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Metadata

URI
http://purl.obolibrary.org/obo/mmusdv.owl
Version URI
http://purl.obolibrary.org/obo/mmusdv/releases/2020-03-10/mmusdv.owl
Ontology RDF
RDF (turtle)

Table of Contents

  1. Classes
  2. Object Properties
  3. Annotation Properties
  4. Namespaces
  5. Legend

Overview

Pictures say 1,000 words
Figure 1: Ontology overview

Classes

mouse life cycle stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000000
Sub-classes obo:MmusDv_0000012c
obo:MmusDv_0000083c
obo:MmusDv_0000055c
obo:MmusDv_0000033c
obo:MmusDv_0000109c
obo:MmusDv_0000108c
obo:MmusDv_0000047c
obo:MmusDv_0000100c
obo:MmusDv_0000020c
obo:MmusDv_0000046c
obo:MmusDv_0000049c
obo:MmusDv_0000078c
obo:MmusDv_0000104c
obo:MmusDv_0000029c
obo:MmusDv_0000043c
obo:MmusDv_0000092c
obo:MmusDv_0000010c
obo:MmusDv_0000067c
obo:MmusDv_0000024c
obo:MmusDv_0000032c
obo:MmusDv_0000073c
obo:MmusDv_0000052c
obo:MmusDv_0000042c
obo:MmusDv_0000058c
obo:MmusDv_0000087c
obo:MmusDv_0000027c
obo:MmusDv_0000013c
obo:MmusDv_0000106c
obo:MmusDv_0000103c
obo:MmusDv_0000086c
obo:MmusDv_0000110c
obo:MmusDv_0000021c
obo:MmusDv_0000093c
obo:MmusDv_0000009c
obo:MmusDv_0000068c
obo:MmusDv_0000091c
obo:MmusDv_0000064c
obo:MmusDv_0000082c
obo:MmusDv_0000089c
obo:MmusDv_0000028c
obo:MmusDv_0000041c
obo:MmusDv_0000006c
obo:MmusDv_0000048c
obo:MmusDv_0000063c
obo:MmusDv_0000111c
obo:MmusDv_0000071c
obo:MmusDv_0000088c
obo:MmusDv_0000002c
obo:MmusDv_0000050c
obo:MmusDv_0000079c
obo:MmusDv_0000084c
obo:MmusDv_0000099c
obo:MmusDv_0000003c
obo:MmusDv_0000066c
obo:MmusDv_0000018c
obo:MmusDv_0000094c
obo:MmusDv_0000051c
obo:MmusDv_0000008c
obo:MmusDv_0000037c
obo:MmusDv_0000001c
obo:MmusDv_0000014c
obo:MmusDv_0000035c
obo:MmusDv_0000098c
obo:MmusDv_0000061c
obo:MmusDv_0000036c
obo:MmusDv_0000038c
obo:MmusDv_0000023c
obo:MmusDv_0000004c
obo:MmusDv_0000015c
obo:MmusDv_0000019c
obo:MmusDv_0000095c
obo:MmusDv_0000076c
obo:MmusDv_0000072c
obo:MmusDv_0000026c
obo:MmusDv_0000070c
obo:MmusDv_0000031c
obo:MmusDv_0000059c
obo:MmusDv_0000081c
obo:MmusDv_0000005c
obo:MmusDv_0000101c
obo:MmusDv_0000062c
obo:MmusDv_0000077c
obo:MmusDv_0000113c
obo:MmusDv_0000065c
obo:MmusDv_0000075c
obo:MmusDv_0000102c
obo:MmusDv_0000017c
obo:MmusDv_0000074c
obo:MmusDv_0000057c
obo:MmusDv_0000025c
obo:MmusDv_0000069c
obo:MmusDv_0000056c
obo:MmusDv_0000080c
obo:MmusDv_0000085c
obo:MmusDv_0000097c
obo:MmusDv_0000090c
obo:MmusDv_0000053c
obo:MmusDv_0000045c
obo:MmusDv_0000107c
obo:MmusDv_0000105c
obo:MmusDv_0000054c
obo:MmusDv_0000112c
obo:MmusDv_0000044c
obo:MmusDv_0000022c
obo:MmusDv_0000034c
obo:MmusDv_0000007c
obo:MmusDv_0000096c
obo:MmusDv_0000011c

mouse life cyclec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000001
Super-classes obo:MmusDv_0000000c

embryonic mouse stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000002
Description

