryogenic electron microscopy-based structural model with missing residue coordinates used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006225
Super-classes obo:ECO_0006209c
obo:ECO_0006189c

cryogenic electron microscopy-based structural model with high relative B-factor values used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006226
Super-classes obo:ECO_0006208c
obo:ECO_0006190c

cryogenic electron microscopy-based structural model with high relative B-factor values used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006227
Super-classes obo:ECO_0006190c
obo:ECO_0006209c

Fourier-transform infrared spectroscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006228
Super-classes obo:ECO_0006191c
obo:ECO_0001258c

Fourier-transform infrared spectroscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006229
Super-classes obo:ECO_0006191c
obo:ECO_0007458c

heat capacity-based evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006230
Super-classes obo:ECO_0000314c
obo:ECO_0006192c
Sub-classes obo:ECO_0006301c
obo:ECO_0006232c

heat capacity-based evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006231
Super-classes obo:ECO_0006192c
obo:ECO_0007307c
Sub-classes obo:ECO_0006302c
obo:ECO_0006233c

differential scanning calorimetry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006232
Super-classes obo:ECO_0006230c
obo:ECO_0006193c

differential scanning calorimetry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006233
Super-classes obo:ECO_0006193c
obo:ECO_0006231c

selective antibody-based structural conformation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006234
Super-classes obo:ECO_0000314c
obo:ECO_0006194c

selective antibody-based structural conformation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006235
Super-classes obo:ECO_0006194c
obo:ECO_0007815c
obo:ECO_0007796c

protein hydrogen-deuterium exchange mass spectrometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006236
Super-classes obo:ECO_0006195c
obo:ECO_0001230c

protein hydrogen-deuterium exchange mass spectrometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006237
Super-classes obo:ECO_0007433c
obo:ECO_0006195c

galactokinase reporter gene assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006238
Super-classes obo:ECO_0000049c
Sub-classes obo:ECO_0006242c
obo:ECO_0006241c

polyadenylated transcript 3'-end-sequencing evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006239
Super-classes obo:ECO_0000295c
Sub-classes obo:ECO_0006244c
obo:ECO_0006243c

colony boundary assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006240
Super-classes obo:ECO_0007077c
Sub-classes obo:ECO_0006246c
obo:ECO_0006245c

galactokinase reporter gene assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006241
Super-classes obo:ECO_0000270c
obo:ECO_0006238c

galactokinase reporter gene assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006242
Super-classes obo:ECO_0006238c
obo:ECO_0007765c

polyadenylated transcript 3'-end-sequencing evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006243
Super-classes obo:ECO_0006239c
obo:ECO_0006068c

polyadenylated transcript 3'-end-sequencing evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006244
Super-classes obo:ECO_0006239c
obo:ECO_0006069c

colony boundary assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006245
Super-classes obo:ECO_0006240c
obo:ECO_0007078c

colony boundary assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006246
Super-classes obo:ECO_0006240c
obo:ECO_0007625c

analytical ultracentrifugation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006247
Super-classes obo:ECO_0005516c
Sub-classes obo:ECO_0006276c
obo:ECO_0006275c

fluorescence polarization evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006248
Super-classes obo:ECO_0000021c
Sub-classes obo:ECO_0006277c
obo:ECO_0006278c

obsolete bait-prey protein pull-down evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006249
Description

This term has been obsoleted as this is same as the term bait-prey hybrid interaction evidence.

rotary shadowing electron microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006250
Super-classes obo:ECO_0005033c
Sub-classes obo:ECO_0006281c
obo:ECO_0006282c

electrospray ionization fourier transform ion cyclotron resonance mass spectrometry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006251
Super-classes obo:ECO_0001096c
Sub-classes obo:ECO_0006284c
obo:ECO_0006283c

magnetic resonance evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006252
Super-classes obo:ECO_0000006c
Sub-classes obo:ECO_0006286c
obo:ECO_0006285c
obo:ECO_0006253c
obo:ECO_0001105c

electron paramagnetic resonance evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006253
Super-classes obo:ECO_0006252c
Sub-classes obo:ECO_0006288c
obo:ECO_0006254c
obo:ECO_0006287c

site-directed spin-labelling electron paramagnetic resonance evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006254
Super-classes obo:ECO_0006253c
Sub-classes obo:ECO_0006290c
obo:ECO_0006289c

deglycosylation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006255
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0006291c
obo:ECO_0006292c

protein fragment functional complementation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006256
Super-classes obo:ECO_0000021c
Sub-classes obo:ECO_0006294c
obo:ECO_0006293c
obo:ECO_0006257c
obo:ECO_0006258c
obo:ECO_0000074c

beta galactosidase functional complementation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006257
Super-classes obo:ECO_0006256c
Sub-classes obo:ECO_0006295c
obo:ECO_0006296c

GAL4-VP16 functional complementation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006258
Super-classes obo:ECO_0006256c
Sub-classes obo:ECO_0006297c
obo:ECO_0006298c

Raman spectroscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006259
Super-classes obo:ECO_0001126c
obo:ECO_0005031c
Sub-classes obo:ECO_0006300c
obo:ECO_0006299c

protein thermal shift assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006260
Super-classes obo:ECO_0006192c
Sub-classes obo:ECO_0006301c
obo:ECO_0006302c

microscale thermophoresis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006261
Super-classes obo:ECO_0000021c
obo:ECO_0001115c
Sub-classes obo:ECO_0006303c
obo:ECO_0006304c

native protein gel electrophoresis evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006262
Super-classes obo:ECO_0000337c
Sub-classes obo:ECO_0006305c
obo:ECO_0006306c

turbidity measurement evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006263
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0006307c
obo:ECO_0006308c

competitive binding evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006264
Super-classes obo:ECO_0000023c
Sub-classes obo:ECO_0006309c
obo:ECO_0006310c

protein unfolding evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006265
Super-classes obo:ECO_0005031c
Sub-classes obo:ECO_0006268c
obo:ECO_0006312c
obo:ECO_0006266c
obo:ECO_0006311c
obo:ECO_0006267c

urea-induced protein unfolding evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006266
Super-classes obo:ECO_0006265c
Sub-classes obo:ECO_0006313c
obo:ECO_0006314c

pH-induced protein unfolding evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006267
Super-classes obo:ECO_0006265c
Sub-classes obo:ECO_0006315c
obo:ECO_0006316c

temperature-induced protein unfolding evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006268
Super-classes obo:ECO_0006265c
Sub-classes obo:ECO_0006318c
obo:ECO_0006317c

cell aggregation evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006269
Super-classes obo:ECO_0001565c
Sub-classes obo:ECO_0006319c
obo:ECO_0006320c

RNA-protein binding evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006270
Super-classes obo:ECO_0000024c
obo:ECO_0000136c
Sub-classes obo:ECO_0006321c
obo:ECO_0006322c

fluorescence microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006271
Super-classes obo:ECO_0001098c
obo:ECO_0001115c
Sub-classes obo:ECO_0006323c
obo:ECO_0007041c
obo:ECO_0006324c

viscosity measurement evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006272
Super-classes obo:ECO_0000002c
Sub-classes obo:ECO_0006325c
obo:ECO_0006326c

dynamic fluorescence quenching evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006273
Super-classes obo:ECO_0000021c
obo:ECO_0001115c
Sub-classes obo:ECO_0006328c
obo:ECO_0001048c
obo:ECO_0006327c

static fluorescence quenching evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0006274
Super-classes obo:ECO_0000021c
obo:ECO_0001115c
Sub-classes obo:ECO_0006330c
obo:ECO_0006329c

analytical ultracentrifugation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006275
Super-classes obo:ECO_0000269c
obo:ECO_0006247c

analytical ultracentrifugation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006276
Super-classes obo:ECO_0006247c
obo:ECO_0007816c

fluorescence polarization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006277
Super-classes obo:ECO_0000353c
obo:ECO_0006248c

fluorescence polarization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006278
Super-classes obo:ECO_0006248c
obo:ECO_0007332c

obsolete bait-prey protein pull-down evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006279

obsolete bait-prey protein pull-down evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006280

rotary shadowing electron microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006281
Super-classes obo:ECO_0006003c
obo:ECO_0006250c

rotary shadowing electron microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006282
Super-classes obo:ECO_0006250c
obo:ECO_0007493c

electrospray ionization fourier transform ion cyclotron resonance mass spectrometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006283
Super-classes obo:ECO_0006251c
obo:ECO_0001230c

electrospray ionization fourier transform ion cyclotron resonance mass spectrometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006284
Super-classes obo:ECO_0006251c
obo:ECO_0007433c

magnetic resonance evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006285
Super-classes obo:ECO_0000269c
obo:ECO_0006252c
Sub-classes obo:ECO_0006287c
obo:ECO_0001238c

magnetic resonance evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006286
Super-classes obo:ECO_0006252c
obo:ECO_0007297c
Sub-classes obo:ECO_0007441c
obo:ECO_0006288c

electron paramagnetic resonance evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006287
Super-classes obo:ECO_0006285c
obo:ECO_0006253c
Sub-classes obo:ECO_0006289c

electron paramagnetic resonance evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006288
Super-classes obo:ECO_0006253c
obo:ECO_0006286c
Sub-classes obo:ECO_0006290c

site-directed spin-labelling electron paramagnetic resonance evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006289
Super-classes obo:ECO_0006287c
obo:ECO_0006254c

site-directed spin-labelling electron paramagnetic resonance evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006290
Super-classes obo:ECO_0006254c
obo:ECO_0006288c

deglycosylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006291
Super-classes obo:ECO_0006255c
obo:ECO_0000314c

deglycosylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006292
Super-classes obo:ECO_0007307c
obo:ECO_0006255c

protein fragment functional complementation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006293
Super-classes obo:ECO_0006256c
obo:ECO_0000353c
Sub-classes obo:ECO_0006297c
obo:ECO_0006080c
obo:ECO_0006295c

protein fragment functional complementation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006294
Super-classes obo:ECO_0006256c
obo:ECO_0007332c
Sub-classes obo:ECO_0006296c
obo:ECO_0006298c
obo:ECO_0007569c

beta galactosidase functional complementation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006295
Super-classes obo:ECO_0006257c
obo:ECO_0006293c

beta galactosidase functional complementation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006296
Super-classes obo:ECO_0006294c
obo:ECO_0006257c

GAL4-VP16 functional complementation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006297
Super-classes obo:ECO_0006293c
obo:ECO_0006258c

GAL4-VP16 functional complementation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006298
Super-classes obo:ECO_0006258c
obo:ECO_0006294c

Raman spectroscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006299
Super-classes obo:ECO_0006259c
obo:ECO_0001258c

Raman spectroscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006300
Super-classes obo:ECO_0006259c
obo:ECO_0007458c
obo:ECO_0007815c

protein thermal shift assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006301
Super-classes obo:ECO_0006260c
obo:ECO_0006230c

protein thermal shift assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006302
Super-classes obo:ECO_0006260c
obo:ECO_0006231c

microscale thermophoresis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006303
Super-classes obo:ECO_0001249c
obo:ECO_0000353c
obo:ECO_0006261c

microscale thermophoresis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006304
Super-classes obo:ECO_0007450c
obo:ECO_0007332c
obo:ECO_0006261c

native protein gel electrophoresis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006305
Super-classes obo:ECO_0006262c
obo:ECO_0000314c

native protein gel electrophoresis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006306
Super-classes obo:ECO_0007769c
obo:ECO_0006262c

turbidity measurement evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006307
Super-classes obo:ECO_0006263c
obo:ECO_0000314c

turbidity measurement evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006308
Super-classes obo:ECO_0006263c
obo:ECO_0007307c

competitive binding evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006309
Super-classes obo:ECO_0006075c
obo:ECO_0006264c

competitive binding evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006310
Super-classes obo:ECO_0007384c
obo:ECO_0006264c

protein unfolding evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006311
Super-classes obo:ECO_0000269c
obo:ECO_0006265c
Sub-classes obo:ECO_0006313c
obo:ECO_0006317c
obo:ECO_0006315c

protein unfolding evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006312
Super-classes obo:ECO_0006265c
obo:ECO_0007815c
Sub-classes obo:ECO_0006316c
obo:ECO_0006318c
obo:ECO_0006314c

urea-induced protein unfolding evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006313
Super-classes obo:ECO_0006311c
obo:ECO_0006266c

urea-induced protein unfolding evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006314
Super-classes obo:ECO_0006266c
obo:ECO_0006312c

pH-induced protein unfolding evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006315
Super-classes obo:ECO_0006267c
obo:ECO_0006311c

pH-induced protein unfolding evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006316
Super-classes obo:ECO_0006312c
obo:ECO_0006267c

temperature-induced protein unfolding evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006317
Super-classes obo:ECO_0006268c
obo:ECO_0006311c

temperature-induced protein unfolding evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006318
Super-classes obo:ECO_0006268c
obo:ECO_0006312c

cell aggregation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006319
Super-classes obo:ECO_0006269c
obo:ECO_0000314c

cell aggregation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006320
Super-classes obo:ECO_0006269c
obo:ECO_0007773c

RNA-protein binding evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006321
Super-classes obo:ECO_0006270c
obo:ECO_0006083c
obo:ECO_0006076c

RNA-protein binding evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006322
Super-classes obo:ECO_0007373c
obo:ECO_0006270c
obo:ECO_0007505c

fluorescence microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006323
Super-classes obo:ECO_0006271c
obo:ECO_0001232c
obo:ECO_0001249c
Sub-classes obo:ECO_0007042c

fluorescence microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006324
Super-classes obo:ECO_0007450c
obo:ECO_0007435c
obo:ECO_0006271c
Sub-classes obo:ECO_0007607c

viscosity measurement evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006325
Super-classes obo:ECO_0000314c
obo:ECO_0006272c

viscosity measurement evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006326
Super-classes obo:ECO_0006272c
obo:ECO_0007307c

dynamic fluorescence quenching evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006327
Super-classes obo:ECO_0001249c
obo:ECO_0000353c
obo:ECO_0006273c
Sub-classes obo:ECO_0001183c

dynamic fluorescence quenching evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006328
Super-classes obo:ECO_0007450c
obo:ECO_0007332c
obo:ECO_0006273c
Sub-classes obo:ECO_0007387c

static fluorescence quenching evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006329
Super-classes obo:ECO_0001249c
obo:ECO_0000353c
obo:ECO_0006274c

static fluorescence quenching evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0006330
Super-classes obo:ECO_0007450c
obo:ECO_0006274c
obo:ECO_0007332c

high throughput mutant phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007000
Super-classes obo:ECO_0006055c
obo:ECO_0000015c
Sub-classes obo:ECO_0007001c
obo:ECO_0007587c

high throughput mutant phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007001
Description

When using the HMP evidence code, the guidelines for IMP should be adhered to (http://geneontology.org/page/imp-inferred-mutant-phenotype)

Super-classes obo:ECO_0007000c
obo:ECO_0006056c
obo:ECO_0000315c

high throughput genetic interaction phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007002
Super-classes obo:ECO_0000011c
obo:ECO_0006055c
Sub-classes obo:ECO_0007588c
obo:ECO_0007003c

high throughput genetic interaction phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007003
Description

When using the HGI evidence code, the guidelines for IGI should be adhered to (http://geneontology.org/page/igi-inferred-genetic-interaction)

Super-classes obo:ECO_0007002c
obo:ECO_0006056c
obo:ECO_0000316c

high throughput direct assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007004
Super-classes obo:ECO_0000002c
obo:ECO_0006055c
Sub-classes obo:ECO_0007589c
obo:ECO_0007005c

high throughput direct assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007005
Description

When using the HDA evidence code, the guidelines for IDA should be adhered to (http://geneontology.org/page/ida-inferred-direct-assay)

Super-classes obo:ECO_0000314c
obo:ECO_0006056c
obo:ECO_0007004c

high throughput expression pattern evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007006
Super-classes obo:ECO_0000008c
obo:ECO_0006055c
Sub-classes obo:ECO_0007590c
obo:ECO_0007007c

high throughput expression pattern evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007007
Description

When using the HEP evidence code, the guidelines for EXP should be adhered to (http://geneontology.org/page/iep-inferred-expression-pattern)

Super-classes obo:ECO_0006056c
obo:ECO_0000270c
obo:ECO_0007006c

radioligand binding assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007008
Super-classes obo:ECO_0000024c
Sub-classes obo:ECO_0007591c
obo:ECO_0007009c

radioligand binding assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007009
Super-classes obo:ECO_0006076c
obo:ECO_0007008c

combinatorial experimental and author inference evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007011
Super-classes obo:ECO_0000212c
Sub-classes obo:ECO_0007592c
obo:ECO_0006186c
obo:ECO_0007013c

combinatorial experimental and curator inference evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007012
Super-classes obo:ECO_0000212c
Sub-classes obo:ECO_0007014c
obo:ECO_0007593c

combinatorial experimental and author inference evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007013
Super-classes obo:ECO_0000244c
obo:ECO_0007011c
Sub-classes obo:ECO_0006218c

combinatorial experimental and curator inference evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007014
Super-classes obo:ECO_0007012c
obo:ECO_0000244c

voltammetry evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007015
Super-classes obo:ECO_0000335c
Sub-classes obo:ECO_0007594c
obo:ECO_0007016c

voltammetry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007016
Super-classes obo:ECO_0007015c
obo:ECO_0000314c

photoconversion evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007017
Super-classes obo:ECO_0001115c
Sub-classes obo:ECO_0007595c
obo:ECO_0007018c

photoconversion evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007018
Super-classes obo:ECO_0001249c
obo:ECO_0007017c

agglutination test evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007019
Super-classes obo:ECO_0000040c
Sub-classes obo:ECO_0007025c
obo:ECO_0007023c
obo:ECO_0007027c
obo:ECO_0007596c
obo:ECO_0007020c
obo:ECO_0007021c
obo:ECO_0007029c

agglutination test evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007020
Super-classes obo:ECO_0006078c
obo:ECO_0007019c
Sub-classes obo:ECO_0007028c
obo:ECO_0007026c
obo:ECO_0007030c
obo:ECO_0007022c
obo:ECO_0007024c

slide agglutination test evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007021
Super-classes obo:ECO_0007019c
Sub-classes obo:ECO_0007022c
obo:ECO_0007597c

slide agglutination test evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007022
Super-classes obo:ECO_0007021c
obo:ECO_0007020c

direct Coombs test evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007023
Super-classes obo:ECO_0007019c
Sub-classes obo:ECO_0007598c
obo:ECO_0007024c

direct Coombs test evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007024
Super-classes obo:ECO_0007023c
obo:ECO_0007020c

indirect Coombs test evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007025
Super-classes obo:ECO_0007019c
Sub-classes obo:ECO_0007026c
obo:ECO_0007599c

indirect Coombs test evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007026
Super-classes obo:ECO_0007020c
obo:ECO_0007025c

direct hemagglutination assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007027
Super-classes obo:ECO_0007019c
Sub-classes obo:ECO_0007028c
obo:ECO_0007600c

direct hemagglutination assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007028
Super-classes obo:ECO_0007020c
obo:ECO_0007027c

viral hemagglutination inhibition assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007029
Super-classes obo:ECO_0007019c
Sub-classes obo:ECO_0007601c
obo:ECO_0007030c

viral hemagglutination inhibition assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007030
Super-classes obo:ECO_0007020c
obo:ECO_0007029c

compement fixation assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007031
Super-classes obo:ECO_0000040c
Sub-classes obo:ECO_0007032c
obo:ECO_0007602c

compement fixation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007032
Super-classes obo:ECO_0007031c
obo:ECO_0006078c

neutralization test assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007033
Super-classes obo:ECO_0000040c
Sub-classes obo:ECO_0007603c
obo:ECO_0007034c

neutralization test assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007034
Super-classes obo:ECO_0006078c
obo:ECO_0007033c

copper transport assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007035
Super-classes obo:ECO_0000134c
Sub-classes obo:ECO_0007604c
obo:ECO_0007036c

copper transport assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007036
Super-classes obo:ECO_0000314c
obo:ECO_0007035c

5-cyano-2,3-ditolyl tetrazolium chloride staining evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007037
Super-classes obo:ECO_0005019c
Sub-classes obo:ECO_0007605c
obo:ECO_0007038c

5-cyano-2,3-ditolyl tetrazolium chloride staining evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007038
Super-classes obo:ECO_0007037c
obo:ECO_0000314c

plaque assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007039
Super-classes obo:ECO_0001563c
Restrictions obo:IAO_0000136op some obo:GO_0009607c
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb3542c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb3537c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb3542c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb3537c)
obo:OBI_0000312op some obo:OBI_0000978c
Sub-classes obo:ECO_0007040c
obo:ECO_0007606c

plaque assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007040
Super-classes obo:ECO_0007039c
obo:ECO_0000314c

epifluorescence microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007041
Super-classes obo:ECO_0006271c
Sub-classes obo:ECO_0007042c
obo:ECO_0007607c

epifluorescence microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007042
Super-classes obo:ECO_0007041c
obo:ECO_0006323c

transmission electron microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007043
Super-classes obo:ECO_0005033c
Sub-classes obo:ECO_0007608c
obo:ECO_0007044c

transmission electron microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007044
Super-classes obo:ECO_0007043c
obo:ECO_0006003c

scanning electron microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007045
Super-classes obo:ECO_0005033c
Sub-classes obo:ECO_0007609c
obo:ECO_0007046c

scanning electron microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007046
Super-classes obo:ECO_0007045c
obo:ECO_0006003c

time-lapsed microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007047
Super-classes obo:ECO_0001098c
Sub-classes obo:ECO_0007048c
obo:ECO_0007610c

time-lapsed microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007048
Super-classes obo:ECO_0007047c
obo:ECO_0001232c

phase contrast microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007049
Super-classes obo:ECO_0001098c
Sub-classes obo:ECO_0007050c
obo:ECO_0007611c

phase contrast microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007050
Super-classes obo:ECO_0001232c
obo:ECO_0007049c

transmitted light brightfied mircoscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007051
Super-classes obo:ECO_0001098c
Sub-classes obo:ECO_0007052c
obo:ECO_0007612c

transmitted light brightfied mircoscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007052
Super-classes obo:ECO_0007051c
obo:ECO_0001232c

koehler illumination microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007053
Super-classes obo:ECO_0001098c
Sub-classes obo:ECO_0007613c
obo:ECO_0007054c

koehler illumination microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007054
Super-classes obo:ECO_0001232c
obo:ECO_0007053c

differential interference contrast microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007055
Super-classes obo:ECO_0001098c
Sub-classes obo:ECO_0007056c
obo:ECO_0007614c

differential interference contrast microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007056
Super-classes obo:ECO_0007055c
obo:ECO_0001232c

extended field laser confocal microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007057
Super-classes obo:ECO_0005587c
Sub-classes obo:ECO_0007615c
obo:ECO_0007058c

extended field laser confocal microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007058
Super-classes obo:ECO_0005589c
obo:ECO_0007057c

confocal laser scanning microscopy evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007059
Super-classes obo:ECO_0005587c
Sub-classes obo:ECO_0007616c
obo:ECO_0007060c

confocal laser scanning microscopy evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007060
Super-classes obo:ECO_0005589c
obo:ECO_0007059c

light scattering evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007061
Super-classes obo:ECO_0005031c
Sub-classes obo:ECO_0007062c
obo:ECO_0006182c
obo:ECO_0007617c
obo:ECO_0007063c
obo:ECO_0007065c

light scattering evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007062
Super-classes obo:ECO_0007061c
obo:ECO_0000269c
Sub-classes obo:ECO_0007064c
obo:ECO_0007066c
obo:ECO_0006210c

dynamic light scattering assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007063
Super-classes obo:ECO_0007061c
Sub-classes obo:ECO_0007618c
obo:ECO_0007064c

dynamic light scattering assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007064
Super-classes obo:ECO_0007062c
obo:ECO_0007063c

static light scattering assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007065
Super-classes obo:ECO_0007061c
Sub-classes obo:ECO_0007619c
obo:ECO_0007066c

static light scattering assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007066
Super-classes obo:ECO_0007065c
obo:ECO_0007062c

colony papillation assay phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007067
Super-classes obo:ECO_0007077c
Sub-classes obo:ECO_0007620c
obo:ECO_0007068c

colony papillation assay phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007068
Super-classes obo:ECO_0007078c
obo:ECO_0007067c

crystal violet staining evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007069
Super-classes obo:ECO_0005019c
Sub-classes obo:ECO_0007621c
obo:ECO_0007070c

crystal violet staining evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007070
Super-classes obo:ECO_0007069c
obo:ECO_0000314c

flow cell biofilm assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007071
Super-classes obo:ECO_0006020c
Restrictions obo:OBI_0000312op some (obo:OBI_0000978c and n6d93943533d34a84b8c3678390dd5edfb3612c)
Sub-classes obo:ECO_0007622c
obo:ECO_0007072c

flow cell biofilm assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007072
Super-classes obo:ECO_0006021c
obo:ECO_0007071c

bacterial 2-hybrid assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007073
Super-classes obo:ECO_0000025c
Sub-classes obo:ECO_0007623c
obo:ECO_0007074c

bacterial 2-hybrid assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007074
Super-classes obo:ECO_0006077c
obo:ECO_0007073c

phenomic profiling assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007075
Description

A phenome is defined as the SET of physical and biochemical traits, or, as the SET of all phenotypes expressed, i.e. a phenome is defined as the sum total of all phenotypic traits.

Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0007624c
obo:ECO_0007076c

phenomic profiling assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007076
Super-classes obo:ECO_0007075c
obo:ECO_0007634c

colony morphology phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007077
Super-classes obo:ECO_0000059c
Sub-classes obo:ECO_0006240c
obo:ECO_0007081c
obo:ECO_0007067c
obo:ECO_0007625c
obo:ECO_0007079c
obo:ECO_0007078c

colony morphology phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007078
Super-classes obo:ECO_0007634c
obo:ECO_0007077c
Sub-classes obo:ECO_0007080c
obo:ECO_0007068c
obo:ECO_0007082c
obo:ECO_0006245c

colony color phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007079
Super-classes obo:ECO_0007077c
Sub-classes obo:ECO_0007080c
obo:ECO_0007626c

colony color phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007080
Super-classes obo:ECO_0007079c
obo:ECO_0007078c

colony size phenotypic evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007081
Super-classes obo:ECO_0007077c
Sub-classes obo:ECO_0007082c
obo:ECO_0007627c
obo:ECO_0001571c

colony size phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007082
Super-classes obo:ECO_0007081c
obo:ECO_0007078c
Sub-classes obo:ECO_000157c

zone of inhibition evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007083
Super-classes obo:ECO_0001563c
Restrictions obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb3648c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb3643c)
obo:OBI_0000312op some (obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb3648c and obo:OBI_0000070c and n6d93943533d34a84b8c3678390dd5edfb3643c)
obo:IAO_0000136op some obo:GO_0042221c
obo:OBI_0000312op some obo:OBI_0000978c
Sub-classes obo:ECO_0007628c
obo:ECO_0005605c
obo:ECO_0007085c
obo:ECO_0007084c

zone of inhibition evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007084
Super-classes obo:ECO_0000314c
obo:ECO_0007083c
Sub-classes obo:ECO_0007086c
obo:ECO_0007700c

Etest evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007085
Super-classes obo:ECO_0007083c
Restrictions obo:IAO_0000136op some obo:GO_0046677c
Sub-classes obo:ECO_0007629c
obo:ECO_0007086c

Etest evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007086
Super-classes obo:ECO_0007084c
obo:ECO_0007085c

ribosome profiling evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007087
Super-classes obo:ECO_0000008c
Sub-classes obo:ECO_0007088c
obo:ECO_0007630c

ribosome profiling evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007088
Super-classes obo:ECO_0007087c
obo:ECO_0000270c

loss-of-function mutant phenotype evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007089
Super-classes obo:ECO_0000315c
obo:ECO_0000016c

structural similarity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007090
Super-classes obo:ECO_0000027c
obo:ECO_0000252c

gain-of-function mutant phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007092
Super-classes obo:ECO_0000042c
obo:ECO_0000315c

voucher specimen phenotypic analysis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007093
Super-classes obo:ECO_0000050c
obo:ECO_0007634c

positional similarity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007094
Super-classes obo:ECO_0000252c
obo:ECO_0000060c

quantitative trait analysis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007095
Super-classes obo:ECO_0000061c
obo:ECO_0007634c

compositional similarity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007096
Super-classes obo:ECO_0000252c
obo:ECO_0000063c

developmental similarity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007097
Super-classes obo:ECO_0000252c
obo:ECO_0000067c

morphological similarity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007098
Super-classes obo:ECO_0000071c
obo:ECO_0000252c

gene expression similarity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007099
Super-classes obo:ECO_0000075c
obo:ECO_0000252c

methylation-specific polymerase chain reaction evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007100
Super-classes obo:ECO_0000077c
obo:ECO_0001198c

southern hybridization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007101
Super-classes obo:ECO_0000078c
obo:ECO_0000269c

intermethylated site amplification evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007102
Super-classes obo:ECO_0000086c
obo:ECO_0001198c

epitope-tagged protein immunolocalization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007103
Super-classes obo:ECO_0000092c
obo:ECO_0006031c

co-fractionation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007104
Super-classes obo:ECO_0000102c
obo:ECO_0006005c

green fluorescent protein fusion protein localization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007106
Super-classes obo:ECO_0000126c
obo:ECO_0000314c

yellow fluorescent protein fusion protein localization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007107
Super-classes obo:ECO_0000128c
obo:ECO_0000314c

beta-glucuronidase fusion protein localization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007108
Super-classes obo:ECO_0000314c
obo:ECO_0000130c

beta-galactosidase fusion protein localization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007109
Super-classes obo:ECO_0000314c
obo:ECO_0000132c

thin layer chromatography evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007110
Super-classes obo:ECO_0000140c
obo:ECO_0007680c

in vitro recombinant protein transcription reconstitution assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007111
Super-classes obo:ECO_0000314c
obo:ECO_0000152c

protein separation followed by direct sequencing evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007112
Super-classes obo:ECO_0000158c
obo:ECO_0006005c

protein separation followed by fragment identification evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007113
Super-classes obo:ECO_0000160c
obo:ECO_0006005c

heterologous system uptake evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007114
Super-classes obo:ECO_0000314c
obo:ECO_0000162c

two-electrode voltage clamp recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007115
Super-classes obo:ECO_0006006c
obo:ECO_0000166c

biochemical trait analysis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007116
Super-classes obo:ECO_0000172c
obo:ECO_0007634c

mutant physiological response evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007117
Super-classes obo:ECO_0000315c
obo:ECO_0000174c

mutant visible phenotype evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007118
Super-classes obo:ECO_0000176c
obo:ECO_0000315c

in vivo assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007119
Super-classes obo:ECO_0000314c
obo:ECO_0000178c

animal model system study evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007120
Super-classes obo:ECO_0000269c
obo:ECO_0000179c

clinical study evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007121
Super-classes obo:ECO_0000269c
obo:ECO_0000180c

in vitro assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007122
Super-classes obo:ECO_0000181c
obo:ECO_0000314c

enzyme inhibition evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007123
Super-classes obo:ECO_0005801c
obo:ECO_0007707c
obo:ECO_0000184c

Illumina sequencing evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007125
Super-classes obo:ECO_0000269c
obo:ECO_0000222c

454 pyrosequencing evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007126
Super-classes obo:ECO_0000223c
obo:ECO_0000269c

SOLiD sequencing evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007127
Super-classes obo:ECO_0000224c
obo:ECO_0000269c

chain termination sequencing evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007128
Super-classes obo:ECO_0000225c
obo:ECO_0000269c

chromatin immunoprecipitation-qPCR evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007129
Super-classes obo:ECO_0005644c
obo:ECO_0000228c

4C evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007130
Super-classes obo:ECO_0000269c
obo:ECO_0000234c

5C evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007131
Super-classes obo:ECO_0000269c
obo:ECO_0000235c

3C-qPCR evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007133
Super-classes obo:ECO_0000269c
obo:ECO_0000237c

Hi-C evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007134
Super-classes obo:ECO_0000269c
obo:ECO_0000238c

3C-seq evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007135
Super-classes obo:ECO_0000269c
obo:ECO_0000239c

environmental perturbation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007136
Super-classes obo:ECO_0007634c
obo:ECO_0000241c

tissue ablation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007137
Super-classes obo:ECO_0000242c
obo:ECO_0007634c

tissue grafting phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007138
Super-classes obo:ECO_0000243c
obo:ECO_0007634c

cytochalasin experiment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007141
Super-classes obo:ECO_0000299c
obo:ECO_0007634c

green fluorescent protein immunolocalization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007142
Super-classes obo:ECO_0006031c
obo:ECO_0000300c

beta-galactosidase protein immunolocalization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007143
Super-classes obo:ECO_0006031c
obo:ECO_0000301c

cap analysis of gene expression evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007144
Super-classes obo:ECO_0000309c
obo:ECO_0000291c

nano-cap analysis of gene expression evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007145
Super-classes obo:ECO_0000291c
obo:ECO_0000310c

particle size and count assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007146
Super-classes obo:ECO_0000314c
obo:ECO_0000334c

competitive growth assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007147
Super-classes obo:ECO_0000314c
obo:ECO_0000336c

pulsed-field gel electrophoresis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007148
Super-classes obo:ECO_0000338c
obo:ECO_0000314c

two-dimensional agarose gel electrophoresis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007149
Super-classes obo:ECO_0000314c
obo:ECO_0000339c

plasmid maintenance assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007150
Super-classes obo:ECO_0000340c
obo:ECO_0000269c

specific protein inhibition by antibody evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007151
Super-classes obo:ECO_0007707c
obo:ECO_0000341c

single exon transcript confirmation via alignment evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007152
Super-classes obo:ECO_0000247c
obo:ECO_0000345c

phylogenetic distribution evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007153
Super-classes obo:ECO_0000252c
obo:ECO_0000355c

differential geneset expression evidence from microarray experiment (GSEA, Fisher-exact) used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007154
Super-classes obo:ECO_0000358c
obo:ECO_0000291c

differential geneset expression evidence from RNA-seq experiment (GSEA, Fisher-exact) used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007155
Super-classes obo:ECO_0000359c
obo:ECO_0000291c

biological target-disease association via drug evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007156
Super-classes obo:ECO_0000360c
obo:ECO_0000269c

cell staining evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007157
Super-classes obo:ECO_0000314c
obo:ECO_0001603c

visual sequence inspection evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007158

ATP bioluminescence assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007159
Super-classes obo:ECO_0005011c
obo:ECO_0000314c

missense mutation pohenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007160
Super-classes obo:ECO_0005506c
obo:ECO_0001247c

nonsense mutation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007161
Super-classes obo:ECO_0005507c
obo:ECO_0001247c

silent mutation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007162
Super-classes obo:ECO_0005508c
obo:ECO_0001247c

insertion mutation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007163
Super-classes obo:ECO_0005509c
obo:ECO_0000315c

duplication mutation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007164
Super-classes obo:ECO_0007634c
obo:ECO_0005511c

frameshift mutation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007165
Super-classes obo:ECO_0000315c
obo:ECO_0005512c

repeat expansion mutation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007166
Super-classes obo:ECO_0000315c
obo:ECO_0005513c

splice site mutation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007167
Super-classes obo:ECO_0005514c
obo:ECO_0000315c

translocation mutation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007168
Super-classes obo:ECO_0005515c
obo:ECO_0000315c

in-gel protein kinase assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007169
Super-classes obo:ECO_0005801c
obo:ECO_0005562c

macroscopic current trace evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007170
Super-classes obo:ECO_0006006c
obo:ECO_0005563c

current density evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007171
Super-classes obo:ECO_0006006c
obo:ECO_0005564c

sustained current evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007172
Super-classes obo:ECO_0006006c
obo:ECO_0005566c

use dependence of inactivation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007173
Super-classes obo:ECO_0006006c
obo:ECO_0005570c

current clamp recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007174
Super-classes obo:ECO_0005571c
obo:ECO_0006006c

whole-cell voltage clamp recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007175
Super-classes obo:ECO_0006006c
obo:ECO_0005572c

cell-attached single-channel recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007176
Super-classes obo:ECO_0005573c
obo:ECO_0006013c

cell-detached inside-out single-channel recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007177
Super-classes obo:ECO_0005574c
obo:ECO_0006013c

reconstituted bilayer single-channel patch recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007178
Super-classes obo:ECO_0006013c
obo:ECO_0005575c

electroencephalography recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007179
Super-classes obo:ECO_0006006c
obo:ECO_0005577c

cell-detached outside-out single-channel recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007180
Super-classes obo:ECO_0005582c
obo:ECO_0006013c

cut-open oocyte voltage clamp recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007181
Super-classes obo:ECO_0006006c
obo:ECO_0005583c

macropatch voltage clamp recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007182
Super-classes obo:ECO_0005584c
obo:ECO_0006006c

protein mass spectrometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007184
Super-classes obo:ECO_0005603c
obo:ECO_0001230c

cross-streak test evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007185
Super-classes obo:ECO_0005604c
obo:ECO_0000314c

tethered cell assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007186
Super-classes obo:ECO_0000314c
obo:ECO_0005607c

tumble frequency assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007187
Super-classes obo:ECO_0000314c
obo:ECO_0005608c

capillary assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007188
Super-classes obo:ECO_0000314c
obo:ECO_0005609c

inference from experimental data evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007189

inference from phenotype manipulation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007190

inference by association of genotype from phenotype used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007191
Super-classes obo:ECO_0001237c
Sub-classes obo:ECO_0007295c

motility assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007192
Super-classes obo:ECO_0000314c
obo:ECO_0005803c

loss-of-function mutant phenotype evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007193
Super-classes obo:ECO_0000016c
obo:ECO_0007325c

structural similarity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007194
Super-classes obo:ECO_0007824c
obo:ECO_0000027c

gain-of-function mutant phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007196
Super-classes obo:ECO_0000042c
obo:ECO_0007325c

voucher specimen phenotypic analysis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007197
Super-classes obo:ECO_0000050c
obo:ECO_0007635c

positional similarity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007198
Super-classes obo:ECO_0007824c
obo:ECO_0000060c

quantitative trait analysis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007199
Super-classes obo:ECO_0007635c
obo:ECO_0000061c

compositional similarity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007200
Super-classes obo:ECO_0007824c
obo:ECO_0000063c

developmental similarity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007201
Super-classes obo:ECO_0007824c
obo:ECO_0000067c

morphological similarity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007202
Super-classes obo:ECO_0000071c
obo:ECO_0007824c

gene expression similarity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007203
Super-classes obo:ECO_0007824c
obo:ECO_0000075c

methylation-specific polymerase chain reaction evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007204
Super-classes obo:ECO_0000077c
obo:ECO_0007401c

southern hybridization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007205
Super-classes obo:ECO_0000078c
obo:ECO_0007817c

intermethylated site amplification evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007206
Super-classes obo:ECO_0007401c
obo:ECO_0000086c

epitope-tagged protein immunolocalization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007207
Super-classes obo:ECO_0007486c
obo:ECO_0000092c

co-fractionation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007208
Super-classes obo:ECO_0007534c
obo:ECO_0000102c

green fluorescent protein fusion protein localization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007210
Super-classes obo:ECO_0000126c
obo:ECO_0007808c

yellow fluorescent protein fusion protein localization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007211
Super-classes obo:ECO_0000128c
obo:ECO_0007808c

beta-glucuronidase fusion protein localization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007212
Super-classes obo:ECO_0007808c
obo:ECO_0000130c

beta-galactosidase fusion protein localization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007213
Super-classes obo:ECO_0007808c
obo:ECO_0000132c

thin layer chromatography evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007214
Super-classes obo:ECO_0000140c
obo:ECO_0007681c

in vitro recombinant protein transcription reconstitution assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007215
Super-classes obo:ECO_0000152c
obo:ECO_0007804c

protein separation followed by direct sequencing evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007216
Super-classes obo:ECO_0000158c
obo:ECO_0007787c

protein separation followed by fragment identification evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007217
Super-classes obo:ECO_0000160c
obo:ECO_0007787c

heterologous system uptake evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007218
Super-classes obo:ECO_0007789c
obo:ECO_0000162c

two-electrode voltage clamp recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007219
Super-classes obo:ECO_0007766c
obo:ECO_0000166c

biochemical trait analysis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007220
Super-classes obo:ECO_0000172c
obo:ECO_0007635c

mutant physiological response evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007221
Super-classes obo:ECO_0000174c
obo:ECO_0007325c

mutant visible phenotype evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007222
Super-classes obo:ECO_0000176c
obo:ECO_0007325c

in vivo assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007223
Super-classes obo:ECO_0007307c
obo:ECO_0000178c

animal model system study evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007224
Super-classes obo:ECO_0000179c
obo:ECO_0007297c

clinical study evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007225
Super-classes obo:ECO_0007297c
obo:ECO_0000180c

in vitro assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007226
Super-classes obo:ECO_0000181c
obo:ECO_0007307c

enzyme inhibition evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007227
Super-classes obo:ECO_0007785c
obo:ECO_0000184c
obo:ECO_0007468c

Illumina sequencing evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007229
Super-classes obo:ECO_0007814c
obo:ECO_0000222c

454 pyrosequencing evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007230
Super-classes obo:ECO_0007814c
obo:ECO_0000223c

SOLiD sequencing evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007231
Super-classes obo:ECO_0007814c
obo:ECO_0000224c

chain termination sequencing evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007232
Super-classes obo:ECO_0007813c
obo:ECO_0000225c

chromatin immunoprecipitation-qPCR evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007233
Super-classes obo:ECO_0007786c
obo:ECO_0000228c

4C evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007234
Super-classes obo:ECO_0000234c
obo:ECO_0007822c

5C evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007235
Super-classes obo:ECO_0000235c
obo:ECO_0007822c

3C-qPCR evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007237
Super-classes obo:ECO_0000237c
obo:ECO_0007823c

Hi-C evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007238
Super-classes obo:ECO_0007822c
obo:ECO_0000238c

3C-seq evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007239
Super-classes obo:ECO_0000239c
obo:ECO_0007822c

environmental perturbation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007240
Super-classes obo:ECO_0007635c
obo:ECO_0000241c

tissue ablation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007241
Super-classes obo:ECO_0007810c
obo:ECO_0000242c

tissue grafting phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007242
Super-classes obo:ECO_0007810c
obo:ECO_0000243c

cytochalasin experiment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007245
Super-classes obo:ECO_0007811c
obo:ECO_0000299c

green fluorescent protein immunolocalization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007246
Super-classes obo:ECO_0000300c
obo:ECO_0007486c

beta-galactosidase protein immunolocalization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007247
Super-classes obo:ECO_0000301c
obo:ECO_0007486c

cap analysis of gene expression evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007248
Super-classes obo:ECO_0000309c
obo:ECO_0007303c

nano-cap analysis of gene expression evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007249
Super-classes obo:ECO_0000310c
obo:ECO_0007303c

particle size and count assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007250
Super-classes obo:ECO_0007307c
obo:ECO_0000334c

competitive growth assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007251
Super-classes obo:ECO_0007775c
obo:ECO_0000336c

pulsed-field gel electrophoresis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007252
Super-classes obo:ECO_0000338c
obo:ECO_0007769c

two-dimensional agarose gel electrophoresis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007253
Super-classes obo:ECO_0007769c
obo:ECO_0000339c

plasmid maintenance assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007254
Super-classes obo:ECO_0000340c
obo:ECO_0007297c

specific protein inhibition by antibody evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007255
Super-classes obo:ECO_0007785c
obo:ECO_0000341c

single exon transcript confirmation via alignment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007256
Super-classes obo:ECO_0000345c
obo:ECO_0000248c

phylogenetic distribution evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007257
Super-classes obo:ECO_0007826c
obo:ECO_0000355c

differential geneset expression evidence from microarray experiment (GSEA, Fisher-exact) used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007258
Super-classes obo:ECO_0000358c
obo:ECO_0007303c

differential geneset expression evidence from RNA-seq experiment (GSEA, Fisher-exact) used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007259
Super-classes obo:ECO_0007303c
obo:ECO_0000359c

biological target-disease association via drug evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007260
Super-classes obo:ECO_0007297c
obo:ECO_0000360c

cell staining evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007261
Super-classes obo:ECO_0007773c
obo:ECO_0001603c

visual sequence inspection evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007262

ATP bioluminescence assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007263
Super-classes obo:ECO_0005011c
obo:ECO_0007774c

missense mutation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007264
Super-classes obo:ECO_0005506c
obo:ECO_0007448c

nonsense mutation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007265
Super-classes obo:ECO_0005507c
obo:ECO_0007448c

silent mutation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007266
Super-classes obo:ECO_0007448c
obo:ECO_0005508c

insertion mutation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007267
Super-classes obo:ECO_0007325c
obo:ECO_0005509c

duplication mutation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007268
Super-classes obo:ECO_0007635c
obo:ECO_0005511c

frameshift mutation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007269
Super-classes obo:ECO_0005512c
obo:ECO_0007325c

repeat expansion mutation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007270
Super-classes obo:ECO_0005513c
obo:ECO_0007325c

splice site mutation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007271
Super-classes obo:ECO_0007325c
obo:ECO_0005514c

translocation mutation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007272
Super-classes obo:ECO_0005515c
obo:ECO_0007325c

in-gel protein kinase assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007273
Super-classes obo:ECO_0007767c
obo:ECO_0005562c

macroscopic current trace evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007274
Super-classes obo:ECO_0005563c
obo:ECO_0007766c

current density evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007275
Super-classes obo:ECO_0007535c
obo:ECO_0005564c

sustained current evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007276
Super-classes obo:ECO_0007535c
obo:ECO_0005566c

use dependence of inactivation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007277
Super-classes obo:ECO_0005570c
obo:ECO_0007535c

current clamp recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007278
Super-classes obo:ECO_0007535c
obo:ECO_0005571c

whole-cell voltage clamp recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007279
Super-classes obo:ECO_0005572c
obo:ECO_0007766c

cell-attached single-channel recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007280
Super-classes obo:ECO_0005573c
obo:ECO_0007537c

cell-detached inside-out single-channel recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007281
Super-classes obo:ECO_0007537c
obo:ECO_0005574c

reconstituted bilayer single-channel patch recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007282
Super-classes obo:ECO_0005575c
obo:ECO_0007537c

electroencephalography recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007283
Super-classes obo:ECO_0005577c
obo:ECO_0007535c

cell-detached outside-out single-channel recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007284
Super-classes obo:ECO_0005582c
obo:ECO_0007537c

cut-open oocyte voltage clamp recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007285
Super-classes obo:ECO_0005583c
obo:ECO_0007766c

macropatch voltage clamp recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007286
Super-classes obo:ECO_0005584c
obo:ECO_0007766c

protein mass spectrometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007288
Super-classes obo:ECO_0005603c
obo:ECO_0007433c

cross-streak test evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007289
Super-classes obo:ECO_0007775c
obo:ECO_0005604c

tethered cell assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007290
Super-classes obo:ECO_0007780c
obo:ECO_0005607c

tumble frequency assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007291
Super-classes obo:ECO_0005608c
obo:ECO_0007780c

capillary assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007292
Super-classes obo:ECO_0007780c
obo:ECO_0005609c

inference from experimental data evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007293

inference from phenotype manipulation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007294

inference by association of genotype from phenotype used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007295
Super-classes obo:ECO_0007440c
obo:ECO_0005613c
obo:ECO_0007191c

motility assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007296
Super-classes obo:ECO_0007307c
obo:ECO_0005803c

experimental evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007297
Super-classes obo:ECO_0000501c
obo:ECO_0000006c
Sub-classes obo:ECO_0007821c
obo:ECO_0007822c
obo:ECO_0007681c
obo:ECO_0001831c
obo:ECO_0007635c
obo:ECO_0007260c
obo:ECO_0007225c
obo:ECO_0007816c
obo:ECO_0007815c
obo:ECO_0007430c
obo:ECO_0007812c
obo:ECO_0007307c
obo:ECO_0007254c
obo:ECO_0007298c
obo:ECO_0007224c
obo:ECO_0001593c
obo:ECO_0006286c
obo:ECO_0007530c

expression pattern evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007298
Super-classes obo:ECO_0000008c
obo:ECO_0007297c
Sub-classes obo:ECO_0007765c
obo:ECO_0007309c
obo:ECO_0007590c
obo:ECO_0007303c
obo:ECO_0007630c
obo:ECO_0001837c

Affymetrix GeneChip evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007299
Super-classes obo:ECO_0007300c
obo:ECO_0000101c

cRNA to DNA expression microarray evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007300
Super-classes obo:ECO_0007301c
obo:ECO_0000062c
Sub-classes obo:ECO_0007299c

expression microarray evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007301
Super-classes obo:ECO_0000058c
obo:ECO_0007303c
Sub-classes obo:ECO_0007300c
obo:ECO_0007313c
obo:ECO_0005630c

differential methylation hybridization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007302
Super-classes obo:ECO_0000069c
obo:ECO_0007401c

transcript expression evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007303
Super-classes obo:ECO_0000009c
obo:ECO_0007298c
Sub-classes obo:ECO_0007259c
obo:ECO_0007314c
obo:ECO_0007318c
obo:ECO_0007317c
obo:ECO_0007520c
obo:ECO_0007518c
obo:ECO_0007248c
obo:ECO_0006069c
obo:ECO_0007249c
obo:ECO_0007258c
obo:ECO_0007301c

Nimblegen array evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007304
Super-classes obo:ECO_0000105c
obo:ECO_0005630c

array-based sequence capture evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007305
Super-classes obo:ECO_0007817c
obo:ECO_0000093c

qualitative western immunoblotting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007306
Super-classes obo:ECO_0000112c
obo:ECO_0007796c
obo:ECO_0007309c
obo:ECO_0007770c
Sub-classes obo:ECO_0006171c

direct assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007307
Super-classes obo:ECO_0007297c
obo:ECO_0000002c
Sub-classes obo:ECO_0007455c
obo:ECO_0007332c
obo:ECO_0007785c
obo:ECO_0007462c
obo:ECO_0007468c
obo:ECO_0007801c
obo:ECO_0007296c
obo:ECO_0007798c
obo:ECO_0007768c
obo:ECO_0007782c
obo:ECO_0007797c
obo:ECO_0007450c
obo:ECO_0006292c
obo:ECO_0007806c
obo:ECO_0001575c
obo:ECO_0007783c
obo:ECO_0007790c
obo:ECO_0007535c
obo:ECO_0007796c
obo:ECO_0007447c
obo:ECO_0007365c
obo:ECO_0007805c
obo:ECO_0007250c
obo:ECO_0007534c
obo:ECO_0007772c
obo:ECO_0006308c
obo:ECO_0006231c
obo:ECO_0007471c
obo:ECO_0007803c
obo:ECO_0007799c
obo:ECO_0007800c
obo:ECO_0007795c
obo:ECO_0007771c
obo:ECO_0007223c
obo:ECO_0007791c
obo:ECO_0007788c
obo:ECO_0007444c
obo:ECO_0007773c
obo:ECO_0007589c
obo:ECO_0007792c
obo:ECO_0007563c
obo:ECO_0007226c
obo:ECO_0007789c
obo:ECO_0007351c
obo:ECO_0007794c
obo:ECO_0006326c
obo:ECO_0007793c
obo:ECO_0007363c
obo:ECO_0007802c
obo:ECO_0007769c
obo:ECO_0007487c

protein expression evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007309
Super-classes obo:ECO_0000010c
obo:ECO_0007298c
Sub-classes obo:ECO_0007312c
obo:ECO_0007311c
obo:ECO_0007306c
obo:ECO_0007310c

expression library screen evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007310
Super-classes obo:ECO_0007309c
obo:ECO_0000114c

heterologous protein expression evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007311
Super-classes obo:ECO_0007309c
obo:ECO_0000154c

spatial pattern of protein expression evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007312
Super-classes obo:ECO_0007309c
obo:ECO_0000045c

DNA to cDNA expression microarray evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007313
Super-classes obo:ECO_0007301c
obo:ECO_0000104c

differential hybridization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007314
Super-classes obo:ECO_0000116c
obo:ECO_0007303c

RNA protection assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007315
Super-classes obo:ECO_0000110c
obo:ECO_0007316c

nuclease protection assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007316
Super-classes obo:ECO_0001106c
obo:ECO_0007818c
Sub-classes obo:ECO_0007315c
obo:ECO_0007523c

spatial pattern of transcript expression evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007317
Super-classes obo:ECO_0007303c
obo:ECO_0000047c

subtractive hybridization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007318
Super-classes obo:ECO_0007303c
obo:ECO_0000118c

author statement used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007319
Super-classes obo:ECO_0006156c
obo:ECO_0000204c
Sub-classes obo:ECO_0007320c
obo:ECO_0007321c
obo:ECO_0006217c

author statement without traceable support used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007320
Super-classes obo:ECO_0007319c
obo:ECO_0000034c

author statement supported by traceable reference used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007321
Super-classes obo:ECO_0007319c
obo:ECO_0000033c
Sub-classes obo:ECO_0007539c

curator inference used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007322
Super-classes obo:ECO_0007832c
obo:ECO_0000205c
Sub-classes obo:ECO_0007833c
obo:ECO_0007324c
obo:ECO_0007540c
obo:ECO_0007323c

inference from background scientific knowledge used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007323
Super-classes obo:ECO_0000001c
obo:ECO_0007322c

no evidence data found used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007324
Super-classes obo:ECO_0000035c
obo:ECO_0007322c

mutant phenotype evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007325
Super-classes obo:ECO_0000015c
obo:ECO_0007635c
Sub-classes obo:ECO_0007360c
obo:ECO_0007582c
obo:ECO_0007271c
obo:ECO_0007478c
obo:ECO_0007196c
obo:ECO_0007379c
obo:ECO_0007427c
obo:ECO_0007382c
obo:ECO_0007556c
obo:ECO_0007558c
obo:ECO_0007269c
obo:ECO_0007524c
obo:ECO_0007586c
obo:ECO_0007221c
obo:ECO_0007448c
obo:ECO_0007267c
obo:ECO_0007270c
obo:ECO_0007557c
obo:ECO_0007585c
obo:ECO_0007272c
obo:ECO_0007222c
obo:ECO_0007193c
obo:ECO_0007587c

genetic interaction evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007326
Super-classes obo:ECO_0000011c
obo:ECO_0007635c
Sub-classes obo:ECO_0007588c
obo:ECO_0007581c
obo:ECO_0007583c
obo:ECO_0007578c

genomic context evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007327
Super-classes obo:ECO_0000177c
obo:ECO_0000251c
Sub-classes obo:ECO_0007333c

biological aspect of ancestor evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007328
Super-classes obo:ECO_0000308c
obo:ECO_0007826c

biological aspect of descendant evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007329
Super-classes obo:ECO_0007826c
obo:ECO_0000214c

phylogenetic determination of loss of key residues evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007330
Super-classes obo:ECO_0007826c
obo:ECO_0000216c

rapid divergence from ancestral sequence evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007331
Super-classes obo:ECO_0007826c
obo:ECO_0000215c

physical interaction evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007332
Super-classes obo:ECO_0007307c
obo:ECO_0000021c
Sub-classes obo:ECO_0006330c
obo:ECO_0006328c
obo:ECO_0007469c
obo:ECO_0007384c
obo:ECO_0007474c
obo:ECO_0007567c
obo:ECO_0007364c
obo:ECO_0007570c
obo:ECO_0006304c
obo:ECO_0006294c
obo:ECO_0007385c
obo:ECO_0006278c
obo:ECO_0007429c
obo:ECO_0007510c
obo:ECO_0007428c

gene neighbors evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007333
Super-classes obo:ECO_0007327c
obo:ECO_0000084c

Edman degradation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007334
Super-classes obo:ECO_0007819c
obo:ECO_0001044c

3D cell culture evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007335
Super-classes obo:ECO_0007775c
obo:ECO_0001001c

51Cr release assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007336
Super-classes obo:ECO_0001004c
obo:ECO_0007781c

7-aminoactinomycin staining evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007337
Super-classes obo:ECO_0001005c
obo:ECO_0007798c

[3H]-thymidine incorporation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007338
Super-classes obo:ECO_0001003c
obo:ECO_0007776c

[3H]arachidonic acid release assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007339
Super-classes obo:ECO_0007773c
obo:ECO_0001002c

adhesion assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007340
Super-classes obo:ECO_0001006c
obo:ECO_0007773c

adoptive cell transfer evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007341
Super-classes obo:ECO_0007793c
obo:ECO_0001007c

alamarBlue assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007342
Super-classes obo:ECO_0007774c
obo:ECO_0001008c

allograft transplantation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007343
Super-classes obo:ECO_0001009c
obo:ECO_0007810c

anion-exchange chromatography evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007344
Super-classes obo:ECO_0007681c
obo:ECO_0001010c

annexin-V staining evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007345
Super-classes obo:ECO_0007777c
obo:ECO_0001011c

cognitive assay phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007346
Super-classes obo:ECO_0007635c
obo:ECO_0001012c

blocking monoclonal antibody evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007347
Super-classes obo:ECO_0007348c
obo:ECO_0001013c

immunological assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007348
Super-classes obo:ECO_0000040c
obo:ECO_0007384c
Sub-classes obo:ECO_0007602c
obo:ECO_0007350c
obo:ECO_0007349c
obo:ECO_0007347c
obo:ECO_0007596c
obo:ECO_0007603c
obo:ECO_0007391c

blocking peptide evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007349
Super-classes obo:ECO_0007348c
obo:ECO_0001014c

blocking polyclonal antibody evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007350
Super-classes obo:ECO_0001015c
obo:ECO_0007348c

blood test evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007351
Super-classes obo:ECO_0001016c
obo:ECO_0007307c

Boyden chamber assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007352
Super-classes obo:ECO_0001017c
obo:ECO_0007780c

bromodeoxyuridine incorporation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007353
Super-classes obo:ECO_0007354c
obo:ECO_0001018c

nucleotide analog incorporation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007354
Super-classes obo:ECO_0007776c
obo:ECO_0001107c
Sub-classes obo:ECO_0007353c

caspase assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007355
Super-classes obo:ECO_0007777c
obo:ECO_0001019c

cell counting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007356
Super-classes obo:ECO_0007773c
obo:ECO_0001020c

cell permeability assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007357
Super-classes obo:ECO_0007773c
obo:ECO_0001021c

carboxyfluorescein diacetate succinimidyl ester staining evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007358
Super-classes obo:ECO_0007798c
obo:ECO_0001022c

chemiluminescence-linked immunoassay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007359
Super-classes obo:ECO_0001023c
obo:ECO_0007819c

chimeric protein phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007360
Super-classes obo:ECO_0007325c
obo:ECO_0001024c

co-electrophoresis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007361
Super-classes obo:ECO_0007769c
obo:ECO_0001025c

co-localization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007362
Super-classes obo:ECO_0001026c
obo:ECO_0007363c

imaging assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007363
Super-classes obo:ECO_0000324c
obo:ECO_0007307c
Sub-classes obo:ECO_0007434c
obo:ECO_0007389c
obo:ECO_0007362c
obo:ECO_0007435c

co-sedimentation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007364
Super-classes obo:ECO_0007332c
obo:ECO_0001028c

colony counting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007365
Super-classes obo:ECO_0007307c
obo:ECO_0001027c

comet assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007366
Super-classes obo:ECO_0007769c
obo:ECO_0001029c

conditional knockin evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007367
Super-classes obo:ECO_0001031c
obo:ECO_0007368c

knockin evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007368
Super-classes obo:ECO_0007427c
obo:ECO_0001090c
Sub-classes obo:ECO_0007367c

conditional knockout evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007369
Super-classes obo:ECO_0007370c
obo:ECO_0001030c

knockout evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007370
Super-classes obo:ECO_0001091c
obo:ECO_0007427c
Sub-classes obo:ECO_0007369c
obo:ECO_0007525c

constitutively active mutant evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007371
Super-classes obo:ECO_0007635c
obo:ECO_0001032c

cross-linking evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007372
Super-classes obo:ECO_0001033c
obo:ECO_0007373c

protein binding evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007373
Super-classes obo:ECO_0007384c
obo:ECO_0000024c
Sub-classes obo:ECO_0007503c
obo:ECO_0007372c
obo:ECO_0007577c
obo:ECO_0006322c
obo:ECO_0007446c
obo:ECO_0007432c
obo:ECO_0007591c
obo:ECO_0007443c
obo:ECO_0007573c

crystallography evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007374
Super-classes obo:ECO_0007815c
obo:ECO_0001034c
Sub-classes obo:ECO_0005671c

cytochemistry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007375
Super-classes obo:ECO_0001035c
obo:ECO_0007376c
Sub-classes obo:ECO_0007466c

histochemistry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007376
Super-classes obo:ECO_0007389c
obo:ECO_0001050c
Sub-classes obo:ECO_0007375c

cytochrome C release assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007377
Super-classes obo:ECO_0007777c
obo:ECO_0001036c

4',6-diamidino-2-phenylindole staining evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007378
Super-classes obo:ECO_0007798c
obo:ECO_0001037c

deletion mutation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007379
Super-classes obo:ECO_0007325c
obo:ECO_0001038c

DNA laddering assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007380
Super-classes obo:ECO_0001039c
obo:ECO_0007777c

RNA dot blot assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007381
Super-classes obo:ECO_0001040c
obo:ECO_0007818c

dominant-negative mutant phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007382
Super-classes obo:ECO_0007325c
obo:ECO_0001042c

eTag assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007383
Super-classes obo:ECO_0007384c
obo:ECO_0001045c

affinity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007384
Super-classes obo:ECO_0007332c
obo:ECO_0000023c
Sub-classes obo:ECO_0007373c
obo:ECO_0007571c
obo:ECO_0007383c
obo:ECO_0007445c
obo:ECO_0007505c
obo:ECO_0005628c
obo:ECO_0006310c
obo:ECO_0007348c
obo:ECO_0007515c

filter binding assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007385
Super-classes obo:ECO_0001046c
obo:ECO_0007332c

fluorescence in situ hybridization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007386
Super-classes obo:ECO_0001837c
obo:ECO_0007809c
obo:ECO_0001047c

fluorescence resonance energy transfer evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007387
Super-classes obo:ECO_0001048c
obo:ECO_0006328c

gel-filtration evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007388
Super-classes obo:ECO_0001049c
obo:ECO_0007681c

histology evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007389
Super-classes obo:ECO_0001051c
obo:ECO_0007363c
Sub-classes obo:ECO_0007376c

immunocytochemistry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007390
Super-classes obo:ECO_0001053c
obo:ECO_0007819c

immunodepletion evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007391
Super-classes obo:ECO_0007348c
obo:ECO_0001054c

immunohistochemistry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007392
Super-classes obo:ECO_0001055c
obo:ECO_0007819c

in vitro acetylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007393
Super-classes obo:ECO_0007794c
obo:ECO_0001057c

in vitro cleavage assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007394
Super-classes obo:ECO_0001058c
obo:ECO_0007782c

in vitro deacetylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007395
Super-classes obo:ECO_0001060c
obo:ECO_0007771c

in vitro defarnesylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007396
Super-classes obo:ECO_0007790c
obo:ECO_0001061c

in vitro demethylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007397
Super-classes obo:ECO_0007795c
obo:ECO_0001062c

in vitro desumoylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007398
Super-classes obo:ECO_0001063c
obo:ECO_0007802c

in vitro deubiquitination assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007399
Super-classes obo:ECO_0007791c
obo:ECO_0001059c

in vitro farnesylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007400
Super-classes obo:ECO_0001064c
obo:ECO_0007800c

in vitro methylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007401
Super-classes obo:ECO_0007783c
obo:ECO_0001065c
Sub-classes obo:ECO_0007206c
obo:ECO_0007204c
obo:ECO_0007302c

in vitro palmitoylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007402
Super-classes obo:ECO_0001066c
obo:ECO_0007792c

in vitro phosphatase assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007403
Super-classes obo:ECO_0001067c
obo:ECO_0007772c

in vitro polyADP-ribosylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007404
Super-classes obo:ECO_0007797c
obo:ECO_0001069c

in vitro protein kinase assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007405
Super-classes obo:ECO_0001068c
obo:ECO_0007767c

in vitro sumoylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007406
Super-classes obo:ECO_0001070c
obo:ECO_0007788c

in vitro transcription assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007407
Super-classes obo:ECO_0001071c
obo:ECO_0007768c

in vitro translation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007408
Super-classes obo:ECO_0007799c
obo:ECO_0001072c

in vitro ubiquitination assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007409
Super-classes obo:ECO_0001073c
obo:ECO_0007801c

in vivo acetylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007410
Super-classes obo:ECO_0007794c
obo:ECO_0001074c

in vivo cleavage assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007411
Super-classes obo:ECO_0001075c
obo:ECO_0007782c

in vivo deacetylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007412
Super-classes obo:ECO_0007771c
obo:ECO_0001076c

in vivo defarnesylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007413
Super-classes obo:ECO_0001077c
obo:ECO_0007790c

in vivo demethylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007414
Super-classes obo:ECO_0001078c
obo:ECO_0007795c

in vivo desumoylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007415
Super-classes obo:ECO_0007802c
obo:ECO_0001080c

in vivo deubiquitination assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007416
Super-classes obo:ECO_0007791c
obo:ECO_0001079c

in vivo farnesylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007417
Super-classes obo:ECO_0007800c
obo:ECO_0001081c

in vivo methylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007418
Super-classes obo:ECO_0001082c
obo:ECO_0007783c

in vivo palmitoylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007419
Super-classes obo:ECO_0007792c
obo:ECO_0001083c

in vivo phosphatase assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007420
Super-classes obo:ECO_0007772c
obo:ECO_0001084c

in vivo protein kinase assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007421
Super-classes obo:ECO_0007767c
obo:ECO_0001085c

in vivo sumoylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007422
Super-classes obo:ECO_0001086c
obo:ECO_0007788c

in vivo transcription assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007423
Super-classes obo:ECO_0001087c
obo:ECO_0007768c

in vivo translation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007424
Super-classes obo:ECO_0001088c
obo:ECO_0007799c

in vivo ubiquitination assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007425
Super-classes obo:ECO_0007801c
obo:ECO_0001089c

induced mutation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007426

genetic transformation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007427
Super-classes obo:ECO_0005027c
obo:ECO_0007325c
Sub-classes obo:ECO_0007370c
obo:ECO_0007465c
obo:ECO_0007562c
obo:ECO_0007368c

lipid binding assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007428
Super-classes obo:ECO_0001092c
obo:ECO_0007332c

luminescence-based mammalian interactome mapping assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007429
Super-classes obo:ECO_0001093c
obo:ECO_0007332c

macroscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007430
Super-classes obo:ECO_0001094c
obo:ECO_0007297c

mammalian 2-hybrid assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007431
Super-classes obo:ECO_0007432c
obo:ECO_0001095c

bait-prey hybrid interaction evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007432
Super-classes obo:ECO_0000025c
obo:ECO_0007373c
Sub-classes obo:ECO_0007431c
obo:ECO_0007623c
obo:ECO_0007576c
obo:ECO_0007531c
obo:ECO_0007511c
obo:ECO_0007568c

mass spectrometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007433
Super-classes obo:ECO_0001096c
obo:ECO_0007821c
Sub-classes obo:ECO_0006284c
obo:ECO_0001581c
obo:ECO_0007464c
obo:ECO_0007489c
obo:ECO_0007454c
obo:ECO_0007288c
obo:ECO_0006237c
obo:ECO_0001587c

medical imaging evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007434
Super-classes obo:ECO_0007363c
obo:ECO_0001097c

microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007435
Super-classes obo:ECO_0001098c
obo:ECO_0007363c
Sub-classes obo:ECO_0007610c
obo:ECO_0007491c
obo:ECO_0007490c
obo:ECO_0007612c
obo:ECO_0007533c
obo:ECO_0007493c
obo:ECO_0006324c
obo:ECO_0007486c
obo:ECO_0007611c
obo:ECO_0007614c
obo:ECO_0007613c

motility wound healing assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007436
Super-classes obo:ECO_0001099c
obo:ECO_0007773c

MTS assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007437
Super-classes obo:ECO_0007777c
obo:ECO_0001100c

MTT assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007438
Super-classes obo:ECO_0001101c
obo:ECO_0007777c

multiplex bead-based immunoassay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007439
Super-classes obo:ECO_0007819c
obo:ECO_0001102c

natural variation mutant evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007440
Super-classes obo:ECO_0001103c
obo:ECO_0007635c
Sub-classes obo:ECO_0007295c

nuclear magnetic resonance evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007441
Super-classes obo:ECO_0006286c
obo:ECO_0001105c
Sub-classes obo:ECO_0006167c
obo:ECO_0006164c

nuclear fragmentation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007442
Super-classes obo:ECO_0007777c
obo:ECO_0001104c

phage display evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007443
Super-classes obo:ECO_0001108c
obo:ECO_0007373c

phosphoamino acid analysis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007444
Super-classes obo:ECO_0007307c
obo:ECO_0001109c

peptide affinity enrichment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007445
Super-classes obo:ECO_0001110c
obo:ECO_0007384c

peptide array evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007446
Super-classes obo:ECO_0007373c
obo:ECO_0001112c

physical examination evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007447
Super-classes obo:ECO_0007307c
obo:ECO_0001111c

point mutation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007448
Super-classes obo:ECO_0001113c
obo:ECO_0007325c
Sub-classes obo:ECO_0007265c
obo:ECO_0007266c
obo:ECO_0007264c

propidium iodide staining evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007449
Super-classes obo:ECO_0007798c
obo:ECO_0001114c

fluorescence evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007450
Super-classes obo:ECO_0007307c
obo:ECO_0001115c
Sub-classes obo:ECO_0006330c
obo:ECO_0006328c
obo:ECO_0006324c
obo:ECO_0007548c
obo:ECO_0007508c
obo:ECO_0007595c
obo:ECO_0007564c
obo:ECO_0007848c
obo:ECO_0006304c

protein dot blot assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007451
Super-classes obo:ECO_0001116c
obo:ECO_0007819c

protein microarray evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007452
Super-classes obo:ECO_0007819c
obo:ECO_0001117c

protein sequencing assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007453
Super-classes obo:ECO_0007812c
obo:ECO_0001118c

quantitative mass spectrometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007454
Super-classes obo:ECO_0001119c
obo:ECO_0007433c

radioisotope assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007455
Super-classes obo:ECO_0007307c
obo:ECO_0001120c
Sub-classes obo:ECO_0007845c

radioimmunoassay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007456
Super-classes obo:ECO_0001121c
obo:ECO_0007819c

restriction fragment detection evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007457
Super-classes obo:ECO_0001124c
obo:ECO_0007817c

spectrophotometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007458
Super-classes obo:ECO_0007821c
obo:ECO_0001126c
Sub-classes obo:ECO_0006300c
obo:ECO_0006229c

syngeneic transplantation experiment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007459
Super-classes obo:ECO_0007635c
obo:ECO_0001128c

xenotransplantation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007460
Super-classes obo:ECO_0007810c
obo:ECO_0001137c

WST-1 assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007461
Super-classes obo:ECO_0007775c
obo:ECO_0001136c

urine test evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007462
Super-classes obo:ECO_0007307c
obo:ECO_0001134c

terminal deoxynucleotidyl transferase dUTP nick end labeling assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007463
Super-classes obo:ECO_0007777c
obo:ECO_0001133c

tryptic phosphopeptide mapping assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007464
Super-classes obo:ECO_0007433c
obo:ECO_0001132c

transgenic organism evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007465
Super-classes obo:ECO_0007427c
obo:ECO_0001131c

tissue microarray evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007466
Super-classes obo:ECO_0001130c
obo:ECO_0007375c

TACE activity assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007467
Super-classes obo:ECO_0001129c
obo:ECO_0007468c

enzymatic activity assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007468
Super-classes obo:ECO_0007307c
obo:ECO_0000005c
Sub-classes obo:ECO_0007227c
obo:ECO_0007767c
obo:ECO_0007467c

surface plasmon resonance evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007469
Super-classes obo:ECO_0007332c
obo:ECO_0001127c

restriction landmark genomic scanning evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007470
Super-classes obo:ECO_0007817c
obo:ECO_0000089c

resonant mirror biosensor evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007471
Super-classes obo:ECO_0007307c
obo:ECO_0001123c

high-performance liquid chromatography evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007472
Super-classes obo:ECO_0001052c
obo:ECO_0007681c

ectopic expression evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007473
Super-classes obo:ECO_0000017c
obo:ECO_0007635c
Sub-classes obo:ECO_0007532c

electrophoretic mobility shift assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007474
Super-classes obo:ECO_0007332c
obo:ECO_0000096c

reverse transcription polymerase chain reaction evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007475
Super-classes obo:ECO_0000109c
obo:ECO_0007818c
Sub-classes obo:ECO_0001568c

in vivo polyADP-ribosylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007476
Super-classes obo:ECO_0005500c
obo:ECO_0007797c

DNA dot blot assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007477
Super-classes obo:ECO_0007817c
obo:ECO_0005522c

random mutagenesis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007478
Super-classes obo:ECO_0007325c
obo:ECO_0005529c
Sub-classes obo:ECO_0001843c

biological system reconstruction evidence by experimental evidence from single species used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007479
Super-classes obo:ECO_0007828c
obo:ECO_0005553c

biological system reconstruction evidence by experimental evidence from mixed species used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007480
Super-classes obo:ECO_0007828c
obo:ECO_0005552c

biological system reconstruction evidence based on orthology evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007481
Super-classes obo:ECO_0007482c
obo:ECO_0005545c

biological system reconstruction evidence based on homology evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007482
Super-classes obo:ECO_0005549c
obo:ECO_0007827c
Sub-classes obo:ECO_0007481c
obo:ECO_0007483c

biological system reconstruction evidence based on paralogy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007483
Super-classes obo:ECO_0007482c
obo:ECO_0005550c

biological system reconstruction evidence based on inference from background scientific knowledge used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007484
Super-classes obo:ECO_0007827c
obo:ECO_0005548c

immunogold labelling evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007485
Super-classes obo:ECO_0000090c
obo:ECO_0007486c
Sub-classes obo:ECO_0007492c

immunolocalization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007486
Super-classes obo:ECO_0007796c
obo:ECO_0000087c
obo:ECO_0007435c
Sub-classes obo:ECO_0007207c
obo:ECO_0007247c
obo:ECO_0007485c
obo:ECO_0007494c
obo:ECO_0007246c

flow cytometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007487
Super-classes obo:ECO_0000268c
obo:ECO_0007307c

enzyme-linked immunoabsorbent assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007488
Super-classes obo:ECO_0000267c
obo:ECO_0007819c

high throughput mass spectrometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007489
Super-classes obo:ECO_0007433c
obo:ECO_0005585c

confocal microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007490
Super-classes obo:ECO_0007435c
obo:ECO_0005587c
Sub-classes obo:ECO_0007496c
obo:ECO_0007616c
obo:ECO_0007615c

wide-field microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007491
Super-classes obo:ECO_0007435c
obo:ECO_0005588c
Sub-classes obo:ECO_0007561c

immunogold labelling electron microscopy assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007492
Super-classes obo:ECO_0007485c
obo:ECO_0005591c
obo:ECO_0007493c

electron microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007493
Super-classes obo:ECO_0007815c
obo:ECO_0005033c
obo:ECO_0007435c
Sub-classes obo:ECO_0007565c
obo:ECO_0006282c
obo:ECO_0007495c
obo:ECO_0007609c
obo:ECO_0007608c
obo:ECO_0006209c
obo:ECO_0007492c

immunoperoxidase immunolocalization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007494
Super-classes obo:ECO_0005594c
obo:ECO_0007486c
Sub-classes obo:ECO_0007495c

immunoperoxidase immunolocalization electron microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007495
Super-classes obo:ECO_0007493c
obo:ECO_0005596c
obo:ECO_0007494c

immunofluorescence confocal microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007496
Super-classes obo:ECO_0007490c
obo:ECO_0007497c
obo:ECO_0005600c

immunofluorescence evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007497
Super-classes obo:ECO_0007819c
obo:ECO_0000007c
Sub-classes obo:ECO_0007496c
obo:ECO_0007560c

two-dimensional polyacrylamide gel electrophoresis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007498
Super-classes obo:ECO_0005503c
obo:ECO_0007769c

alkaline phosphatase reporter gene assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007499
Super-classes obo:ECO_0007765c
obo:ECO_0001801c

beta-galactosidase reporter gene assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007500
Super-classes obo:ECO_0001802c
obo:ECO_0007765c

chloramphenicol acetyltransferase reporter gene assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007501
Super-classes obo:ECO_0007765c
obo:ECO_0001803c

chromatin immunoprecipitation-PCR evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007502
Super-classes obo:ECO_0007786c
obo:ECO_0000227c

immunoprecipitation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007503
Super-classes obo:ECO_0007373c
obo:ECO_0000085c
Sub-classes obo:ECO_0007786c
obo:ECO_0007546c

copper-phenanthroline footprinting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007504
Super-classes obo:ECO_0001815c
obo:ECO_0007505c

nucleic acid binding evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007505
Super-classes obo:ECO_0000136c
obo:ECO_0007384c
Sub-classes obo:ECO_0007575c
obo:ECO_0007507c
obo:ECO_0007574c
obo:ECO_0007514c
obo:ECO_0007519c
obo:ECO_0007517c
obo:ECO_0007526c
obo:ECO_0007504c
obo:ECO_0007577c
obo:ECO_0007536c
obo:ECO_0006322c
obo:ECO_0007572c

DNA affinity chromatography evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007506
Super-classes obo:ECO_0007681c
obo:ECO_0001809c

DNAse footprinting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007507
Super-classes obo:ECO_0007505c
obo:ECO_0001810c

fluorescence anisotropy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007508
Super-classes obo:ECO_0007450c
obo:ECO_0001811c

ferric uptake regulator titration assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007509
Super-classes obo:ECO_0001829c
obo:ECO_0007765c

systematic evolution of ligands by exponential amplification evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007510
Super-classes obo:ECO_0000293c
obo:ECO_0007332c
Sub-classes obo:ECO_0005635c

glutathione S-transferase pull-down assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007511
Super-classes obo:ECO_0001817c
obo:ECO_0007432c

beta-glucuronidase reporter gene assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007512
Super-classes obo:ECO_0001804c
obo:ECO_0007765c

heteronuclear single quantum coherence spectroscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007513
Super-classes obo:ECO_0001813c
obo:ECO_0006164c

hydroxyl-radical footprinting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007514
Super-classes obo:ECO_0007505c
obo:ECO_0001818c

isothermal titration calorimetry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007515
Super-classes obo:ECO_0001825c
obo:ECO_0007384c

luciferase reporter gene assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007516
Super-classes obo:ECO_0001805c
obo:ECO_0007765c

methidiumpropyl-ethylenediaminetetraacetic acid iron (II) footprinting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007517
Super-classes obo:ECO_0007505c
obo:ECO_0001814c

northern blot evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007518
Super-classes obo:ECO_0007303c
obo:ECO_0000106c

methylation interference footprinting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007519
Super-classes obo:ECO_0007505c
obo:ECO_0001827c

primer extension assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007520
Super-classes obo:ECO_0001819c
obo:ECO_0007303c

quantitative polymerase chain reaction evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007521
Super-classes obo:ECO_0000231c
obo:ECO_0007817c

rapid amplification of cDNA ends polymerase chain reaction evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007522
Super-classes obo:ECO_0001820c
obo:ECO_0007813c

S1 nuclease protection assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007523
Super-classes obo:ECO_0007316c
obo:ECO_0005521c

site-directed mutagenesis phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007524
Super-classes obo:ECO_0005528c
obo:ECO_0007325c

survival rate analysis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007525
Super-classes obo:ECO_0001822c
obo:ECO_0007370c

ultraviolet light footprinting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007526
Super-classes obo:ECO_0007505c
obo:ECO_0001826c

xylE reporter gene assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007527
Super-classes obo:ECO_0007765c
obo:ECO_0005537c

ad-hoc qualitative phenotype observation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007528
Super-classes obo:ECO_0007635c
obo:ECO_0005673c

ad-hoc quantitative phenotype observation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007529
Super-classes obo:ECO_0007635c
obo:ECO_0005675c

cell transfection experiment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007530
Super-classes obo:ECO_0005606c
obo:ECO_0007297c

yeast 2-hybrid evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007531
Super-classes obo:ECO_0000068c
obo:ECO_0007432c

Cya fusion reporter assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007532
Super-classes obo:ECO_0006001c
obo:ECO_0007765c
obo:ECO_0007473c

super-resolution microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007533
Super-classes obo:ECO_0005578c
obo:ECO_0007435c
Sub-classes obo:ECO_0007566c

fractionation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007534
Super-classes obo:ECO_0000100c
obo:ECO_0007307c
Sub-classes obo:ECO_0007208c
obo:ECO_0007787c
obo:ECO_0007552c

electrophysiology assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007535
Super-classes obo:ECO_0007307c
obo:ECO_0000164c
Sub-classes obo:ECO_0007537c
obo:ECO_0007766c
obo:ECO_0007550c
obo:ECO_0007278c
obo:ECO_0007276c
obo:ECO_0007275c
obo:ECO_0007283c
obo:ECO_0007553c
obo:ECO_0007277c

mRNA interactome capture evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007536
Super-classes obo:ECO_0006010c
obo:ECO_0007505c

patch-clamp recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007537
Super-classes obo:ECO_0006012c
obo:ECO_0007535c
Sub-classes obo:ECO_0007538c
obo:ECO_0007281c
obo:ECO_0007280c
obo:ECO_0007282c
obo:ECO_0007284c

whole-cell patch-clamp recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007538
Super-classes obo:ECO_0007537c
obo:ECO_0006014c

author statement from published clinical study used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007539
Super-classes obo:ECO_0006016c
obo:ECO_0007321c

inference based on individual clinical experience used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007540
Super-classes obo:ECO_0006018c
obo:ECO_0007322c

biofilm formation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007541
Super-classes obo:ECO_0007775c
obo:ECO_0006020c
Sub-classes obo:ECO_0007542c
obo:ECO_0007543c
obo:ECO_0007622c
obo:ECO_0007545c
obo:ECO_0007544c

microtiter plate biofilm assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007542
Super-classes obo:ECO_0007541c
obo:ECO_0006022c

air-liquid interface assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007543
Super-classes obo:ECO_0007541c
obo:ECO_0006024c

colony biofilm assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007544
Super-classes obo:ECO_0006026c
obo:ECO_0007541c

Kadouri drip-fed biofilm assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007545
Super-classes obo:ECO_0006028c
obo:ECO_0007541c

co-immunoprecipitation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007546
Super-classes obo:ECO_0000070c
obo:ECO_0007503c

optogenetic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007547
Super-classes obo:ECO_0006032c
obo:ECO_0007635c

fluorescent sensor evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007548
Super-classes obo:ECO_0007450c
obo:ECO_0006034c
Sub-classes obo:ECO_0007549c
obo:ECO_0007550c

genetically encoded fluorescent sensor evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007549
Super-classes obo:ECO_0007548c
obo:ECO_0006036c

genetically encoded fluorescent electrophysiology assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007550
Super-classes obo:ECO_0007535c
obo:ECO_0007548c
obo:ECO_0006038c
Sub-classes obo:ECO_0007551c

genetically encoded fluorescent ion concentration sensor assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007551
Super-classes obo:ECO_0007550c
obo:ECO_0006040c

cell fractionation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007552
Super-classes obo:ECO_0000004c
obo:ECO_0007534c

extracellular recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007553
Super-classes obo:ECO_0006043c
obo:ECO_0007535c
Sub-classes obo:ECO_0007554c
obo:ECO_0007555c

single-unit extracellular recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007554
Super-classes obo:ECO_0007553c
obo:ECO_0006045c

field potential recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007555
Super-classes obo:ECO_0006047c
obo:ECO_0007553c

anti-sense experiment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007556
Super-classes obo:ECO_0007325c
obo:ECO_0000018c
Sub-classes obo:ECO_0001584c

morpholino experiment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007557
Super-classes obo:ECO_0000292c
obo:ECO_0007325c

RNAi evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007558
Super-classes obo:ECO_0007325c
obo:ECO_0000019c

pharmacological assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007559
Super-classes obo:ECO_0007635c
obo:ECO_0006053c

immunofluorescence wide-field microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007560
Super-classes obo:ECO_0007561c
obo:ECO_0007497c
obo:ECO_0005599c

wide-field fluorescence microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007561
Super-classes obo:ECO_0007491c
obo:ECO_0005598c
Sub-classes obo:ECO_0007560c

over expression analysis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007562
Super-classes obo:ECO_0000120c
obo:ECO_0007427c

cell-free assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007563
Super-classes obo:ECO_0000183c
obo:ECO_0007307c

fluorescence recovery after photobleaching evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007564
Super-classes obo:ECO_0007450c
obo:ECO_0006066c

immuno-labelling electron microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007565
Super-classes obo:ECO_0007493c
obo:ECO_0006070c

immunofluorescence super resolution microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007566
Super-classes obo:ECO_0006072c
obo:ECO_0007533c

co-purification evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007567
Super-classes obo:ECO_0007332c
obo:ECO_0000022c

yeast one-hybrid evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007568
Super-classes obo:ECO_0000066c
obo:ECO_0007432c

split-ubiquitin functional complementation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007569
Super-classes obo:ECO_0000074c
obo:ECO_0006294c

far-Western blotting evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007570
Super-classes obo:ECO_0000076c
obo:ECO_0007332c

affinity chromatography evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007571
Super-classes obo:ECO_0007384c
obo:ECO_0000079c

ribohomopolymer binding assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007572
Super-classes obo:ECO_0000138c
obo:ECO_0007505c

protein:ion binding evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007573
Super-classes obo:ECO_0000142c
obo:ECO_0007373c

Southwestern blot evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007574
Super-classes obo:ECO_0007505c
obo:ECO_0000144c

Northwestern blot evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007575
Super-classes obo:ECO_0007505c
obo:ECO_0000146c

bacterial one-hybrid evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007576
Super-classes obo:ECO_0000294c
obo:ECO_0007432c

protein-oligonucleotide microarray binding evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007577
Super-classes obo:ECO_0007373c
obo:ECO_0001601c
obo:ECO_0007505c

functional complementation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007578
Super-classes obo:ECO_0000012c
obo:ECO_0007326c
Sub-classes obo:ECO_0007584c
obo:ECO_0007580c
obo:ECO_0007579c

transgenic rescue experiment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007579
Super-classes obo:ECO_0000013c
obo:ECO_0007578c

transient rescue experiment evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007580
Super-classes obo:ECO_0000038c
obo:ECO_0007578c

suppressor/enhancer interaction phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007581
Super-classes obo:ECO_0007326c
obo:ECO_0000052c

double mutant phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007582
Super-classes obo:ECO_0007325c
obo:ECO_0000054c

epistatic interaction phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007583
Super-classes obo:ECO_0007326c
obo:ECO_0000056c

functional complementation in heterologous system evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007584
Super-classes obo:ECO_0007578c
obo:ECO_0000064c

temperature-sensitive mutant phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007585
Super-classes obo:ECO_0006098c
obo:ECO_0007325c

recessive mutant phenotype evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007586
Super-classes obo:ECO_0007325c
obo:ECO_0006100c

high throughput mutant phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007587
Super-classes obo:ECO_0006057c
obo:ECO_0007000c
obo:ECO_0007325c

high throughput genetic interaction phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007588
Super-classes obo:ECO_0006057c
obo:ECO_0007002c
obo:ECO_0007326c

high throughput direct assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007589
Super-classes obo:ECO_0007004c
obo:ECO_0007307c
obo:ECO_0006057c

high throughput expression pattern evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007590
Super-classes obo:ECO_0006057c
obo:ECO_0007298c
obo:ECO_0007006c

radioligand binding assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007591
Super-classes obo:ECO_0007008c
obo:ECO_0007373c

combinatorial experimental and author inference evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007592
Super-classes obo:ECO_0007011c
obo:ECO_0000213c
Sub-classes obo:ECO_0006219c

combinatorial experimental and curator inference evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007593
Super-classes obo:ECO_0000213c
obo:ECO_0007012c

voltammetry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007594
Super-classes obo:ECO_0007015c
obo:ECO_0007805c

photoconversion evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007595
Super-classes obo:ECO_0007450c
obo:ECO_0007017c

agglutination test evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007596
Super-classes obo:ECO_0007348c
obo:ECO_0007019c
Sub-classes obo:ECO_0007599c
obo:ECO_0007600c
obo:ECO_0007598c
obo:ECO_0007597c
obo:ECO_0007601c

slide agglutination test evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007597
Super-classes obo:ECO_0007021c
obo:ECO_0007596c

direct Coombs test evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007598
Super-classes obo:ECO_0007023c
obo:ECO_0007596c

indirect Coombs test evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007599
Super-classes obo:ECO_0007596c
obo:ECO_0007025c

direct hemagglutination assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007600
Super-classes obo:ECO_0007596c
obo:ECO_0007027c

viral hemagglutination inhibition assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007601
Super-classes obo:ECO_0007029c
obo:ECO_0007596c

compement fixation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007602
Super-classes obo:ECO_0007348c
obo:ECO_0007031c

neutralization test assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007603
Super-classes obo:ECO_0007033c
obo:ECO_0007348c

copper transport assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007604
Super-classes obo:ECO_0007789c
obo:ECO_0007035c