By embryo we mean in the sense of up to the 2nd week postfertilization (beginning of Theiler stage 23), we treat fetus as a separate stage.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000042c

Theiler stage 01c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000003
Description

"Starts the mouse development sequence, range from embryonic age 0-0.9 dpc (day post coitum). Assumes that fertilization takes place around midnight during a 7pm to 5am dark cycle. Noon of the day on which the vaginal plug is found the embryos are aged 0.5 d.p.c (days post coitum)." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Timed_Pregnancy "adapted from"]

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000002c

cleavage stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000004
Description

The different cells derived from cleavage are called blastomeres and form a compact mass called the morula. Cleavage ends with the formation of the blastula.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000002c

Theiler stage 02c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000005
Description

Embryonic age 1 dpc (day post coitum).

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000003c
obo:BFO_0000050op some obo:MmusDv_0000004c

Theiler stage 03c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000006
Description

Embryonic age 2 dpc (day post coitum).

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000005c
obo:BFO_0000050op some obo:MmusDv_0000004c

blastula stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000007
Description

The blastula follows the morula and precedes the gastrula in the developmental sequence.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000002c

Theiler stage 04c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000008
Description

Embryonic age 3 dpc (day post coitum).

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000007c
obo:RO_0002087op some obo:MmusDv_0000006c

Theiler stage 05c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000009
Description

Embryonic age 4 dpc (day post coitum).

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000008c
obo:BFO_0000050op some obo:MmusDv_0000007c

Theiler stage 06c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000010
Description

Embryonic age 4.5 dpc (day post coitum). Refers to human CarnegieStage04.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000009c
obo:BFO_0000050op some obo:MmusDv_0000007c

Theiler stage 07c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000011
Description

Embryonic age 5 dpc (day post coitum). Refers to human CarnegieStage05.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000010c
obo:BFO_0000050op some obo:MmusDv_0000007c

Theiler stage 08c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000012
Description

Embryonic age 6 dpc (day post coitum). Refers to human CarnegieStage05.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000011c
obo:BFO_0000050op some obo:MmusDv_0000007c

gastrula stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000013
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000002c

Theiler stage 09c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000014
Description

Embryonic age 6.5 dpc (day post coitum).

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000012c
obo:BFO_0000050op some obo:MmusDv_0000013c

Theiler stage 10c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000015
Description

Embryonic age 7 dpc (day post coitum), (range 6.5-7.5 dpc). Refers to human CarnegieStage08.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000014c
obo:BFO_0000050op some obo:MmusDv_0000013c

neurula stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000016
Description

This term was obsoleted as it was the only child associated to MmusDv:0000017., This stage starts the emergence of the central nervous system at embryonic age 7.5 dpc (day post coitum).

Theiler stage 11c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000017
Description

This stage starts the emergence of the central nervous system at embryonic age 7.5 dpc (day post coitum).

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000002c
obo:RO_0002087op some obo:MmusDv_0000015c

organogenesis stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000018
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000095c
obo:BFO_0000050op some obo:MmusDv_0000002c

Theiler stage 12c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000019
Description

Embryonic age 8 dpc (day post coitum). Refers to human CarnegieStage09.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000018c
obo:RO_0002087op some obo:MmusDv_0000017c

Theiler stage 13c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000020
Description

Embryonic age 8.5 dpc (day post coitum). Refers to human CarnegieStage10.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000018c
obo:RO_0002087op some obo:MmusDv_0000019c

Theiler stage 14c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000021
Description

Embryonic age 9 dpc (day post coitum). Refers to human CarnegieStage11.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000018c
obo:RO_0002087op some obo:MmusDv_0000020c

Theiler stage 15c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000022
Description

Embryonic age 9.5 dpc (day post coitum). Refers to human CarnegieStage12.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000018c
obo:RO_0002087op some obo:MmusDv_0000021c

Theiler stage 16c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000023
Description

Embryonic age 10 dpc (day post coitum). Refers to human CarnegieStages 13 to 15.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000022c
obo:BFO_0000050op some obo:MmusDv_0000018c

Theiler stage 17c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000024
Description

Embryonic age 10.5 dpc (day post coitum). Refers to human CarnegieStages 13 to 15.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000023c
obo:BFO_0000050op some obo:MmusDv_0000018c

Theiler stage 18c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000025
Description

Embryonic age 11 dpc (day post coitum). Refers to human CarnegieStages 13 to 15.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000024c
obo:BFO_0000050op some obo:MmusDv_0000018c