5-cyano-2,3-ditolyl tetrazolium chloride staining evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007605
Super-classes obo:ECO_0007037c
obo:ECO_0007798c

plaque assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007606
Super-classes obo:ECO_0007039c
obo:ECO_0007778c

epifluorescence microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007607
Super-classes obo:ECO_0007041c
obo:ECO_0006324c

transmission electron microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007608
Super-classes obo:ECO_0007043c
obo:ECO_0007493c

scanning electron microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007609
Super-classes obo:ECO_0007045c
obo:ECO_0007493c

time-lapsed microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007610
Super-classes obo:ECO_0007435c
obo:ECO_0007047c

phase contrast microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007611
Super-classes obo:ECO_0007435c
obo:ECO_0007049c

transmitted light brightfied mircoscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007612
Super-classes obo:ECO_0007435c
obo:ECO_0007051c

koehler illumination microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007613
Super-classes obo:ECO_0007053c
obo:ECO_0007435c

differential interference contrast microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007614
Super-classes obo:ECO_0007435c
obo:ECO_0007055c

extended field laser confocal microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007615
Super-classes obo:ECO_0007057c
obo:ECO_0007490c

confocal laser scanning microscopy evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007616
Super-classes obo:ECO_0007059c
obo:ECO_0007490c

light scattering evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007617
Super-classes obo:ECO_0007061c
obo:ECO_0007815c
Sub-classes obo:ECO_0007619c
obo:ECO_0007618c
obo:ECO_0006211c

dynamic light scattering assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007618
Super-classes obo:ECO_0007063c
obo:ECO_0007617c

static light scattering assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007619
Super-classes obo:ECO_0007065c
obo:ECO_0007617c

colony papillation assay phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007620
Super-classes obo:ECO_0007067c
obo:ECO_0007625c

crystal violet staining evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007621
Super-classes obo:ECO_0007069c
obo:ECO_0007798c

flow cell biofilm assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007622
Super-classes obo:ECO_0007071c
obo:ECO_0007541c

bacterial 2-hybrid assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007623
Super-classes obo:ECO_0007432c
obo:ECO_0007073c

phenomic profiling assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007624
Super-classes obo:ECO_0007075c
obo:ECO_0007635c

colony morphology phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007625
Super-classes obo:ECO_0007635c
obo:ECO_0007077c
Sub-classes obo:ECO_0006246c
obo:ECO_0007620c
obo:ECO_0007626c
obo:ECO_0007627c

colony color phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007626
Super-classes obo:ECO_0007625c
obo:ECO_0007079c

colony size phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007627
Super-classes obo:ECO_0007081c
obo:ECO_0007625c
Sub-classes obo:ECO_0001572c

zone of inhibition evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007628
Super-classes obo:ECO_0007083c
obo:ECO_0007778c
Sub-classes obo:ECO_0007779c
obo:ECO_0007629c

Etest evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007629
Super-classes obo:ECO_0007085c
obo:ECO_0007628c

ribosome profiling evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007630
Super-classes obo:ECO_0007087c
obo:ECO_0007298c

computational inference used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007631
Super-classes obo:ECO_0007668c
obo:ECO_0007751c
obo:ECO_0000362c

transcriptional activation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007632
Super-classes obo:ECO_0000314c
obo:ECO_0000170c

transcriptional activation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007633
Super-classes obo:ECO_0000170c
obo:ECO_0007768c

experimental phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007634
Super-classes obo:ECO_0000269c
obo:ECO_0000059c
Sub-classes obo:ECO_0000316c
obo:ECO_0000315c
obo:ECO_0007095c
obo:ECO_0005674c
obo:ECO_0007728c
obo:ECO_0001146c
obo:ECO_0007076c
obo:ECO_0005676c
obo:ECO_0007164c
obo:ECO_0001169c
obo:ECO_0007138c
obo:ECO_0007141c
obo:ECO_0007093c
obo:ECO_0001259c
obo:ECO_0007078c
obo:ECO_0007137c
obo:ECO_0001237c
obo:ECO_0006054c
obo:ECO_0006033c
obo:ECO_0007136c
obo:ECO_0007116c
obo:ECO_0001149c
obo:ECO_0001260c
obo:ECO_0001273c
obo:ECO_0007730c

experimental phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007635
Super-classes obo:ECO_0007297c
obo:ECO_0000059c
Sub-classes obo:ECO_0007199c
obo:ECO_0007371c
obo:ECO_0007811c
obo:ECO_0007529c
obo:ECO_0007459c
obo:ECO_0007625c
obo:ECO_0007559c
obo:ECO_0007624c
obo:ECO_0007547c
obo:ECO_0007197c
obo:ECO_0007268c
obo:ECO_0007326c
obo:ECO_0007528c
obo:ECO_0007220c
obo:ECO_0007240c
obo:ECO_0007346c
obo:ECO_0007325c
obo:ECO_0007440c
obo:ECO_0007473c
obo:ECO_0007810c

curator inference from databasec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007636
Super-classes obo:ECO_0007647c
Sub-classes obo:ECO_0007759c

curator inference from encyclopediac # Classes

URI http://purl.obolibrary.org/obo/ECO_0007637
Super-classes obo:ECO_0007647c
Sub-classes obo:ECO_0007639c
obo:ECO_0007640c
obo:ECO_0007834c
obo:ECO_0007638c
obo:ECO_0007753c

curator inference from Wikipediac # Classes

URI http://purl.obolibrary.org/obo/ECO_0007638
Super-classes obo:ECO_0007637c
Sub-classes obo:ECO_0007754c
obo:ECO_0007835c

curator inference from Britannicac # Classes

URI http://purl.obolibrary.org/obo/ECO_0007639
Super-classes obo:ECO_0007637c
Sub-classes obo:ECO_0007836c
obo:ECO_0007756c

curator inference from MedlinePlus encyclopediac # Classes

URI http://purl.obolibrary.org/obo/ECO_0007640
Super-classes obo:ECO_0007637c
Sub-classes obo:ECO_0007755c
obo:ECO_0007837c

curator inference from dictionaryc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007641
Super-classes obo:ECO_0007647c
Sub-classes obo:ECO_0007839c
obo:ECO_0007642c
obo:ECO_0007760c
obo:ECO_0007643c
obo:ECO_0007644c

curator inference from Oxford Dictionaryc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007642
Super-classes obo:ECO_0007641c
Sub-classes obo:ECO_0007842c
obo:ECO_0007762c

curator inference from Merriam-Webster Dictionaryc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007643
Super-classes obo:ECO_0007641c
Sub-classes obo:ECO_0007763c
obo:ECO_0007841c

curator inference from MedlinePlus dictionaryc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007644
Super-classes obo:ECO_0007641c
Sub-classes obo:ECO_0007761c
obo:ECO_0007840c

curator inference from journal publicationc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007645
Super-classes obo:ECO_0007647c
Sub-classes obo:ECO_0007758c
obo:ECO_0007843c

curator inference from bookc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007646
Super-classes obo:ECO_0007647c
Sub-classes obo:ECO_0007838c
obo:ECO_0007757c

curator inference from authoritative sourcec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007647
Super-classes obo:ECO_0000205c
Sub-classes obo:ECO_0007645c
obo:ECO_0007641c
obo:ECO_0007646c
obo:ECO_0007637c
obo:ECO_0007752c
obo:ECO_0007636c
obo:ECO_0007833c

manually integrated combinatorial computational evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007648
Super-classes obo:ECO_0007677c
obo:ECO_0007674c
Sub-classes obo:ECO_0007650c
obo:ECO_0007649c

manually integrated combinatorial computational evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007649
Super-classes obo:ECO_0007678c
obo:ECO_0007675c
obo:ECO_0007648c

manually integrated combinatorial computational evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007650
Super-classes obo:ECO_0007679c
obo:ECO_0007648c
obo:ECO_0007676c

automatically integrated combinatorial computational evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007651
Super-classes obo:ECO_0007677c
obo:ECO_0007673c
Sub-classes obo:ECO_0007653c
obo:ECO_0007652c

automatically integrated combinatorial computational evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007652
Super-classes obo:ECO_0000245c
obo:ECO_0007678c
obo:ECO_0007651c

automatically integrated combinatorial computational evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007653
Super-classes obo:ECO_0000053c
obo:ECO_0007679c
obo:ECO_0007651c

combinatorial experimental evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007654
Super-classes obo:ECO_0000212c
Sub-classes obo:ECO_0007830c
obo:ECO_0007655c
obo:ECO_0007658c
obo:ECO_0007745c

manually integrated combinatorial experimental evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007655
Super-classes obo:ECO_0007654c
obo:ECO_0007674c
Sub-classes obo:ECO_0007657c
obo:ECO_0007656c

manually integrated combinatorial experimental evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007656
Super-classes obo:ECO_0007655c
obo:ECO_0007675c

manually integrated combinatorial experimental evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007657
Super-classes obo:ECO_0007655c
obo:ECO_0007830c
obo:ECO_0007676c

automatically integrated combinatorial experimental evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007658
Super-classes obo:ECO_0007654c
obo:ECO_0007673c
Sub-classes obo:ECO_0007660c
obo:ECO_0007659c

automatically integrated combinatorial experimental evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007659
Super-classes obo:ECO_0000245c
obo:ECO_0007658c

automatically integrated combinatorial experimental evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007660
Super-classes obo:ECO_0000053c
obo:ECO_0007658c
obo:ECO_0007830c

combinatorial computational and experimental evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007661
Super-classes obo:ECO_0000212c
Sub-classes obo:ECO_0007829c
obo:ECO_0007662c
obo:ECO_0007744c
obo:ECO_0007665c

manually integrated combinatorial computational and experimental evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007662
Super-classes obo:ECO_0007674c
obo:ECO_0007661c
Sub-classes obo:ECO_0007664c
obo:ECO_0007663c

manually integrated combinatorial computational and experimental evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007663
Super-classes obo:ECO_0007662c
obo:ECO_0007675c

manually integrated combinatorial computational and experimental evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007664
Super-classes obo:ECO_0007829c
obo:ECO_0007662c
obo:ECO_0007676c

automatically integrated combinatorial computational and experimental evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007665
Super-classes obo:ECO_0007673c
obo:ECO_0007661c
Sub-classes obo:ECO_0007667c
obo:ECO_0007666c

automatically integrated combinatorial computational and experimental evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007666
Super-classes obo:ECO_0000245c
obo:ECO_0007665c

automatically integrated combinatorial computational and experimental evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007667
Super-classes obo:ECO_0007665c
obo:ECO_0007829c
obo:ECO_0000053c

computational evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007668
Super-classes obo:ECO_0000352c
obo:ECO_0007672c
Sub-classes obo:ECO_0007631c
obo:ECO_0000250c

computational evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007669
Super-classes obo:ECO_0007672c
obo:ECO_0000501c
Sub-classes obo:ECO_0000363c
obo:ECO_0000249c

computational evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007672
Super-classes obo:ECO_0000000c
Sub-classes obo:ECO_0007669c
obo:ECO_0007668c
obo:ECO_0006138c
obo:ECO_0006135c
obo:ECO_0000362c
obo:ECO_0000044c
obo:ECO_0006141c

automatically integrated combinatorial evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007673
Super-classes obo:ECO_0000212c
Sub-classes obo:ECO_0000053c
obo:ECO_0007651c
obo:ECO_0000245c
obo:ECO_0007658c
obo:ECO_0007665c

manually integrated combinatorial evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007674
Super-classes obo:ECO_0000212c
Sub-classes obo:ECO_0007662c
obo:ECO_0007676c
obo:ECO_0007655c
obo:ECO_0007675c
obo:ECO_0007648c

manually integrated combinatorial evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007675
Super-classes obo:ECO_0000244c
obo:ECO_0007674c
Sub-classes obo:ECO_0007649c
obo:ECO_0007656c
obo:ECO_0007663c

manually integrated combinatorial evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007676
Super-classes obo:ECO_0000213c
obo:ECO_0007674c
Sub-classes obo:ECO_0007664c
obo:ECO_0007650c
obo:ECO_0007657c

combinatorial computational evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007677
Super-classes obo:ECO_0000212c
Sub-classes obo:ECO_0007651c
obo:ECO_0007678c
obo:ECO_0007648c
obo:ECO_0007679c

combinatorial computational evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007678
Super-classes obo:ECO_0000244c
obo:ECO_0007677c
Sub-classes obo:ECO_0007649c
obo:ECO_0007652c

combinatorial computational evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007679
Super-classes obo:ECO_0007677c
obo:ECO_0000213c
Sub-classes obo:ECO_0007650c
obo:ECO_0007653c

chromatography evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007680
Super-classes obo:ECO_0000269c
obo:ECO_0000325c
Sub-classes obo:ECO_0001147c
obo:ECO_0001184c
obo:ECO_0001272c
obo:ECO_0005629c
obo:ECO_0007110c

chromatography evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007681
Super-classes obo:ECO_0007297c
obo:ECO_0000325c
Sub-classes obo:ECO_0007506c
obo:ECO_0007344c
obo:ECO_0007388c
obo:ECO_0007214c
obo:ECO_0007472c

reporter gene assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007682
Super-classes obo:ECO_0000049c
obo:ECO_0000270c

protein separation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007684
Super-classes obo:ECO_0000156c
obo:ECO_0006005c

substance quantification evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007685
Super-classes obo:ECO_0000335c
obo:ECO_0000314c

voltage clamp recording evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007686
Super-classes obo:ECO_0006006c
obo:ECO_0005576c

protein kinase assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007687
Super-classes obo:ECO_0001558c
obo:ECO_0005801c

gel electrophoresis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007688
Super-classes obo:ECO_0000314c
obo:ECO_0000337c

sodium dodecyl sulfate polyacrylamide gel electrophoresis evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007689
Super-classes obo:ECO_0000314c
obo:ECO_0000333c

ex vivo assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007690
Super-classes obo:ECO_0005502c
obo:ECO_0000314c

cleavage assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007691
Super-classes obo:ECO_0001547c
obo:ECO_0000314c

deacetylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007692
Super-classes obo:ECO_0000314c
obo:ECO_0001548c

transcription assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007693
Super-classes obo:ECO_0000168c
obo:ECO_0000314c

phosphatase assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007694
Super-classes obo:ECO_0001556c
obo:ECO_0000314c

cell-based assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007695
Super-classes obo:ECO_0001565c
obo:ECO_0000314c

cell proliferation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007696
Super-classes obo:ECO_0000314c
obo:ECO_0005007c

DNA synthesis cell proliferation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007697
Super-classes obo:ECO_0005008c
obo:ECO_0000314c

apoptotic assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007698
Super-classes obo:ECO_0000314c
obo:ECO_0005034c

cell growth assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007699
Super-classes obo:ECO_0001563c
obo:ECO_0000314c

disk diffusion test evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007700
Super-classes obo:ECO_0005605c
obo:ECO_0007084c

chemotaxis assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007701
Super-classes obo:ECO_0005021c
obo:ECO_0000314c

cytotoxicity assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007702
Super-classes obo:ECO_0000314c
obo:ECO_0005012c

cell viability assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007703
Super-classes obo:ECO_0000314c
obo:ECO_0005004c

methylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007704
Super-classes obo:ECO_0000314c
obo:ECO_0001554c

protein assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007705

chromatin immunoprecipitation evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007706
Super-classes obo:ECO_0000226c
obo:ECO_0005644c

protein inhibition evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007707
Super-classes obo:ECO_0000020c
obo:ECO_0000314c
Sub-classes obo:ECO_0007151c
obo:ECO_0007123c

sumoylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007708
Super-classes obo:ECO_0001559c
obo:ECO_0000314c

transport assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007709
Super-classes obo:ECO_0000134c
obo:ECO_0000314c

defarnesylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007710
Super-classes obo:ECO_0001549c
obo:ECO_0000314c

deubiquitination assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007711
Super-classes obo:ECO_0001552c
obo:ECO_0000314c

palmitoylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007712
Super-classes obo:ECO_0001555c
obo:ECO_0000314c

acetylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007713
Super-classes obo:ECO_0000314c
obo:ECO_0001546c

demethylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007714
Super-classes obo:ECO_0000314c
obo:ECO_0001550c

polyADP-ribosylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007715
Super-classes obo:ECO_0000314c
obo:ECO_0001557c

staining evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007716
Super-classes obo:ECO_0000314c
obo:ECO_0005019c

translation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007717
Super-classes obo:ECO_0000314c
obo:ECO_0001561c

ubiquitination assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007718
Super-classes obo:ECO_0000314c
obo:ECO_0001562c

immunodetection assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007719
Super-classes obo:ECO_0005593c
obo:ECO_0000314c

desumoylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007720
Super-classes obo:ECO_0000314c
obo:ECO_0001551c

farnesylation assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007721
Super-classes obo:ECO_0001553c
obo:ECO_0000314c

reconstitution assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007722
Super-classes obo:ECO_0000003c
obo:ECO_0000314c

in vitro transcription reconstitution assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007723
Super-classes obo:ECO_0000150c
obo:ECO_0000314c

localization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007724
Super-classes obo:ECO_0001533c
obo:ECO_0000314c

protein localization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007725
Super-classes obo:ECO_0000122c
obo:ECO_0000314c

fusion protein localization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007726
Super-classes obo:ECO_0000124c
obo:ECO_0000314c

nucleic acid localization evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007727
Super-classes obo:ECO_0001534c
obo:ECO_0000314c

anatomical perturbation phenotypic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007728
Super-classes obo:ECO_0007634c
obo:ECO_0000240c

cleavage arrested development evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007730
Super-classes obo:ECO_0000298c
obo:ECO_0007634c

spectrometry evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007731
Super-classes obo:ECO_0000269c
obo:ECO_0005504c

sequencing assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007732
Super-classes obo:ECO_0000220c
obo:ECO_0000269c

nucleotide sequencing assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007733
Super-classes obo:ECO_0000269c
obo:ECO_0000219c

high throughput nucleotide sequencing assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007734
Super-classes obo:ECO_0000269c
obo:ECO_0000221c

structure determination evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007735
Super-classes obo:ECO_0000269c
obo:ECO_0005031c

molecule detection assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007736
Super-classes obo:ECO_0000269c
obo:ECO_0005516c

DNA detection assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007737
Super-classes obo:ECO_0000269c
obo:ECO_0005519c

protein detection assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007738
Super-classes obo:ECO_0000269c
obo:ECO_0005517c

RNA detection assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007739
Super-classes obo:ECO_0005518c
obo:ECO_0000269c

small molecule detection assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007740
Super-classes obo:ECO_0001522c
obo:ECO_0000269c

chromosome conformation-based evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007741
Super-classes obo:ECO_0000232c
obo:ECO_0000269c

3C evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007742
Super-classes obo:ECO_0000269c
obo:ECO_0000233c

combinatorial computational and experimental evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007744
Super-classes obo:ECO_0007661c
obo:ECO_0000244c

combinatorial experimental evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007745
Super-classes obo:ECO_0000244c
obo:ECO_0007654c

biological system reconstruction evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007746
Super-classes obo:ECO_0000088c
obo:ECO_0000352c

biological system reconstruction evidence by experimental evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007747
Super-classes obo:ECO_0005551c
obo:ECO_0000352c

phenotypic similarity evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007748
Super-classes obo:ECO_0000252c
obo:ECO_0000057c

transcript splice pattern evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007749
Super-classes obo:ECO_0000247c
obo:ECO_0000326c

phylogenetic evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007750
Super-classes obo:ECO_0000080c
obo:ECO_0000252c

inferential evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007751
Super-classes obo:ECO_0000352c
obo:ECO_0000361c
Sub-classes obo:ECO_0000305c
obo:ECO_0007631c
obo:ECO_0001828c
obo:ECO_0006216c

curator inference from authoritative source used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007752
Super-classes obo:ECO_0000305c
obo:ECO_0007647c
Sub-classes obo:ECO_0007759c
obo:ECO_0007757c
obo:ECO_0007753c
obo:ECO_0007760c
obo:ECO_0007758c

curator inference from encyclopedia used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007753
Super-classes obo:ECO_0007752c
obo:ECO_0007637c
Sub-classes obo:ECO_0007755c
obo:ECO_0007756c
obo:ECO_0007754c

curator inference from Wikipedia used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007754
Super-classes obo:ECO_0007638c
obo:ECO_0007753c

curator inference from MedlinePlus encyclopedia used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007755
Super-classes obo:ECO_0007753c
obo:ECO_0007640c

curator inference from Britannica used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007756
Super-classes obo:ECO_0007753c
obo:ECO_0007639c

curator inference from book used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007757
Super-classes obo:ECO_0007752c
obo:ECO_0007646c

curator inference from journal publication used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007758
Super-classes obo:ECO_0007645c
obo:ECO_0007752c

curator inference from database used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007759
Super-classes obo:ECO_0007752c
obo:ECO_0007636c

curator inference from dictionary used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007760
Super-classes obo:ECO_0007641c
obo:ECO_0007752c
Sub-classes obo:ECO_0007761c
obo:ECO_0007762c
obo:ECO_0007763c

curator inference from MedlinePlus dictionary used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007761
Super-classes obo:ECO_0007760c
obo:ECO_0007644c

curator inference from Oxford Dictionary used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007762
Super-classes obo:ECO_0007760c
obo:ECO_0007642c

curator inference from Merriam-Webster Dictionary used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007763
Super-classes obo:ECO_0007760c
obo:ECO_0007643c

reporter gene assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007765
Super-classes obo:ECO_0007298c
obo:ECO_0000049c
Sub-classes obo:ECO_0007527c
obo:ECO_0007501c
obo:ECO_0007516c
obo:ECO_0007532c
obo:ECO_0006242c
obo:ECO_0007500c
obo:ECO_0007512c
obo:ECO_0007509c
obo:ECO_0007499c
obo:ECO_0005637c

voltage clamp recording evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007766
Super-classes obo:ECO_0005576c
obo:ECO_0007535c
Sub-classes obo:ECO_0007279c
obo:ECO_0007219c
obo:ECO_0007286c
obo:ECO_0007285c
obo:ECO_0007274c

protein kinase assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007767
Super-classes obo:ECO_0007468c
obo:ECO_0001558c
Sub-classes obo:ECO_0007273c
obo:ECO_0007421c
obo:ECO_0007405c

transcription assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007768
Super-classes obo:ECO_0000168c
obo:ECO_0007307c
Sub-classes obo:ECO_0007407c
obo:ECO_0007633c
obo:ECO_0007423c

gel electrophoresis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007769
Super-classes obo:ECO_0000337c
obo:ECO_0007307c
Sub-classes obo:ECO_0007366c
obo:ECO_0006306c
obo:ECO_0007498c
obo:ECO_0007253c
obo:ECO_0007770c
obo:ECO_0007252c
obo:ECO_0007361c

sodium dodecyl sulfate polyacrylamide gel electrophoresis evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007770
Super-classes obo:ECO_0007769c
obo:ECO_0000333c
Sub-classes obo:ECO_0007306c

deacetylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007771
Super-classes obo:ECO_0007307c
obo:ECO_0001548c
Sub-classes obo:ECO_0007412c
obo:ECO_0007395c

phosphatase assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007772
Super-classes obo:ECO_0007307c
obo:ECO_0001556c
Sub-classes obo:ECO_0007420c
obo:ECO_0007403c

cell-based assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007773
Super-classes obo:ECO_0001565c
obo:ECO_0007307c
Sub-classes obo:ECO_0007356c
obo:ECO_0007339c
obo:ECO_0007775c
obo:ECO_0007357c
obo:ECO_0007774c
obo:ECO_0007780c
obo:ECO_0007778c
obo:ECO_0007340c
obo:ECO_0007777c
obo:ECO_0007261c
obo:ECO_0007436c
obo:ECO_0007781c
obo:ECO_0006320c

cell viability assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007774
Super-classes obo:ECO_0007773c
obo:ECO_0005004c
Sub-classes obo:ECO_0007342c
obo:ECO_0007263c

cell proliferation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007775
Super-classes obo:ECO_0007773c
obo:ECO_0005007c
Sub-classes obo:ECO_0007776c
obo:ECO_0007461c
obo:ECO_0007251c
obo:ECO_0007335c
obo:ECO_0007289c
obo:ECO_0007541c

DNA synthesis cell proliferation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007776
Super-classes obo:ECO_0007775c
obo:ECO_0005008c
Sub-classes obo:ECO_0007338c
obo:ECO_0007354c

apoptotic assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007777
Super-classes obo:ECO_0007773c
obo:ECO_0005034c
Sub-classes obo:ECO_0007442c
obo:ECO_0007380c
obo:ECO_0007345c
obo:ECO_0007463c
obo:ECO_0007377c
obo:ECO_0007437c
obo:ECO_0007355c
obo:ECO_0007438c

cell growth assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007778
Super-classes obo:ECO_0007773c
obo:ECO_0001563c
Sub-classes obo:ECO_0005639c
obo:ECO_0007606c
obo:ECO_0007628c

disk diffusion test evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007779
Super-classes obo:ECO_0007628c
obo:ECO_0005605c

chemotaxis assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007780
Super-classes obo:ECO_0007773c
obo:ECO_0005021c
Sub-classes obo:ECO_0007292c
obo:ECO_0007291c
obo:ECO_0007352c
obo:ECO_0007290c

cytotoxicity assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007781
Super-classes obo:ECO_0007773c
obo:ECO_0005012c
Sub-classes obo:ECO_0007336c

cleavage assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007782
Super-classes obo:ECO_0001547c
obo:ECO_0007307c
Sub-classes obo:ECO_0007411c
obo:ECO_0007394c

methylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007783
Super-classes obo:ECO_0007307c
obo:ECO_0001554c
Sub-classes obo:ECO_0007401c
obo:ECO_0007418c

protein assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007784

protein inhibition evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007785
Super-classes obo:ECO_0007307c
obo:ECO_0000020c
Sub-classes obo:ECO_0007227c
obo:ECO_0007255c

chromatin immunoprecipitation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007786
Super-classes obo:ECO_0000226c
obo:ECO_0007503c
Sub-classes obo:ECO_0007233c
obo:ECO_0005619c
obo:ECO_0005621c
obo:ECO_0007502c
obo:ECO_0005618c

protein separation evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007787
Super-classes obo:ECO_0007534c
obo:ECO_0000156c
Sub-classes obo:ECO_0007217c
obo:ECO_0007216c

sumoylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007788
Super-classes obo:ECO_0007307c
obo:ECO_0001559c
Sub-classes obo:ECO_0007406c
obo:ECO_0007422c

transport assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007789
Super-classes obo:ECO_0007307c
obo:ECO_0000134c
Sub-classes obo:ECO_0007604c
obo:ECO_0007218c

defarnesylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007790
Super-classes obo:ECO_0007307c
obo:ECO_0001549c
Sub-classes obo:ECO_0007396c
obo:ECO_0007413c

deubiquitination assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007791
Super-classes obo:ECO_0001552c
obo:ECO_0007307c
Sub-classes obo:ECO_0007399c
obo:ECO_0007416c

palmitoylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007792
Super-classes obo:ECO_0001555c
obo:ECO_0007307c
Sub-classes obo:ECO_0007419c
obo:ECO_0007402c

ex vivo assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007793
Super-classes obo:ECO_0005502c
obo:ECO_0007307c
Sub-classes obo:ECO_0007341c

acetylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007794
Super-classes obo:ECO_0001546c
obo:ECO_0007307c
Sub-classes obo:ECO_0007393c
obo:ECO_0007410c

demethylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007795
Super-classes obo:ECO_0007307c
obo:ECO_0001550c
Sub-classes obo:ECO_0007397c
obo:ECO_0007414c

immunodetection assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007796
Super-classes obo:ECO_0005593c
obo:ECO_0007307c
Sub-classes obo:ECO_0006235c
obo:ECO_0007486c
obo:ECO_0007306c

polyADP-ribosylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007797
Super-classes obo:ECO_0007307c
obo:ECO_0001557c
Sub-classes obo:ECO_0007404c
obo:ECO_0007476c

staining evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007798
Super-classes obo:ECO_0005019c
obo:ECO_0007307c
Sub-classes obo:ECO_0007358c
obo:ECO_0007378c
obo:ECO_0007449c
obo:ECO_0007605c
obo:ECO_0007621c
obo:ECO_0007337c

translation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007799
Super-classes obo:ECO_0001561c
obo:ECO_0007307c
Sub-classes obo:ECO_0007408c
obo:ECO_0007424c

farnesylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007800
Super-classes obo:ECO_0001553c
obo:ECO_0007307c
Sub-classes obo:ECO_0007417c
obo:ECO_0007400c

ubiquitination assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007801
Super-classes obo:ECO_0007307c
obo:ECO_0001562c
Sub-classes obo:ECO_0007425c
obo:ECO_0007409c

desumoylation assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007802
Super-classes obo:ECO_0001551c
obo:ECO_0007307c
Sub-classes obo:ECO_0007415c
obo:ECO_0007398c

reconstitution assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007803
Super-classes obo:ECO_0007307c
obo:ECO_0000003c
Sub-classes obo:ECO_0007804c

in vitro transcription reconstitution assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007804
Super-classes obo:ECO_0007803c
obo:ECO_0000150c
Sub-classes obo:ECO_0007215c

substance quantification evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007805
Super-classes obo:ECO_0000335c
obo:ECO_0007307c
Sub-classes obo:ECO_0007594c

localization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007806
Super-classes obo:ECO_0007307c
obo:ECO_0001533c
Sub-classes obo:ECO_0007807c
obo:ECO_0007809c

protein localization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007807
Super-classes obo:ECO_0000122c
obo:ECO_0007806c
Sub-classes obo:ECO_0007808c

fusion protein localization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007808
Super-classes obo:ECO_0007807c
obo:ECO_0000124c
Sub-classes obo:ECO_0007212c
obo:ECO_0007213c
obo:ECO_0007211c
obo:ECO_0007210c

nucleic acid localization evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007809
Super-classes obo:ECO_0007806c
obo:ECO_0001534c
Sub-classes obo:ECO_0007386c

anatomical perturbation phenotypic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007810
Super-classes obo:ECO_0000240c
obo:ECO_0007635c
Sub-classes obo:ECO_0007460c
obo:ECO_0007241c
obo:ECO_0007242c
obo:ECO_0007343c

cleavage arrested development evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007811
Super-classes obo:ECO_0007635c
obo:ECO_0000298c
Sub-classes obo:ECO_0007245c

sequencing assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007812
Super-classes obo:ECO_0000220c
obo:ECO_0007297c
Sub-classes obo:ECO_0007813c
obo:ECO_0007453c

nucleotide sequencing assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007813
Super-classes obo:ECO_0000219c
obo:ECO_0007812c
Sub-classes obo:ECO_0007232c
obo:ECO_0001599c
obo:ECO_0007814c
obo:ECO_0007522c

high throughput nucleotide sequencing assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007814
Super-classes obo:ECO_0007813c
obo:ECO_0000221c
Sub-classes obo:ECO_0007231c
obo:ECO_0007229c
obo:ECO_0007230c

structure determination evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007815
Super-classes obo:ECO_0007297c
obo:ECO_0005031c
Sub-classes obo:ECO_0007374c
obo:ECO_0006235c
obo:ECO_0007493c
obo:ECO_0006201c
obo:ECO_0007617c
obo:ECO_0006300c
obo:ECO_0006312c
obo:ECO_0006213c

molecule detection assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007816
Super-classes obo:ECO_0005516c
obo:ECO_0007297c
Sub-classes obo:ECO_0007820c
obo:ECO_0005646c
obo:ECO_0007817c
obo:ECO_0006276c
obo:ECO_0007819c
obo:ECO_0007818c

DNA detection assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007817
Super-classes obo:ECO_0007816c
obo:ECO_0005519c
Sub-classes obo:ECO_0007470c
obo:ECO_0007521c
obo:ECO_0007457c
obo:ECO_0007305c
obo:ECO_0007477c
obo:ECO_0007205c

RNA detection assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007818
Super-classes obo:ECO_0005518c
obo:ECO_0007816c
Sub-classes obo:ECO_0007316c
obo:ECO_0007381c
obo:ECO_0007475c

protein detection assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007819
Super-classes obo:ECO_0005517c
obo:ECO_0007816c
Sub-classes obo:ECO_0007497c
obo:ECO_0007439c
obo:ECO_0007452c
obo:ECO_0007334c
obo:ECO_0005651c
obo:ECO_0007451c
obo:ECO_0007456c
obo:ECO_0007359c
obo:ECO_0007488c
obo:ECO_0007390c
obo:ECO_0007392c

small molecule detection assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007820
Super-classes obo:ECO_0001522c
obo:ECO_0007816c

spectrometry evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007821
Super-classes obo:ECO_0007297c
obo:ECO_0005504c
Sub-classes obo:ECO_0007458c
obo:ECO_0006201c
obo:ECO_0007433c

chromosome conformation-based evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007822
Super-classes obo:ECO_0007297c
obo:ECO_0000232c
Sub-classes obo:ECO_0007234c
obo:ECO_0007235c
obo:ECO_0007823c
obo:ECO_0007239c
obo:ECO_0007238c

3C evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007823
Super-classes obo:ECO_0007822c
obo:ECO_0000233c
Sub-classes obo:ECO_0007237c

phenotypic similarity evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007824
Super-classes obo:ECO_0000251c
obo:ECO_0000057c
Sub-classes obo:ECO_0007200c
obo:ECO_0007203c
obo:ECO_0007194c
obo:ECO_0007202c
obo:ECO_0007198c
obo:ECO_0007201c

transcript splice pattern evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007825
Super-classes obo:ECO_0000248c
obo:ECO_0000326c
Sub-classes obo:ECO_0000332c
obo:ECO_0000331c

phylogenetic evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007826
Super-classes obo:ECO_0000080c
obo:ECO_0000251c
Sub-classes obo:ECO_0007330c
obo:ECO_0007329c
obo:ECO_0007331c
obo:ECO_0007257c
obo:ECO_0007328c

biological system reconstruction evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007827
Super-classes obo:ECO_0000088c
obo:ECO_0000501c
Sub-classes obo:ECO_0007484c
obo:ECO_0007482c
obo:ECO_0007828c

biological system reconstruction evidence by experimental evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007828
Super-classes obo:ECO_0007827c
obo:ECO_0005551c
Sub-classes obo:ECO_0007479c
obo:ECO_0007480c

combinatorial computational and experimental evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007829
Super-classes obo:ECO_0000213c
obo:ECO_0007661c
Sub-classes obo:ECO_0007664c
obo:ECO_0007667c

combinatorial experimental evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007830
Super-classes obo:ECO_0007654c
obo:ECO_0000213c
Sub-classes obo:ECO_0007657c
obo:ECO_0007660c

inferential evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007832
Super-classes obo:ECO_0000501c
obo:ECO_0000361c
Sub-classes obo:ECO_0007322c
obo:ECO_0006217c
obo:ECO_0000363c

curator inference from authoritative source used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007833
Super-classes obo:ECO_0007322c
obo:ECO_0007647c
Sub-classes obo:ECO_0007834c
obo:ECO_0007838c
obo:ECO_0007843c
obo:ECO_0007839c

curator inference from encyclopedia used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007834
Super-classes obo:ECO_0007833c
obo:ECO_0007637c
Sub-classes obo:ECO_0007836c
obo:ECO_0007835c
obo:ECO_0007837c

curator inference from Wikipedia used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007835
Super-classes obo:ECO_0007638c
obo:ECO_0007834c

curator inference from Britannica used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007836
Super-classes obo:ECO_0007834c
obo:ECO_0007639c

curator inference from MedlinePlus encyclopedia used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007837
Super-classes obo:ECO_0007834c
obo:ECO_0007640c

curator inference from book used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007838
Super-classes obo:ECO_0007833c
obo:ECO_0007646c

curator inference from dictionary used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007839
Super-classes obo:ECO_0007641c
obo:ECO_0007833c
Sub-classes obo:ECO_0007842c
obo:ECO_0007840c
obo:ECO_0007841c

curator inference from MedlinePlus dictionary used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007840
Super-classes obo:ECO_0007839c
obo:ECO_0007644c

curator inference from Merriam-Webster Dictionary used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007841
Super-classes obo:ECO_0007643c
obo:ECO_0007839c

curator inference from Oxford Dictionary used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007842
Super-classes obo:ECO_0007839c
obo:ECO_0007642c

curator inference from journal publication used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007843
Super-classes obo:ECO_0007833c
obo:ECO_0007645c

radioisotope quantification assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007844
Super-classes obo:ECO_0001120c
Sub-classes obo:ECO_0007846c
obo:ECO_0007845c

radioisotope quantification assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007845
Super-classes obo:ECO_0007455c
obo:ECO_0007844c

radioisotope quantification assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007846
Super-classes obo:ECO_0007844c
obo:ECO_0001254c

fluorescence quantification assay evidencec # Classes

URI http://purl.obolibrary.org/obo/ECO_0007847
Super-classes obo:ECO_0001115c
Sub-classes obo:ECO_0007848c
obo:ECO_0007849c

fluorescence quantification assay evidence used in automatic assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007848
Super-classes obo:ECO_0007450c
obo:ECO_0007847c

fluorescence quantification assay evidence used in manual assertionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007849
Super-classes obo:ECO_0001249c
obo:ECO_0007847c

inference of sequence features from visual inspectionc # Classes

URI http://purl.obolibrary.org/obo/ECO_0007850
Description

This type of inference may be made by either a curator or an author.

Super-classes obo:ECO_0000361c
Sub-classes obo:ECO_0001828c

DNA catabolic process, endonucleolyticc # Classes

URI http://purl.obolibrary.org/obo/GO_0000737
Super-classes obo:GO_0090305c
obo:GO_0006308c
Restrictions obo:BFO_0000051op some obo:GO_0004520c
Sub-classes obo:GO_0006309c

chromatinc # Classes

URI http://purl.obolibrary.org/obo/GO_0000785
Super-classes obo:GO_0005575c

core promoter bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0001047
Super-classes obo:GO_0044212c
obo:OBI_0001588c

regulatory region nucleic acid bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0001067
Super-classes obo:GO_0003676c
Sub-classes obo:GO_0044212c

transcription, RNA-templatedc # Classes

URI http://purl.obolibrary.org/obo/GO_0001172
Super-classes obo:GO_0009987c

action potentialc # Classes

URI http://purl.obolibrary.org/obo/GO_0001508
Super-classes obo:GO_0042391c

regulation of cell growthc # Classes

URI http://purl.obolibrary.org/obo/GO_0001558
Super-classes obo:GO_0051128c
obo:GO_0040008c
Restrictions obo:RO_0002211op some obo:GO_0016049c
Sub-classes obo:GO_0030308c
obo:GO_0030307c

cytokine productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0001816
Super-classes obo:GO_0032501c
Sub-classes obo:GO_0071706c

regulation of cytokine productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0001817
Super-classes obo:GO_0051239c
Restrictions obo:RO_0002211op some obo:GO_0001816c
Sub-classes obo:GO_0050707c
obo:GO_0001818c
obo:GO_0001819c
obo:GO_1903555c

negative regulation of cytokine productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0001818
Super-classes obo:GO_0051241c
obo:GO_0001817c
Restrictions obo:RO_0002212op some obo:GO_0001816c
Sub-classes obo:GO_1903556c
obo:GO_0050710c

positive regulation of cytokine productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0001819
Super-classes obo:GO_0051240c
obo:GO_0001817c
Restrictions obo:RO_0002213op some obo:GO_0001816c
Sub-classes obo:GO_1903557c
obo:GO_0050715c

nucleoside bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0001882
Super-classes obo:GO_1901363c
obo:GO_0097367c
obo:GO_0097159c
obo:GO_0036094c
Sub-classes obo:GO_0032549c

cell killingc # Classes

URI http://purl.obolibrary.org/obo/GO_0001906
Super-classes obo:GO_0008150c

peptide secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0002790
Super-classes obo:GO_0046903c
obo:GO_0015833c
Sub-classes obo:GO_0009306c

regulation of peptide secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0002791
Super-classes obo:GO_0051046c
obo:GO_0090087c
Restrictions obo:RO_0002211op some obo:GO_0002790c
Sub-classes obo:GO_0002793c
obo:GO_0002792c
obo:GO_0050708c

negative regulation of peptide secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0002792
Super-classes obo:GO_0051048c
obo:GO_0002791c
Restrictions obo:RO_0002212op some obo:GO_0002790c
Sub-classes obo:GO_0050709c

positive regulation of peptide secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0002793
Super-classes obo:GO_0002791c
obo:GO_0051047c
Restrictions obo:RO_0002213op some obo:GO_0002790c
Sub-classes obo:GO_0050714c

regulation of response to biotic stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0002831
Super-classes obo:GO_0048583c
Restrictions obo:RO_0002211op some obo:GO_0009607c
Sub-classes obo:GO_0002832c
obo:GO_0002833c

negative regulation of response to biotic stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0002832
Super-classes obo:GO_0048585c
obo:GO_0002831c
Restrictions obo:RO_0002212op some obo:GO_0009607c

positive regulation of response to biotic stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0002833
Super-classes obo:GO_0048584c
obo:GO_0002831c
Restrictions obo:RO_0002213op some obo:GO_0009607c

GO:molecular_functionc # Classes

URI http://purl.obolibrary.org/obo/GO_0003674
Super-classes obo:BFO_0000015c
Sub-classes obo:GO_0005215c
obo:GO_0045182c
obo:GO_0003824c
obo:GO_0005488c

nucleic acid bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0003676
Super-classes obo:GO_0097159c
obo:GO_1901363c
Sub-classes obo:GO_0003677c
obo:GO_0001067c

DNA bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0003677
Super-classes obo:GO_0003676c
Sub-classes obo:GO_0043565c
obo:GO_0044212c

antigen bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0003823
Super-classes obo:GO_0005488c
Sub-classes obo:GO_0042605c

catalytic activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0003824
Super-classes obo:GO_0003674c
Sub-classes obo:GO_0034061c
obo:GO_0016787c
obo:GO_0140097c
obo:GO_0003964c

RNA-directed DNA polymerase activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0003964
Super-classes obo:GO_0003824c

nuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0004518
Super-classes obo:GO_0016788c
Restrictions obo:BFO_0000050op some obo:GO_0090305c
Sub-classes obo:GO_0004519c
obo:GO_0004536c

endonuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0004519
Super-classes obo:GO_0004518c
Sub-classes obo:GO_0004520c

endodeoxyribonuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0004520
Super-classes obo:GO_0004519c
obo:GO_0004536c

deoxyribonuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0004536
Super-classes obo:GO_0140097c
obo:GO_0004518c
Restrictions obo:BFO_0000050op some obo:GO_0006259c
Sub-classes obo:GO_0004520c

transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0005215
Super-classes obo:GO_0003674c
Sub-classes obo:GO_0022857c

ion channel activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0005216
Super-classes obo:GO_0015075c
obo:GO_0009987c
obo:GO_0015267c
obo:GO_0015318c

bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0005488
Super-classes obo:GO_0003674c
Sub-classes obo:GO_0008289c
obo:GO_0005515c
obo:GO_0097367c
obo:GO_1901363c
obo:GO_0036094c
obo:GO_0097159c
obo:GO_0003823c
obo:GO_0033218c

protein bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0005515
Super-classes obo:GO_0005488c
Sub-classes obo:GO_0019904c

cellular_componentc # Classes

URI http://purl.obolibrary.org/obo/GO_0005575
Super-classes obo:BFO_0000040c
Sub-classes obo:GO_0097458c
obo:GO_0032991c
obo:GO_0005622c
obo:GO_0005694c
obo:GO_0000785c

intracellularc # Classes

URI http://purl.obolibrary.org/obo/GO_0005622
Super-classes obo:GO_0005575c

chromosomec # Classes

URI http://purl.obolibrary.org/obo/GO_0005694
Super-classes obo:GO_0005575c

nucleobase-containing compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0006139
Super-classes obo:GO_0044238c
obo:GO_1901360c
obo:GO_0034641c
obo:GO_0046483c
obo:GO_0006725c
Sub-classes obo:GO_0034655c
obo:GO_0034654c
obo:GO_0090304c

DNA metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0006259
Super-classes obo:GO_0090304c
obo:GO_0044260c
Sub-classes obo:GO_0071897c
obo:GO_0006304c
obo:GO_0006308c

DNA replicationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006260
Super-classes obo:GO_0034645c
Restrictions obo:BFO_0000051op some obo:GO_0071897c

regulation of DNA replicationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006275
Super-classes obo:GO_2000112c
Restrictions obo:RO_0002211op some obo:GO_0006260c
Sub-classes obo:GO_0045740c
obo:GO_0008156c

plasmid maintenancec # Classes

URI http://purl.obolibrary.org/obo/GO_0006276
Super-classes obo:GO_0009987c

DNA modificationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006304
Super-classes obo:GO_0043412c
obo:GO_0006259c
Sub-classes obo:GO_0044728c
obo:GO_0006305c

DNA alkylationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006305
Super-classes obo:GO_0006304c
Sub-classes obo:GO_0006306c

DNA methylationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006306
Super-classes obo:GO_0044728c
obo:GO_0006305c
obo:GO_0043414c

DNA catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0006308
Super-classes obo:GO_0044265c
obo:GO_0034655c
obo:GO_0006259c
Restrictions obo:BFO_0000051op some obo:GO_0004536c
Sub-classes obo:GO_0000737c

apoptotic DNA fragmentationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006309
Super-classes obo:GO_0000737c
Restrictions obo:BFO_0000050op some obo:GO_0030262c

transcription, DNA-templatedc # Classes

URI http://purl.obolibrary.org/obo/GO_0006351
Super-classes obo:GO_0034645c
obo:GO_0097659c
Restrictions obo:BFO_0000050op some obo:GO_0010467c
Sub-classes obo:GO_0009300c

regulation of transcription, DNA-templatedc # Classes

URI http://purl.obolibrary.org/obo/GO_0006355
Super-classes obo:GO_1903506c
obo:GO_2000112c
obo:GO_0010468c
Restrictions obo:RO_0002211op some obo:GO_0006351c
Sub-classes obo:GO_0045892c
obo:GO_0045893c
obo:GO_0060194c

translationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006412
Super-classes obo:GO_0043043c
obo:GO_0044267c
obo:GO_0034645c
Restrictions obo:BFO_0000050op some obo:GO_0010467c
obo:BFO_0000051op some obo:GO_0006414c

translational elongationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006414
Super-classes obo:GO_0034645c
Restrictions obo:BFO_0000050op some obo:GO_0006412c

regulation of translationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006417
Super-classes obo:GO_0032268c
obo:GO_2000112c
obo:GO_0034248c
obo:GO_0010608c
Restrictions obo:RO_0002211op some obo:GO_0006412c
Sub-classes obo:GO_0045727c
obo:GO_0006448c
obo:GO_0043143c
obo:GO_0045974c
obo:GO_0017148c

regulation of translational elongationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006448
Super-classes obo:GO_0006417c
Restrictions obo:RO_0002211op some obo:GO_0006414c
Sub-classes obo:GO_0045900c
obo:GO_0045901c

peptide metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0006518
Super-classes obo:GO_0043603c
obo:GO_1901564c
Sub-classes obo:GO_0043043c

cellular aromatic compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0006725
Super-classes obo:GO_0044237c
Sub-classes obo:GO_0019439c
obo:GO_0019438c
obo:GO_0006139c

nitrogen compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0006807
Super-classes obo:GO_0008152c
Sub-classes obo:GO_0034641c
obo:GO_1901564c

transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0006810
Super-classes obo:GO_0051234c
Sub-classes obo:GO_0071705c
obo:GO_0071702c
obo:GO_0046903c
obo:GO_0006811c
obo:GO_0140352c
obo:GO_0055085c

ion transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0006811
Super-classes obo:GO_0006810c
Sub-classes obo:GO_0006820c
obo:GO_0034220c

anion transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0006820
Super-classes obo:GO_0006811c
Sub-classes obo:GO_0015711c

lipid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0006869
Super-classes obo:GO_0071702c
Restrictions obo:BFO_0000050op some obo:GO_0010876c
Sub-classes obo:GO_0015908c

apoptotic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0006915
Super-classes obo:GO_0012501c
Sub-classes obo:GO_1902742c

cellular component disassembly involved in execution phase of apoptosisc # Classes

URI http://purl.obolibrary.org/obo/GO_0006921
Super-classes obo:GO_0022411c
Restrictions obo:BFO_0000050op some obo:GO_0097194c
Sub-classes obo:GO_0030262c

movement of cell or subcellular componentc # Classes

URI http://purl.obolibrary.org/obo/GO_0006928
Super-classes obo:GO_0009987c
Sub-classes obo:GO_0048870c

chemotaxisc # Classes

URI http://purl.obolibrary.org/obo/GO_0006935
Super-classes obo:GO_0042330c
Restrictions obo:BFO_0000050op some obo:GO_0042221c
Sub-classes obo:GO_0060326c

response to stressc # Classes

URI http://purl.obolibrary.org/obo/GO_0006950
Super-classes obo:GO_0050896c
Sub-classes obo:GO_0009611c
obo:GO_0033554c

cellular response to DNA damage stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0006974
Super-classes obo:GO_0033554c

organelle organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006996
Super-classes obo:GO_0016043c
Sub-classes obo:GO_0051276c
obo:GO_0006997c

nucleus organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0006997
Super-classes obo:GO_0006996c
Sub-classes obo:GO_0007000c

nucleolus organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0007000
Super-classes obo:GO_0006997c
Sub-classes obo:GO_0007576c

agingc # Classes

URI http://purl.obolibrary.org/obo/GO_0007568
Super-classes obo:GO_0032502c
Sub-classes obo:GO_0007569c

cell agingc # Classes

URI http://purl.obolibrary.org/obo/GO_0007569
Super-classes obo:GO_0048869c
obo:GO_0007568c

nucleolar fragmentationc # Classes

URI http://purl.obolibrary.org/obo/GO_0007576
Super-classes obo:GO_0007000c
Restrictions obo:BFO_0000050op some obo:GO_0007569c

protein localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0008104
Super-classes obo:GO_0033036c
Sub-classes obo:GO_0034613c
obo:GO_0045184c
obo:GO_0071692c

biological_processc # Classes

URI http://purl.obolibrary.org/obo/GO_0008150
Super-classes obo:BFO_0000015c
Sub-classes obo:GO_0071840c
obo:GO_0032502c
obo:GO_0008283c
obo:GO_0001906c
obo:GO_0040007c
obo:GO_0009987c
obo:GO_0051179c
obo:OBI_0001588c
obo:GO_0030097c
obo:GO_0050896c
obo:OBI_1110122c
obo:GO_0040030c
obo:OBI_1110014c
obo:GO_0051704c
obo:GO_0008152c
obo:GO_0032501c
obo:GO_0030041c
obo:GO_0065007c
obo:GO_0040011c

metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0008152
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0071704c
obo:GO_0009056c
obo:GO_0006807c
obo:GO_0044237c
obo:GO_0009058c
obo:GO_0032259c
obo:GO_0044238c

negative regulation of DNA replicationc # Classes

URI http://purl.obolibrary.org/obo/GO_0008156
Super-classes obo:GO_2000113c
obo:GO_0006275c
Restrictions obo:RO_0002212op some obo:GO_0006260c

cell deathc # Classes

URI http://purl.obolibrary.org/obo/GO_0008219
Super-classes obo:GO_0009987c
Sub-classes obo:GO_0012501c

cell population proliferationc # Classes

URI http://purl.obolibrary.org/obo/GO_0008283
Super-classes obo:GO_0008150c

positive regulation of cell population proliferationc # Classes

URI http://purl.obolibrary.org/obo/GO_0008284
Super-classes obo:GO_0048522c
obo:GO_0042127c
Restrictions obo:RO_0002213op some obo:GO_0008283c

negative regulation of cell population proliferationc # Classes

URI http://purl.obolibrary.org/obo/GO_0008285
Super-classes obo:GO_0042127c
obo:GO_0048523c
Restrictions obo:RO_0002212op some obo:GO_0008283c

lipid bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0008289
Super-classes obo:GO_0005488c

catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009056
Super-classes obo:GO_0008152c
Sub-classes obo:GO_1901575c
obo:GO_0044248c

macromolecule catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009057
Super-classes obo:GO_1901575c
obo:GO_0043170c
Sub-classes obo:GO_0044265c

biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009058
Super-classes obo:GO_0008152c
Sub-classes obo:GO_1901576c
obo:GO_0044249c

macromolecule biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009059
Super-classes obo:GO_0043170c
obo:GO_1901576c
Sub-classes obo:GO_0034645c
obo:GO_0032774c

antisense RNA transcriptionc # Classes

URI http://purl.obolibrary.org/obo/GO_0009300
Super-classes obo:GO_0042868c
obo:GO_0006351c

protein secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0009306
Super-classes obo:GO_0032940c
obo:GO_0035592c
obo:GO_0002790c
obo:GO_0015031c
Sub-classes obo:GO_0050663c

response to external stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0009605
Super-classes obo:GO_0050896c

response to biotic stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0009607
Super-classes obo:GO_0050896c

response to woundingc # Classes

URI http://purl.obolibrary.org/obo/GO_0009611
Super-classes obo:GO_0006950c
Sub-classes obo:GO_0042060c

response to toxic substancec # Classes

URI http://purl.obolibrary.org/obo/GO_0009636
Super-classes obo:GO_0042221c
Sub-classes obo:GO_0097237c
obo:GO_0010046c

anatomical structure morphogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_0009653
Super-classes obo:GO_0032502c
Restrictions obo:BFO_0000050op some obo:GO_0048856c
Sub-classes obo:GO_0032989c

response to endogenous stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0009719
Super-classes obo:GO_0050896c
Sub-classes obo:GO_0071495c

regulation of biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009889
Super-classes obo:GO_0019222c
Restrictions obo:RO_0002211op some obo:GO_0009058c
Sub-classes obo:GO_0031326c
obo:GO_0010556c
obo:GO_0009890c
obo:GO_0009891c

negative regulation of biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009890
Super-classes obo:GO_0009889c
obo:GO_0009892c
Restrictions obo:RO_0002212op some obo:GO_0009058c
Sub-classes obo:GO_0031327c
obo:GO_0010558c

positive regulation of biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009891
Super-classes obo:GO_0009889c
obo:GO_0009893c
Restrictions obo:RO_0002213op some obo:GO_0009058c
Sub-classes obo:GO_0031328c
obo:GO_0010557c

negative regulation of metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009892
Super-classes obo:GO_0019222c
obo:GO_0048519c
Restrictions obo:RO_0002212op some obo:GO_0008152c
Sub-classes obo:GO_0010605c
obo:GO_0031324c
obo:GO_0009895c
obo:GO_0009890c
obo:GO_0051172c

positive regulation of metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009893
Super-classes obo:GO_0048518c
obo:GO_0019222c
Restrictions obo:RO_0002213op some obo:GO_0008152c
Sub-classes obo:GO_0031325c
obo:GO_0010604c
obo:GO_0051173c
obo:GO_0009896c
obo:GO_0009891c

regulation of catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009894
Super-classes obo:GO_0019222c
Restrictions obo:RO_0002211op some obo:GO_0009056c
Sub-classes obo:GO_0031329c
obo:GO_0009896c
obo:GO_0009895c

negative regulation of catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009895
Super-classes obo:GO_0009892c
obo:GO_0009894c
Restrictions obo:RO_0002212op some obo:GO_0009056c
Sub-classes obo:GO_0031330c

positive regulation of catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009896
Super-classes obo:GO_0009894c
obo:GO_0009893c
Restrictions obo:RO_0002213op some obo:GO_0009056c
Sub-classes obo:GO_0031331c

cellular processc # Classes

URI http://purl.obolibrary.org/obo/GO_0009987
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0044237c
obo:GO_0008219c
obo:GO_0005216c
obo:GO_0016049c
obo:GO_0006928c
obo:GO_0016458c
obo:GO_0097194c
obo:GO_0044764c
obo:GO_0060352c
obo:GO_0048869c
obo:GO_0051716c
obo:GO_0016043c
obo:GO_0001172c
obo:GO_0006276c
obo:GO_0140352c

response to organic substancec # Classes

URI http://purl.obolibrary.org/obo/GO_0010033
Super-classes obo:GO_0042221c
Sub-classes obo:GO_0010243c
obo:GO_0071310c
obo:GO_0014070c

response to mycotoxinc # Classes

URI http://purl.obolibrary.org/obo/GO_0010046
Super-classes obo:GO_0009636c
Sub-classes obo:GO_1901328c
obo:GO_0036146c

response to organonitrogen compoundc # Classes

URI http://purl.obolibrary.org/obo/GO_0010243
Super-classes obo:GO_0010033c
obo:GO_1901698c
Sub-classes obo:GO_1901328c
obo:GO_0071417c

gene expressionc # Classes

URI http://purl.obolibrary.org/obo/GO_0010467
Super-classes obo:GO_0043170c

regulation of gene expressionc # Classes

URI http://purl.obolibrary.org/obo/GO_0010468
Super-classes obo:GO_0060255c
Restrictions obo:RO_0002211op some obo:GO_0010467c
Sub-classes obo:GO_0010608c
obo:GO_0040029c
obo:GO_0060968c
obo:GO_0010628c
obo:GO_0006355c
obo:GO_0010629c

regulation of macromolecule biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0010556
Super-classes obo:GO_0060255c
obo:GO_0009889c
Restrictions obo:RO_0002211op some obo:GO_0009059c
Sub-classes obo:GO_0010557c
obo:GO_2001141c
obo:GO_0010558c
obo:GO_2000112c

positive regulation of macromolecule biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0010557
Super-classes obo:GO_0010556c
obo:GO_0010604c
obo:GO_0009891c
Restrictions obo:RO_0002213op some obo:GO_0009059c
Sub-classes obo:GO_0045727c
obo:GO_0045740c
obo:GO_1902680c
obo:GO_2000573c

negative regulation of macromolecule biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0010558
Super-classes obo:GO_0010605c
obo:GO_0010556c
obo:GO_0009890c
Restrictions obo:RO_0002212op some obo:GO_0009059c
Sub-classes obo:GO_2000113c
obo:GO_1902679c

positive regulation of macromolecule metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0010604
Super-classes obo:GO_0009893c
obo:GO_0060255c
Restrictions obo:RO_0002213op some obo:GO_0043170c
Sub-classes obo:GO_0032075c
obo:GO_0010628c
obo:GO_0051247c
obo:GO_0010557c
obo:GO_0051054c
obo:GO_0051254c

negative regulation of macromolecule metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0010605
Super-classes obo:GO_0009892c
obo:GO_0060255c
Restrictions obo:RO_0002212op some obo:GO_0043170c
Sub-classes obo:GO_0010558c
obo:GO_0051253c
obo:GO_0032074c
obo:GO_0010629c
obo:GO_0051053c
obo:GO_0051248c

posttranscriptional regulation of gene expressionc # Classes

URI http://purl.obolibrary.org/obo/GO_0010608
Super-classes obo:GO_0010468c
Sub-classes obo:GO_0016441c
obo:GO_0006417c

positive regulation of gene expressionc # Classes

URI http://purl.obolibrary.org/obo/GO_0010628
Super-classes obo:GO_0010604c
obo:GO_0010468c
Restrictions obo:RO_0002213op some obo:GO_0010467c
Sub-classes obo:GO_0045727c
obo:GO_0060969c
obo:GO_0045893c

negative regulation of gene expressionc # Classes

URI http://purl.obolibrary.org/obo/GO_0010629
Super-classes obo:GO_0010605c
obo:GO_0010468c
Restrictions obo:RO_0002212op some obo:GO_0010467c
Sub-classes obo:GO_0016458c
obo:GO_0045892c
obo:GO_0017148c

positive regulation of organelle organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0010638
Super-classes obo:GO_0033043c
obo:GO_0051130c
Restrictions obo:RO_0002213op some obo:GO_0006996c
Sub-classes obo:GO_2001252c

negative regulation of organelle organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0010639
Super-classes obo:GO_0051129c
obo:GO_0033043c
Restrictions obo:RO_0002212op some obo:GO_0006996c
Sub-classes obo:GO_2001251c

lipid localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0010876
Super-classes obo:GO_0033036c

cellular component assembly involved in morphogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_0010927
Super-classes obo:GO_0022607c
obo:GO_0048646c
Restrictions obo:BFO_0000050op some obo:GO_0032989c

regulation of cell deathc # Classes

URI http://purl.obolibrary.org/obo/GO_0010941
Super-classes obo:GO_0050794c
Restrictions obo:RO_0002211op some obo:GO_0008219c
Sub-classes obo:GO_0060548c
obo:GO_0043067c
obo:GO_0010942c

positive regulation of cell deathc # Classes

URI http://purl.obolibrary.org/obo/GO_0010942
Super-classes obo:GO_0048522c
obo:GO_0010941c
Restrictions obo:RO_0002213op some obo:GO_0008219c
Sub-classes obo:GO_0043068c

programmed cell deathc # Classes

URI http://purl.obolibrary.org/obo/GO_0012501
Super-classes obo:GO_0008219c
Sub-classes obo:GO_0006915c

response to organic cyclic compoundc # Classes

URI http://purl.obolibrary.org/obo/GO_0014070
Super-classes obo:GO_0010033c
Sub-classes obo:GO_1901328c
obo:GO_0071407c

protein transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0015031
Super-classes obo:GO_0045184c
obo:GO_0015833c
Sub-classes obo:GO_0009306c

ion transmembrane transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0015075
Super-classes obo:GO_0022857c
Restrictions obo:BFO_0000050op some obo:GO_0034220c
Sub-classes obo:GO_0005216c

channel activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0015267
Super-classes obo:GO_0022803c
Sub-classes obo:GO_0005216c

inorganic molecular entity transmembrane transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0015318
Super-classes obo:GO_0022857c
Sub-classes obo:GO_0005216c

organic anion transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0015711
Super-classes obo:GO_0006820c
obo:GO_0071702c
Sub-classes obo:GO_0046942c

monocarboxylic acid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0015718
Super-classes obo:GO_0046942c
Sub-classes obo:GO_0015908c

peptide transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0015833
Super-classes obo:GO_0071702c
obo:GO_0042886c
Sub-classes obo:GO_0015031c
obo:GO_0002790c

organic acid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0015849
Super-classes obo:GO_0071702c
Sub-classes obo:GO_0046942c

fatty acid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0015908
Super-classes obo:GO_0006869c
obo:GO_0015718c
Sub-classes obo:GO_0015909c

long-chain fatty acid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0015909
Super-classes obo:GO_0015908c
Sub-classes obo:GO_1903963c

cellular component organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0016043
Super-classes obo:GO_0071840c
obo:GO_0009987c
Sub-classes obo:GO_0022411c
obo:GO_0022607c
obo:GO_0030030c
obo:GO_0032989c
obo:GO_0006996c

cell growthc # Classes

URI http://purl.obolibrary.org/obo/GO_0016049
Super-classes obo:GO_0040007c
obo:GO_0009987c

RNA metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0016070
Super-classes obo:GO_0090304c
Sub-classes obo:GO_0032774c
obo:GO_0034660c

RNA interferencec # Classes

URI http://purl.obolibrary.org/obo/GO_0016246
Super-classes obo:GO_0035194c

posttranscriptional gene silencingc # Classes

URI http://purl.obolibrary.org/obo/GO_0016441
Super-classes obo:GO_0040029c
obo:GO_0010608c
obo:GO_0016458c
Sub-classes obo:GO_0035194c

gene silencingc # Classes

URI http://purl.obolibrary.org/obo/GO_0016458
Super-classes obo:GO_0010629c
obo:GO_0009987c
Sub-classes obo:GO_0031047c
obo:GO_0016441c

cell migrationc # Classes

URI http://purl.obolibrary.org/obo/GO_0016477
Super-classes obo:GO_0048870c
Sub-classes obo:GO_0060326c

hydrolase activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0016787
Super-classes obo:GO_0003824c
Sub-classes obo:GO_0016788c

hydrolase activity, acting on ester bondsc # Classes

URI http://purl.obolibrary.org/obo/GO_0016788
Super-classes obo:GO_0016787c
Sub-classes obo:GO_0004518c

negative regulation of translationc # Classes

URI http://purl.obolibrary.org/obo/GO_0017148
Super-classes obo:GO_2000113c
obo:GO_0006417c
obo:GO_0032269c
obo:GO_0034249c
obo:GO_0010629c
Restrictions obo:RO_0002212op some obo:GO_0006412c
Sub-classes obo:GO_0045900c
obo:GO_0040033c

heterocycle biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0018130
Super-classes obo:GO_0044249c
obo:GO_0046483c
Sub-classes obo:GO_0034654c

regulation of nucleobase-containing compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0019219
Super-classes obo:GO_0031323c
obo:GO_0051171c
obo:GO_0080090c
Restrictions obo:RO_0002211op some obo:GO_0006139c
Sub-classes obo:GO_0045935c
obo:GO_0051252c
obo:GO_0051052c
obo:GO_0045934c
obo:GO_0032069c

regulation of metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0019222
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002211op some obo:GO_0008152c
Sub-classes obo:GO_0009889c
obo:GO_0080090c
obo:GO_0051171c
obo:GO_0060255c
obo:GO_0009892c
obo:GO_0031323c
obo:GO_0009894c
obo:GO_0009893c

aromatic compound biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0019438
Super-classes obo:GO_0006725c
obo:GO_0044249c
Sub-classes obo:GO_0034654c

aromatic compound catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0019439
Super-classes obo:GO_0006725c
obo:GO_0044248c
Sub-classes obo:GO_0034655c

protein metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0019538
Super-classes obo:GO_0044238c
obo:GO_1901564c
obo:GO_0043170c
Sub-classes obo:GO_0044267c

immunoglobulin complexc # Classes

URI http://purl.obolibrary.org/obo/GO_0019814
Super-classes obo:GO_0032991c
Sub-classes obo:GO_0042571c

B cell receptor complexc # Classes

URI http://purl.obolibrary.org/obo/GO_0019815
Super-classes obo:OBI_1110022c

protein domain specific bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0019904
Super-classes obo:OBI_0001588c
obo:GO_0005515c

cellular component disassemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_0022411
Super-classes obo:GO_0016043c
Sub-classes obo:GO_0006921c

regulation of anatomical structure morphogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_0022603
Super-classes obo:GO_0050793c
Restrictions obo:RO_0002211op some obo:GO_0009653c
Sub-classes obo:GO_1902337c

cellular component assemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_0022607
Super-classes obo:GO_0016043c
Restrictions obo:BFO_0000050op some obo:GO_0044085c
Sub-classes obo:GO_0010927c
obo:GO_0030031c

passive transmembrane transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0022803
Super-classes obo:GO_0022857c
Sub-classes obo:GO_0015267c

transmembrane transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0022857
Super-classes obo:GO_0005215c
Restrictions obo:BFO_0000050op some obo:GO_0055085c
Sub-classes obo:GO_0015318c
obo:GO_0015075c
obo:GO_0022803c

regulation of transmembrane transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0022898
Super-classes obo:GO_0032409c
obo:GO_0034762c
Restrictions obo:RO_0002211op some obo:GO_0022857c
Sub-classes obo:GO_0032412c

cell projection organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0030030
Super-classes obo:GO_0016043c
Sub-classes obo:GO_0030031c
obo:GO_0120036c

cell projection assemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_0030031
Super-classes obo:GO_0030030c
obo:GO_0022607c
Sub-classes obo:GO_0120031c

actin filament polymerizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0030041
Super-classes obo:GO_0008150c

hemopoiesisc # Classes

URI http://purl.obolibrary.org/obo/GO_0030097
Super-classes obo:GO_0008150c

apoptotic nuclear changesc # Classes

URI http://purl.obolibrary.org/obo/GO_0030262
Super-classes obo:GO_0006921c

positive regulation of cell growthc # Classes

URI http://purl.obolibrary.org/obo/GO_0030307
Super-classes obo:GO_0048522c
obo:GO_0045927c
obo:GO_0001558c
Restrictions obo:RO_0002213op some obo:GO_0016049c

negative regulation of cell growthc # Classes

URI http://purl.obolibrary.org/obo/GO_0030308
Super-classes obo:GO_0045926c
obo:GO_0048523c
obo:GO_0001558c
Restrictions obo:RO_0002212op some obo:GO_0016049c

regulation of cell migrationc # Classes

URI http://purl.obolibrary.org/obo/GO_0030334
Super-classes obo:GO_2000145c
Restrictions obo:RO_0002211op some obo:GO_0016477c
Sub-classes obo:GO_0030335c
obo:GO_0030336c

positive regulation of cell migrationc # Classes

URI http://purl.obolibrary.org/obo/GO_0030335
Super-classes obo:GO_0030334c
obo:GO_2000147c
Restrictions obo:RO_0002213op some obo:GO_0016477c

negative regulation of cell migrationc # Classes

URI http://purl.obolibrary.org/obo/GO_0030336
Super-classes obo:GO_0030334c
obo:GO_2000146c
Restrictions obo:RO_0002212op some obo:GO_0016477c

gene silencing by RNAc # Classes

URI http://purl.obolibrary.org/obo/GO_0031047
Super-classes obo:GO_0016458c
Sub-classes obo:GO_0035194c

regulation of cellular metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0031323
Super-classes obo:GO_0019222c
obo:GO_0050794c
Restrictions obo:RO_0002211op some obo:GO_0044237c
Sub-classes obo:GO_0032268c
obo:GO_0031326c
obo:GO_0031325c
obo:GO_0031324c
obo:GO_0031329c
obo:GO_0019219c
obo:GO_0034248c

negative regulation of cellular metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0031324
Super-classes obo:GO_0031323c
obo:GO_0009892c
obo:GO_0048523c
Restrictions obo:RO_0002212op some obo:GO_0044237c
Sub-classes obo:GO_0045934c
obo:GO_0034249c
obo:GO_0032269c
obo:GO_0031327c
obo:GO_0031330c

positive regulation of cellular metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0031325
Super-classes obo:GO_0031323c
obo:GO_0009893c
obo:GO_0048522c
Restrictions obo:RO_0002213op some obo:GO_0044237c
Sub-classes obo:GO_0045935c
obo:GO_0031328c
obo:GO_0031331c
obo:GO_0034250c
obo:GO_0032270c

regulation of cellular biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0031326
Super-classes obo:GO_0009889c
obo:GO_0031323c
Restrictions obo:RO_0002211op some obo:GO_0044249c
Sub-classes obo:GO_2001141c
obo:GO_0031327c
obo:GO_0031328c
obo:GO_2000112c

negative regulation of cellular biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0031327
Super-classes obo:GO_0031326c
obo:GO_0009890c
obo:GO_0031324c
Restrictions obo:RO_0002212op some obo:GO_0044249c
Sub-classes obo:GO_2000113c
obo:GO_1902679c

positive regulation of cellular biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0031328
Super-classes obo:GO_0031325c
obo:GO_0009891c
obo:GO_0031326c
Restrictions obo:RO_0002213op some obo:GO_0044249c
Sub-classes obo:GO_1902680c
obo:GO_2000573c
obo:GO_0045727c
obo:GO_0045740c

regulation of cellular catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0031329
Super-classes obo:GO_0031323c
obo:GO_0009894c
Restrictions obo:RO_0002211op some obo:GO_0044248c
Sub-classes obo:GO_0031330c
obo:GO_0031331c
obo:GO_1903624c

negative regulation of cellular catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0031330
Super-classes obo:GO_0031329c
obo:GO_0031324c
obo:GO_0009895c
Restrictions obo:RO_0002212op some obo:GO_0044248c
Sub-classes obo:GO_1903625c

positive regulation of cellular catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0031331
Super-classes obo:GO_0031325c
obo:GO_0031329c
obo:GO_0009896c
Restrictions obo:RO_0002213op some obo:GO_0044248c
Sub-classes obo:GO_1903626c

regulation of cell killingc # Classes

URI http://purl.obolibrary.org/obo/GO_0031341
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002211op some obo:GO_0001906c
Sub-classes obo:GO_0031342c
obo:GO_0031343c

negative regulation of cell killingc # Classes

URI http://purl.obolibrary.org/obo/GO_0031342
Super-classes obo:GO_0031341c
obo:GO_0048519c
Restrictions obo:RO_0002212op some obo:GO_0001906c

positive regulation of cell killingc # Classes

URI http://purl.obolibrary.org/obo/GO_0031343
Super-classes obo:GO_0031341c
obo:GO_0048518c
Restrictions obo:RO_0002213op some obo:GO_0001906c

regulation of cell projection organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0031344
Super-classes obo:GO_0051128c
Restrictions obo:RO_0002211op some obo:GO_0030030c
Sub-classes obo:GO_0060491c
obo:GO_0120035c
obo:GO_0031346c
obo:GO_0031345c

negative regulation of cell projection organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0031345
Super-classes obo:GO_0051129c
obo:GO_0031344c
Restrictions obo:RO_0002212op some obo:GO_0030030c
Sub-classes obo:GO_0120033c

positive regulation of cell projection organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0031346
Super-classes obo:GO_0051130c
obo:GO_0031344c
Restrictions obo:RO_0002213op some obo:GO_0030030c
Sub-classes obo:GO_0120034c

bleb assemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_0032060
Super-classes obo:GO_0120031c

regulation of nuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032069
Super-classes obo:GO_0060255c
obo:GO_0051336c
obo:GO_0019219c
Restrictions obo:RO_0002211op some obo:GO_0004518c
Sub-classes obo:GO_0032070c
obo:GO_0032075c
obo:GO_0032074c

regulation of deoxyribonuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032070
Super-classes obo:GO_0032069c
obo:GO_0051052c
Restrictions obo:RO_0002211op some obo:GO_0004536c
Sub-classes obo:GO_0032071c
obo:GO_0032077c
obo:GO_0032076c

regulation of endodeoxyribonuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032071
Super-classes obo:GO_0032070c
Restrictions obo:RO_0002211op some obo:GO_0004520c
Sub-classes obo:GO_0032078c
obo:GO_0032079c

negative regulation of nuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032074
Super-classes obo:GO_0010605c
obo:GO_0051346c
obo:GO_0032069c
obo:GO_0045934c
Restrictions obo:RO_0002212op some obo:GO_0004518c
Sub-classes obo:GO_0032076c

positive regulation of nuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032075
Super-classes obo:GO_0010604c
obo:GO_0045935c
obo:GO_0032069c
obo:GO_0051345c
Restrictions obo:RO_0002213op some obo:GO_0004518c
Sub-classes obo:GO_0032077c

negative regulation of deoxyribonuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032076
Super-classes obo:GO_0032074c
obo:GO_0032070c
obo:GO_0051053c
Restrictions obo:RO_0002212op some obo:GO_0004536c
Sub-classes obo:GO_0032078c

positive regulation of deoxyribonuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032077
Super-classes obo:GO_0032075c
obo:GO_0051054c
obo:GO_0032070c
Restrictions obo:RO_0002213op some obo:GO_0004536c
Sub-classes obo:GO_0032079c

negative regulation of endodeoxyribonuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032078
Super-classes obo:GO_0032076c
obo:GO_0032071c
Restrictions obo:RO_0002212op some obo:GO_0004520c

positive regulation of endodeoxyribonuclease activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032079
Super-classes obo:GO_0032077c
obo:GO_0032071c
Restrictions obo:RO_0002213op some obo:GO_0004520c

negative regulation of protein bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0032091
Super-classes obo:GO_0051100c
obo:GO_0043393c
Restrictions obo:RO_0002212op some obo:GO_0005515c

positive regulation of protein bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0032092
Super-classes obo:GO_0051099c
obo:GO_0043393c
Restrictions obo:RO_0002213op some obo:GO_0005515c

regulation of response to external stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0032101
Super-classes obo:GO_0048583c
Restrictions obo:RO_0002211op some obo:GO_0009605c
Sub-classes obo:GO_0032102c
obo:GO_0032103c
obo:GO_0050920c

negative regulation of response to external stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0032102
Super-classes obo:GO_0032101c
obo:GO_0048585c
Restrictions obo:RO_0002212op some obo:GO_0009605c
Sub-classes obo:GO_0050922c
obo:GO_0061045c

positive regulation of response to external stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0032103
Super-classes obo:GO_0048584c
obo:GO_0032101c
Restrictions obo:RO_0002213op some obo:GO_0009605c
Sub-classes obo:GO_0050921c

methylationc # Classes

URI http://purl.obolibrary.org/obo/GO_0032259
Super-classes obo:GO_0008152c
Sub-classes obo:GO_0043414c

regulation of cellular protein metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0032268
Super-classes obo:GO_0031323c
obo:GO_0051246c
Restrictions obo:RO_0002211op some obo:GO_0044267c
Sub-classes obo:GO_0006417c
obo:GO_0032269c
obo:GO_0032270c

negative regulation of cellular protein metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0032269
Super-classes obo:GO_0032268c
obo:GO_0051248c
obo:GO_0031324c
Restrictions obo:RO_0002212op some obo:GO_0044267c
Sub-classes obo:GO_0017148c

positive regulation of cellular protein metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0032270
Super-classes obo:GO_0032268c
obo:GO_0051247c
obo:GO_0031325c
Restrictions obo:RO_0002213op some obo:GO_0044267c
Sub-classes obo:GO_0045727c

regulation of icosanoid secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0032303
Super-classes obo:GO_0051046c
obo:GO_2000191c
Restrictions obo:RO_0002211op some obo:GO_0032309c
Sub-classes obo:GO_0032304c
obo:GO_0032305c
obo:GO_0090237c

negative regulation of icosanoid secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0032304
Super-classes obo:GO_0051048c
obo:GO_0032303c
obo:GO_2000192c
Restrictions obo:RO_0002212op some obo:GO_0032309c
Sub-classes obo:GO_1900139c

positive regulation of icosanoid secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0032305
Super-classes obo:GO_0032303c
obo:GO_0051047c
obo:GO_2000193c
Restrictions obo:RO_0002213op some obo:GO_0032309c
Sub-classes obo:GO_0090238c

icosanoid secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0032309
Super-classes obo:GO_0071715c
obo:GO_0046717c
Sub-classes obo:GO_0050482c

regulation of lipid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0032368
Super-classes obo:GO_0051049c
obo:GO_1905952c
Restrictions obo:RO_0002211op some obo:GO_0006869c
Sub-classes obo:GO_2000191c
obo:GO_0032370c
obo:GO_0032369c

negative regulation of lipid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0032369
Super-classes obo:GO_0051051c
obo:GO_0032368c
obo:GO_1905953c
Restrictions obo:RO_0002212op some obo:GO_0006869c
Sub-classes obo:GO_2000192c

positive regulation of lipid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0032370
Super-classes obo:GO_1905954c
obo:GO_0032368c
obo:GO_0051050c
Restrictions obo:RO_0002213op some obo:GO_0006869c
Sub-classes obo:GO_2000193c

regulation of transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032409
Super-classes obo:GO_0065009c
Restrictions obo:RO_0002211op some obo:GO_0005215c
Sub-classes obo:GO_0032410c
obo:GO_0022898c
obo:GO_0032411c

negative regulation of transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032410
Super-classes obo:GO_0032409c
obo:GO_0044092c
obo:GO_0051051c
Restrictions obo:RO_0002212op some obo:GO_0005215c
Sub-classes obo:GO_0032413c

positive regulation of transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032411
Super-classes obo:GO_0044093c
obo:GO_0051050c
obo:GO_0032409c
Restrictions obo:RO_0002213op some obo:GO_0005215c
Sub-classes obo:GO_0032414c

regulation of ion transmembrane transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032412
Super-classes obo:GO_0022898c
obo:GO_0034765c
Restrictions obo:RO_0002211op some obo:GO_0015075c
Sub-classes obo:GO_0032413c
obo:GO_0032414c

negative regulation of ion transmembrane transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032413
Super-classes obo:GO_0032410c
obo:GO_0032412c
obo:GO_0034766c
Restrictions obo:RO_0002212op some obo:GO_0015075c

positive regulation of ion transmembrane transporter activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0032414
Super-classes obo:GO_0032412c
obo:GO_0032411c
obo:GO_0034767c
Restrictions obo:RO_0002213op some obo:GO_0015075c

multicellular organismal processc # Classes

URI http://purl.obolibrary.org/obo/GO_0032501
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0001816c

developmental processc # Classes

URI http://purl.obolibrary.org/obo/GO_0032502
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0048532c
obo:GO_0048646c
obo:GO_0048869c
obo:GO_0007568c
obo:GO_0009653c
obo:GO_0048856c

ribonucleoside bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0032549
Super-classes obo:GO_0001882c

tumor necrosis factor productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0032640
Super-classes obo:GO_0071706c

regulation of tumor necrosis factor productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0032680
Super-classes obo:GO_1903555c
Restrictions obo:RO_0002211op some obo:GO_0032640c
Sub-classes obo:GO_0032720c
obo:GO_0032760c
obo:GO_1904467c

negative regulation of tumor necrosis factor productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0032720
Super-classes obo:GO_1903556c
obo:GO_0032680c
Restrictions obo:RO_0002212op some obo:GO_0032640c
Sub-classes obo:GO_1904468c

positive regulation of tumor necrosis factor productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0032760
Super-classes obo:GO_1903557c
obo:GO_0032680c
Restrictions obo:RO_0002213op some obo:GO_0032640c
Sub-classes obo:GO_1904469c

RNA biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0032774
Super-classes obo:GO_0016070c
obo:GO_0034654c
obo:GO_0009059c
Sub-classes obo:GO_0097659c

regulation of localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0032879
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002211op some obo:GO_0051179c
Sub-classes obo:GO_0051049c
obo:GO_1905952c
obo:GO_0051270c
obo:GO_0060341c
obo:GO_0032880c

regulation of protein localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0032880
Super-classes obo:GO_0032879c
Restrictions obo:RO_0002211op some obo:GO_0008104c
Sub-classes obo:GO_1903827c
obo:GO_0070201c

regulation of organic acid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0032890
Super-classes obo:GO_0051049c
Restrictions obo:RO_0002211op some obo:GO_0015849c
Sub-classes obo:GO_0032891c
obo:GO_0032892c
obo:GO_2000191c

negative regulation of organic acid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0032891
Super-classes obo:GO_0032890c
obo:GO_0051051c
Restrictions obo:RO_0002212op some obo:GO_0015849c
Sub-classes obo:GO_2000192c

positive regulation of organic acid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0032892
Super-classes obo:GO_0051050c
obo:GO_0032890c
Restrictions obo:RO_0002213op some obo:GO_0015849c
Sub-classes obo:GO_2000193c

secretion by cellc # Classes

URI http://purl.obolibrary.org/obo/GO_0032940
Super-classes obo:GO_0046903c
obo:GO_0140352c
Sub-classes obo:GO_0009306c

cellular component morphogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_0032989
Super-classes obo:GO_0048869c
obo:GO_0009653c
obo:GO_0016043c

protein-containing complexc # Classes

URI http://purl.obolibrary.org/obo/GO_0032991
Super-classes obo:GO_0005575c
Restrictions obo:BFO_0000051op some obo:PR_000000001c
Sub-classes obo:GO_0019814c
obo:GO_0042575c
obo:GO_1902494c
obo:OBI_1110022c

macromolecule localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0033036
Super-classes obo:GO_0051179c
Sub-classes obo:GO_0010876c
obo:GO_0070727c
obo:GO_0008104c

regulation of organelle organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0033043
Super-classes obo:GO_0051128c
Restrictions obo:RO_0002211op some obo:GO_0006996c
Sub-classes obo:GO_0010638c
obo:GO_1903353c
obo:GO_0010639c
obo:GO_0033044c

regulation of chromosome organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0033044
Super-classes obo:GO_0033043c
Restrictions obo:RO_0002211op some obo:GO_0051276c
Sub-classes obo:GO_2001252c
obo:GO_2001251c

amide bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0033218
Super-classes obo:GO_0005488c
Sub-classes obo:GO_0042277c

cellular response to stressc # Classes

URI http://purl.obolibrary.org/obo/GO_0033554
Super-classes obo:GO_0051716c
obo:GO_0006950c
Sub-classes obo:GO_0006974c

DNA polymerase activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0034061
Super-classes obo:GO_0003824c

ion transmembrane transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0034220
Super-classes obo:GO_0055085c
obo:GO_0006811c

regulation of cellular amide metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0034248
Super-classes obo:GO_0031323c
obo:GO_0051171c
Restrictions obo:RO_0002211op some obo:GO_0043603c
Sub-classes obo:GO_0006417c
obo:GO_0034250c
obo:GO_0034249c

negative regulation of cellular amide metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0034249
Super-classes obo:GO_0051172c
obo:GO_0031324c
obo:GO_0034248c
Restrictions obo:RO_0002212op some obo:GO_0043603c
Sub-classes obo:GO_0017148c

positive regulation of cellular amide metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0034250
Super-classes obo:GO_0051173c
obo:GO_0031325c
obo:GO_0034248c
Restrictions obo:RO_0002213op some obo:GO_0043603c
Sub-classes obo:GO_0045727c

cellular protein localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0034613
Super-classes obo:GO_0008104c
obo:GO_0070727c
Sub-classes obo:GO_0043143c

cellular nitrogen compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0034641
Super-classes obo:GO_0044237c
obo:GO_0006807c
Sub-classes obo:GO_0044271c
obo:GO_0006139c
obo:GO_0043603c
obo:GO_0044270c

cellular macromolecule biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0034645
Super-classes obo:GO_0044260c
obo:GO_0044249c
obo:GO_0009059c
Sub-classes obo:GO_0071897c
obo:GO_0006414c
obo:GO_0006351c
obo:GO_0006412c
obo:GO_0006260c

nucleobase-containing compound biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0034654
Super-classes obo:GO_0018130c
obo:GO_0006139c
obo:GO_0019438c
obo:GO_1901362c
obo:GO_0044271c
Sub-classes obo:GO_0071897c
obo:GO_0032774c

nucleobase-containing compound catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0034655
Super-classes obo:GO_0006139c
obo:GO_0044270c
obo:GO_0019439c
obo:GO_0046700c
obo:GO_1901361c
Sub-classes obo:GO_0006308c

ncRNA metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0034660
Super-classes obo:GO_0016070c
Sub-classes obo:GO_0042868c

methyltransferase complexc # Classes

URI http://purl.obolibrary.org/obo/GO_0034708
Super-classes obo:GO_1990234c
Restrictions obo:BFO_0000050op some obo:GO_0005622c

regulation of transmembrane transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0034762
Super-classes obo:GO_0051049c
Restrictions obo:RO_0002211op some obo:GO_0055085c
Sub-classes obo:GO_0034763c
obo:GO_0034764c
obo:GO_0034765c
obo:GO_0022898c

negative regulation of transmembrane transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0034763
Super-classes obo:GO_0034762c
obo:GO_0051051c
Restrictions obo:RO_0002212op some obo:GO_0055085c
Sub-classes obo:GO_0034766c

positive regulation of transmembrane transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0034764
Super-classes obo:GO_0034762c
obo:GO_0051050c
Restrictions obo:RO_0002213op some obo:GO_0055085c
Sub-classes obo:GO_0034767c

regulation of ion transmembrane transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0034765
Super-classes obo:GO_0034762c
obo:GO_0043269c
Restrictions obo:RO_0002211op some obo:GO_0034220c
Sub-classes obo:GO_0034766c
obo:GO_0032412c
obo:GO_0034767c

negative regulation of ion transmembrane transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0034766
Super-classes obo:GO_0034763c
obo:GO_0034765c
obo:GO_0043271c
Restrictions obo:RO_0002212op some obo:GO_0034220c
Sub-classes obo:GO_0032413c

positive regulation of ion transmembrane transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0034767
Super-classes obo:GO_0043270c
obo:GO_0034764c
obo:GO_0034765c
Restrictions obo:RO_0002213op some obo:GO_0034220c
Sub-classes obo:GO_0032414c

posttranscriptional gene silencing by RNAc # Classes

URI http://purl.obolibrary.org/obo/GO_0035194
Super-classes obo:GO_0031047c
obo:GO_0016441c
Sub-classes obo:GO_0016246c

establishment of protein localization to extracellular regionc # Classes

URI http://purl.obolibrary.org/obo/GO_0035592
Super-classes obo:GO_0071692c
obo:GO_0045184c
Sub-classes obo:GO_0009306c

cellular response to drugc # Classes

URI http://purl.obolibrary.org/obo/GO_0035690
Super-classes obo:GO_0042493c
obo:GO_0070887c
Sub-classes obo:GO_0072749c

small molecule bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0036094
Super-classes obo:GO_0005488c
Sub-classes obo:GO_0001882c

cellular response to mycotoxinc # Classes

URI http://purl.obolibrary.org/obo/GO_0036146
Super-classes obo:GO_0097237c
obo:GO_0010046c
Sub-classes obo:GO_0072749c

growthc # Classes

URI http://purl.obolibrary.org/obo/GO_0040007
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0016049c

regulation of growthc # Classes

URI http://purl.obolibrary.org/obo/GO_0040008
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002211op some obo:GO_0040007c
Sub-classes obo:GO_0045927c
obo:GO_0001558c
obo:GO_0045926c

locomotionc # Classes

URI http://purl.obolibrary.org/obo/GO_0040011
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0042330c
obo:GO_0048870c

regulation of locomotionc # Classes

URI http://purl.obolibrary.org/obo/GO_0040012
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002211op some obo:GO_0040011c
Sub-classes obo:GO_0040013c
obo:GO_0050920c
obo:GO_0040017c
obo:GO_2000145c

negative regulation of locomotionc # Classes

URI http://purl.obolibrary.org/obo/GO_0040013
Super-classes obo:GO_0040012c
obo:GO_0048519c
Restrictions obo:RO_0002212op some obo:GO_0040011c
Sub-classes obo:GO_2000146c
obo:GO_0050922c

positive regulation of locomotionc # Classes

URI http://purl.obolibrary.org/obo/GO_0040017
Super-classes obo:GO_0048518c
obo:GO_0040012c
Restrictions obo:RO_0002213op some obo:GO_0040011c
Sub-classes obo:GO_2000147c
obo:GO_0050921c

regulation of gene expression, epigeneticc # Classes

URI http://purl.obolibrary.org/obo/GO_0040029
Super-classes obo:GO_0010468c
Sub-classes obo:GO_0016441c

regulation of molecular function, epigeneticc # Classes

URI http://purl.obolibrary.org/obo/GO_0040030
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0044030c

negative regulation of translation, ncRNA-mediatedc # Classes

URI http://purl.obolibrary.org/obo/GO_0040033
Super-classes obo:GO_0017148c
obo:GO_0045974c
Sub-classes obo:GO_0070549c

wound healingc # Classes

URI http://purl.obolibrary.org/obo/GO_0042060
Super-classes obo:GO_0009611c

T cell receptor complexc # Classes

URI http://purl.obolibrary.org/obo/GO_0042101
Super-classes obo:OBI_1110022c

regulation of cell population proliferationc # Classes

URI http://purl.obolibrary.org/obo/GO_0042127
Super-classes obo:GO_0050794c
Restrictions obo:RO_0002211op some obo:GO_0008283c
Sub-classes obo:GO_0008285c
obo:GO_0008284c

response to chemicalc # Classes

URI http://purl.obolibrary.org/obo/GO_0042221
Super-classes obo:GO_0050896c
Sub-classes obo:GO_1901700c
obo:GO_0009636c
obo:GO_0010033c
obo:GO_1901698c
obo:GO_0070887c
obo:GO_0042493c
obo:GO_0046677c

peptide bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0042277
Super-classes obo:GO_0033218c
Sub-classes obo:GO_0042605c

taxisc # Classes

URI http://purl.obolibrary.org/obo/GO_0042330
Super-classes obo:GO_0040011c
Restrictions obo:BFO_0000050op some obo:GO_0009605c
Sub-classes obo:GO_0006935c

regulation of membrane potentialc # Classes

URI http://purl.obolibrary.org/obo/GO_0042391
Super-classes obo:GO_0065008c
Sub-classes obo:GO_0001508c
obo:GO_0098900c

response to drugc # Classes

URI http://purl.obolibrary.org/obo/GO_0042493
Super-classes obo:GO_0042221c
Sub-classes obo:GO_0035690c
obo:GO_0061478c

immunoglobulin complex, circulatingc # Classes

URI http://purl.obolibrary.org/obo/GO_0042571
Super-classes obo:OBI_1110022c
obo:GO_0019814c

DNA polymerase complexc # Classes

URI http://purl.obolibrary.org/obo/GO_0042575
Super-classes obo:OBI_0000427c
obo:GO_0032991c
Restrictions obo:RO_0000085op some ()

peptide antigen bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0042605
Super-classes obo:GO_0003823c
obo:GO_0042277c

biofilm formationc # Classes

URI http://purl.obolibrary.org/obo/GO_0042710
Super-classes obo:GO_0044764c

antisense RNA metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0042868
Super-classes obo:GO_0034660c
Sub-classes obo:GO_0009300c

amide transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0042886
Super-classes obo:GO_0071705c
Sub-classes obo:GO_0015833c

regulation of apoptotic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0042981
Super-classes obo:GO_0043067c
Restrictions obo:RO_0002211op some obo:GO_0006915c
Sub-classes obo:GO_0043066c
obo:GO_0043065c
obo:GO_1904748c
obo:GO_1900117c

peptide biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0043043
Super-classes obo:GO_1901566c
obo:GO_0043604c
obo:GO_0006518c
Sub-classes obo:GO_0006412c

positive regulation of apoptotic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0043065
Super-classes obo:GO_0042981c
obo:GO_0043068c
Restrictions obo:RO_0002213op some obo:GO_0006915c
Sub-classes obo:GO_1904747c
obo:GO_1900119c

negative regulation of apoptotic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0043066
Super-classes obo:GO_0042981c
obo:GO_0043069c
Restrictions obo:RO_0002212op some obo:GO_0006915c
Sub-classes obo:GO_1904746c
obo:GO_1900118c

regulation of programmed cell deathc # Classes

URI http://purl.obolibrary.org/obo/GO_0043067
Super-classes obo:GO_0010941c
Restrictions obo:RO_0002211op some obo:GO_0012501c
Sub-classes obo:GO_0042981c
obo:GO_0043069c
obo:GO_0043068c

positive regulation of programmed cell deathc # Classes

URI http://purl.obolibrary.org/obo/GO_0043068
Super-classes obo:GO_0043067c
obo:GO_0010942c
Restrictions obo:RO_0002213op some obo:GO_0012501c
Sub-classes obo:GO_0043065c

negative regulation of programmed cell deathc # Classes

URI http://purl.obolibrary.org/obo/GO_0043069
Super-classes obo:GO_0043067c
obo:GO_0060548c
Restrictions obo:RO_0002212op some obo:GO_0012501c
Sub-classes obo:GO_0043066c

positive regulation of catalytic activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0043085
Super-classes obo:GO_0050790c
obo:GO_0044093c
Restrictions obo:RO_0002213op some obo:GO_0003824c
Sub-classes obo:GO_0051345c

negative regulation of catalytic activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0043086
Super-classes obo:GO_0050790c
obo:GO_0044092c
Restrictions obo:RO_0002212op some obo:GO_0003824c
Sub-classes obo:GO_0051346c

regulation of translation by machinery localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0043143
Super-classes obo:GO_0034613c
obo:GO_0006417c
Restrictions obo:BFO_0000050op some obo:GO_0006412c

macromolecule metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0043170
Super-classes obo:GO_0071704c
Sub-classes obo:GO_0009059c
obo:GO_0009057c
obo:GO_0043412c
obo:GO_0010467c
obo:GO_0090304c
obo:GO_0044260c
obo:GO_0019538c

regulation of ion transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0043269
Super-classes obo:GO_0051049c
Restrictions obo:RO_0002211op some obo:GO_0006811c
Sub-classes obo:GO_0043270c
obo:GO_0044070c
obo:GO_0043271c
obo:GO_0034765c

positive regulation of ion transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0043270
Super-classes obo:GO_0043269c
obo:GO_0051050c
Restrictions obo:RO_0002213op some obo:GO_0006811c
Sub-classes obo:GO_1903793c
obo:GO_0034767c

negative regulation of ion transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0043271
Super-classes obo:GO_0051051c
obo:GO_0043269c
Restrictions obo:RO_0002212op some obo:GO_0006811c
Sub-classes obo:GO_1903792c
obo:GO_0034766c

positive regulation of DNA bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0043388
Super-classes obo:GO_0051101c
obo:GO_0051099c
Restrictions obo:RO_0002213op some obo:GO_0003677c
Sub-classes obo:GO_2000679c

negative regulation of DNA bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0043392
Super-classes obo:GO_0051101c
obo:GO_0051100c
Restrictions obo:RO_0002212op some obo:GO_0003677c
Sub-classes obo:GO_2000678c

regulation of protein bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0043393
Super-classes obo:GO_0051098c
Restrictions obo:RO_0002211op some obo:GO_0005515c
Sub-classes obo:GO_0032091c
obo:GO_0032092c

macromolecule modificationc # Classes

URI http://purl.obolibrary.org/obo/GO_0043412
Super-classes obo:GO_0043170c
Sub-classes obo:GO_0006304c
obo:GO_0043414c

macromolecule methylationc # Classes

URI http://purl.obolibrary.org/obo/GO_0043414
Super-classes obo:GO_0044260c
obo:GO_0043412c
obo:GO_0032259c
Sub-classes obo:GO_0006306c

sequence-specific DNA bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0043565
Super-classes obo:GO_0003677c
obo:OBI_0001588c

cellular amide metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0043603
Super-classes obo:GO_0034641c
Sub-classes obo:GO_0006518c
obo:GO_0043604c

amide biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0043604
Super-classes obo:GO_0044271c
obo:GO_0043603c
Sub-classes obo:GO_0043043c

regulation of multi-organism processc # Classes

URI http://purl.obolibrary.org/obo/GO_0043900
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002211op some obo:GO_0051704c
Sub-classes obo:GO_0043902c
obo:GO_0043901c

negative regulation of multi-organism processc # Classes

URI http://purl.obolibrary.org/obo/GO_0043901
Super-classes obo:GO_0048519c
obo:GO_0043900c
Restrictions obo:RO_0002212op some obo:GO_0051704c

positive regulation of multi-organism processc # Classes

URI http://purl.obolibrary.org/obo/GO_0043902
Super-classes obo:GO_0043900c
obo:GO_0048518c
Restrictions obo:RO_0002213op some obo:GO_0051704c

regulation of DNA methylationc # Classes

URI http://purl.obolibrary.org/obo/GO_0044030
Super-classes obo:GO_0051052c
obo:GO_0040030c
Restrictions obo:RO_0002211op some obo:GO_0006306c
Sub-classes obo:GO_1905643c
obo:GO_1905642c

regulation of anion transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0044070
Super-classes obo:GO_0043269c
Restrictions obo:RO_0002211op some obo:GO_0006820c
Sub-classes obo:GO_1903792c
obo:GO_2000191c
obo:GO_1903793c

cellular component biogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_0044085
Super-classes obo:GO_0071840c

regulation of cellular component biogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_0044087
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002211op some obo:GO_0044085c
Sub-classes obo:GO_0044089c
obo:GO_0060491c

positive regulation of cellular component biogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_0044089
Super-classes obo:GO_0048518c
obo:GO_0044087c
Restrictions obo:RO_0002213op some obo:GO_0044085c
Sub-classes obo:GO_0120034c

negative regulation of molecular functionc # Classes

URI http://purl.obolibrary.org/obo/GO_0044092
Super-classes obo:GO_0065009c
Restrictions obo:RO_0002212op some obo:GO_0003674c
Sub-classes obo:GO_0032410c
obo:GO_0043086c
obo:GO_0051100c

positive regulation of molecular functionc # Classes

URI http://purl.obolibrary.org/obo/GO_0044093
Super-classes obo:GO_0065009c
Restrictions obo:RO_0002213op some obo:GO_0003674c
Sub-classes obo:GO_0032411c
obo:GO_0051099c
obo:GO_0043085c

transcription regulatory region DNA bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0044212
Super-classes obo:GO_0001067c
obo:GO_0003677c
Sub-classes obo:GO_0001047c

cellular metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0044237
Super-classes obo:GO_0009987c
obo:GO_0008152c
Sub-classes obo:GO_0044249c
obo:GO_0034641c
obo:GO_0044248c
obo:GO_0046483c
obo:GO_0044260c
obo:GO_0006725c

primary metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0044238
Super-classes obo:GO_0008152c
Sub-classes obo:GO_0019538c
obo:GO_0006139c

cellular catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0044248
Super-classes obo:GO_0044237c
obo:GO_0009056c
Sub-classes obo:GO_0044270c
obo:GO_0019439c
obo:GO_0044265c
obo:GO_0046700c

cellular biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0044249
Super-classes obo:GO_0044237c
obo:GO_0009058c
Sub-classes obo:GO_0044271c
obo:GO_0034645c
obo:GO_0018130c
obo:GO_0019438c

cellular macromolecule metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0044260
Super-classes obo:GO_0044237c
obo:GO_0043170c
Sub-classes obo:GO_0034645c
obo:GO_0043414c
obo:GO_0044267c
obo:GO_0044265c
obo:GO_0006259c

cellular macromolecule catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0044265
Super-classes obo:GO_0044248c
obo:GO_0044260c
obo:GO_0009057c
Sub-classes obo:GO_0006308c

cellular protein metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0044267
Super-classes obo:GO_0019538c
obo:GO_0044260c
Sub-classes obo:GO_0006412c

cellular nitrogen compound catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0044270
Super-classes obo:GO_0044248c
obo:GO_0034641c
Sub-classes obo:GO_0034655c

cellular nitrogen compound biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0044271
Super-classes obo:GO_0034641c
obo:GO_0044249c
Sub-classes obo:GO_0043604c
obo:GO_0034654c

DNA methylation or demethylationc # Classes

URI http://purl.obolibrary.org/obo/GO_0044728
Super-classes obo:GO_0006304c
Sub-classes obo:GO_0006306c

multi-organism cellular processc # Classes

URI http://purl.obolibrary.org/obo/GO_0044764
Super-classes obo:GO_0051704c
obo:GO_0009987c
Sub-classes obo:GO_0042710c

translation regulator activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0045182
Super-classes obo:GO_0003674c
Restrictions obo:BFO_0000050op some obo:GO_0006417c

establishment of protein localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0045184
Super-classes obo:GO_0008104c
obo:GO_0051234c
Sub-classes obo:GO_0035592c
obo:GO_0015031c

positive regulation of translationc # Classes

URI http://purl.obolibrary.org/obo/GO_0045727
Super-classes obo:GO_0006417c
obo:GO_0032270c
obo:GO_0010628c
obo:GO_0010557c
obo:GO_0034250c
obo:GO_0031328c
Restrictions obo:RO_0002213op some obo:GO_0006412c
Sub-classes obo:GO_0045901c

positive regulation of DNA replicationc # Classes

URI http://purl.obolibrary.org/obo/GO_0045740
Super-classes obo:GO_0006275c
obo:GO_0010557c
obo:GO_0031328c
Restrictions obo:RO_0002213op some obo:GO_0006260c

negative regulation of action potentialc # Classes

URI http://purl.obolibrary.org/obo/GO_0045759
Super-classes obo:GO_0098900c
obo:GO_0048519c
Restrictions obo:RO_0002212op some obo:GO_0001508c

positive regulation of action potentialc # Classes

URI http://purl.obolibrary.org/obo/GO_0045760
Super-classes obo:GO_0048518c
obo:GO_0098900c
Restrictions obo:RO_0002213op some obo:GO_0001508c

negative regulation of transcription, DNA-templatedc # Classes

URI http://purl.obolibrary.org/obo/GO_0045892
Super-classes obo:GO_0006355c
obo:GO_0010629c
obo:GO_2000113c
obo:GO_1903507c
Restrictions obo:RO_0002212op some obo:GO_0006351c
Sub-classes obo:GO_0060195c

positive regulation of transcription, DNA-templatedc # Classes

URI http://purl.obolibrary.org/obo/GO_0045893
Super-classes obo:GO_0006355c
obo:GO_0010628c
obo:GO_1903508c
Restrictions obo:RO_0002213op some obo:GO_0006351c
Sub-classes obo:GO_0060196c

negative regulation of translational elongationc # Classes

URI http://purl.obolibrary.org/obo/GO_0045900
Super-classes obo:GO_0017148c
obo:GO_0006448c
Restrictions obo:RO_0002212op some obo:GO_0006414c

positive regulation of translational elongationc # Classes

URI http://purl.obolibrary.org/obo/GO_0045901
Super-classes obo:GO_0045727c
obo:GO_0006448c
Restrictions obo:RO_0002213op some obo:GO_0006414c

negative regulation of growthc # Classes

URI http://purl.obolibrary.org/obo/GO_0045926
Super-classes obo:GO_0048519c
obo:GO_0040008c
Restrictions obo:RO_0002212op some obo:GO_0040007c
Sub-classes obo:GO_0030308c

positive regulation of growthc # Classes

URI http://purl.obolibrary.org/obo/GO_0045927
Super-classes obo:GO_0040008c
obo:GO_0048518c
Restrictions obo:RO_0002213op some obo:GO_0040007c
Sub-classes obo:GO_0030307c

negative regulation of nucleobase-containing compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0045934
Super-classes obo:GO_0051172c
obo:GO_0031324c
obo:GO_0019219c
Restrictions obo:RO_0002212op some obo:GO_0006139c
Sub-classes obo:GO_0051253c
obo:GO_0032074c
obo:GO_0051053c

positive regulation of nucleobase-containing compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0045935
Super-classes obo:GO_0051173c
obo:GO_0031325c
obo:GO_0019219c
Restrictions obo:RO_0002213op some obo:GO_0006139c
Sub-classes obo:GO_0032075c
obo:GO_0051054c
obo:GO_0051254c

regulation of translation, ncRNA-mediatedc # Classes

URI http://purl.obolibrary.org/obo/GO_0045974
Super-classes obo:GO_0006417c
Sub-classes obo:GO_0040033c

heterocycle metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0046483
Super-classes obo:GO_0044237c
Sub-classes obo:GO_0046700c
obo:GO_0006139c
obo:GO_0018130c

response to antibioticc # Classes

URI http://purl.obolibrary.org/obo/GO_0046677
Super-classes obo:GO_0042221c

heterocycle catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0046700
Super-classes obo:GO_0046483c
obo:GO_0044248c
Sub-classes obo:GO_0034655c

acid secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0046717
Super-classes obo:GO_0046903c
Sub-classes obo:GO_0032309c

secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0046903
Super-classes obo:GO_0006810c
Sub-classes obo:GO_0032940c
obo:GO_0046717c
obo:GO_0002790c

carboxylic acid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0046942
Super-classes obo:GO_0015711c
obo:GO_0015849c
Sub-classes obo:GO_0015718c
obo:GO_0071715c

positive regulation of biological processc # Classes

URI http://purl.obolibrary.org/obo/GO_0048518
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002213op some obo:GO_0008150c
Sub-classes obo:GO_0051240c
obo:GO_0009893c
obo:GO_1903829c
obo:GO_0051050c
obo:GO_1904951c
obo:GO_0048584c
obo:GO_0051094c
obo:GO_0045760c
obo:GO_0044089c
obo:GO_1904798c
obo:GO_0031343c
obo:GO_0043902c
obo:GO_0045927c
obo:GO_0040017c
obo:GO_1905954c
obo:GO_0048522c

negative regulation of biological processc # Classes

URI http://purl.obolibrary.org/obo/GO_0048519
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002212op some obo:GO_0008150c
Sub-classes obo:GO_0043901c
obo:GO_0048585c
obo:GO_0031342c
obo:GO_0051051c
obo:GO_0048523c
obo:GO_1905953c
obo:GO_1904797c
obo:GO_0040013c
obo:GO_0045926c
obo:GO_0051093c
obo:GO_1903828c
obo:GO_0009892c
obo:GO_0045759c
obo:GO_0051241c
obo:GO_1904950c

positive regulation of cellular processc # Classes

URI http://purl.obolibrary.org/obo/GO_0048522
Super-classes obo:GO_0048518c
obo:GO_0050794c
Restrictions obo:RO_0002213op some obo:GO_0009987c
Sub-classes obo:GO_1903532c
obo:GO_0060355c
obo:GO_0010942c
obo:GO_0051130c
obo:GO_0030307c
obo:GO_0008284c
obo:GO_0051272c
obo:GO_0031325c
obo:GO_0090343c
obo:GO_0060148c
obo:GO_2001022c
obo:GO_2001040c

negative regulation of cellular processc # Classes

URI http://purl.obolibrary.org/obo/GO_0048523
Super-classes obo:GO_0050794c
obo:GO_0048519c
Restrictions obo:RO_0002212op some obo:GO_0009987c
Sub-classes obo:GO_0051129c
obo:GO_0051271c
obo:GO_0060548c
obo:GO_0060354c
obo:GO_0030308c
obo:GO_0060969c
obo:GO_0031324c
obo:GO_1903531c
obo:GO_2001039c
obo:GO_0090344c
obo:GO_0008285c
obo:GO_2001021c

anatomical structure arrangementc # Classes

URI http://purl.obolibrary.org/obo/GO_0048532
Super-classes obo:GO_0032502c
Restrictions obo:BFO_0000050op some obo:GO_0009653c

regulation of response to stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0048583
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002211op some obo:GO_0050896c
Sub-classes obo:GO_0048585c
obo:GO_0048584c
obo:GO_2001023c
obo:GO_0032101c
obo:GO_0002831c
obo:GO_0080134c

positive regulation of response to stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0048584
Super-classes obo:GO_0048518c
obo:GO_0048583c
Restrictions obo:RO_0002213op some obo:GO_0050896c
Sub-classes obo:GO_1903036c
obo:GO_0002833c
obo:GO_2001022c
obo:GO_0032103c
obo:GO_2001025c

negative regulation of response to stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0048585
Super-classes obo:GO_0048519c
obo:GO_0048583c
Restrictions obo:RO_0002212op some obo:GO_0050896c
Sub-classes obo:GO_2001021c
obo:GO_1903035c
obo:GO_0002832c
obo:GO_0032102c
obo:GO_2001024c

anatomical structure formation involved in morphogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_0048646
Super-classes obo:GO_0032502c
Restrictions obo:BFO_0000050op some obo:GO_0009653c
Sub-classes obo:GO_0010927c

anatomical structure developmentc # Classes

URI http://purl.obolibrary.org/obo/GO_0048856
Super-classes obo:GO_0032502c

cellular developmental processc # Classes

URI http://purl.obolibrary.org/obo/GO_0048869
Super-classes obo:GO_0032502c
obo:GO_0009987c
Sub-classes obo:GO_0007569c
obo:GO_0032989c

cell motilityc # Classes

URI http://purl.obolibrary.org/obo/GO_0048870
Super-classes obo:GO_0006928c
obo:GO_0040011c
Restrictions obo:BFO_0000050op some obo:GO_0051674c
Sub-classes obo:GO_0016477c

arachidonic acid secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0050482
Super-classes obo:GO_0032309c
obo:GO_1903963c

cytokine secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0050663
Super-classes obo:GO_0009306c
Restrictions obo:BFO_0000050op some obo:GO_0001816c
Sub-classes obo:GO_1990774c

regulation of cytokine secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0050707
Super-classes obo:GO_0001817c
obo:GO_0050708c
Restrictions obo:RO_0002211op some obo:GO_0050663c
Sub-classes obo:GO_0050710c
obo:GO_1904467c
obo:GO_0050715c

regulation of protein secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0050708
Super-classes obo:GO_1903530c
obo:GO_0051223c
obo:GO_0002791c
Restrictions obo:RO_0002211op some obo:GO_0009306c
Sub-classes obo:GO_0050714c
obo:GO_0050709c
obo:GO_0050707c

negative regulation of protein secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0050709
Super-classes obo:GO_0002792c
obo:GO_0051224c
obo:GO_0050708c
obo:GO_1903531c
Restrictions obo:RO_0002212op some obo:GO_0009306c
Sub-classes obo:GO_0050710c

negative regulation of cytokine secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0050710
Super-classes obo:GO_0050707c
obo:GO_0001818c
obo:GO_0050709c
Restrictions obo:RO_0002212op some obo:GO_0050663c
Sub-classes obo:GO_1904468c

positive regulation of protein secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0050714
Super-classes obo:GO_1903532c
obo:GO_0050708c
obo:GO_0051222c
obo:GO_0002793c
Restrictions obo:RO_0002213op some obo:GO_0009306c
Sub-classes obo:GO_0050715c

positive regulation of cytokine secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0050715
Super-classes obo:GO_0050714c
obo:GO_0001819c
obo:GO_0050707c
Restrictions obo:RO_0002213op some obo:GO_0050663c
Sub-classes obo:GO_1904469c

regulation of biological processc # Classes

URI http://purl.obolibrary.org/obo/GO_0050789
Super-classes obo:GO_0065007c
Restrictions obo:RO_0002211op some obo:GO_0008150c
Sub-classes obo:GO_0043900c
obo:GO_0050794c
obo:GO_1904796c
obo:GO_0040012c
obo:GO_0048519c
obo:GO_0031341c
obo:GO_0040008c
obo:GO_0019222c
obo:GO_0032879c
obo:GO_0098900c
obo:GO_0048583c
obo:GO_0050793c
obo:GO_0044087c
obo:GO_0051239c
obo:GO_0048518c

regulation of catalytic activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0050790
Super-classes obo:GO_0065009c
Restrictions obo:RO_0002211op some obo:GO_0003824c
Sub-classes obo:GO_0043086c
obo:GO_0043085c
obo:GO_0051336c

regulation of developmental processc # Classes

URI http://purl.obolibrary.org/obo/GO_0050793
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002211op some obo:GO_0032502c
Sub-classes obo:GO_0022603c
obo:GO_0090342c
obo:GO_1904748c
obo:GO_0051094c
obo:GO_0051093c

regulation of cellular processc # Classes

URI http://purl.obolibrary.org/obo/GO_0050794
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002211op some obo:GO_0009987c
Sub-classes obo:GO_0010941c
obo:GO_0051128c
obo:GO_0090342c
obo:GO_0080135c
obo:GO_2001038c
obo:GO_0048523c
obo:GO_0060968c
obo:GO_0031323c
obo:GO_1903530c
obo:GO_0051270c
obo:GO_0042127c
obo:GO_0060353c
obo:GO_0048522c

response to stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0050896
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0006950c
obo:GO_0042221c
obo:GO_0009719c
obo:GO_0009607c
obo:GO_0009605c
obo:GO_0051716c

regulation of chemotaxisc # Classes

URI http://purl.obolibrary.org/obo/GO_0050920
Super-classes obo:GO_0040012c
obo:GO_0032101c
Restrictions obo:RO_0002211op some obo:GO_0006935c
Sub-classes obo:GO_0050921c
obo:GO_0050922c

positive regulation of chemotaxisc # Classes

URI http://purl.obolibrary.org/obo/GO_0050921
Super-classes obo:GO_0050920c
obo:GO_0032103c
obo:GO_0040017c
Restrictions obo:RO_0002213op some obo:GO_0006935c

negative regulation of chemotaxisc # Classes

URI http://purl.obolibrary.org/obo/GO_0050922
Super-classes obo:GO_0032102c
obo:GO_0050920c
obo:GO_0040013c
Restrictions obo:RO_0002212op some obo:GO_0006935c

regulation of secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0051046
Super-classes obo:GO_0051049c
Restrictions obo:RO_0002211op some obo:GO_0046903c
Sub-classes obo:GO_0002791c
obo:GO_0032303c
obo:GO_0051048c
obo:GO_0051047c
obo:GO_1903530c

positive regulation of secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0051047
Super-classes obo:GO_0051046c
obo:GO_0051050c
Restrictions obo:RO_0002213op some obo:GO_0046903c
Sub-classes obo:GO_0002793c
obo:GO_0032305c
obo:GO_1903532c

negative regulation of secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0051048
Super-classes obo:GO_0051051c
obo:GO_0051046c
Restrictions obo:RO_0002212op some obo:GO_0046903c
Sub-classes obo:GO_0032304c
obo:GO_0002792c
obo:GO_1903531c

regulation of transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0051049
Super-classes obo:GO_0032879c
Restrictions obo:RO_0002211op some obo:GO_0006810c
Sub-classes obo:GO_0051046c
obo:GO_0032368c
obo:GO_0032890c
obo:GO_0034762c
obo:GO_0090087c
obo:GO_0043269c
obo:GO_0051050c
obo:GO_0051051c

positive regulation of transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0051050
Super-classes obo:GO_0048518c
obo:GO_0051049c
Restrictions obo:RO_0002213op some obo:GO_0006810c
Sub-classes obo:GO_0032892c
obo:GO_0034764c
obo:GO_0032411c
obo:GO_0051222c
obo:GO_0051047c
obo:GO_0032370c
obo:GO_0043270c

negative regulation of transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0051051
Super-classes obo:GO_0048519c
obo:GO_0051049c
Restrictions obo:RO_0002212op some obo:GO_0006810c
Sub-classes obo:GO_0043271c
obo:GO_0051048c
obo:GO_0032369c
obo:GO_0032410c
obo:GO_0032891c
obo:GO_0034763c
obo:GO_0051224c

regulation of DNA metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051052
Super-classes obo:GO_0019219c
obo:GO_0060255c
Restrictions obo:RO_0002211op some obo:GO_0006259c
Sub-classes obo:GO_0051053c
obo:GO_2000278c
obo:GO_0044030c
obo:GO_0051054c
obo:GO_1903624c
obo:GO_0032070c

negative regulation of DNA metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051053
Super-classes obo:GO_0051052c
obo:GO_0010605c
obo:GO_0045934c
Restrictions obo:RO_0002212op some obo:GO_0006259c
Sub-classes obo:GO_1903625c
obo:GO_2000279c
obo:GO_1905642c
obo:GO_0032076c

positive regulation of DNA metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051054
Super-classes obo:GO_0051052c
obo:GO_0010604c
obo:GO_0045935c
Restrictions obo:RO_0002213op some obo:GO_0006259c
Sub-classes obo:GO_1905643c
obo:GO_1903626c
obo:GO_2000573c
obo:GO_0032077c

negative regulation of developmental processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051093
Super-classes obo:GO_0048519c
obo:GO_0050793c
Restrictions obo:RO_0002212op some obo:GO_0032502c
Sub-classes obo:GO_0090344c
obo:GO_1904746c

positive regulation of developmental processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051094
Super-classes obo:GO_0048518c
obo:GO_0050793c
Restrictions obo:RO_0002213op some obo:GO_0032502c
Sub-classes obo:GO_0090343c
obo:GO_1904747c

regulation of bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0051098
Super-classes obo:GO_0065009c
Restrictions obo:RO_0002211op some obo:GO_0005488c
Sub-classes obo:GO_0051101c
obo:GO_0043393c
obo:GO_0051100c
obo:GO_0051099c
obo:GO_1900130c

positive regulation of bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0051099
Super-classes obo:GO_0044093c
obo:GO_0051098c
Restrictions obo:RO_0002213op some obo:GO_0005488c
Sub-classes obo:GO_1900132c
obo:GO_0032092c
obo:GO_0043388c

negative regulation of bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0051100
Super-classes obo:GO_0051098c
obo:GO_0044092c
Restrictions obo:RO_0002212op some obo:GO_0005488c
Sub-classes obo:GO_1900131c
obo:GO_0032091c
obo:GO_0043392c

regulation of DNA bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0051101
Super-classes obo:GO_0051098c
Restrictions obo:RO_0002211op some obo:GO_0003677c
Sub-classes obo:GO_0043392c
obo:GO_0043388c
obo:GO_2000677c

regulation of cellular component organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0051128
Super-classes obo:GO_0050794c
Restrictions obo:RO_0002211op some obo:GO_0016043c
Sub-classes obo:GO_0051130c
obo:GO_0031344c
obo:GO_0001558c
obo:GO_0051129c
obo:GO_0033043c
obo:GO_1902510c

negative regulation of cellular component organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0051129
Super-classes obo:GO_0048523c
obo:GO_0051128c
Restrictions obo:RO_0002212op some obo:GO_0016043c
Sub-classes obo:GO_0031345c
obo:GO_0010639c
obo:GO_1902511c

positive regulation of cellular component organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0051130
Super-classes obo:GO_0051128c
obo:GO_0048522c
Restrictions obo:RO_0002213op some obo:GO_0016043c
Sub-classes obo:GO_0031346c
obo:GO_1902512c
obo:GO_0010638c

regulation of nitrogen compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051171
Super-classes obo:GO_0019222c
Restrictions obo:RO_0002211op some obo:GO_0006807c
Sub-classes obo:GO_0051246c
obo:GO_0051173c
obo:GO_0019219c
obo:GO_0034248c
obo:GO_0051172c

negative regulation of nitrogen compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051172
Super-classes obo:GO_0009892c
obo:GO_0051171c
Restrictions obo:RO_0002212op some obo:GO_0006807c
Sub-classes obo:GO_0045934c
obo:GO_0034249c
obo:GO_0051248c

positive regulation of nitrogen compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051173
Super-classes obo:GO_0051171c
obo:GO_0009893c
Restrictions obo:RO_0002213op some obo:GO_0006807c
Sub-classes obo:GO_0045935c
obo:GO_0034250c
obo:GO_0051247c

localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0051179
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0051234c
obo:GO_0051641c
obo:GO_0051674c
obo:GO_0033036c

positive regulation of protein transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0051222
Super-classes obo:GO_1904951c
obo:GO_0051050c
obo:GO_0051223c
Restrictions obo:RO_0002213op some obo:GO_0015031c
Sub-classes obo:GO_0050714c

regulation of protein transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0051223
Super-classes obo:GO_0070201c
obo:GO_0090087c
Restrictions obo:RO_0002211op some obo:GO_0015031c
Sub-classes obo:GO_0050708c
obo:GO_0051224c
obo:GO_0051222c

negative regulation of protein transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0051224
Super-classes obo:GO_0051223c
obo:GO_1904950c
obo:GO_0051051c
Restrictions obo:RO_0002212op some obo:GO_0015031c
Sub-classes obo:GO_0050709c

establishment of localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0051234
Super-classes obo:GO_0051179c
Sub-classes obo:GO_0006810c
obo:GO_0045184c

regulation of multicellular organismal processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051239
Super-classes obo:GO_0050789c
Restrictions obo:RO_0002211op some obo:GO_0032501c
Sub-classes obo:GO_0051241c
obo:GO_0051240c
obo:GO_0001817c

positive regulation of multicellular organismal processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051240
Super-classes obo:GO_0048518c
obo:GO_0051239c
Restrictions obo:RO_0002213op some obo:GO_0032501c
Sub-classes obo:GO_0001819c

negative regulation of multicellular organismal processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051241
Super-classes obo:GO_0051239c
obo:GO_0048519c
Restrictions obo:RO_0002212op some obo:GO_0032501c
Sub-classes obo:GO_0001818c

regulation of protein metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051246
Super-classes obo:GO_0051171c
obo:GO_0080090c
obo:GO_0060255c
Restrictions obo:RO_0002211op some obo:GO_0019538c
Sub-classes obo:GO_0051248c
obo:GO_0032268c
obo:GO_0051247c

positive regulation of protein metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051247
Super-classes obo:GO_0051173c
obo:GO_0010604c
obo:GO_0051246c
Restrictions obo:RO_0002213op some obo:GO_0019538c
Sub-classes obo:GO_0032270c

negative regulation of protein metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051248
Super-classes obo:GO_0051246c
obo:GO_0051172c
obo:GO_0010605c
Restrictions obo:RO_0002212op some obo:GO_0019538c
Sub-classes obo:GO_0032269c

regulation of RNA metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051252
Super-classes obo:GO_0019219c
obo:GO_0060255c
Restrictions obo:RO_0002211op some obo:GO_0016070c
Sub-classes obo:GO_2001141c
obo:GO_0051254c
obo:GO_0051253c

negative regulation of RNA metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051253
Super-classes obo:GO_0010605c
obo:GO_0045934c
obo:GO_0051252c
Restrictions obo:RO_0002212op some obo:GO_0016070c
Sub-classes obo:GO_1902679c

positive regulation of RNA metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051254
Super-classes obo:GO_0051252c
obo:GO_0010604c
obo:GO_0045935c
Restrictions obo:RO_0002213op some obo:GO_0016070c
Sub-classes obo:GO_1902680c

regulation of cellular component movementc # Classes

URI http://purl.obolibrary.org/obo/GO_0051270
Super-classes obo:GO_0032879c
obo:GO_0050794c
Restrictions obo:RO_0002211op some obo:GO_0006928c
Sub-classes obo:GO_0051272c
obo:GO_0051271c
obo:GO_2000145c

negative regulation of cellular component movementc # Classes

URI http://purl.obolibrary.org/obo/GO_0051271
Super-classes obo:GO_0048523c
obo:GO_0051270c
Restrictions obo:RO_0002212op some obo:GO_0006928c
Sub-classes obo:GO_2000146c

positive regulation of cellular component movementc # Classes

URI http://purl.obolibrary.org/obo/GO_0051272
Super-classes obo:GO_0051270c
obo:GO_0048522c
Restrictions obo:RO_0002213op some obo:GO_0006928c
Sub-classes obo:GO_2000147c

chromosome organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0051276
Super-classes obo:GO_0006996c

regulation of hydrolase activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0051336
Super-classes obo:GO_0050790c
Restrictions obo:RO_0002211op some obo:GO_0016787c
Sub-classes obo:GO_0032069c
obo:GO_0051346c
obo:GO_0051345c

positive regulation of hydrolase activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0051345
Super-classes obo:GO_0043085c
obo:GO_0051336c
Restrictions obo:RO_0002213op some obo:GO_0016787c
Sub-classes obo:GO_0032075c

negative regulation of hydrolase activityc # Classes

URI http://purl.obolibrary.org/obo/GO_0051346
Super-classes obo:GO_0051336c
obo:GO_0043086c
Restrictions obo:RO_0002212op some obo:GO_0016787c
Sub-classes obo:GO_0032074c

cellular localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0051641
Super-classes obo:GO_0051179c
Sub-classes obo:GO_0070727c

localization of cellc # Classes

URI http://purl.obolibrary.org/obo/GO_0051674
Super-classes obo:GO_0051179c

multi-organism processc # Classes

URI http://purl.obolibrary.org/obo/GO_0051704
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0044764c

cellular response to stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0051716
Super-classes obo:GO_0050896c
obo:GO_0009987c
Sub-classes obo:GO_0070887c
obo:GO_0033554c

transmembrane transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0055085
Super-classes obo:GO_0006810c
Sub-classes obo:GO_0034220c

regulation of posttranscriptional gene silencingc # Classes

URI http://purl.obolibrary.org/obo/GO_0060147
Super-classes obo:GO_0060968c
Restrictions obo:RO_0002211op some obo:GO_0016441c
Sub-classes obo:GO_0060148c
obo:GO_1900368c
obo:GO_0060149c

positive regulation of posttranscriptional gene silencingc # Classes

URI http://purl.obolibrary.org/obo/GO_0060148
Super-classes obo:GO_0060147c
obo:GO_0048522c
Restrictions obo:RO_0002213op some obo:GO_0016441c
Sub-classes obo:GO_1900370c

negative regulation of posttranscriptional gene silencingc # Classes

URI http://purl.obolibrary.org/obo/GO_0060149
Super-classes obo:GO_0060969c
obo:GO_0060147c
Restrictions obo:RO_0002212op some obo:GO_0016441c
Sub-classes obo:GO_1900369c

regulation of antisense RNA transcriptionc # Classes

URI http://purl.obolibrary.org/obo/GO_0060194
Super-classes obo:GO_0006355c
Restrictions obo:RO_0002211op some obo:GO_0009300c
Sub-classes obo:GO_0060196c
obo:GO_0060195c

negative regulation of antisense RNA transcriptionc # Classes

URI http://purl.obolibrary.org/obo/GO_0060195
Super-classes obo:GO_0045892c
obo:GO_0060194c
Restrictions obo:RO_0002212op some obo:GO_0009300c

positive regulation of antisense RNA transcriptionc # Classes

URI http://purl.obolibrary.org/obo/GO_0060196
Super-classes obo:GO_0045893c
obo:GO_0060194c
Restrictions obo:RO_0002213op some obo:GO_0009300c

regulation of macromolecule metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0060255
Super-classes obo:GO_0019222c
Restrictions obo:RO_0002211op some obo:GO_0043170c
Sub-classes obo:GO_0010556c
obo:GO_0010468c
obo:GO_0032069c
obo:GO_0051246c
obo:GO_0051252c
obo:GO_0010605c
obo:GO_0051052c
obo:GO_0010604c

cell chemotaxisc # Classes

URI http://purl.obolibrary.org/obo/GO_0060326
Super-classes obo:GO_0016477c
obo:GO_0006935c
Restrictions obo:BFO_0000050op some obo:GO_0070887c

regulation of cellular localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0060341
Super-classes obo:GO_0032879c
Restrictions obo:RO_0002211op some obo:GO_0051641c
Sub-classes obo:GO_1903827c

cell adhesion molecule productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0060352
Super-classes obo:GO_0009987c

regulation of cell adhesion molecule productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0060353
Super-classes obo:GO_0050794c
Restrictions obo:RO_0002211op some obo:GO_0060352c
Sub-classes obo:GO_0060355c
obo:GO_0060354c

negative regulation of cell adhesion molecule productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0060354
Super-classes obo:GO_0048523c
obo:GO_0060353c
Restrictions obo:RO_0002212op some obo:GO_0060352c

positive regulation of cell adhesion molecule productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0060355
Super-classes obo:GO_0048522c
obo:GO_0060353c
Restrictions obo:RO_0002213op some obo:GO_0060352c

regulation of cell projection assemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_0060491
Super-classes obo:GO_0031344c
obo:GO_0044087c
Restrictions obo:RO_0002211op some obo:GO_0030031c
Sub-classes obo:GO_0120032c

negative regulation of cell deathc # Classes

URI http://purl.obolibrary.org/obo/GO_0060548
Super-classes obo:GO_0010941c
obo:GO_0048523c
Restrictions obo:RO_0002212op some obo:GO_0008219c
Sub-classes obo:GO_0043069c

apoptotic process involved in morphogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_0060561
Super-classes obo:GO_1902742c
Restrictions obo:BFO_0000050op some obo:GO_0009653c

regulation of gene silencing by RNAc # Classes

URI http://purl.obolibrary.org/obo/GO_0060966
Super-classes obo:GO_0060968c
Restrictions obo:RO_0002211op some obo:GO_0031047c
Sub-classes obo:GO_1900368c
obo:GO_0060967c

negative regulation of gene silencing by RNAc # Classes

URI http://purl.obolibrary.org/obo/GO_0060967
Super-classes obo:GO_0060969c
obo:GO_0060966c
Restrictions obo:RO_0002212op some obo:GO_0031047c
Sub-classes obo:GO_1900369c

regulation of gene silencingc # Classes

URI http://purl.obolibrary.org/obo/GO_0060968
Super-classes obo:GO_0050794c
obo:GO_0010468c
Restrictions obo:RO_0002211op some obo:GO_0016458c
Sub-classes obo:GO_0060966c
obo:GO_0060969c
obo:GO_0060147c

negative regulation of gene silencingc # Classes

URI http://purl.obolibrary.org/obo/GO_0060969
Super-classes obo:GO_0048523c
obo:GO_0010628c
obo:GO_0060968c
Restrictions obo:RO_0002212op some obo:GO_0016458c
Sub-classes obo:GO_0060967c
obo:GO_0060149c

regulation of wound healingc # Classes

URI http://purl.obolibrary.org/obo/GO_0061041
Super-classes obo:GO_1903034c
Restrictions obo:RO_0002211op some obo:GO_0042060c
Sub-classes obo:GO_0061045c
obo:GO_0090303c

negative regulation of wound healingc # Classes

URI http://purl.obolibrary.org/obo/GO_0061045
Super-classes obo:GO_0061041c
obo:GO_1903035c
obo:GO_0032102c
Restrictions obo:RO_0002212op some obo:GO_0042060c

response to platelet aggregation inhibitorc # Classes

URI http://purl.obolibrary.org/obo/GO_0061478
Super-classes obo:GO_0042493c
Sub-classes obo:GO_1901328c

biological regulationc # Classes

URI http://purl.obolibrary.org/obo/GO_0065007
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0065008c
obo:GO_0050789c
obo:GO_0065009c

regulation of biological qualityc # Classes

URI http://purl.obolibrary.org/obo/GO_0065008
Super-classes obo:GO_0065007c
Sub-classes obo:GO_0042391c

regulation of molecular functionc # Classes

URI http://purl.obolibrary.org/obo/GO_0065009
Super-classes obo:GO_0065007c
Restrictions obo:RO_0002211op some obo:GO_0003674c
Sub-classes obo:GO_0032409c
obo:GO_0051098c
obo:GO_0044092c
obo:GO_0044093c
obo:GO_0050790c

regulation of establishment of protein localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0070201
Super-classes obo:GO_0032880c
Restrictions obo:RO_0002211op some obo:GO_0045184c
Sub-classes obo:GO_0051223c
obo:GO_1904950c
obo:GO_1904951c

negative regulation of translation involved in RNA interferencec # Classes

URI http://purl.obolibrary.org/obo/GO_0070549
Super-classes obo:GO_0040033c
Restrictions obo:BFO_0000050op some obo:GO_0016246c

cellular macromolecule localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0070727
Super-classes obo:GO_0033036c
obo:GO_0051641c
Sub-classes obo:GO_0034613c

cellular response to chemical stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0070887
Super-classes obo:GO_0051716c
obo:GO_0042221c
Sub-classes obo:GO_1901701c
obo:GO_0071310c
obo:GO_0097237c
obo:GO_0035690c
obo:GO_1901699c

cellular response to organic substancec # Classes

URI http://purl.obolibrary.org/obo/GO_0071310
Super-classes obo:GO_0070887c
obo:GO_0010033c
Sub-classes obo:GO_0071407c
obo:GO_0071417c

cellular response to organic cyclic compoundc # Classes

URI http://purl.obolibrary.org/obo/GO_0071407
Super-classes obo:GO_0014070c
obo:GO_0071310c
Sub-classes obo:GO_0072749c

cellular response to organonitrogen compoundc # Classes

URI http://purl.obolibrary.org/obo/GO_0071417
Super-classes obo:GO_1901699c
obo:GO_0071495c
obo:GO_0010243c
obo:GO_0071310c
Sub-classes obo:GO_0072749c

cellular response to endogenous stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_0071495
Super-classes obo:GO_0009719c
Sub-classes obo:GO_0071417c

protein localization to extracellular regionc # Classes

URI http://purl.obolibrary.org/obo/GO_0071692
Super-classes obo:GO_0008104c
Sub-classes obo:GO_0035592c

organic substance transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0071702
Super-classes obo:GO_0006810c
Sub-classes obo:GO_1901571c
obo:GO_0015833c
obo:GO_0015849c
obo:GO_0006869c
obo:GO_0015711c

organic substance metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0071704
Super-classes obo:GO_0008152c
Sub-classes obo:GO_1901564c
obo:GO_0043170c
obo:GO_1901575c
obo:GO_1901576c
obo:GO_1901360c

nitrogen compound transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0071705
Super-classes obo:GO_0006810c
Sub-classes obo:GO_0042886c

tumor necrosis factor superfamily cytokine productionc # Classes

URI http://purl.obolibrary.org/obo/GO_0071706
Super-classes obo:GO_0001816c
Sub-classes obo:GO_0032640c

icosanoid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0071715
Super-classes obo:GO_0046942c
obo:GO_1901571c
Sub-classes obo:GO_0032309c
obo:GO_1903963c

cellular component organization or biogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_0071840
Super-classes obo:GO_0008150c
Sub-classes obo:GO_0044085c
obo:GO_0016043c

DNA biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0071897
Super-classes obo:GO_0034645c
obo:GO_0034654c
obo:GO_0006259c
Sub-classes obo:GO_0090592c

cellular response to cytochalasin Bc # Classes

URI http://purl.obolibrary.org/obo/GO_0072749
Super-classes obo:GO_0071417c
obo:GO_1901328c
obo:GO_1901701c
obo:GO_0071407c
obo:GO_0036146c
obo:GO_0035690c

regulation of primary metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0080090
Super-classes obo:GO_0019222c
Restrictions obo:RO_0002211op some obo:GO_0044238c
Sub-classes obo:GO_0051246c
obo:GO_0019219c

regulation of response to stressc # Classes

URI http://purl.obolibrary.org/obo/GO_0080134
Super-classes obo:GO_0048583c
Restrictions obo:RO_0002211op some obo:GO_0006950c
Sub-classes obo:GO_0080135c
obo:GO_1903034c

regulation of cellular response to stressc # Classes

URI http://purl.obolibrary.org/obo/GO_0080135
Super-classes obo:GO_0050794c
obo:GO_0080134c
Restrictions obo:RO_0002211op some obo:GO_0033554c
Sub-classes obo:GO_2001020c

regulation of peptide transportc # Classes

URI http://purl.obolibrary.org/obo/GO_0090087
Super-classes obo:GO_0051049c
Restrictions obo:RO_0002211op some obo:GO_0015833c
Sub-classes obo:GO_0051223c
obo:GO_0002791c

regulation of arachidonic acid secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0090237
Super-classes obo:GO_0032303c
Restrictions obo:RO_0002211op some obo:GO_0050482c
Sub-classes obo:GO_0090238c
obo:GO_1900139c

positive regulation of arachidonic acid secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_0090238
Super-classes obo:GO_0090237c
obo:GO_0032305c
Restrictions obo:RO_0002213op some obo:GO_0050482c

positive regulation of wound healingc # Classes

URI http://purl.obolibrary.org/obo/GO_0090303
Super-classes obo:GO_0061041c
obo:GO_1903036c
Restrictions obo:RO_0002213op some obo:GO_0042060c

nucleic acid metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_0090304
Super-classes obo:GO_0006139c
obo:GO_0043170c
Sub-classes obo:GO_0090305c
obo:GO_0016070c
obo:GO_0006259c

nucleic acid phosphodiester bond hydrolysisc # Classes

URI http://purl.obolibrary.org/obo/GO_0090305
Super-classes obo:GO_0090304c
Sub-classes obo:GO_0000737c

regulation of cell agingc # Classes

URI http://purl.obolibrary.org/obo/GO_0090342
Super-classes obo:GO_0050794c
obo:GO_0050793c
Restrictions obo:RO_0002211op some obo:GO_0007569c
Sub-classes obo:GO_0090343c
obo:GO_0090344c

positive regulation of cell agingc # Classes

URI http://purl.obolibrary.org/obo/GO_0090343
Super-classes obo:GO_0090342c
obo:GO_0048522c
obo:GO_0051094c
Restrictions obo:RO_0002213op some obo:GO_0007569c

negative regulation of cell agingc # Classes

URI http://purl.obolibrary.org/obo/GO_0090344
Super-classes obo:GO_0090342c
obo:GO_0051093c
obo:GO_0048523c
Restrictions obo:RO_0002212op some obo:GO_0007569c

DNA synthesis involved in DNA replicationc # Classes

URI http://purl.obolibrary.org/obo/GO_0090592
Super-classes obo:GO_0071897c
Restrictions obo:BFO_0000050op some obo:GO_0006260c

organic cyclic compound bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0097159
Super-classes obo:GO_0005488c
Sub-classes obo:GO_0003676c
obo:GO_0001882c

execution phase of apoptosisc # Classes

URI http://purl.obolibrary.org/obo/GO_0097194
Super-classes obo:GO_0009987c
Restrictions obo:BFO_0000050op some obo:GO_0006915c
obo:BFO_0000051op some obo:GO_0032060c

cellular response to toxic substancec # Classes

URI http://purl.obolibrary.org/obo/GO_0097237
Super-classes obo:GO_0070887c
obo:GO_0009636c
Sub-classes obo:GO_0036146c

carbohydrate derivative bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_0097367
Super-classes obo:GO_0005488c
Sub-classes obo:GO_0001882c

neuron partc # Classes

URI http://purl.obolibrary.org/obo/GO_0097458
Super-classes obo:GO_0005575c

nucleic acid-templated transcriptionc # Classes

URI http://purl.obolibrary.org/obo/GO_0097659
Super-classes obo:GO_0032774c
Sub-classes obo:GO_0006351c

regulation of action potentialc # Classes

URI http://purl.obolibrary.org/obo/GO_0098900
Super-classes obo:GO_0050789c
obo:GO_0042391c
Restrictions obo:RO_0002211op some obo:GO_0001508c
Sub-classes obo:GO_0045759c
obo:GO_0045760c

plasma membrane bounded cell projection assemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_0120031
Super-classes obo:GO_0120036c
obo:GO_0030031c
Sub-classes obo:GO_0032060c

regulation of plasma membrane bounded cell projection assemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_0120032
Super-classes obo:GO_0060491c
obo:GO_0120035c
Restrictions obo:RO_0002211op some obo:GO_0120031c
Sub-classes obo:GO_0120034c
obo:GO_0120033c
obo:GO_1904170c

negative regulation of plasma membrane bounded cell projection assemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_0120033
Super-classes obo:GO_0031345c
obo:GO_0120032c
Restrictions obo:RO_0002212op some obo:GO_0120031c
Sub-classes obo:GO_1904171c

positive regulation of plasma membrane bounded cell projection assemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_0120034
Super-classes obo:GO_0120032c
obo:GO_0031346c
obo:GO_0044089c
Restrictions obo:RO_0002213op some obo:GO_0120031c
Sub-classes obo:GO_1904172c

regulation of plasma membrane bounded cell projection organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0120035
Super-classes obo:GO_0031344c
Restrictions obo:RO_0002211op some obo:GO_0120036c
Sub-classes obo:GO_0120032c

plasma membrane bounded cell projection organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_0120036
Super-classes obo:GO_0030030c
Sub-classes obo:GO_0120031c

catalytic activity, acting on DNAc # Classes

URI http://purl.obolibrary.org/obo/GO_0140097
Super-classes obo:GO_0003824c
Sub-classes obo:GO_0004536c

export from cellc # Classes

URI http://purl.obolibrary.org/obo/GO_0140352
Super-classes obo:GO_0006810c
obo:GO_0009987c
Sub-classes obo:GO_0032940c

regulation of execution phase of apoptosisc # Classes

URI http://purl.obolibrary.org/obo/GO_1900117
Super-classes obo:GO_0042981c
Restrictions obo:RO_0002211op some obo:GO_0097194c
Sub-classes obo:GO_1900118c
obo:GO_1900119c
obo:GO_1902510c

negative regulation of execution phase of apoptosisc # Classes

URI http://purl.obolibrary.org/obo/GO_1900118
Super-classes obo:GO_1900117c
obo:GO_0043066c
Restrictions obo:RO_0002212op some obo:GO_0097194c
Sub-classes obo:GO_1902511c

positive regulation of execution phase of apoptosisc # Classes

URI http://purl.obolibrary.org/obo/GO_1900119
Super-classes obo:GO_1900117c
obo:GO_0043065c
Restrictions obo:RO_0002213op some obo:GO_0097194c
Sub-classes obo:GO_1902512c

regulation of lipid bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_1900130
Super-classes obo:GO_0051098c
Restrictions obo:RO_0002211op some obo:GO_0008289c
Sub-classes obo:GO_1900131c
obo:GO_1900132c

negative regulation of lipid bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_1900131
Super-classes obo:GO_0051100c
obo:GO_1900130c
Restrictions obo:RO_0002212op some obo:GO_0008289c

positive regulation of lipid bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_1900132
Super-classes obo:GO_0051099c
obo:GO_1900130c
Restrictions obo:RO_0002213op some obo:GO_0008289c

negative regulation of arachidonic acid secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_1900139
Super-classes obo:GO_0032304c
obo:GO_0090237c
Restrictions obo:RO_0002212op some obo:GO_0050482c

regulation of RNA interferencec # Classes

URI http://purl.obolibrary.org/obo/GO_1900368
Super-classes obo:GO_0060147c
obo:GO_0060966c
Restrictions obo:RO_0002211op some obo:GO_0016246c
Sub-classes obo:GO_1900370c
obo:GO_1900369c

negative regulation of RNA interferencec # Classes

URI http://purl.obolibrary.org/obo/GO_1900369
Super-classes obo:GO_0060967c
obo:GO_1900368c
obo:GO_0060149c
Restrictions obo:RO_0002212op some obo:GO_0016246c

positive regulation of RNA interferencec # Classes

URI http://purl.obolibrary.org/obo/GO_1900370
Super-classes obo:GO_0060148c
obo:GO_1900368c
Restrictions obo:RO_0002213op some obo:GO_0016246c

response to cytochalasin Bc # Classes

URI http://purl.obolibrary.org/obo/GO_1901328
Super-classes obo:GO_1901700c
obo:GO_0014070c
obo:GO_0010243c
obo:GO_0061478c
obo:GO_0010046c
Sub-classes obo:GO_0072749c

organic cyclic compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1901360
Super-classes obo:GO_0071704c
Sub-classes obo:GO_1901362c
obo:GO_0006139c
obo:GO_1901361c

organic cyclic compound catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1901361
Super-classes obo:GO_1901575c
obo:GO_1901360c
Sub-classes obo:GO_0034655c

organic cyclic compound biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1901362
Super-classes obo:GO_1901360c
obo:GO_1901576c
Sub-classes obo:GO_0034654c

heterocyclic compound bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_1901363
Super-classes obo:GO_0005488c
Sub-classes obo:GO_0001882c
obo:GO_0003676c

organonitrogen compound metabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1901564
Super-classes obo:GO_0071704c
obo:GO_0006807c
Sub-classes obo:GO_1901566c
obo:GO_0019538c
obo:GO_0006518c

organonitrogen compound biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1901566
Super-classes obo:GO_1901576c
obo:GO_1901564c
Sub-classes obo:GO_0043043c

fatty acid derivative transportc # Classes

URI http://purl.obolibrary.org/obo/GO_1901571
Super-classes obo:GO_0071702c
Sub-classes obo:GO_0071715c

organic substance catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1901575
Super-classes obo:GO_0009056c
obo:GO_0071704c
Sub-classes obo:GO_0009057c
obo:GO_1901361c

organic substance biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1901576
Super-classes obo:GO_0009058c
obo:GO_0071704c
Sub-classes obo:GO_1901566c
obo:GO_1901362c
obo:GO_0009059c

response to nitrogen compoundc # Classes

URI http://purl.obolibrary.org/obo/GO_1901698
Super-classes obo:GO_0042221c
Sub-classes obo:GO_1901699c
obo:GO_0010243c

cellular response to nitrogen compoundc # Classes

URI http://purl.obolibrary.org/obo/GO_1901699
Super-classes obo:GO_1901698c
obo:GO_0070887c
Sub-classes obo:GO_0071417c

response to oxygen-containing compoundc # Classes

URI http://purl.obolibrary.org/obo/GO_1901700
Super-classes obo:GO_0042221c
Sub-classes obo:GO_1901328c
obo:GO_1901701c

cellular response to oxygen-containing compoundc # Classes

URI http://purl.obolibrary.org/obo/GO_1901701
Super-classes obo:GO_0070887c
obo:GO_1901700c
Sub-classes obo:GO_0072749c

regulation of apoptotic process involved in morphogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_1902337
Super-classes obo:GO_1904748c
obo:GO_0022603c
Restrictions obo:RO_0002211op some obo:GO_0060561c
Sub-classes obo:GO_1902338c
obo:GO_1902339c

negative regulation of apoptotic process involved in morphogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_1902338
Super-classes obo:GO_1904746c
obo:GO_1902337c
Restrictions obo:RO_0002212op some obo:GO_0060561c

positive regulation of apoptotic process involved in morphogenesisc # Classes

URI http://purl.obolibrary.org/obo/GO_1902339
Super-classes obo:GO_1904747c
obo:GO_1902337c
Restrictions obo:RO_0002213op some obo:GO_0060561c

catalytic complexc # Classes

URI http://purl.obolibrary.org/obo/GO_1902494
Super-classes obo:GO_0032991c
Sub-classes obo:GO_1990234c

regulation of apoptotic DNA fragmentationc # Classes

URI http://purl.obolibrary.org/obo/GO_1902510
Super-classes obo:GO_1903624c
obo:GO_1900117c
obo:GO_0051128c
Restrictions obo:RO_0002211op some obo:GO_0006309c
Sub-classes obo:GO_1902511c
obo:GO_1902512c

negative regulation of apoptotic DNA fragmentationc # Classes

URI http://purl.obolibrary.org/obo/GO_1902511
Super-classes obo:GO_1903625c
obo:GO_1902510c
obo:GO_1900118c
obo:GO_0051129c
Restrictions obo:RO_0002212op some obo:GO_0006309c

positive regulation of apoptotic DNA fragmentationc # Classes

URI http://purl.obolibrary.org/obo/GO_1902512
Super-classes obo:GO_0051130c
obo:GO_1903626c
obo:GO_1902510c
obo:GO_1900119c
Restrictions obo:RO_0002213op some obo:GO_0006309c

negative regulation of RNA biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1902679
Super-classes obo:GO_0051253c
obo:GO_0010558c
obo:GO_2001141c
obo:GO_0031327c
Restrictions obo:RO_0002212op some obo:GO_0032774c
Sub-classes obo:GO_1903507c

positive regulation of RNA biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1902680
Super-classes obo:GO_0051254c
obo:GO_0031328c
obo:GO_0010557c
obo:GO_2001141c
Restrictions obo:RO_0002213op some obo:GO_0032774c
Sub-classes obo:GO_1903508c

apoptotic process involved in developmentc # Classes

URI http://purl.obolibrary.org/obo/GO_1902742
Super-classes obo:GO_0006915c
Restrictions obo:BFO_0000050op some obo:GO_0048856c
Sub-classes obo:GO_0060561c

regulation of response to woundingc # Classes

URI http://purl.obolibrary.org/obo/GO_1903034
Super-classes obo:GO_0080134c
Restrictions obo:RO_0002211op some obo:GO_0009611c
Sub-classes obo:GO_1903036c
obo:GO_0061041c
obo:GO_1903035c

negative regulation of response to woundingc # Classes

URI http://purl.obolibrary.org/obo/GO_1903035
Super-classes obo:GO_0048585c
obo:GO_1903034c
Restrictions obo:RO_0002212op some obo:GO_0009611c
Sub-classes obo:GO_0061045c

positive regulation of response to woundingc # Classes

URI http://purl.obolibrary.org/obo/GO_1903036
Super-classes obo:GO_0048584c
obo:GO_1903034c
Restrictions obo:RO_0002213op some obo:GO_0009611c
Sub-classes obo:GO_0090303c

regulation of nucleus organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_1903353
Super-classes obo:GO_0033043c
Restrictions obo:RO_0002211op some obo:GO_0006997c

regulation of nucleic acid-templated transcriptionc # Classes

URI http://purl.obolibrary.org/obo/GO_1903506
Super-classes obo:GO_2001141c
Restrictions obo:RO_0002211op some obo:GO_0097659c
Sub-classes obo:GO_1903507c
obo:GO_0006355c
obo:GO_1903508c

negative regulation of nucleic acid-templated transcriptionc # Classes

URI http://purl.obolibrary.org/obo/GO_1903507
Super-classes obo:GO_1903506c
obo:GO_1902679c
Restrictions obo:RO_0002212op some obo:GO_0097659c
Sub-classes obo:GO_0045892c

positive regulation of nucleic acid-templated transcriptionc # Classes

URI http://purl.obolibrary.org/obo/GO_1903508
Super-classes obo:GO_1902680c
obo:GO_1903506c
Restrictions obo:RO_0002213op some obo:GO_0097659c
Sub-classes obo:GO_0045893c

regulation of secretion by cellc # Classes

URI http://purl.obolibrary.org/obo/GO_1903530
Super-classes obo:GO_0050794c
obo:GO_0051046c
Restrictions obo:RO_0002211op some obo:GO_0032940c
Sub-classes obo:GO_0050708c
obo:GO_1903531c
obo:GO_1903532c

negative regulation of secretion by cellc # Classes

URI http://purl.obolibrary.org/obo/GO_1903531
Super-classes obo:GO_0051048c
obo:GO_0048523c
obo:GO_1903530c
Restrictions obo:RO_0002212op some obo:GO_0032940c
Sub-classes obo:GO_0050709c

positive regulation of secretion by cellc # Classes

URI http://purl.obolibrary.org/obo/GO_1903532
Super-classes obo:GO_0048522c
obo:GO_0051047c
obo:GO_1903530c
Restrictions obo:RO_0002213op some obo:GO_0032940c
Sub-classes obo:GO_0050714c

regulation of tumor necrosis factor superfamily cytokine productionc # Classes

URI http://purl.obolibrary.org/obo/GO_1903555
Super-classes obo:GO_0001817c
Restrictions obo:RO_0002211op some obo:GO_0071706c
Sub-classes obo:GO_0032680c
obo:GO_1903557c
obo:GO_1903556c

negative regulation of tumor necrosis factor superfamily cytokine productionc # Classes

URI http://purl.obolibrary.org/obo/GO_1903556
Super-classes obo:GO_0001818c
obo:GO_1903555c
Restrictions obo:RO_0002212op some obo:GO_0071706c
Sub-classes obo:GO_0032720c

positive regulation of tumor necrosis factor superfamily cytokine productionc # Classes

URI http://purl.obolibrary.org/obo/GO_1903557
Super-classes obo:GO_0001819c
obo:GO_1903555c
Restrictions obo:RO_0002213op some obo:GO_0071706c
Sub-classes obo:GO_0032760c

regulation of DNA catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1903624
Super-classes obo:GO_0051052c
obo:GO_0031329c
Restrictions obo:RO_0002211op some obo:GO_0006308c
Sub-classes obo:GO_1903625c
obo:GO_1903626c
obo:GO_1902510c

negative regulation of DNA catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1903625
Super-classes obo:GO_0051053c
obo:GO_1903624c
obo:GO_0031330c
Restrictions obo:RO_0002212op some obo:GO_0006308c
Sub-classes obo:GO_1902511c

positive regulation of DNA catabolic processc # Classes

URI http://purl.obolibrary.org/obo/GO_1903626
Super-classes obo:GO_0051054c
obo:GO_1903624c
obo:GO_0031331c
Restrictions obo:RO_0002213op some obo:GO_0006308c
Sub-classes obo:GO_1902512c

negative regulation of anion transportc # Classes

URI http://purl.obolibrary.org/obo/GO_1903792
Super-classes obo:GO_0044070c
obo:GO_0043271c
Restrictions obo:RO_0002212op some obo:GO_0006820c
Sub-classes obo:GO_2000192c

positive regulation of anion transportc # Classes

URI http://purl.obolibrary.org/obo/GO_1903793
Super-classes obo:GO_0043270c
obo:GO_0044070c
Restrictions obo:RO_0002213op some obo:GO_0006820c
Sub-classes obo:GO_2000193c

regulation of cellular protein localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_1903827
Super-classes obo:GO_0060341c
obo:GO_0032880c
Restrictions obo:RO_0002211op some obo:GO_0034613c
Sub-classes obo:GO_1903829c
obo:GO_1903828c

negative regulation of cellular protein localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_1903828
Super-classes obo:GO_0048519c
obo:GO_1903827c
Restrictions obo:RO_0002212op some obo:GO_0034613c

positive regulation of cellular protein localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_1903829
Super-classes obo:GO_0048518c
obo:GO_1903827c
Restrictions obo:RO_0002213op some obo:GO_0034613c

arachidonate transportc # Classes

URI http://purl.obolibrary.org/obo/GO_1903963
Super-classes obo:GO_0015909c
obo:GO_0071715c
Sub-classes obo:GO_0050482c

regulation of bleb assemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_1904170
Super-classes obo:GO_0120032c
Restrictions obo:RO_0002211op some obo:GO_0032060c
Sub-classes obo:GO_1904172c
obo:GO_1904171c

negative regulation of bleb assemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_1904171
Super-classes obo:GO_0120033c
obo:GO_1904170c
Restrictions obo:RO_0002212op some obo:GO_0032060c

positive regulation of bleb assemblyc # Classes

URI http://purl.obolibrary.org/obo/GO_1904172
Super-classes obo:GO_0120034c
obo:GO_1904170c
Restrictions obo:RO_0002213op some obo:GO_0032060c

regulation of tumor necrosis factor secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_1904467
Super-classes obo:GO_0050707c
obo:GO_0032680c
Restrictions obo:RO_0002211op some obo:GO_1990774c
Sub-classes obo:GO_1904469c
obo:GO_1904468c

negative regulation of tumor necrosis factor secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_1904468
Super-classes obo:GO_0032720c
obo:GO_0050710c
obo:GO_1904467c
Restrictions obo:RO_0002212op some obo:GO_1990774c

positive regulation of tumor necrosis factor secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_1904469
Super-classes obo:GO_0050715c
obo:GO_1904467c
obo:GO_0032760c
Restrictions obo:RO_0002213op some obo:GO_1990774c

negative regulation of apoptotic process involved in developmentc # Classes

URI http://purl.obolibrary.org/obo/GO_1904746
Super-classes obo:GO_0043066c
obo:GO_1904748c
obo:GO_0051093c
Restrictions obo:RO_0002212op some obo:GO_1902742c
Sub-classes obo:GO_1902338c

positive regulation of apoptotic process involved in developmentc # Classes

URI http://purl.obolibrary.org/obo/GO_1904747
Super-classes obo:GO_1904748c
obo:GO_0043065c
obo:GO_0051094c
Restrictions obo:RO_0002213op some obo:GO_1902742c
Sub-classes obo:GO_1902339c

regulation of apoptotic process involved in developmentc # Classes

URI http://purl.obolibrary.org/obo/GO_1904748
Super-classes obo:GO_0042981c
obo:GO_0050793c
Restrictions obo:RO_0002211op some obo:GO_1902742c
Sub-classes obo:GO_1904747c
obo:GO_1904746c
obo:GO_1902337c

regulation of core promoter bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_1904796
Super-classes obo:GO_0050789c
obo:GO_2000677c
Restrictions obo:RO_0002211op some obo:GO_0001047c
Sub-classes obo:GO_1904797c
obo:GO_1904798c

negative regulation of core promoter bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_1904797
Super-classes obo:GO_2000678c
obo:GO_1904796c
obo:GO_0048519c
Restrictions obo:RO_0002212op some obo:GO_0001047c

positive regulation of core promoter bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_1904798
Super-classes obo:GO_1904796c
obo:GO_0048518c
obo:GO_2000679c
Restrictions obo:RO_0002213op some obo:GO_0001047c

negative regulation of establishment of protein localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_1904950
Super-classes obo:GO_0070201c
obo:GO_0048519c
Restrictions obo:RO_0002212op some obo:GO_0045184c
Sub-classes obo:GO_0051224c

positive regulation of establishment of protein localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_1904951
Super-classes obo:GO_0048518c
obo:GO_0070201c
Restrictions obo:RO_0002213op some obo:GO_0045184c
Sub-classes obo:GO_0051222c

negative regulation of DNA methylationc # Classes

URI http://purl.obolibrary.org/obo/GO_1905642
Super-classes obo:GO_0051053c
obo:GO_0044030c
Restrictions obo:RO_0002212op some obo:GO_0006306c

positive regulation of DNA methylationc # Classes

URI http://purl.obolibrary.org/obo/GO_1905643
Super-classes obo:GO_0051054c
obo:GO_0044030c
Restrictions obo:RO_0002213op some obo:GO_0006306c

regulation of lipid localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_1905952
Super-classes obo:GO_0032879c
Restrictions obo:RO_0002211op some obo:GO_0010876c
Sub-classes obo:GO_1905954c
obo:GO_1905953c
obo:GO_0032368c

negative regulation of lipid localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_1905953
Super-classes obo:GO_0048519c
obo:GO_1905952c
Restrictions obo:RO_0002212op some obo:GO_0010876c
Sub-classes obo:GO_0032369c

positive regulation of lipid localizationc # Classes

URI http://purl.obolibrary.org/obo/GO_1905954
Super-classes obo:GO_1905952c
obo:GO_0048518c
Restrictions obo:RO_0002213op some obo:GO_0010876c
Sub-classes obo:GO_0032370c

transferase complexc # Classes

URI http://purl.obolibrary.org/obo/GO_1990234
Super-classes obo:GO_1902494c
Sub-classes obo:GO_0034708c

tumor necrosis factor secretionc # Classes

URI http://purl.obolibrary.org/obo/GO_1990774
Super-classes obo:GO_0050663c
Restrictions obo:BFO_0000050op some obo:GO_0032640c

regulation of cellular macromolecule biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_2000112
Super-classes obo:GO_0031326c
obo:GO_0010556c
Restrictions obo:RO_0002211op some obo:GO_0034645c
Sub-classes obo:GO_0006417c
obo:GO_2000278c
obo:GO_0006275c
obo:GO_2000113c
obo:GO_0006355c

negative regulation of cellular macromolecule biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_2000113
Super-classes obo:GO_0010558c
obo:GO_0031327c
obo:GO_2000112c
Restrictions obo:RO_0002212op some obo:GO_0034645c
Sub-classes obo:GO_0008156c
obo:GO_0017148c
obo:GO_2000279c
obo:GO_0045892c

regulation of cell motilityc # Classes

URI http://purl.obolibrary.org/obo/GO_2000145
Super-classes obo:GO_0051270c
obo:GO_0040012c
Restrictions obo:RO_0002211op some obo:GO_0048870c
Sub-classes obo:GO_2000147c
obo:GO_2000146c
obo:GO_0030334c

negative regulation of cell motilityc # Classes

URI http://purl.obolibrary.org/obo/GO_2000146
Super-classes obo:GO_0040013c
obo:GO_2000145c
obo:GO_0051271c
Restrictions obo:RO_0002212op some obo:GO_0048870c
Sub-classes obo:GO_0030336c

positive regulation of cell motilityc # Classes

URI http://purl.obolibrary.org/obo/GO_2000147
Super-classes obo:GO_2000145c
obo:GO_0040017c
obo:GO_0051272c
Restrictions obo:RO_0002213op some obo:GO_0048870c
Sub-classes obo:GO_0030335c

regulation of fatty acid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_2000191
Super-classes obo:GO_0032368c
obo:GO_0044070c
obo:GO_0032890c
Restrictions obo:RO_0002211op some obo:GO_0015908c
Sub-classes obo:GO_2000193c
obo:GO_2000192c
obo:GO_0032303c

negative regulation of fatty acid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_2000192
Super-classes obo:GO_1903792c
obo:GO_2000191c
obo:GO_0032369c
obo:GO_0032891c
Restrictions obo:RO_0002212op some obo:GO_0015908c
Sub-classes obo:GO_0032304c

positive regulation of fatty acid transportc # Classes

URI http://purl.obolibrary.org/obo/GO_2000193
Super-classes obo:GO_0032892c
obo:GO_2000191c
obo:GO_1903793c
obo:GO_0032370c
Restrictions obo:RO_0002213op some obo:GO_0015908c
Sub-classes obo:GO_0032305c

regulation of DNA biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_2000278
Super-classes obo:GO_2000112c
obo:GO_0051052c
Restrictions obo:RO_0002211op some obo:GO_0071897c
Sub-classes obo:GO_2000573c
obo:GO_2000279c

negative regulation of DNA biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_2000279
Super-classes obo:GO_2000113c
obo:GO_0051053c
obo:GO_2000278c
Restrictions obo:RO_0002212op some obo:GO_0071897c

positive regulation of DNA biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_2000573
Super-classes obo:GO_0031328c
obo:GO_0051054c
obo:GO_2000278c
obo:GO_0010557c
Restrictions obo:RO_0002213op some obo:GO_0071897c

regulation of transcription regulatory region DNA bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_2000677
Super-classes obo:GO_0051101c
Restrictions obo:RO_0002211op some obo:GO_0044212c
Sub-classes obo:GO_1904796c
obo:GO_2000678c
obo:GO_2000679c

negative regulation of transcription regulatory region DNA bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_2000678
Super-classes obo:GO_2000677c
obo:GO_0043392c
Restrictions obo:RO_0002212op some obo:GO_0044212c
Sub-classes obo:GO_1904797c

positive regulation of transcription regulatory region DNA bindingc # Classes

URI http://purl.obolibrary.org/obo/GO_2000679
Super-classes obo:GO_2000677c
obo:GO_0043388c
Restrictions obo:RO_0002213op some obo:GO_0044212c
Sub-classes obo:GO_1904798c

regulation of response to DNA damage stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_2001020
Super-classes obo:GO_0080135c
Restrictions obo:RO_0002211op some obo:GO_0006974c
Sub-classes obo:GO_2001022c
obo:GO_2001021c

negative regulation of response to DNA damage stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_2001021
Super-classes obo:GO_0048585c
obo:GO_2001020c
obo:GO_0048523c
Restrictions obo:RO_0002212op some obo:GO_0006974c

positive regulation of response to DNA damage stimulusc # Classes

URI http://purl.obolibrary.org/obo/GO_2001022
Super-classes obo:GO_2001020c
obo:GO_0048584c
obo:GO_0048522c
Restrictions obo:RO_0002213op some obo:GO_0006974c

regulation of response to drugc # Classes

URI http://purl.obolibrary.org/obo/GO_2001023
Super-classes obo:GO_0048583c
Restrictions obo:RO_0002211op some obo:GO_0042493c
Sub-classes obo:GO_2001025c
obo:GO_2001038c
obo:GO_2001024c

negative regulation of response to drugc # Classes

URI http://purl.obolibrary.org/obo/GO_2001024
Super-classes obo:GO_0048585c
obo:GO_2001023c
Restrictions obo:RO_0002212op some obo:GO_0042493c
Sub-classes obo:GO_2001039c

positive regulation of response to drugc # Classes

URI http://purl.obolibrary.org/obo/GO_2001025
Super-classes obo:GO_2001023c
obo:GO_0048584c
Restrictions obo:RO_0002213op some obo:GO_0042493c
Sub-classes obo:GO_2001040c

regulation of cellular response to drugc # Classes

URI http://purl.obolibrary.org/obo/GO_2001038
Super-classes obo:GO_0050794c
obo:GO_2001023c
Restrictions obo:RO_0002211op some obo:GO_0035690c
Sub-classes obo:GO_2001040c
obo:GO_2001039c

negative regulation of cellular response to drugc # Classes

URI http://purl.obolibrary.org/obo/GO_2001039
Super-classes obo:GO_0048523c
obo:GO_2001038c
obo:GO_2001024c
Restrictions obo:RO_0002212op some obo:GO_0035690c

positive regulation of cellular response to drugc # Classes

URI http://purl.obolibrary.org/obo/GO_2001040
Super-classes obo:GO_2001025c
obo:GO_2001038c
obo:GO_0048522c
Restrictions obo:RO_0002213op some obo:GO_0035690c

regulation of RNA biosynthetic processc # Classes

URI http://purl.obolibrary.org/obo/GO_2001141
Super-classes obo:GO_0031326c
obo:GO_0051252c
obo:GO_0010556c
Restrictions obo:RO_0002211op some obo:GO_0032774c
Sub-classes obo:GO_1903506c
obo:GO_1902679c
obo:GO_1902680c

negative regulation of chromosome organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_2001251
Super-classes obo:GO_0010639c
obo:GO_0033044c
Restrictions obo:RO_0002212op some obo:GO_0051276c

positive regulation of chromosome organizationc # Classes

URI http://purl.obolibrary.org/obo/GO_2001252
Super-classes obo:GO_0033044c
obo:GO_0010638c
Restrictions obo:RO_0002213op some obo:GO_0051276c

measurement unit labelc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000003
Super-classes obo:IAO_0000009c
Sub-classes obo:UO_0000003c
obo:UO_0000002c
obo:UO_0000051c
In range of obo:IAO_0000039op

objective specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000005
Super-classes obo:IAO_0000033c
Sub-classes obo:OBI_0000806c
obo:OBI_0200166c
obo:OBI_0000456c
obo:OBI_0000684c
obo:OBI_0000441c
obo:OBI_0000015c
In domain of obo:OBI_0000833op
In range of obo:OBI_0000417op

action specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000007
Super-classes obo:IAO_0000033c

datum labelc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000009
Super-classes obo:IAO_0000030c
Sub-classes obo:IAO_0000003c

information carrierc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000015
Super-classes obo:BFO_0000019c

data itemc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000027
Super-classes obo:IAO_0000030c
Sub-classes obo:IAO_0000102c
obo:IAO_0000109c
obo:OBI_0001181c
obo:OBI_0001404c

information content entityc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000030
Super-classes obo:BFO_0000031c
Restrictions obo:IAO_0000136op some obo:BFO_0000001c
Sub-classes obo:IAO_0000027c
obo:IAO_0000009c
obo:IAO_0000033c
obo:IAO_0000308c
obo:ECO_0000006c
obo:OBI_0001933c
In domain of obo:IAO_0000136op
obo:OBI_0001938op

scalar measurement datumc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000032
Super-classes obo:IAO_0000109c
Restrictions obo:IAO_0000004fp min 1
obo:OBI_0001938op some obo:OBI_0001931c
obo:IAO_0000039op min 1
Sub-classes obo:OBI_0001180c
obo:OBI_0001191c
obo:OBI_0001554c
obo:IAO_0000414c
obo:IAO_0000416c
In domain of obo:IAO_0000004fp

directive information entityc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000033
Super-classes obo:IAO_0000030c
Restrictions obo:IAO_0000136op some obo:BFO_0000017c
Sub-classes obo:IAO_0000007c
obo:IAO_0000005c
obo:IAO_0000104c
obo:OBI_0000750c

graphc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000038
Super-classes obo:IAO_0000309c
Sub-classes obo:IAO_0000573c

algorithmc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000064
Super-classes obo:IAO_0000104c

curation status specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000078
Super-classes obo:IAO_0000102c

imagec # Classes

URI http://purl.obolibrary.org/obo/IAO_0000101
Super-classes obo:IAO_0000308c

data about an ontology partc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000102
Super-classes obo:IAO_0000027c
Sub-classes oboInOwl:Subsetc
obo:IAO_0000409c
obo:IAO_0000078c
obo:IAO_0000225c

plan specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000104
Super-classes obo:IAO_0000033c
Restrictions obo:BFO_0000051op some obo:IAO_0000005c
obo:BFO_0000051op some obo:IAO_0000007c
Sub-classes obo:OBI_0500000c
obo:OBI_0000272c
obo:IAO_0000064c

measurement datumc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000109
Super-classes obo:IAO_0000027c
Restrictions obo:OBI_0001938op some obo:OBI_0001933c
Sub-classes obo:OBI_0001155c
obo:OBI_0000789c
obo:IAO_0000032c
In domain of obo:IAO_0000221op

material information bearerc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000178
Super-classes obo:BFO_0000040c

obsolescence reason specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000225
Super-classes obo:IAO_0000102c

figurec # Classes

URI http://purl.obolibrary.org/obo/IAO_0000308
Super-classes obo:IAO_0000030c
Sub-classes obo:IAO_0000101c
obo:IAO_0000309c

diagramc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000309
Super-classes obo:IAO_0000308c
Sub-classes obo:IAO_0000038c

denotator typec # Classes

URI http://purl.obolibrary.org/obo/IAO_0000409
Super-classes obo:IAO_0000102c

mass measurement datumc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000414
Super-classes (n6d93943533d34a84b8c3678390dd5edfb8001c and n6d93943533d34a84b8c3678390dd5edfb8002c)
obo:IAO_0000032c

time measurement datumc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000416
Super-classes (n6d93943533d34a84b8c3678390dd5edfb8006c and n6d93943533d34a84b8c3678390dd5edfb8007c)
obo:IAO_0000032c
Sub-classes obo:OBI_0001171c
In domain of obo:IAO_0000413op

line graphc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000573
Super-classes obo:IAO_0000038c
Sub-classes obo:OBI_0001172c

infectionc # Classes

URI http://purl.obolibrary.org/obo/IDO_0000586
Super-classes obo:BFO_0000040c

Virusesc # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_10239
Super-classes obo:OBI_0100026c

Euteleostomic # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_117571
Super-classes obo:NCBITaxon_7742c
Sub-classes obo:NCBITaxon_32523c

Bacteriac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_2
Super-classes obo:OBI_0100026c

Archaeac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_2157
Super-classes obo:OBI_0100026c

Eukaryotac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_2759
Super-classes obo:OBI_0100026c
Sub-classes obo:NCBITaxon_33154c

Euarchontogliresc # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_314146
Super-classes obo:NCBITaxon_40674c
Sub-classes obo:NCBITaxon_9606c

Tetrapodac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_32523
Super-classes obo:NCBITaxon_117571c
Sub-classes obo:NCBITaxon_32524c

Amniotac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_32524
Super-classes obo:NCBITaxon_32523c
Sub-classes obo:NCBITaxon_40674c

Opisthokontac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_33154
Super-classes obo:NCBITaxon_2759c
Sub-classes obo:NCBITaxon_33213c

Bilateriac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_33213
Super-classes obo:NCBITaxon_33154c
Sub-classes obo:NCBITaxon_7742c

Mammaliac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_40674
Super-classes obo:NCBITaxon_32524c
Sub-classes obo:NCBITaxon_314146c

Vertebrata c # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_7742
Super-classes obo:NCBITaxon_33213c
Sub-classes obo:NCBITaxon_117571c

Homo sapiensc # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_9606
Super-classes obo:NCBITaxon_314146c

planned processc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000011
Super-classes obo:BFO_0000015c
Sub-classes obo:OBI_0000659c
obo:OBI_0000471c
obo:OBI_0000838c
obo:OBI_0000931c
obo:OBI_0000070c
obo:OBI_0001007c
obo:OBI_0000807c
obo:OBI_0000094c
obo:OBI_0200000c
In domain of obo:OBI_0000417op
obo:OBI_0000299op
obo:OBI_0000293op
In range of obo:OBI_0000295op
obo:OBI_0000833op
obo:OBI_0000312op

biological feature identification objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000015
Super-classes obo:IAO_0000005c
Sub-classes obo:OBI_0001691c
obo:OBI_0000113c
obo:OBI_0000268c
obo:OBI_0000131c
obo:OBI_0000219c

reference substance rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000025
Super-classes obo:BFO_0000023c
Restrictions obo:RO_0000052op some obo:BFO_0000040c
Sub-classes obo:OBI_0000409c
obo:OBI_0000064c

chromatography columnc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000038
Super-classes obo:OBI_0000932c
Restrictions obo:BFO_0000051op some obo:OBI_0000967c
obo:RO_0000085op some (obo:OBI_0000372c and n6d93943533d34a84b8c3678390dd5edfb8017c)
Sub-classes obo:OBI_0000618c
obo:OBI_0000533c

xenotransplantationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000043
Super-classes obo:OBI_0000105c

processed materialc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000047
Super-classes obo:BFO_0000040c
Sub-classes obo:OBI_0000953c
obo:OBI_0000737c
obo:OBI_0000079c
obo:OBI_0100060c
obo:OBI_0000968c
obo:OBI_0000736c
obo:OBI_0000423c
obo:OBI_0000432c
obo:OBI_0000731c
obo:OBI_0000809c
obo:OBI_0000439c
obo:OBI_0001936c
obo:OBI_0000318c
obo:OBI_0001879c
obo:CL_0000578c
obo:OBI_0100066c
obo:OBI_0100010c
obo:OBI_0001912c
obo:OBI_0001633c
obo:OBI_0001151c
obo:OBI_0000722c

chromatography devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000048
Super-classes obo:OBI_0000932c
obo:OBI_0000832c
obo:OBI_0002089c
Restrictions obo:RO_0000085op some obo:OBI_0000401c
obo:RO_0000085op some obo:OBI_0000372c
obo:RO_0000085op some obo:OBI_0000453c
obo:RO_0000085op some obo:OBI_0000370c
Sub-classes obo:OBI_0001139c
obo:OBI_0000601c

mass spectrometerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000049
Super-classes (n6d93943533d34a84b8c3678390dd5edfb8029c and n6d93943533d34a84b8c3678390dd5edfb8030c and n6d93943533d34a84b8c3678390dd5edfb8031c)
obo:OBI_0000832c
Restrictions obo:RO_0000085op some obo:OBI_0000453c
obo:OBI_0000647op some (obo:NCBITaxon_9606c or obo:OBI_0000245c)
obo:RO_0000053op some obo:OBI_0000654c

allotransplantationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000057
Super-classes obo:OBI_0000105c

positive reference substance rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000064
Super-classes obo:OBI_0000025c
Restrictions obo:BFO_0000054op only obo:OBI_0000070c
Sub-classes obo:OBI_0001955c

evaluant rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000067
Super-classes obo:BFO_0000023c
Restrictions obo:BFO_0000054op only obo:OBI_0000070c
obo:RO_0000052op some obo:BFO_0000040c

assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000070
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000293op some (obo:IAO_0000027c and n6d93943533d34a84b8c3678390dd5edfb8052c and obo:BFO_0000040c and n6d93943533d34a84b8c3678390dd5edfb8047c)
obo:BFO_0000055op some obo:OBI_0000067c
obo:OBI_0000299op some (obo:IAO_0000027c and n6d93943533d34a84b8c3678390dd5edfb8052c and obo:BFO_0000040c and n6d93943533d34a84b8c3678390dd5edfb8047c)
Sub-classes obo:OBI_0000443c
obo:OBI_0001684c
obo:OBI_0000454c
obo:OBI_0600020c
obo:OBI_0000288c
obo:OBI_0000699c
obo:OBI_0001689c
obo:OBI_0001670c
obo:OBI_0000893c
obo:OBI_0001672c
obo:OBI_0000185c
obo:OBI_0000966c
obo:OBI_0000201c
obo:OBI_0600047c
obo:OBI_0002165c
obo:OBI_0002438c
obo:OBI_0001501c
obo:OBI_0001954c
obo:OBI_0000623c
obo:OBI_0001977c
obo:OBI_0000424c
obo:OBI_0000964c
obo:OBI_0001146c
obo:OBI_0000447c
obo:OBI_0000630c
obo:OBI_0002436c
obo:OBI_0600017c
obo:OBI_0002020c
obo:OBI_0000913c
obo:OBI_0002621c
obo:OBI_0000978c
obo:OBI_0002176c
obo:OBI_0002082c
obo:OBI_0000366c
obo:OBI_0600045c
obo:OBI_0001686c
obo:OBI_0000470c
obo:OBI_0600025c

culture mediumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000079
Super-classes obo:OBI_0000047c

reagent rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000086
Super-classes obo:BFO_0000023c

material processingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000094
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000293op only obo:BFO_0000040c
obo:OBI_0000299op some obo:OBI_0000047c
Sub-classes obo:OBI_0302903c
obo:OBI_0302890c
obo:OBI_0600036c
obo:OBI_0600014c
obo:OBI_0000153c
obo:OBI_0000800c
obo:OBI_0600033c
obo:OBI_0001480c
obo:OBI_0000105c
obo:OBI_0000711c
obo:OBI_0001147c
obo:OBI_0000341c
obo:OBI_0600038c
obo:OBI_0600028c
obo:OBI_0600058c
obo:OBI_0000231c
obo:OBI_0302887c
obo:OBI_0600064c
obo:OBI_0000253c
obo:OBI_0600054c
obo:OBI_0302892c
obo:OBI_0600043c
obo:OBI_0302905c
obo:OBI_0000652c

participant under investigation rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000097
Super-classes obo:BFO_0000023c
Restrictions obo:BFO_0000054op only obo:OBI_0000471c

transplantationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000105
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000417op some obo:OBI_0000456c
Sub-classes obo:OBI_0000043c
obo:OBI_0000057c

specimen rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000112
Super-classes obo:BFO_0000023c
Restrictions obo:RO_0000052op some (obo:BFO_0000040c and n6d93943533d34a84b8c3678390dd5edfb8067c)
Sub-classes obo:OBI_0000740c

sequence feature identification objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000113
Super-classes obo:OBI_0000015c
Sub-classes obo:OBI_0001398c

intervention designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000115
Super-classes obo:OBI_0500000c
Sub-classes obo:OBI_0001396c
obo:OBI_0001358c
obo:OBI_0000985c
obo:OBI_0001460c

molecular feature identification objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000131
Super-classes obo:OBI_0000015c
Sub-classes obo:OBI_0001917c
obo:OBI_0001234c
obo:OBI_0001331c

filter paperc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000151
Super-classes obo:OBI_0000932c
Restrictions obo:RO_0000085op some obo:OBI_0000378c

cell co-culturingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000153
Super-classes obo:OBI_0000094c
(n6d93943533d34a84b8c3678390dd5edfb8080c and n6d93943533d34a84b8c3678390dd5edfb8081c)
Restrictions obo:OBI_0000293op some obo:OBI_0000079c
obo:OBI_0000299op some obo:OBI_0100060c
obo:OBI_0000417op some obo:OBI_0000456c

cDNA libraryc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000164
Super-classes obo:OBI_0000731c
Restrictions obo:OBI_0000643op some obo:OBI_0000731c
obo:OBI_0000312op some obo:OBI_0600064c

imaging assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000185
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some obo:IAO_0000101c
Sub-classes obo:OBI_0002119c

microtiter platec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000192
Super-classes obo:OBI_0000967c
Restrictions obo:RO_0000085op some obo:OBI_0000370c

chromatin immunoprecipitationc # Classes

URI http://purl.obolibrary.org/obo/OBI_00001975
Super-classes obo:OBI_0000690c

radioactivity detectionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000201
Super-classes obo:OBI_0000070c

cellular feature identification objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000219
Super-classes obo:OBI_0000015c

enzymatic cleavagec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000231
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000293op some obo:OBI_0100051c
obo:OBI_0000417op some obo:OBI_0000456c
obo:BFO_0000055op some (obo:BFO_0000034c and n6d93943533d34a84b8c3678390dd5edfb8108c)
Sub-classes obo:OBI_0600050c
obo:OBI_0600055c

organizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000245
Super-classes obo:BFO_0000040c

dye rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000250
Super-classes obo:REO_0000171c

artificially induced nucleic acid hybridizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000253
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000417op some obo:OBI_0000456c
Sub-classes obo:OBI_0002447c
obo:OBI_0002448c

DNA extractionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000257
Super-classes obo:OBI_0666667c
Restrictions obo:OBI_0000299op some obo:CHEBI_16991c

organism feature identification objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000268
Super-classes obo:OBI_0000015c

protocolc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000272
Super-classes obo:IAO_0000104c

adding a material entity into a targetc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000274
Super-classes obo:OBI_0000652c
Restrictions obo:BFO_0000055op some obo:OBI_0000444c
obo:OBI_0000299op some (obo:BFO_0000040c and n6d93943533d34a84b8c3678390dd5edfb8119c and n6d93943533d34a84b8c3678390dd5edfb8120c)
obo:BFO_0000055op some obo:OBI_0000319c
Sub-classes obo:OBI_0600000c
obo:OBI_0600007c

analyte rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000275
Super-classes obo:OBI_0002444c
Restrictions obo:RO_0000081op some (obo:CHEBI_23367c or obo:CHEBI_33250c)

protein-protein interaction detection assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000288
Super-classes obo:OBI_0000070c

eluatec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000318
Super-classes obo:OBI_0000047c
Restrictions obo:BFO_0000051op some (obo:CHEBI_23367c and n6d93943533d34a84b8c3678390dd5edfb8142c)
obo:OBI_0000312op some obo:OBI_0302905c

material to be added rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000319
Super-classes obo:BFO_0000023c
Sub-classes obo:OBI_0000411c

histological sample preparationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000341
Super-classes obo:OBI_0000659c
obo:OBI_0000094c
Restrictions obo:OBI_0000417op some obo:OBI_0000684c
obo:OBI_0000293op some obo:OBI_0100066c
obo:RO_0000057op some obo:OBI_0400168c
obo:OBI_0000417op some obo:OBI_0000456c

mass analyzerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000345
Super-classes obo:OBI_0000832c
obo:OBI_0000932c
Restrictions obo:RO_0000085op some obo:OBI_0000372c
obo:RO_0000085op some obo:OBI_0000453c

ion sourcec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000361
Super-classes obo:OBI_0000968c
Restrictions obo:RO_0000085op some obo:OBI_0000385c

ion detectorc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000364
Super-classes obo:OBI_0000832c
Restrictions obo:RO_0000085op some obo:OBI_0000453c

metabolite profiling assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000366
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000293op some obo:OBI_0100051c

light emission functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000367
Super-classes obo:OBI_0000374c

magnify functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000369
Super-classes obo:BFO_0000034c

contain functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000370
Super-classes obo:BFO_0000034c

heat functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000371
Super-classes obo:BFO_0000034c

material separation functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000372
Super-classes obo:BFO_0000034c
Sub-classes obo:OBI_0000403c
obo:OBI_0000378c

excitation functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000374
Super-classes obo:BFO_0000034c
Sub-classes obo:OBI_0000367c

synthesizing functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000376
Super-classes obo:BFO_0000034c

perturb functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000377
Super-classes obo:BFO_0000034c

filter functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000378
Super-classes obo:OBI_0000372c

mechanical functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000379
Super-classes obo:BFO_0000034c

electricity supply functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000384
Super-classes obo:OBI_0000391c

ionization functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000385
Super-classes obo:BFO_0000034c

cool functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000387
Super-classes obo:BFO_0000034c

energy supply functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000391
Super-classes obo:BFO_0000034c
Sub-classes obo:OBI_0000384c

image acquisition functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000397
Super-classes obo:OBI_0000453c
Restrictions obo:RO_0000052op some obo:OBI_0000398c
obo:BFO_0000054op only obo:OBI_0001007c

image creation devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000398
Super-classes obo:OBI_0000832c
Sub-classes obo:OBI_0400169c

solid support functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000399
Super-classes obo:BFO_0000034c

environment control functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000401
Super-classes obo:BFO_0000034c

sort functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000403
Super-classes obo:OBI_0000372c

PCR productc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000406
Super-classes obo:CHEBI_4705c
obo:OBI_0000809c

nucleic acid template rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000409
Super-classes obo:OBI_0000025c
Restrictions obo:BFO_0000054op only obo:OBI_0000415c
obo:RO_0000052op some obo:CHEBI_33696c

cloning vector rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000411
Super-classes obo:OBI_0000319c
(n6d93943533d34a84b8c3678390dd5edfb8168c and n6d93943533d34a84b8c3678390dd5edfb8169c)

polymerase chain reactionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000415
Super-classes obo:OBI_0600058c
Restrictions obo:OBI_0000293op some obo:CHEBI_16991c
obo:OBI_0000299op some obo:OBI_0000406c
obo:BFO_0000055op some (obo:OBI_0000376c and n6d93943533d34a84b8c3678390dd5edfb8174c)
Sub-classes obo:OBI_0001914c

cloning insert rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000416
Super-classes obo:BFO_0000023c

reverse transcriptasec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000419
Super-classes obo:OBI_0000427c

extractc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000423
Super-classes obo:OBI_0000047c
Restrictions obo:OBI_0000312op some obo:OBI_0302884c
Sub-classes obo:OBI_0001010c

transcription profiling assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000424
Super-classes obo:OBI_0000070c
Sub-classes obo:OBI_0001674c
obo:OBI_0001463c
obo:OBI_0001673c
obo:OBI_0001361c
obo:OBI_0001271c

enzymec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000427
Super-classes obo:BFO_0000040c
Sub-classes obo:PR_000023089c
obo:GO_0042575c
obo:OBI_0000419c

polyacrylamide gelc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000432
Super-classes obo:OBI_0000047c
Restrictions obo:BFO_0000051op some obo:CHEBI_28619c
obo:OBI_0000312op some obo:OBI_0302890c

adding material objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000434
Super-classes obo:OBI_0000686c

genotyping assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000435
Super-classes obo:OBI_0000443c
(n6d93943533d34a84b8c3678390dd5edfb8243c and n6d93943533d34a84b8c3678390dd5edfb8248c)
Restrictions obo:OBI_0000417op some obo:OBI_0000113c
obo:OBI_0000299op some obo:OBI_0001305c
obo:OBI_0000293op some (obo:OBI_0100051c and n6d93943533d34a84b8c3678390dd5edfb8257c)
Sub-classes obo:OBI_0001247c

analyte measurement objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000437
Super-classes obo:OBI_0000441c

agarose gelc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000439
Super-classes obo:OBI_0000047c
Restrictions obo:OBI_0000312op some obo:OBI_0302890c

assay objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000441
Super-classes obo:IAO_0000005c
Sub-classes obo:OBI_0000437c

analyte assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000443
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some obo:IAO_0000109c
obo:OBI_0000417op some obo:OBI_0000437c
Sub-classes obo:OBI_0000892c
obo:OBI_0001985c
obo:OBI_0002171c
obo:OBI_0000435c
obo:OBI_0002175c
obo:OBI_0000860c
obo:OBI_0000874c
obo:OBI_0001630c
obo:OBI_0001700c

target of material addition rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000444
Super-classes obo:BFO_0000023c
Restrictions obo:BFO_0000054op only obo:OBI_0000274c
obo:RO_0000052op some obo:BFO_0000040c

intra cellular electrophysiology recording assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000447
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some obo:IAO_0000414c
obo:OBI_0000299op some ()
Sub-classes obo:OBI_0002177c

measure functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000453
Super-classes obo:BFO_0000034c
Restrictions obo:BFO_0000054op only ()
obo:RO_0000079op some obo:OBI_0000047c
Sub-classes obo:OBI_0000397c

extracellular electrophysiology recording assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000454
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some ()
obo:OBI_0000299op some obo:IAO_0000414c
Sub-classes obo:OBI_0002186c
obo:OBI_0002189c
obo:OBI_0002187c

material transformation objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000456
Super-classes obo:IAO_0000005c
Sub-classes obo:OBI_0000639c
obo:OBI_0000686c
obo:OBI_0001153c

mass spectrometry assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000470
Super-classes (n6d93943533d34a84b8c3678390dd5edfb8277c and n6d93943533d34a84b8c3678390dd5edfb8282c)
obo:OBI_0000070c
Sub-classes obo:OBI_0002035c

study design executionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000471
Super-classes obo:OBI_0000011c
Sub-classes obo:OBI_0002621c

affinity columnc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000533
Super-classes obo:OBI_0000038c

gel filtration columnc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000535
Super-classes obo:OBI_0000618c

reverse transcribed polymerase chain reactionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000552
Super-classes obo:OBI_0600058c
Restrictions obo:BFO_0000051op some (obo:OBI_0000415c and n6d93943533d34a84b8c3678390dd5edfb8292c)
obo:OBI_0000293op some obo:CHEBI_33697c
obo:OBI_0000299op some obo:OBI_0000406c
Sub-classes obo:OBI_0002090c

scattered molecular aggregatec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000576
Super-classes obo:BFO_0000040c
Restrictions obo:OBI_0000643op some obo:CHEBI_23367c
obo:OBI_0000643op only obo:CHEBI_23367c
Sub-classes obo:OBI_0302876c

chromatography consumablec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000601
Super-classes obo:OBI_0000048c

size exclusion columnc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000618
Super-classes obo:OBI_0000038c
Sub-classes obo:OBI_0000535c

NMR spectroscopy assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000623
Super-classes obo:OBI_0000070c

DNA sequencing assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000626
Super-classes obo:OBI_0600047c
Sub-classes obo:OBI_0001861c
obo:OBI_0001919c

hematology assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000630
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some (obo:IAO_0000030c and n6d93943533d34a84b8c3678390dd5edfb8329c)

DNA methylation profiling assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000634
Super-classes (n6d93943533d34a84b8c3678390dd5edfb8333c and n6d93943533d34a84b8c3678390dd5edfb8338c)
obo:OBI_0002020c
Restrictions obo:OBI_0000299op some (obo:OBI_0100051c and n6d93943533d34a84b8c3678390dd5edfb8347c)
obo:OBI_0000293op some (obo:OBI_0100051c and n6d93943533d34a84b8c3678390dd5edfb8347c)
obo:OBI_0000417op some obo:OBI_0001234c
Sub-classes obo:OBI_0001266c
obo:OBI_0001685c

material separation objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000639
Super-classes obo:OBI_0000456c
Sub-classes obo:OBI_0000681c
obo:OBI_0000678c

differential expression analysis data transformationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000650
Super-classes obo:OBI_0200000c

urine specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000651
Super-classes obo:OBI_0001479c
Restrictions obo:OBI_0000312op some obo:OBI_0600005c
obo:RO_0000087op some obo:OBI_0000112c
obo:RO_0001000op some obo:UBERON_0001088c

material combinationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000652
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000293op some obo:BFO_0000040c
Sub-classes obo:OBI_0000274c
obo:OBI_0000685c

device settingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000654
Super-classes obo:BFO_0000019c
Restrictions obo:RO_0000052op some obo:OBI_0000047c

specimen collection processc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000659
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000299op some obo:OBI_0100051c
obo:OBI_0000293op some obo:BFO_0000040c
Sub-classes obo:OBI_0000341c
obo:OBI_0000744c
obo:OBI_0600005c

BrdU incorporation assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000664
Super-classes (n6d93943533d34a84b8c3678390dd5edfb8373c and n6d93943533d34a84b8c3678390dd5edfb8378c)
obo:OBI_0000891c

tritiated thymidine incorporation assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000669
Super-classes obo:OBI_0000891c
(n6d93943533d34a84b8c3678390dd5edfb8382c and n6d93943533d34a84b8c3678390dd5edfb8387c)
Restrictions obo:BFO_0000051op some obo:OBI_0000201c

sample from organismc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000671
Super-classes obo:OBI_0001479c
obo:OBI_0000747c
Restrictions obo:RO_0001000op some obo:UBERON_0000465c

portioning objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000678
Super-classes obo:OBI_0000639c

separation into different composition objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000681
Super-classes obo:OBI_0000639c
Sub-classes obo:OBI_0000796c

specimen collection objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000684
Super-classes obo:IAO_0000005c

creating a mixture of molecules in solutionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000685
Super-classes obo:OBI_0000652c
Restrictions obo:OBI_0000417op some obo:OBI_0000686c
obo:OBI_0000299op some obo:OBI_0302729c

material combination objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000686
Super-classes obo:OBI_0000456c
Sub-classes obo:OBI_0000434c

immunoprecipitationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000690
Super-classes obo:OBI_0600014c
Restrictions obo:OBI_0000417op some obo:OBI_0000639c
obo:OBI_0000293op some obo:GO_0042571c
Sub-classes obo:OBI_00001975c

survival assessment assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000699
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some ()
obo:OBI_0000299op some obo:OBI_0000789c
obo:OBI_0000293op some obo:OBI_0100026c

library preparationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000711
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000417op some obo:OBI_0000456c
obo:OBI_0000299op some (obo:OBI_0000164c or obo:OBI_0000722c or obo:OBI_0000736c or obo:OBI_1000029c or obo:CHEBI_16991c or obo:CHEBI_4705c)
obo:OBI_0000293op some (obo:OBI_0000164c or obo:OBI_0000722c or obo:OBI_0000736c or obo:OBI_1000029c or obo:CHEBI_16991c or obo:CHEBI_4705c)
Sub-classes obo:OBI_0001852c

ChIP-seq assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000716
Super-classes obo:OBI_0001954c
Sub-classes obo:OBI_0001925c

paired-end libraryc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000722
Super-classes obo:OBI_0000047c

recombinant vectorc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000731
Super-classes obo:OBI_0000047c
Sub-classes obo:OBI_0000164c
obo:OBI_1000029c

single fragment libraryc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000736
Super-classes obo:OBI_0000047c

cloning vectorc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000737
Super-classes obo:OBI_0000047c
obo:OBI_1110108c
Restrictions obo:OBI_0000312op some obo:OBI_0000094c

material sample rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000740
Super-classes obo:OBI_0000112c

material sampling processc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000744
Super-classes obo:OBI_0000659c

material samplec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000747
Super-classes obo:OBI_0100051c
Sub-classes obo:OBI_0000671c

study design independent variablec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000750
Super-classes obo:IAO_0000033c
Restrictions obo:BFO_0000050op some obo:OBI_0500000c

survival ratec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000789
Super-classes obo:IAO_0000109c

purification objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000796
Super-classes obo:OBI_0000681c

cross linkingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000800
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000417op some obo:OBI_0000456c
obo:OBI_0000299op some obo:CHEBI_23367c

material maintenance objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000806
Super-classes obo:IAO_0000005c

presentation of stimulusc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000807
Super-classes obo:OBI_0000011c
Restrictions obo:RO_0000057op some (obo:OBI_0100026c and n6d93943533d34a84b8c3678390dd5edfb8454c)

amplified DNAc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000809
Super-classes obo:CHEBI_16991c
obo:OBI_0000047c
Sub-classes obo:OBI_0000406c

primary structure of DNA macromoleculec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000811
Super-classes obo:SO_0000001c

micro electrodec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000816
Super-classes obo:OBI_0000832c
Restrictions obo:OBI_0000304op some obo:OBI_0000245c
obo:RO_0000085op some obo:OBI_0000453c

measurement devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000832
Super-classes obo:OBI_0000968c
Sub-classes obo:OBI_0001136c
obo:OBI_0001080c
obo:OBI_0400082c
obo:OBI_0000345c
obo:OBI_0400115c
obo:OBI_0400137c
obo:OBI_0001108c
obo:OBI_0400103c
obo:OBI_0000048c
obo:OBI_0001137c
obo:OBI_0000398c
obo:OBI_0000930c
obo:OBI_0000816c
obo:OBI_0000049c
obo:OBI_0000364c
obo:OBI_0001129c

high molecular weight DNA extractc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000834
Super-classes obo:OBI_0001051c

material maintenancec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000838
Super-classes obo:OBI_0000011c
Sub-classes obo:OBI_0600024c

primary structure of RNA moleculec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000845
Super-classes obo:SO_0000001c

complementary nucleotide probe rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000857
Super-classes obo:BFO_0000023c
Restrictions obo:RO_0000052op some obo:CHEBI_33696c

northern blot assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000860
Super-classes obo:OBI_0000443c
(n6d93943533d34a84b8c3678390dd5edfb8474c and n6d93943533d34a84b8c3678390dd5edfb8479c)

pre-mortem specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000873
Super-classes obo:OBI_0001506c

detection of specific nucleic acid polymers with complementary probesc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000874
Super-classes obo:OBI_0000443c

RNA extractc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000880
Super-classes obo:OBI_0001010c
Restrictions obo:OBI_0000312op some obo:OBI_0666666c
obo:OBI_0000643op some obo:CHEBI_33697c

cell-cell killing assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000882
Super-classes obo:OBI_0001977c
Sub-classes obo:OBI_0000903c
obo:OBI_0000883c

in vivo cell killing assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000883
Super-classes obo:OBI_0000882c

cell proliferation assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000891
Super-classes obo:OBI_0001977c
Sub-classes obo:OBI_0000669c
obo:OBI_0000664c

Southern blot assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000892
Super-classes obo:OBI_0000443c
(n6d93943533d34a84b8c3678390dd5edfb8579c and n6d93943533d34a84b8c3678390dd5edfb8584c and n6d93943533d34a84b8c3678390dd5edfb8566c and n6d93943533d34a84b8c3678390dd5edfb8571c)
(n6d93943533d34a84b8c3678390dd5edfb8579c and n6d93943533d34a84b8c3678390dd5edfb8584c and n6d93943533d34a84b8c3678390dd5edfb8566c and n6d93943533d34a84b8c3678390dd5edfb8571c)
Restrictions obo:BFO_0000051op some obo:OBI_0302903c
obo:OBI_0000299op some ()
obo:BFO_0000051op some obo:OBI_0000874c

real time polymerase chain reaction assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000893
Super-classes obo:OBI_0000070c
Restrictions obo:BFO_0000051op some obo:OBI_0000415c

post mortem specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000902
Super-classes obo:OBI_0001506c

in vitro cell killing assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000903
Super-classes obo:OBI_0000882c
Sub-classes obo:OBI_9999994c

X-ray crystallography assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000912
Super-classes obo:OBI_0600045c
(n6d93943533d34a84b8c3678390dd5edfb8618c and n6d93943533d34a84b8c3678390dd5edfb8623c)

promoter activity detection by reporter gene assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000913
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some ()
obo:OBI_0000293op some obo:CL_0000000c

flow cytometry assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000916
Super-classes obo:OBI_0001977c

labeled RNA extractc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000921
Super-classes obo:OBI_0001143c
(n6d93943533d34a84b8c3678390dd5edfb8644c and n6d93943533d34a84b8c3678390dd5edfb8649c)
Restrictions obo:OBI_0000643op some obo:CHEBI_33697c

surface plasmon resonance binding assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000923
Super-classes obo:OBI_0001146c
(n6d93943533d34a84b8c3678390dd5edfb8654c and n6d93943533d34a84b8c3678390dd5edfb8659c)

labeled specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000924
Super-classes obo:OBI_0000953c
obo:OBI_0001936c
Sub-classes obo:OBI_0001143c

infectious agentc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000925
Super-classes obo:OBI_0100026c

calorimeterc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000930
Super-classes obo:OBI_0000832c
Restrictions obo:RO_0000085op some obo:OBI_0000453c

study interventionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000931
Super-classes (n6d93943533d34a84b8c3678390dd5edfb8671c and n6d93943533d34a84b8c3678390dd5edfb8672c)
obo:OBI_0000011c
Restrictions obo:BFO_0000050op some (obo:OBI_0000471c and n6d93943533d34a84b8c3678390dd5edfb8677c)

material separation devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000932
Super-classes obo:OBI_0000968c
Sub-classes obo:OBI_0400153c
obo:OBI_0000048c
obo:OBI_0400168c
obo:OBI_0000038c
obo:OBI_0001053c
obo:OBI_0400079c
obo:OBI_0000151c
obo:OBI_0400078c
obo:OBI_0000345c

processed specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000953
Super-classes obo:OBI_0000047c
obo:OBI_0100051c
Sub-classes obo:OBI_0000924c
obo:OBI_0001010c
obo:OBI_0302716c

in live cell assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000964
Super-classes obo:OBI_0000070c

in live organism assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000966
Super-classes obo:OBI_0000070c
Restrictions obo:RO_0000057op some (obo:BFO_0000040c and n6d93943533d34a84b8c3678390dd5edfb8687c)

containerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000967
Super-classes obo:OBI_0000968c
Sub-classes obo:OBI_0002089c
obo:OBI_0000192c
obo:OBI_0400043c

devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000968
Super-classes obo:OBI_0000047c
Restrictions obo:OBI_0000312op some obo:OBI_0000094c
obo:RO_0000085op some obo:BFO_0000034c
Sub-classes obo:OBI_0001034c
obo:OBI_0400142c
obo:OBI_0001865c
obo:OBI_0000967c
obo:OBI_0001138c
obo:OBI_0001032c
obo:OBI_0000361c
obo:OBI_0000832c
obo:OBI_0001033c
obo:OBI_0000932c

sequence datac # Classes

URI http://purl.obolibrary.org/obo/OBI_0000973
Super-classes (obo:IAO_0000109c and n6d93943533d34a84b8c3678390dd5edfb8702c)
Sub-classes obo:OBI_0001573c

cell-cell binding detection by flow cytometry assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000975
Super-classes obo:OBI_0001977c

in container assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000978
Super-classes obo:OBI_0000070c

growth condition intervention designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000985
Super-classes obo:OBI_0000115c
Restrictions obo:BFO_0000051op some (obo:OBI_0000750c and n6d93943533d34a84b8c3678390dd5edfb8719c and obo:OBI_0000750c and n6d93943533d34a84b8c3678390dd5edfb8714c)
obo:BFO_0000051op some (obo:OBI_0000750c and n6d93943533d34a84b8c3678390dd5edfb8719c and obo:OBI_0000750c and n6d93943533d34a84b8c3678390dd5edfb8714c)

PCR instrumentc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000989
Super-classes obo:OBI_0400116c
Restrictions obo:RO_0000085op some ()

electron microscopec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000990
Super-classes obo:OBI_0400169c

growth environmentc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000997
Super-classes obo:BFO_0000040c

image creationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001007
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000293op some obo:BFO_0000040c
obo:OBI_0000299op some obo:IAO_0000101c

nucleic acid extractc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001010
Super-classes (n6d93943533d34a84b8c3678390dd5edfb8727c and n6d93943533d34a84b8c3678390dd5edfb8728c)
obo:OBI_0000423c
obo:OBI_0000953c
Restrictions obo:OBI_0000643op some obo:CHEBI_33696c
Sub-classes obo:OBI_0000880c
obo:OBI_0001051c

binding constant determination assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001025
Super-classes obo:OBI_0001146c
Restrictions obo:OBI_0000299op some obo:OBI_0001144c

light emission devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001032
Super-classes obo:OBI_0000968c
Sub-classes obo:OBI_0400065c

perturbation devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001033
Super-classes obo:OBI_0000968c
Sub-classes obo:OBI_0400114c

environmental control devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001034
Super-classes obo:OBI_0000968c
Sub-classes obo:OBI_0002089c

DNA extractc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001051
Super-classes obo:OBI_0001010c
Restrictions obo:OBI_0000643op some obo:CHEBI_16991c
obo:OBI_0000312op some obo:OBI_0000257c
Sub-classes obo:OBI_0000834c

electrophoresis systemc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001053
Super-classes obo:OBI_0000932c
Restrictions obo:RO_0000085op some obo:OBI_0000372c
Sub-classes obo:OBI_0001121c

high performance liquid chromatography instrumentc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001057
Super-classes obo:OBI_0001139c

confocal microscopec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001079
Super-classes obo:OBI_0400169c

patch clamp devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001080
Super-classes obo:OBI_0000832c
Restrictions obo:RO_0000085op some obo:OBI_0000453c

nucleic acid sequencerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001108
Super-classes obo:OBI_0000832c
Restrictions obo:RO_0000085op some obo:OBI_0000453c

gel electrophoresis systemc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001121
Super-classes obo:OBI_0001053c

voltage clamp devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001129
Super-classes obo:OBI_0000832c
Restrictions obo:RO_0000085op some obo:OBI_0000453c

surface plasmon resonance instrumentc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001136
Super-classes obo:OBI_0000832c
Restrictions obo:RO_0000085op some obo:OBI_0000453c

protein sequencerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001137
Super-classes obo:OBI_0000832c
Restrictions obo:RO_0000085op some obo:OBI_0000453c

X-ray sourcec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001138
Super-classes obo:OBI_0000968c
Restrictions obo:RO_0000085op some obo:OBI_0000374c

liquid chromatography instrumentc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001139
Super-classes obo:OBI_0000048c
Sub-classes obo:OBI_0001057c

labeled nucleic acid extractc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001143
Super-classes obo:OBI_0000924c
(n6d93943533d34a84b8c3678390dd5edfb8750c and n6d93943533d34a84b8c3678390dd5edfb8755c)
Restrictions obo:OBI_0000643op some obo:CHEBI_33696c
Sub-classes obo:OBI_0000921c

binding constantc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001144
Super-classes obo:OBI_0001181c
Sub-classes obo:OBI_0001583c
obo:OBI_0001536c
obo:OBI_0001571c
obo:OBI_0001548c
obo:OBI_0001581c
obo:OBI_0001603c
obo:OBI_0001605c

3D structure determination of bound complex assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001145
Super-classes obo:OBI_0600045c

binding assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001146
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some ()
obo:OBI_0000299op some obo:OBI_0001181c
Sub-classes obo:OBI_0001591c
obo:OBI_0001025c
obo:OBI_0001681c
obo:OBI_0000923c
obo:OBI_0001979c
obo:OBI_0001671c
obo:OBI_0001634c
obo:OBI_0001669c
obo:OBI_0001476c
obo:OBI_0001668c
obo:OBI_0001679c
obo:OBI_0001593c

cell culture expansionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001147
Super-classes obo:OBI_0000094c
(n6d93943533d34a84b8c3678390dd5edfb8776c and n6d93943533d34a84b8c3678390dd5edfb8777c)
Restrictions obo:OBI_0000417op some obo:OBI_0000456c

gene knock outc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001148
Super-classes obo:OBI_0600043c

gene knock inc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001149
Super-classes obo:OBI_0600043c

genetically modified materialc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001151
Super-classes obo:OBI_0000047c
Sub-classes obo:OBI_0302859c

transfectionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001152
Super-classes obo:OBI_0600043c
Restrictions obo:BFO_0000051op some obo:OBI_0600033c
obo:OBI_0000293op some (n6d93943533d34a84b8c3678390dd5edfb8791c and n6d93943533d34a84b8c3678390dd5edfb8794c)

genetic transformation objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001153
Super-classes obo:OBI_0000456c

induced mutationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001154
Super-classes obo:OBI_0600043c
Sub-classes obo:OBI_0002619c
obo:OBI_0002620c

3D structural organization datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001155
Super-classes obo:IAO_0000109c

half life datum (t 1/2)c # Classes

URI http://purl.obolibrary.org/obo/OBI_0001171
Super-classes obo:IAO_0000416c
Restrictions obo:IAO_0000039op some obo:UO_0000003c
Sub-classes obo:OBI_0001583c

dose response curvec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001172
Super-classes obo:IAO_0000573c

RNA sequencing assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001177
Super-classes obo:OBI_0600047c

half maximal effective concentration (EC50)c # Classes

URI http://purl.obolibrary.org/obo/OBI_0001180
Super-classes obo:IAO_0000032c
Restrictions obo:IAO_0000136op some obo:OBI_0001172c
obo:IAO_0000039op some obo:UO_0000051c
Sub-classes obo:OBI_0001581c

binding datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001181
Super-classes obo:IAO_0000027c
Sub-classes obo:OBI_0001144c

half maximal inhibitory concentration (IC50)c # Classes

URI http://purl.obolibrary.org/obo/OBI_0001191
Super-classes obo:IAO_0000032c
Restrictions obo:IAO_0000039op some obo:UO_0000051c
obo:IAO_0000136op some obo:OBI_0001172c
Sub-classes obo:OBI_0001571c

in vivo designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001199
Super-classes obo:OBI_0500000c

genotyping by high throughput sequencing designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001200
Super-classes obo:OBI_0001444c

ex vivo designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001211
Super-classes obo:OBI_0500000c

genetic population background informationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001225
Super-classes obo:OBI_0001404c
Restrictions obo:BFO_0000050op some obo:OBI_0001305c

epigenetic modification identification objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001234
Super-classes obo:OBI_0000131c

transcription profiling by high throughput sequencing designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001239
Super-classes obo:OBI_0500000c
Restrictions obo:BFO_0000051op some obo:OBI_0001331c

genotyping by high throughput sequencing assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001247
Super-classes obo:OBI_0000435c
(n6d93943533d34a84b8c3678390dd5edfb8844c and n6d93943533d34a84b8c3678390dd5edfb8849c)

ChIP-chip assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001248
Super-classes obo:OBI_0001954c

ChIP-seq designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001258
Super-classes obo:OBI_0001425c
Restrictions obo:BFO_0000051op some obo:OBI_0001398c
obo:BFO_0000051op some obo:OBI_0001234c

DNA methylation profiling by high throughput sequencing assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001266
Super-classes obo:OBI_0000634c
(n6d93943533d34a84b8c3678390dd5edfb8869c and n6d93943533d34a84b8c3678390dd5edfb8874c)
Sub-classes obo:OBI_0001861c

RNA-seq assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001271
Super-classes (n6d93943533d34a84b8c3678390dd5edfb8887c and n6d93943533d34a84b8c3678390dd5edfb8892c and n6d93943533d34a84b8c3678390dd5edfb8878c and n6d93943533d34a84b8c3678390dd5edfb8883c)
(n6d93943533d34a84b8c3678390dd5edfb8887c and n6d93943533d34a84b8c3678390dd5edfb8892c and n6d93943533d34a84b8c3678390dd5edfb8878c and n6d93943533d34a84b8c3678390dd5edfb8883c)
obo:OBI_0600047c
obo:OBI_0000424c
Restrictions obo:OBI_0000299op some (obo:OBI_0100051c and n6d93943533d34a84b8c3678390dd5edfb8897c)
obo:OBI_0000417op some obo:OBI_0001331c
obo:OBI_0000299op some obo:OBI_0000973c
obo:OBI_0000293op some (obo:OBI_0100051c and n6d93943533d34a84b8c3678390dd5edfb8897c)

DNA methylation profiling by array designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001278
Super-classes obo:OBI_0500000c
Restrictions obo:BFO_0000051op some obo:OBI_0001234c

in vitro designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001285
Super-classes obo:OBI_0500000c

transcription profiling by array designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001290
Super-classes obo:OBI_0500000c
Restrictions obo:BFO_0000051op some obo:OBI_0001331c

genotype informationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001305
Super-classes obo:OBI_0001404c
(n6d93943533d34a84b8c3678390dd5edfb8907c and n6d93943533d34a84b8c3678390dd5edfb8908c)

transcription profiling by RT-PCR designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001313
Super-classes obo:OBI_0500000c
Restrictions obo:BFO_0000051op some obo:OBI_0001331c

proteomic profiling by array assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001318
Super-classes obo:OBI_0001985c
(n6d93943533d34a84b8c3678390dd5edfb8913c and n6d93943533d34a84b8c3678390dd5edfb8918c and n6d93943533d34a84b8c3678390dd5edfb8922c and n6d93943533d34a84b8c3678390dd5edfb8927c)
(n6d93943533d34a84b8c3678390dd5edfb8913c and n6d93943533d34a84b8c3678390dd5edfb8918c and n6d93943533d34a84b8c3678390dd5edfb8922c and n6d93943533d34a84b8c3678390dd5edfb8927c)
Restrictions obo:OBI_0000293op some (obo:OBI_0100051c and n6d93943533d34a84b8c3678390dd5edfb8932c)
obo:OBI_0000417op some obo:OBI_0000131c

transcription profiling identification objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001331
Super-classes obo:OBI_0000131c

post-transcriptional modification designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001358
Super-classes obo:OBI_0000115c
Restrictions obo:BFO_0000051op some (obo:OBI_0000750c and n6d93943533d34a84b8c3678390dd5edfb8939c)
obo:BFO_0000051op some obo:OBI_0000015c

transcription profiling by RT-PCR assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001361
Super-classes (n6d93943533d34a84b8c3678390dd5edfb8943c and n6d93943533d34a84b8c3678390dd5edfb8948c)
obo:OBI_0000424c
Restrictions obo:BFO_0000051op some obo:OBI_0000552c

genetic alteration informationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001364
Super-classes obo:OBI_0001404c

cellular process designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001365
Super-classes obo:OBI_0500000c
Restrictions obo:BFO_0000051op some (obo:OBI_0000219c and n6d93943533d34a84b8c3678390dd5edfb8954c)

stimulus or stress designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001396
Super-classes obo:OBI_0000115c
Restrictions obo:BFO_0000051op some (obo:OBI_0000268c and n6d93943533d34a84b8c3678390dd5edfb8959c and obo:OBI_0000750c and n6d93943533d34a84b8c3678390dd5edfb8964c)
obo:BFO_0000051op some (obo:OBI_0000268c and n6d93943533d34a84b8c3678390dd5edfb8959c and obo:OBI_0000750c and n6d93943533d34a84b8c3678390dd5edfb8964c)

protein and DNA interaction identification objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001398
Super-classes obo:OBI_0000113c

ChIP-chip designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001403
Super-classes obo:OBI_0001425c
Restrictions obo:BFO_0000051op some obo:OBI_0001398c
obo:BFO_0000051op some (obo:OBI_0000750c and n6d93943533d34a84b8c3678390dd5edfb8970c)

genetic characteristics informationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001404
Super-classes obo:IAO_0000027c
Restrictions obo:IAO_0000136op some (obo:SO_0000001c and n6d93943533d34a84b8c3678390dd5edfb8975c)
Sub-classes obo:OBI_0001364c
obo:OBI_0001305c
obo:OBI_0001225c

protein binding site identification designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001425
Super-classes obo:OBI_0500000c
Sub-classes obo:OBI_0001403c
obo:OBI_0001258c

transcription profiling designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001430
Super-classes obo:OBI_0500000c

proteomic profiling by array designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001441
Super-classes obo:OBI_0500000c
Restrictions obo:BFO_0000051op some obo:OBI_0000131c

genotyping designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001444
Super-classes obo:OBI_0500000c
Restrictions obo:BFO_0000051op some obo:OBI_0000113c
Sub-classes obo:OBI_0001200c

genetic modification designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001460
Super-classes obo:OBI_0000115c
Restrictions obo:BFO_0000051op some (obo:OBI_0000750c and n6d93943533d34a84b8c3678390dd5edfb8989c)
obo:BFO_0000051op some obo:OBI_0000015c

transcription profiling by array assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001463
Super-classes obo:OBI_0000424c
(n6d93943533d34a84b8c3678390dd5edfb8996c and n6d93943533d34a84b8c3678390dd5edfb9001c)

phage display binding assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001476
Super-classes obo:OBI_0001146c

specimen from organismc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001479
Super-classes obo:OBI_0100051c
Sub-classes obo:OBI_0000671c
obo:OBI_0000651c
obo:OBI_0002516c

phage display library panningc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001480
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000293op some obo:OBI_1000029c

fluorescence detection assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001501
Super-classes obo:OBI_0000070c

purificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001505
Super-classes obo:OBI_0600014c

specimen with pre- or post-mortem statusc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001506
Super-classes obo:OBI_0100051c
Sub-classes obo:OBI_0000902c
obo:OBI_0000873c

equilibrium dissociation constant (KD)c # Classes

URI http://purl.obolibrary.org/obo/OBI_0001536
Super-classes obo:OBI_0001144c
Restrictions obo:IAO_0000039op some obo:UO_0000051c

equilibrium association constant (KA)c # Classes

URI http://purl.obolibrary.org/obo/OBI_0001548
Super-classes obo:OBI_0001144c

rate measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001554
Super-classes obo:IAO_0000032c
Sub-classes obo:OBI_0001605c
obo:OBI_0001603c

equilibrium dissociation constant (KD) approximated by IC50c # Classes

URI http://purl.obolibrary.org/obo/OBI_0001571
Super-classes obo:OBI_0001191c
obo:OBI_0001144c

DNA sequence datac # Classes

URI http://purl.obolibrary.org/obo/OBI_0001573
Super-classes obo:OBI_0000973c
Restrictions obo:IAO_0000136op some obo:OBI_0000811c

equilibrium dissociation constant (KD) approximated by EC50c # Classes

URI http://purl.obolibrary.org/obo/OBI_0001581
Super-classes obo:OBI_0001180c
obo:OBI_0001144c

half life of binding datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001583
Super-classes obo:OBI_0001144c
obo:OBI_0001171c

bindingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001588
Super-classes obo:GO_0008150c
Sub-classes obo:OBI_0001702c
obo:GO_0019904c
obo:GO_0043565c
obo:GO_0001047c

direct binding assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001591
Super-classes obo:OBI_0001146c

competitive inhibition of binding assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001593
Super-classes obo:OBI_0001146c
Restrictions obo:OBI_0000293op some (obo:BFO_0000040c and n6d93943533d34a84b8c3678390dd5edfb9052c)

binding off rate measurement datum (koff)c # Classes

URI http://purl.obolibrary.org/obo/OBI_0001603
Super-classes obo:OBI_0001554c
obo:OBI_0001144c

binding on rate measurement datum (kon)c # Classes

URI http://purl.obolibrary.org/obo/OBI_0001605
Super-classes obo:OBI_0001554c
obo:OBI_0001144c

analytical chromatographyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001630
Super-classes obo:OBI_0000443c
Sub-classes obo:OBI_0002116c

electron microscopy imaging assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001631
Super-classes obo:OBI_0002119c

immuno staining assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001632
Super-classes (n6d93943533d34a84b8c3678390dd5edfb9090c and n6d93943533d34a84b8c3678390dd5edfb9095c)
obo:OBI_0600017c
Sub-classes obo:OBI_0001986c

purified materialc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001633
Super-classes obo:OBI_0000047c

calorimetric binding assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001634
Super-classes obo:OBI_0001146c

antibody binding detection by fluorescence quenchingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001635
Super-classes obo:OBI_0001979c
(n6d93943533d34a84b8c3678390dd5edfb9115c and n6d93943533d34a84b8c3678390dd5edfb9120c)

split-ubiquitin assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001668
Super-classes obo:OBI_0001146c
Restrictions obo:OBI_0000299op some ()
obo:OBI_0000417op some obo:OBI_0001398c
obo:OBI_0000293op some obo:OBI_0001151c

far-Western blot assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001669
Super-classes obo:OBI_0001146c
Restrictions obo:OBI_0000299op some ()
obo:OBI_0000293op some obo:GO_0032991c

RNA protection assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001670
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000293op some obo:OBI_0000880c
obo:OBI_0000299op some ()

electrophoretic mobility shift assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001671
Super-classes obo:OBI_0001146c
Restrictions obo:OBI_0000293op some obo:OBI_0000880c
obo:OBI_0000299op some ()

gene knock-down assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001672
Super-classes obo:OBI_0000070c
Restrictions obo:BFO_0000051op some obo:OBI_0002625c
obo:OBI_0000299op some ()
obo:OBI_0000293op some obo:OBI_0100060c

nano-cap analysis of gene expression assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001673
Super-classes obo:OBI_0000424c
Restrictions obo:OBI_0000299op some ()
obo:OBI_0000293op some obo:OBI_0000880c
obo:OBI_0000417op some obo:OBI_0001331c

cap analysis of gene expression assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001674
Super-classes obo:OBI_0600047c
(n6d93943533d34a84b8c3678390dd5edfb9152c and n6d93943533d34a84b8c3678390dd5edfb9157c)
obo:OBI_0000424c
Restrictions obo:OBI_0000299op some obo:OBI_0000973c
obo:OBI_0000417op some obo:OBI_0001331c
obo:BFO_0000051op some obo:OBI_0000552c
obo:OBI_0000293op some obo:OBI_0000880c
obo:OBI_0000299op some ()

yeast 2-hybrid assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001679
Super-classes obo:OBI_0001146c
Restrictions obo:OBI_0000293op some obo:OBI_0001151c
obo:OBI_0000299op some ()
obo:OBI_0000417op some obo:OBI_0001398c

yeast one-hybrid assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001681
Super-classes obo:OBI_0001146c
Restrictions obo:OBI_0000293op some obo:OBI_0001151c
obo:OBI_0000299op some ()
Sub-classes obo:OBI_0001682c

bacterial one-hybrid assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001682
Super-classes obo:OBI_0001681c
Restrictions obo:OBI_0000417op some obo:OBI_0001398c

chromosome organization assay by fluorescence in-situ hybridizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001683
Super-classes (n6d93943533d34a84b8c3678390dd5edfb9175c and n6d93943533d34a84b8c3678390dd5edfb9181c)
obo:OBI_0001686c
Restrictions obo:OBI_0000293op some obo:REO_0000280c
obo:OBI_0000299op some ()

methylation-specific polymerase chain reaction assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001684
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some ()

amplification of intermethylated sites assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001685
Super-classes obo:OBI_0000634c
Restrictions obo:OBI_0000299op some ()
obo:OBI_0000293op some obo:OBI_0000834c

in-situ hybridization assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001686
Super-classes obo:OBI_0000070c
Restrictions obo:BFO_0000051op some obo:OBI_0302903c
obo:OBI_0000417op some obo:OBI_0000015c
obo:OBI_0000299op some ()
obo:OBI_0000293op some obo:OBI_0001143c
Sub-classes obo:OBI_0001683c

cytochalasin-induced inhibition of actin polymerization assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001689
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000417op some obo:OBI_0000015c
obo:OBI_0000293op some obo:CHEBI_23528c
obo:OBI_0000299op some ()

cellular structure feature identification objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001691
Super-classes obo:OBI_0000015c

immunoprecipitation assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001700
Super-classes obo:OBI_0000443c
Sub-classes obo:OBI_0001956c

immunoglobulin binding to epitopec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001702
Super-classes obo:OBI_0001588c
obo:OBI_1110014c
Restrictions obo:BFO_0000055op some (obo:BFO_0000040c and n6d93943533d34a84b8c3678390dd5edfb9232c and obo:OBI_1110045c and n6d93943533d34a84b8c3678390dd5edfb9222c)
obo:RO_0000057op some obo:GO_0042571c
obo:RO_0000057op some (obo:BFO_0000040c and n6d93943533d34a84b8c3678390dd5edfb9232c and obo:OBI_1110045c and n6d93943533d34a84b8c3678390dd5edfb9222c)

paired-end library preparationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001852
Super-classes obo:OBI_0000711c

methylation-sensitive restriction enzyme sequencing assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001861
Super-classes obo:OBI_0000626c
obo:OBI_0001266c
Restrictions obo:BFO_0000051op some obo:OBI_0600050c
obo:BFO_0000051op some obo:OBI_0000626c
obo:OBI_0000299op some ()
obo:OBI_0000299op some obo:OBI_0001573c
obo:BFO_0000051op some obo:OBI_0000711c

assay arrayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001865
Super-classes obo:OBI_0000968c
Restrictions obo:RO_0000085op some obo:OBI_0000399c
Sub-classes obo:OBI_0400147c

reagentc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001879
Super-classes obo:OBI_0000047c
Restrictions obo:OBI_0000312op some obo:OBI_0000094c

cell freezing mediumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001912
Super-classes obo:OBI_0000047c

multiplex ligation-mediated amplificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001914
Super-classes obo:OBI_0000415c
Restrictions obo:BFO_0000051op some obo:OBI_0302892c

chromosome conformation identification objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001917
Super-classes obo:OBI_0000131c

Carbon-copy chromosome conformation capture assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001919
Super-classes (n6d93943533d34a84b8c3678390dd5edfb9253c and n6d93943533d34a84b8c3678390dd5edfb9258c and n6d93943533d34a84b8c3678390dd5edfb9262c and n6d93943533d34a84b8c3678390dd5edfb9267c)
(n6d93943533d34a84b8c3678390dd5edfb9253c and n6d93943533d34a84b8c3678390dd5edfb9258c and n6d93943533d34a84b8c3678390dd5edfb9262c and n6d93943533d34a84b8c3678390dd5edfb9267c)
obo:OBI_0000626c
Restrictions obo:BFO_0000051op some obo:OBI_0600050c
obo:OBI_0000417op some obo:OBI_0001917c
obo:BFO_0000051op some obo:OBI_0000626c
obo:BFO_0000051op some obo:OBI_0001914c
obo:BFO_0000051op some obo:OBI_0000711c
obo:BFO_0000051op some obo:OBI_0000690c
obo:OBI_0000299op some obo:OBI_0001573c

chromatin immunoprecipitation with exonuclease sequencing assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001925
Super-classes obo:OBI_0000716c
(n6d93943533d34a84b8c3678390dd5edfb9282c and n6d93943533d34a84b8c3678390dd5edfb9287c)
Restrictions obo:BFO_0000051op some obo:OBI_0600050c
obo:BFO_0000051op some obo:OBI_0000800c
obo:OBI_0000299op some obo:OBI_0001573c

scalar value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001931
Super-classes obo:OBI_0001933c
Restrictions obo:OBI_0001937dp min 1
obo:IAO_0000039op min 1

value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001933
Super-classes obo:IAO_0000030c
Sub-classes obo:OBI_0001931c
In domain of obo:OBI_0001937dp
obo:OBI_0002135dp
In range of obo:OBI_0001938op

molecular-labeled materialc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001936
Super-classes obo:OBI_0000047c
Sub-classes obo:OBI_0000924c

ChIP assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001954
Super-classes obo:OBI_0000070c
Sub-classes obo:OBI_0000716c
obo:OBI_0001248c
obo:OBI_0002169c

competitive binding reference ligand rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001955
Super-classes obo:OBI_0000064c

assay using chromatin immunoprecipitationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001956
Super-classes obo:OBI_0001700c
Restrictions obo:OBI_0000417op some (obo:OBI_0001234c or obo:OBI_0001398c)
obo:BFO_0000051op some obo:OBI_00001975c

cytometry assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001977
Super-classes obo:OBI_0000070c
Sub-classes obo:OBI_0000882c
obo:OBI_0002187c
obo:OBI_0000916c
obo:OBI_0000891c
obo:OBI_0000975c
obo:OBI_0302736c

fluorescence quenching binding assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001979
Super-classes obo:OBI_0001146c
Restrictions obo:BFO_0000051op some obo:OBI_0001501c
Sub-classes obo:OBI_0001635c

microarray assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001985
Super-classes obo:OBI_0000443c
Sub-classes obo:OBI_0001318c

immunohistochemistryc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001986
Super-classes obo:OBI_0001632c

epigenetic modification assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002020
Super-classes obo:OBI_0000070c
Sub-classes obo:OBI_0000634c

peptide mass fingerprinting assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002035
Super-classes obo:OBI_0000470c

collection of specimensc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002076
Super-classes obo:BFO_0000040c

reporter gene assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002082
Super-classes obo:OBI_0000070c

physical storec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002089
Super-classes obo:OBI_0000967c
obo:OBI_0001034c
Sub-classes obo:OBI_0400116c
obo:OBI_0400111c
obo:OBI_0400110c
obo:OBI_0400140c
obo:OBI_0000048c

rapid amplification of cDNA endsc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002090
Super-classes obo:OBI_0000552c

high performance liquid chromotography assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002116
Super-classes obo:OBI_0001630c

microscopy assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002119
Super-classes obo:OBI_0000185c
Sub-classes obo:OBI_0001631c
obo:CHMO_0000102c
obo:CHMO_0000087c

protein localization assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002165
Super-classes obo:OBI_0000070c
Sub-classes obo:OBI_0002167c

subcellular protein localization assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002167
Super-classes (n6d93943533d34a84b8c3678390dd5edfb9420c and n6d93943533d34a84b8c3678390dd5edfb9425c)
obo:OBI_0002165c

ChIP-qPCR assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002169
Super-classes obo:OBI_0001954c
Restrictions obo:BFO_0000051op some obo:OBI_0000893c

dot blot assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002171
Super-classes obo:OBI_0000443c

ATP bioluminescence assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002175
Super-classes (n6d93943533d34a84b8c3678390dd5edfb9430c and n6d93943533d34a84b8c3678390dd5edfb9435c)
obo:OBI_0000443c

electrophysiology assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002176
Super-classes obo:OBI_0000070c

patch clamp assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002177
Super-classes obo:OBI_0000447c
(n6d93943533d34a84b8c3678390dd5edfb9439c and n6d93943533d34a84b8c3678390dd5edfb9444c)
Sub-classes obo:OBI_0002179c
obo:OBI_0002181c
obo:OBI_0002178c
obo:OBI_0002180c

whole-cell patch clamp assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002178
Super-classes obo:OBI_0002177c

cell-attached patch clamp assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002179
Super-classes obo:OBI_0002177c

inside-out patch clamp assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002180
Super-classes obo:OBI_0002177c

outside-out patch clamp assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002181
Super-classes obo:OBI_0002177c

electroencephalographyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002186
Super-classes obo:OBI_0000454c

single-unit recordingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002187
Super-classes obo:OBI_0001977c
(n6d93943533d34a84b8c3678390dd5edfb9448c and n6d93943533d34a84b8c3678390dd5edfb9453c and n6d93943533d34a84b8c3678390dd5edfb9457c and n6d93943533d34a84b8c3678390dd5edfb9466c)
(n6d93943533d34a84b8c3678390dd5edfb9448c and n6d93943533d34a84b8c3678390dd5edfb9453c and n6d93943533d34a84b8c3678390dd5edfb9457c and n6d93943533d34a84b8c3678390dd5edfb9466c)
obo:OBI_0000454c
Restrictions obo:OBI_0000299op some ()

local field potential recordingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002189
Super-classes (n6d93943533d34a84b8c3678390dd5edfb9489c and n6d93943533d34a84b8c3678390dd5edfb9498c and n6d93943533d34a84b8c3678390dd5edfb9480c and n6d93943533d34a84b8c3678390dd5edfb9485c)
obo:OBI_0000454c
(n6d93943533d34a84b8c3678390dd5edfb9489c and n6d93943533d34a84b8c3678390dd5edfb9498c and n6d93943533d34a84b8c3678390dd5edfb9480c and n6d93943533d34a84b8c3678390dd5edfb9485c)
Restrictions obo:OBI_0000299op some ()

RNA interactome capturec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002436
Super-classes obo:OBI_0000070c
Restrictions obo:BFO_0000051op some obo:OBI_0000470c

nuclear ligation assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002438
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000293op some obo:PR_000023089c
obo:OBI_0000417op some obo:OBI_0001398c
Sub-classes obo:OBI_0002439c

chromosome conformation capture assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002439
Super-classes obo:OBI_0002438c
Restrictions obo:OBI_0000417op some obo:OBI_0001917c
Sub-classes obo:OBI_0002440c

Hi-C assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002440
Super-classes obo:OBI_0002439c

measurand rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002444
Super-classes obo:BFO_0000023c
Restrictions obo:RO_0000081op some obo:BFO_0000040c
Sub-classes obo:OBI_0000275c

suppression subtractive hybridizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002447
Super-classes obo:OBI_0000253c

differential screening hybridizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002448
Super-classes obo:OBI_0000253c

brain specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002516
Super-classes obo:OBI_0001479c

molecular interaction identification designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002590
Super-classes obo:OBI_0500000c
Restrictions obo:BFO_0000051op some obo:OBI_0000131c

site-directed mutagenesisc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002619
Super-classes obo:OBI_0001154c

random mutagenesisc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002620
Super-classes obo:OBI_0001154c

reconstitution assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002621
Super-classes obo:OBI_0000070c
obo:OBI_0000471c
Restrictions obo:BFO_0000055op some ()
obo:OBI_0000299op some ()
Sub-classes obo:OBI_0002622c

in vitro transcription reconstitution assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002622
Super-classes obo:OBI_0002621c
Restrictions obo:OBI_0000299op some ()

gene knockdownc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002625
Super-classes obo:OBI_0600043c

Epstein Barr virus transformed B cellc # Classes

URI http://purl.obolibrary.org/obo/OBI_0100010
Super-classes obo:OBI_0000047c

organismc # Classes

URI http://purl.obolibrary.org/obo/OBI_0100026
Super-classes obo:BFO_0000040c
Sub-classes obo:NCBITaxon_2c
obo:NCBITaxon_10239c
obo:OBI_0000925c
obo:OBI_0302859c
obo:NCBITaxon_2157c
obo:NCBITaxon_2759c

specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0100051
Super-classes obo:BFO_0000040c
Sub-classes obo:OBI_0000747c
obo:OBI_0000953c
obo:OBI_0001479c
obo:OBI_0001506c

cultured cell populationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0100060
Super-classes obo:OBI_0000047c
Restrictions obo:OBI_0000643op some obo:CL_0000010c
obo:OBI_0000643op only obo:CL_0000010c
obo:OBI_0000312op some obo:OBI_0600024c

organ sectionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0100066
Super-classes obo:OBI_0000047c
Restrictions obo:RO_0001000op some obo:UBERON_0000465c
obo:OBI_0000312op some (obo:OBI_0000341c or obo:OBI_0600005c)

data transformationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0200000
Super-classes obo:OBI_0000011c
Restrictions obo:BFO_0000055op some ()
obo:OBI_0000293op only obo:IAO_0000027c
Sub-classes obo:OBI_0200085c
obo:OBI_0000650c

differential expression analysis objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0200031
Super-classes obo:OBI_0200166c

mass spectrometry analysisc # Classes

URI http://purl.obolibrary.org/obo/OBI_0200085
Super-classes obo:OBI_0200000c

data transformation objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0200166
Super-classes obo:IAO_0000005c
Sub-classes obo:OBI_0200197c
obo:OBI_0200031c

spectrum analysis objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0200197
Super-classes obo:OBI_0200166c

pool of specimensc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302716
Super-classes obo:OBI_0000953c

chemical solutionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302729
Super-classes obo:BFO_0000040c

solvent rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0302732
Super-classes obo:BFO_0000023c
Restrictions obo:BFO_0000054op only obo:OBI_0000685c
obo:RO_0000052op some obo:CHEBI_23367c

solute rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0302733
Super-classes obo:BFO_0000023c
Restrictions obo:BFO_0000054op only obo:OBI_0000685c
obo:RO_0000052op some obo:CHEBI_23367c

comet assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302736
Super-classes obo:OBI_0001977c
(n6d93943533d34a84b8c3678390dd5edfb9595c and n6d93943533d34a84b8c3678390dd5edfb9600c and n6d93943533d34a84b8c3678390dd5edfb9608c and n6d93943533d34a84b8c3678390dd5edfb9619c)
(n6d93943533d34a84b8c3678390dd5edfb9595c and n6d93943533d34a84b8c3678390dd5edfb9600c and n6d93943533d34a84b8c3678390dd5edfb9608c and n6d93943533d34a84b8c3678390dd5edfb9619c)
Restrictions obo:OBI_0000293op some obo:OBI_0000439c
obo:BFO_0000051op some obo:CHMO_0000087c
obo:OBI_0000299op some ()

genetically modified organismc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302859
Super-classes obo:OBI_0001151c
obo:OBI_0100026c
Sub-classes obo:OBI_1000048c

dissolved material entityc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302876
Super-classes obo:OBI_0000576c

extractionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302884
Super-classes obo:OBI_0600014c
Restrictions obo:OBI_0000417op some obo:OBI_0000681c
Sub-classes obo:OBI_0666667c

stainingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302887
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000417op some obo:OBI_0000456c

polymerizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302890
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000293op some obo:CHEBI_23367c
obo:OBI_0000417op some obo:OBI_0000456c
obo:OBI_0000299op some obo:CHEBI_33839c

enzymatic ligationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302892
Super-classes obo:OBI_0000094c
Restrictions obo:BFO_0000055op some (obo:BFO_0000034c and n6d93943533d34a84b8c3678390dd5edfb9649c)
obo:OBI_0000417op some obo:OBI_0000456c

nucleic acid hybridizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302903
Super-classes obo:OBI_0000094c
Restrictions obo:BFO_0000055op some (obo:BFO_0000034c and n6d93943533d34a84b8c3678390dd5edfb9655c)

elutionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302905
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000417op some obo:OBI_0000456c
obo:RO_0000057op some obo:OBI_0000038c
obo:OBI_0000299op some obo:OBI_0000318c
obo:OBI_0000293op some (obo:CHEBI_23367c and n6d93943533d34a84b8c3678390dd5edfb9660c)

flow cellc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400043
Super-classes obo:OBI_0000967c
Restrictions obo:RO_0000085op some obo:OBI_0000370c

flow cytometerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400044
Super-classes (n6d93943533d34a84b8c3678390dd5edfb9668c and n6d93943533d34a84b8c3678390dd5edfb9669c and n6d93943533d34a84b8c3678390dd5edfb9670c and n6d93943533d34a84b8c3678390dd5edfb9671c)
obo:OBI_0400137c
Restrictions obo:BFO_0000051op some obo:OBI_0400078c
obo:BFO_0000051op some obo:OBI_0400153c

light sourcec # Classes

URI http://purl.obolibrary.org/obo/OBI_0400065
Super-classes obo:OBI_0001032c
Restrictions obo:RO_0000085op some obo:OBI_0000367c

obscuration barc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400078
Super-classes obo:OBI_0000932c
Restrictions obo:RO_0000085op some obo:OBI_0000378c

optical filterc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400079
Super-classes obo:OBI_0000932c
Restrictions obo:RO_0000085op some obo:OBI_0000378c

photodetectorc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400082
Super-classes obo:OBI_0000832c
Restrictions obo:RO_0000085op some obo:OBI_0000453c

DNA sequencerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400103
Super-classes obo:OBI_0000832c
Restrictions obo:RO_0000085op some obo:OBI_0000453c

hybridization chamberc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400110
Super-classes obo:OBI_0002089c
Restrictions obo:RO_0000085op some obo:OBI_0000401c
obo:RO_0000085op some obo:OBI_0000370c

hybridization stationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400111
Super-classes obo:OBI_0002089c

sonicatorc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400114
Super-classes obo:OBI_0001033c
Restrictions obo:RO_0000085op some obo:OBI_0000377c

spectrophotometerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400115
Super-classes obo:OBI_0000832c
Restrictions obo:RO_0000085op some obo:OBI_0000453c

thermal cyclerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400116
Super-classes obo:OBI_0002089c
Restrictions obo:RO_0000085op some obo:OBI_0000401c
obo:RO_0000085op some obo:OBI_0000370c
Sub-classes obo:OBI_0000989c

cytometerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400137
Super-classes obo:OBI_0000832c
(n6d93943533d34a84b8c3678390dd5edfb9696c and n6d93943533d34a84b8c3678390dd5edfb9697c and n6d93943533d34a84b8c3678390dd5edfb9698c)
Restrictions obo:RO_0000085op some obo:OBI_0000453c
Sub-classes obo:OBI_0400044c

gel tankc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400140
Super-classes obo:OBI_0002089c
Restrictions obo:RO_0000085op some obo:OBI_0000401c
obo:RO_0000085op some obo:OBI_0000370c

power supplyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400142
Super-classes obo:OBI_0000968c
Restrictions obo:RO_0000085op some obo:OBI_0000384c

microarrayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400147
Super-classes obo:OBI_0001865c
Sub-classes obo:OBI_0400149c
obo:OBI_0400148c

DNA microarrayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400148
Super-classes obo:OBI_0400147c

protein microarrayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400149
Super-classes obo:OBI_0400147c

droplet sorterc # Classes

URI http://purl.obolibrary.org/obo/OBI_0400153
Super-classes obo:OBI_0000932c
Restrictions obo:RO_0000085op some obo:OBI_0000403c

microtomec # Classes

URI http://purl.obolibrary.org/obo/OBI_0400168
Super-classes obo:OBI_0000932c
Restrictions obo:RO_0000085op some obo:OBI_0000379c
obo:RO_0000085op some obo:OBI_0000372c

microscopec # Classes

URI http://purl.obolibrary.org/obo/OBI_0400169
Super-classes obo:OBI_0000398c
Restrictions obo:RO_0000085op some obo:OBI_0000397c
obo:RO_0000085op some obo:OBI_0000369c
Sub-classes obo:OBI_0000990c
obo:OBI_0001079c

study designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0500000
Super-classes obo:IAO_0000104c
Restrictions obo:BFO_0000051op some obo:OBI_0000272c
Sub-classes obo:OBI_0500001c
obo:OBI_0500010c
obo:OBI_0001430c
obo:OBI_0001211c
obo:OBI_0001239c
obo:OBI_0001441c
obo:OBI_0001199c
obo:OBI_0001278c
obo:OBI_0001444c
obo:OBI_0001313c
obo:OBI_0000115c
obo:OBI_0001365c
obo:OBI_0001285c
obo:OBI_0002590c
obo:OBI_0001290c
obo:OBI_0001425c

clinical study designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0500001
Super-classes obo:OBI_0500000c

reference designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0500010
Super-classes obo:OBI_0500000c

adding substance to cell culturec # Classes

URI http://purl.obolibrary.org/obo/OBI_0600000
Super-classes obo:OBI_0000274c
Restrictions obo:OBI_0000417op some obo:OBI_0000434c
obo:OBI_0000293op some obo:OBI_0100060c
obo:OBI_0000299op some obo:OBI_0100060c
Sub-classes obo:OBI_1110030c

collecting specimen from organismc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600005
Super-classes obo:OBI_0000659c
Restrictions obo:OBI_0000417op some obo:OBI_0000684c
obo:OBI_0000293op some obo:OBI_0100026c

administering substance in vivoc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600007
Super-classes obo:OBI_0000274c
Restrictions obo:OBI_0000417op some obo:OBI_0000434c
obo:OBI_0000299op max 1
obo:OBI_0000299op some obo:OBI_0100026c
obo:OBI_0000293op some obo:OBI_0100026c

material component separationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600014
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000293op some obo:BFO_0000040c
Sub-classes obo:OBI_0000690c
obo:OBI_0600053c
obo:OBI_0600046c
obo:OBI_0001505c
obo:OBI_0302884c
obo:OBI_0600051c

assay detecting a molecular labelc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600017
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some obo:IAO_0000109c
obo:OBI_0000293op some obo:OBI_0001936c
obo:OBI_0000299op some ()
Sub-classes obo:OBI_0001632c

histological assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600020
Super-classes obo:OBI_0000070c
Restrictions obo:BFO_0000051op some obo:OBI_0000185c
obo:BFO_0000051op some obo:OBI_0000341c
obo:OBI_0000299op some ()

maintaining cell culturec # Classes

URI http://purl.obolibrary.org/obo/OBI_0600024
Super-classes obo:OBI_0000838c
Restrictions obo:OBI_0000293op some obo:OBI_0100060c
obo:OBI_0000299op some obo:OBI_0100060c
obo:OBI_0000293op some (obo:OBI_0000079c or obo:OBI_0001912c)
obo:OBI_0000417op some obo:OBI_0000806c

substance detection assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600025
Super-classes (n6d93943533d34a84b8c3678390dd5edfb9763c and n6d93943533d34a84b8c3678390dd5edfb9768c)
obo:OBI_0000070c
Restrictions obo:OBI_0000299op some obo:IAO_0000109c

artificially induced reverse transcriptionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600028
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000293op some obo:CHEBI_33697c
obo:OBI_0000417op some obo:OBI_0000456c
obo:OBI_0000299op some obo:CHEBI_16991c
obo:OBI_0000293op some obo:OBI_0000419c

cell permeabilizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600033
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000417op some obo:OBI_0000456c
obo:OBI_0000293op some obo:CL_0000000c
obo:OBI_0000299op some obo:CL_0000000c

establishing cell culturec # Classes

URI http://purl.obolibrary.org/obo/OBI_0600036
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000299op some obo:OBI_0100060c
obo:OBI_0000293op some obo:CL_0000000c
obo:OBI_0000293op some obo:OBI_0000079c
obo:OBI_0000417op some obo:OBI_0000456c

addition of molecular labelc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600038
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000293op some obo:OBI_1110109c
obo:OBI_0000299op some obo:OBI_0001936c
obo:OBI_0000293op some obo:REO_0000280c
obo:OBI_0000417op some obo:OBI_0000456c

genetic transformationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600043
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000417op some obo:OBI_0001153c
obo:OBI_0000299op some obo:OBI_0001151c
Sub-classes obo:OBI_0002625c
obo:OBI_0001152c
obo:OBI_0001149c
obo:OBI_0001148c
obo:OBI_0001154c

3D structure determination assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600045
Super-classes obo:OBI_0000070c
Sub-classes obo:OBI_0000912c
obo:OBI_0001145c

preparative chromatographyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600046
Super-classes obo:OBI_0600014c
Restrictions obo:RO_0000057op some obo:OBI_0000038c
obo:OBI_0000417op some obo:OBI_0000681c
obo:OBI_0000299op some obo:OBI_0000318c
obo:RO_0000057op some obo:OBI_0000048c

sequencing assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600047
Super-classes obo:OBI_0000070c
Sub-classes obo:OBI_0000626c
obo:OBI_0001674c
obo:OBI_0001271c
obo:OBI_0001177c

specific enzymatic cleavagec # Classes

URI http://purl.obolibrary.org/obo/OBI_0600050
Super-classes obo:OBI_0000231c

gradient separationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600051
Super-classes obo:OBI_0600014c
Restrictions obo:OBI_0000417op some obo:OBI_0000681c

electrophoresisc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600053
Super-classes obo:OBI_0600014c
Restrictions obo:RO_0000057op some obo:OBI_0400142c
obo:OBI_0000417op some obo:OBI_0000681c
obo:OBI_0000293op some (obo:OBI_0000432c or obo:OBI_0000439c)
obo:RO_0000057op some obo:OBI_0400140c

selection by survivalc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600054
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000417op some obo:OBI_0000456c

DNA cleavage, restriction analysisc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600055
Super-classes obo:OBI_0000231c
Restrictions obo:OBI_0000293op some obo:CHEBI_33697c

enzymatic amplificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600058
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000293op some (obo:BFO_0000034c and n6d93943533d34a84b8c3678390dd5edfb9860c and obo:BFO_0000040c and n6d93943533d34a84b8c3678390dd5edfb9865c)
obo:OBI_0000417op some obo:OBI_0000456c
obo:BFO_0000055op some (obo:BFO_0000034c and n6d93943533d34a84b8c3678390dd5edfb9860c and obo:BFO_0000040c and n6d93943533d34a84b8c3678390dd5edfb9865c)
Sub-classes obo:OBI_0000552c
obo:OBI_0000415c

recombinant vector cloningc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600064
Super-classes obo:OBI_0000094c
Restrictions obo:BFO_0000055op some obo:OBI_0000411c
obo:OBI_0000293op some obo:OBI_0000737c
obo:OBI_0000417op some obo:OBI_0000456c
obo:OBI_0000299op some obo:OBI_0000731c
obo:OBI_0000293op some (obo:BFO_0000040c and n6d93943533d34a84b8c3678390dd5edfb9873c)

RNA extractionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0666666
Super-classes obo:OBI_0666667c
Restrictions obo:OBI_0000299op some obo:CHEBI_33697c

nucleic acid extractionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0666667
Super-classes obo:OBI_0302884c
Restrictions obo:OBI_0000299op some obo:CHEBI_33696c
obo:OBI_0000293op some (obo:OBI_0000671c or obo:OBI_0100026c or obo:OBI_0100060c)
Sub-classes obo:OBI_0666666c
obo:OBI_0000257c

phage display libraryc # Classes

URI http://purl.obolibrary.org/obo/OBI_1000029
Super-classes obo:OBI_0000731c
Restrictions obo:OBI_0000312op some obo:OBI_0600064c
obo:OBI_0000643op some obo:OBI_0000731c

transgenic organismc # Classes

URI http://purl.obolibrary.org/obo/OBI_1000048
Super-classes obo:OBI_0302859c
Restrictions obo:OBI_0000312op some obo:OBI_0600043c

epitopec # Classes

URI http://purl.obolibrary.org/obo/OBI_1110001
Super-classes obo:BFO_0000040c

epitope binding by adaptive immune receptorc # Classes

URI http://purl.obolibrary.org/obo/OBI_1110014
Super-classes obo:GO_0008150c
Sub-classes obo:OBI_0001702c

infection processc # Classes

URI http://purl.obolibrary.org/obo/OBI_1110021
Super-classes obo:OBI_1110122c
Restrictions obo:RO_0000057op some obo:IDO_0000586c
obo:BFO_0000055op some obo:OBI_1110093c

adaptive immune receptorc # Classes

URI http://purl.obolibrary.org/obo/OBI_1110022
Super-classes obo:GO_0032991c
Sub-classes obo:GO_0042101c
obo:GO_0019815c
obo:GO_0042571c

experimental infection of cell culturec # Classes

URI http://purl.obolibrary.org/obo/OBI_1110030
Super-classes obo:OBI_0600000c
Restrictions obo:BFO_0000055op some (obo:OBI_0000319c and n6d93943533d34a84b8c3678390dd5edfb9906c)

antigenc # Classes

URI http://purl.obolibrary.org/obo/OBI_1110034
Super-classes obo:BFO_0000040c

disposition to be bound by an adaptive immune receptorc # Classes

URI http://purl.obolibrary.org/obo/OBI_1110045
Super-classes obo:BFO_0000016c
Restrictions obo:BFO_0000054op only obo:OBI_1110014c

disposition to infect an organismc # Classes

URI http://purl.obolibrary.org/obo/OBI_1110093
Super-classes obo:BFO_0000016c
Restrictions obo:BFO_0000054op only obo:OBI_1110021c

material to be addedc # Classes

URI http://purl.obolibrary.org/obo/OBI_1110108
Super-classes obo:BFO_0000040c
Sub-classes obo:OBI_0000737c

target of material additionc # Classes

URI http://purl.obolibrary.org/obo/OBI_1110109
Super-classes obo:BFO_0000040c

assay antigen rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_1110120
Super-classes obo:BFO_0000023c
Restrictions obo:BFO_0000054op only obo:OBI_0000070c

pathologic processc # Classes

URI http://purl.obolibrary.org/obo/OBI_1110122
Super-classes obo:GO_0008150c
Sub-classes obo:OBI_1110021c

chromium release assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_9999994
Super-classes obo:OBI_0000903c
(n6d93943533d34a84b8c3678390dd5edfb9916c and n6d93943533d34a84b8c3678390dd5edfb9921c)
Restrictions obo:BFO_0000051op some obo:OBI_0000201c

fluorescencec # Classes

URI http://purl.obolibrary.org/obo/PATO_0000018
Super-classes obo:PATO_0001296c

massc # Classes

URI http://purl.obolibrary.org/obo/PATO_0000125
Super-classes obo:BFO_0000019c

viabilityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0000169
Super-classes obo:PATO_0001995c
Sub-classes obo:PATO_0001422c
obo:PATO_0001421c

physical qualityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001018
Super-classes obo:PATO_0001241c
Sub-classes obo:PATO_0001739c

physical object qualityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001241
Super-classes obo:BFO_0000019c
Sub-classes obo:PATO_0001018c
obo:PATO_0001995c

electromagnetic (EM) radiation qualityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001291
Super-classes obo:PATO_0001739c
Sub-classes obo:PATO_0001300c

luminous fluxc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001296
Super-classes obo:PATO_0001300c
Sub-classes obo:PATO_0000018c

optical qualityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001300
Super-classes obo:PATO_0001291c
Sub-classes obo:PATO_0001296c

alivec # Classes

URI http://purl.obolibrary.org/obo/PATO_0001421
Super-classes obo:PATO_0000169c

deadc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001422
Super-classes obo:PATO_0000169c

radiation qualityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001739
Super-classes obo:PATO_0001018c
Sub-classes obo:PATO_0001291c
obo:PATO_0001740c

activity (of a radionuclide)c # Classes

URI http://purl.obolibrary.org/obo/PATO_0001740
Super-classes obo:PATO_0001739c
Sub-classes obo:PATO_0001741c

radioactivec # Classes

URI http://purl.obolibrary.org/obo/PATO_0001741
Super-classes obo:PATO_0001740c

organismal qualityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001995
Super-classes obo:PATO_0001241c
Sub-classes obo:PATO_0000169c

proteinc # Classes

URI http://purl.obolibrary.org/obo/PR_000000001
Super-classes obo:CHEBI_16670c
Sub-classes obo:PR_000025471c
obo:PR_000023089c

DNA ligasec # Classes

URI http://purl.obolibrary.org/obo/PR_000023089
Super-classes obo:OBI_0000427c
obo:PR_000000001c
Restrictions obo:RO_0000085op some ()

nuclease S1c # Classes

URI http://purl.obolibrary.org/obo/PR_000025471
Super-classes obo:PR_000000001c

molecular label rolec # Classes

URI http://purl.obolibrary.org/obo/REO_0000171
Super-classes obo:BFO_0000023c
Sub-classes obo:OBI_0000250c

molecular labelc # Classes

URI http://purl.obolibrary.org/obo/REO_0000280
Super-classes obo:CHEBI_23367c

regionc # Classes

URI http://purl.obolibrary.org/obo/SO_0000001
Super-classes obo:BFO_0000031c
Sub-classes obo:OBI_0000811c
obo:OBI_0000845c

bloodc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000178
Super-classes obo:UBERON_0000463c

organism substancec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000463
Super-classes obo:UBERON_0000465c
Sub-classes obo:UBERON_0001088c
obo:UBERON_0000178c

material anatomical entityc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000465
Super-classes obo:BFO_0000040c
Sub-classes obo:UBERON_0000955c
obo:UBERON_0000463c
obo:UBERON_0000479c

anatomical clusterc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000477
Super-classes obo:BFO_0000040c

tissuec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000479
Super-classes obo:UBERON_0000465c

brainc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000955
Super-classes obo:UBERON_0000465c

urinec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001088
Super-classes obo:UBERON_0000463c

mass unitc # Classes

URI http://purl.obolibrary.org/obo/UO_0000002
Super-classes obo:IAO_0000003c

time unitc # Classes

URI http://purl.obolibrary.org/obo/UO_0000003
Super-classes obo:IAO_0000003c

concentration unitc # Classes

URI http://purl.obolibrary.org/obo/UO_0000051
Super-classes obo:IAO_0000003c

Subsetc # Classes

URI http://www.geneontology.org/formats/oboInOwl#Subset
Super-classes obo:IAO_0000102c

Thingc # Classes

URI http://www.w3.org/2002/07/owl#Thing

Object Properties

part ofop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000050
Inverse properties obo:BFO_0000051op

has partop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000051

realized inop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000054
Inverse properties obo:BFO_0000055op
Domain(s) obo:BFO_0000017c
Range(s) obo:BFO_0000015c

realizesop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000055
Domain(s) obo:BFO_0000015c
Range(s) obo:BFO_0000017c

preceded byop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000062
Inverse properties obo:BFO_0000063op
Domain(s) obo:BFO_0000003c
Range(s) obo:BFO_0000003c

precedesop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000063
Super-properties obo:RO_0002222op
Domain(s) obo:BFO_0000003c
Range(s) obo:BFO_0000003c

used_inop # OPs

URI http://purl.obolibrary.org/obo/ECO_9000000
Description

In the future we may use a more generic relation with weaker domain and range constraints taken from IAO, RO or OBI.

Inverse properties obo:ECO_9000001op
Domain(s) obo:ECO_0000000c
Range(s) obo:ECO_0000217c

usesop # OPs

URI http://purl.obolibrary.org/obo/ECO_9000001

has measurement unit labelop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000039
Super-properties obo:BFO_0000051op
Range(s) obo:IAO_0000003c

is aboutop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000136
Domain(s) obo:IAO_0000030c

is quality measurement ofop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000221
Super-properties obo:IAO_0000136op
Inverse properties obo:IAO_0000417op
Domain(s) obo:IAO_0000109c
Range(s) obo:BFO_0000019c

is duration ofop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000413
Super-properties obo:IAO_0000136op
Domain(s) obo:IAO_0000416c
Range(s) obo:BFO_0000015c

is quality measured asop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000417

has_specified_inputop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000293
Super-properties obo:RO_0000057op
Inverse properties obo:OBI_0000295op
Domain(s) obo:OBI_0000011c

is_specified_input_ofop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000295
Super-properties obo:RO_0000056op
Range(s) obo:OBI_0000011c

has_specified_outputop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000299
Super-properties obo:RO_0000057op
Inverse properties obo:OBI_0000312op
Domain(s) obo:OBI_0000011c

is_manufactured_byop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000304
Domain(s) obo:BFO_0000040c
Range(s) http://purl.obolibrary.org/obo/NCBITaxon_9606 http://purl.obolibrary.org/obo/OBI_0000245

is_specified_output_ofop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000312
Super-properties obo:RO_0000056op
Range(s) obo:OBI_0000011c

achieves_planned_objectiveop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000417
Inverse properties obo:OBI_0000833op
Domain(s) obo:OBI_0000011c
Range(s) obo:IAO_0000005c

has grainop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000643
Super-properties obo:BFO_0000051op

suppliesop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000646
Inverse properties obo:OBI_0000647op

has_supplierop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000647
Domain(s) obo:BFO_0000040c
Range(s) http://purl.obolibrary.org/obo/NCBITaxon_9606 http://purl.obolibrary.org/obo/OBI_0000245

objective_achieved_byop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000833
Domain(s) obo:IAO_0000005c
Range(s) obo:OBI_0000011c

has value specificationop # OPs

URI http://purl.obolibrary.org/obo/OBI_0001938
Super-properties obo:BFO_0000051op
Domain(s) obo:IAO_0000030c
Range(s) obo:OBI_0001933c

bound_toop # OPs

URI http://purl.obolibrary.org/obo/OBI_1110119
Domain(s) obo:BFO_0000040c
Range(s) obo:BFO_0000040c

inheres inop # OPs

URI http://purl.obolibrary.org/obo/RO_0000052
Inverse properties obo:RO_0000053op

bearer ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000053
Range(s) obo:BFO_0000020c

participates inop # OPs

URI http://purl.obolibrary.org/obo/RO_0000056
Inverse properties obo:RO_0000057op
Domain(s) obo:BFO_0000002c
Range(s) obo:BFO_0000003c

has participantop # OPs

URI http://purl.obolibrary.org/obo/RO_0000057
Domain(s) obo:BFO_0000003c
Range(s) obo:BFO_0000002c

is concretized asop # OPs

URI http://purl.obolibrary.org/obo/RO_0000058
Inverse properties obo:RO_0000059op
Domain(s) obo:BFO_0000031c
Range(s) obo:BFO_0000020c

concretizesop # OPs

URI http://purl.obolibrary.org/obo/RO_0000059
Domain(s) obo:BFO_0000020c
Range(s) obo:BFO_0000031c

function ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000079
Super-properties obo:RO_0000052op
Inverse properties obo:RO_0000085op
Domain(s) obo:BFO_0000034c

quality ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000080
Super-properties obo:RO_0000052op
Inverse properties obo:RO_0000086op

role ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000081
Super-properties obo:RO_0000052op
Inverse properties obo:RO_0000087op

has functionop # OPs

URI http://purl.obolibrary.org/obo/RO_0000085
Super-properties obo:RO_0000053op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000034c

has qualityop # OPs

URI http://purl.obolibrary.org/obo/RO_0000086
Super-properties obo:RO_0000053op
Range(s) obo:BFO_0000019c

has roleop # OPs

URI http://purl.obolibrary.org/obo/RO_0000087
Super-properties obo:RO_0000053op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000023c

has dispositionop # OPs

URI http://purl.obolibrary.org/obo/RO_0000091
Is Defined By http://purl.obolibrary.org/obo/ro.owl

derives fromop # OPs

URI http://purl.obolibrary.org/obo/RO_0001000
Super-properties owl:topObjectProperty
Inverse properties obo:RO_0001001op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000004c

derives intoop # OPs

URI http://purl.obolibrary.org/obo/RO_0001001

location ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0001015
Inverse properties obo:RO_0001025op

located inop # OPs

URI http://purl.obolibrary.org/obo/RO_0001025

immediately preceded byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002087
Super-properties obo:BFO_0000062op
Inverse properties obo:RO_0002090op

immediately precedesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002090
Super-properties obo:BFO_0000063op

regulatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002211

negatively regulatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002212
Super-properties obo:RO_0002211op

positively regulatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002213
Super-properties obo:RO_0002211op

temporal relationop # OPs

URI http://purl.obolibrary.org/obo/RO_0002222
Range(s) obo:BFO_0000003c

member ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002350
Super-properties obo:BFO_0000050op
Inverse properties obo:RO_0002351op

has memberop # OPs

URI http://purl.obolibrary.org/obo/RO_0002351
Super-properties obo:BFO_0000051op

Functional Properties

has measurement valuefp # FPs

URI http://purl.obolibrary.org/obo/IAO_0000004
Super-properties owl:topDataProperty
Domain(s) obo:IAO_0000032c
Range(s) xsd:doublec

Datatype Properties

has specified numeric valuedp # DPs

URI http://purl.obolibrary.org/obo/OBI_0001937
Super-properties obo:OBI_0002135dp
Domain(s) obo:OBI_0001933c
Range(s) owl:realc

has specified valuedp # DPs

URI http://purl.obolibrary.org/obo/OBI_0002135
Domain(s) obo:OBI_0001933c

Annotation Properties

has GO evidence codeap # APs

URI http://purl.obolibrary.org/obo/ECO_9000002

example of usageap # APs

URI http://purl.obolibrary.org/obo/IAO_0000112
Is Defined By http://purl.obolibrary.org/obo/iao.owl

definitionap # APs

URI http://purl.obolibrary.org/obo/IAO_0000115
Is Defined By http://purl.obolibrary.org/obo/iao.owl

term editorap # APs

URI http://purl.obolibrary.org/obo/IAO_0000117
Is Defined By http://purl.obolibrary.org/obo/iao.owl

definition sourceap # APs

URI http://purl.obolibrary.org/obo/IAO_0000119
Is Defined By http://purl.obolibrary.org/obo/iao.owl

ontology term requesterap # APs

URI http://purl.obolibrary.org/obo/IAO_0000234
Is Defined By IAO

go_groupingsap # APs

URI http://purl.obolibrary.org/obo/eco#go_groupings
Description

Grouping classes used by GO

Super-properties oboInOwl:SubsetPropertyap

valid_with_biological_processap # APs

URI http://purl.obolibrary.org/obo/eco#valid_with_biological_process
Description

GO biological process terms should be used in the GO with/from field

Super-properties oboInOwl:SubsetPropertyap

valid_with_cellular_componentap # APs

URI http://purl.obolibrary.org/obo/eco#valid_with_cellular_component
Description

GO cellular component terms should be used in the GO with/from field

Super-properties oboInOwl:SubsetPropertyap

valid_with_chemical_entityap # APs

URI http://purl.obolibrary.org/obo/eco#valid_with_chemical_entity
Description

Chemical entity IDs should be used in the GO with/from field

Super-properties oboInOwl:SubsetPropertyap

valid_with_geneap # APs

URI http://purl.obolibrary.org/obo/eco#valid_with_gene
Description

Gene IDs should be used in the GO with/from field

Super-properties oboInOwl:SubsetPropertyap

valid_with_molecular_functionap # APs

URI http://purl.obolibrary.org/obo/eco#valid_with_molecular_function
Description

GO molecular function terms should be used in the GO with/from field

Super-properties oboInOwl:SubsetPropertyap

valid_with_proteinap # APs

URI http://purl.obolibrary.org/obo/eco#valid_with_protein
Description

Protein IDs should be used in the GO with/from field

Super-properties oboInOwl:SubsetPropertyap

valid_with_protein_complexap # APs

URI http://purl.obolibrary.org/obo/eco#valid_with_protein_complex
Description

Protein complex IDs should be used in the GO with/from field

Super-properties oboInOwl:SubsetPropertyap

valid_with_transcriptap # APs

URI http://purl.obolibrary.org/obo/eco#valid_with_transcript
Description

Transcript IDs should be used in the GO with/from field

Super-properties oboInOwl:SubsetPropertyap

descriptionap # APs

URI http://purl.org/dc/elements/1.1/description

titleap # APs

URI http://purl.org/dc/elements/1.1/title

licenseap # APs

URI http://purl.org/dc/terms/license

subset_propertyap # APs

URI http://www.geneontology.org/formats/oboInOwl#SubsetProperty

auto-generated-byap # APs

URI http://www.geneontology.org/formats/oboInOwl#auto-generated-by

created_byap # APs

URI http://www.geneontology.org/formats/oboInOwl#created_by

creation_dateap # APs

URI http://www.geneontology.org/formats/oboInOwl#creation_date

dateap # APs

URI http://www.geneontology.org/formats/oboInOwl#date

default-namespaceap # APs

URI http://www.geneontology.org/formats/oboInOwl#default-namespace

has_alternative_idap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasAlternativeId

has_broad_synonymap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym

database_cross_referenceap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasDbXref

has_exact_synonymap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasExactSynonym

has_narrow_synonymap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym

has_obo_format_versionap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion

has_obo_namespaceap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasOBONamespace

idap # APs

URI http://www.geneontology.org/formats/oboInOwl#id

in_subsetap # APs

URI http://www.geneontology.org/formats/oboInOwl#inSubset

is_inferredap # APs

URI http://www.geneontology.org/formats/oboInOwl#is_inferred

saved-byap # APs

URI http://www.geneontology.org/formats/oboInOwl#saved-by

shorthandap # APs

URI http://www.geneontology.org/formats/oboInOwl#shorthand

commentap # APs

URI http://www.w3.org/2000/01/rdf-schema#comment

isDefinedByap # APs

URI http://www.w3.org/2000/01/rdf-schema#isDefinedBy

labelap # APs

URI http://www.w3.org/2000/01/rdf-schema#label

deprecatedap # APs

URI http://www.w3.org/2002/07/owl#deprecated

Namespaces

default (:)
http://purl.obolibrary.org/obo/eco.owl
dc
http://purl.org/dc/elements/1.1/
eco
http://purl.obolibrary.org/obo/eco#
obo
http://purl.obolibrary.org/obo/
oboInOwl
http://www.geneontology.org/formats/oboInOwl#
owl
http://www.w3.org/2002/07/owl#
prov
http://www.w3.org/ns/prov#
rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#
rdfs
http://www.w3.org/2000/01/rdf-schema#
sdo
http://schema.org/
skos
http://www.w3.org/2004/02/skos/core#
terms
http://purl.org/dc/terms/
xsd
http://www.w3.org/2001/XMLSchema#

Legend

cClasses
opObject Properties
fpFunctional Properties
dpData Properties
dpAnnotation Properties
pProperties
niNamed Individuals