Theiler stage 19c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000026
Description

Embryonic age 11.5 dpc (day post coitum). Refers to human CarnegieStage16.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000025c
obo:BFO_0000050op some obo:MmusDv_0000018c

Theiler stage 20c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000027
Description

Embryonic age 12 dpc (day post coitum). Refers to human CarnegieStage17.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000026c
obo:BFO_0000050op some obo:MmusDv_0000018c

Theiler stage 21c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000028
Description

Embryonic age 13 dpc (day post coitum). Refers to human CarnegieStages 18 and 19.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000018c
obo:RO_0002087op some obo:MmusDv_0000027c

Theiler stage 22c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000029
Description

Embryonic age 14 dpc (day post coitum). Refers to human CarnegieStages 20 to 23.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000028c
obo:BFO_0000050op some obo:MmusDv_0000018c

post-embryonic developmental stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000030
Description

This term was obsoleted to follow human developmental ontology structure.

fetal stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000031
Description

This stage describes the four Theiler stages that are commonly reported as equivalent to the human fetal period in the literature. They are anyway defined by embryonic days.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000042c

Theiler stage 23c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000032
Description

Embryonic age 15 dpc (day post coitum). Refers to the human fetal period.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000029c
obo:BFO_0000050op some obo:MmusDv_0000031c

Theiler stage 24c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000033
Description

Embryonic age 16 dpc (day post coitum). Refers to the human fetal period.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000031c
obo:RO_0002087op some obo:MmusDv_0000032c

Theiler stage 25c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000034
Description

Embryonic age 17 dpc (day post coitum). Refers to the human fetal period.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000031c
obo:RO_0002087op some obo:MmusDv_0000033c

Theiler stage 26c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000035
Description

TS26 is used for the period from embryonic day 18 up to birth itself. [https://github.com/tfhayamizu]

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000031c
obo:RO_0002087op some obo:MmusDv_0000034c

Theiler stage 27c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000036
Description

TS27 is used for postnatal days 0 through 3 (P0 to P3). This is a somewhat arbitrary cut-off but seems to best fit the data we have encountered. TS28 is then used from postnatal day 4 onward. [https://github.com/tfhayamizu]

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000035c
obo:BFO_0000050op some obo:MmusDv_0000092c

Theiler stage 28c # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000037
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000036c
obo:BFO_0000050op some obo:MmusDv_0000092c

infant stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000038
Description

This term was made obsolete due to discussion at https://github.com/obophenotype/developmental-stage-ontologies/issues/23. [ANiknejad]

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000043c
obo:RO_0002087op some obo:MmusDv_0000096c

adolescent stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000039
Description

This term was obsoleted as it is not fully accepted as a defined developmental stage in the literature. This stage describes the age at which mice are usually used as adolescent mouse models in the literature.

adult stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000040
Description

This term was obsoleted to include the mature stage into the ontology. Both terms have the same children, but contains of children (children of children) differ. The organisation of the postnatal development time in mouse is debatable, literature usually refers to mature or immature mice, with milestone around 6-8 weeks post-natal.

unknownc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000041
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000001c

prenatal stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000042
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000001c

immature stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000043
Description

This term was made obsolete and replaced by premature stage, starting at P4 instead of birth, due to TS28 definition. [ANiknejad]

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000092c

1-7 daysc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000044
Description

This term was made obsolete due to discussion at https://github.com/obophenotype/developmental-stage-ontologies/issues/23. [ANiknejad]

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000096c
obo:RO_0002087op some obo:MmusDv_0000036c

1 weekc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000045
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000112c
obo:RO_0002087op some obo:MmusDv_0000113c

2 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000046
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000112c
obo:RO_0002087op some obo:MmusDv_0000045c

3 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000047
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000046c
obo:BFO_0000050op some obo:MmusDv_0000112c

4 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000048
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000047c
obo:BFO_0000050op some obo:MmusDv_0000112c

5 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000049
Description

This stage is usually the stage during which the sexual maturity occurs.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000048c
obo:BFO_0000050op some obo:MmusDv_0000112c

6 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000050
Description

This stage is commonly considered in the literature as the milestone that distinguishes between sexually immmature and mature stages (see http://www.ahc.umn.edu/rar/breeding.html).

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000049c
obo:BFO_0000050op some obo:MmusDv_0000061c

7 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000051
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000061c
obo:RO_0002087op some obo:MmusDv_0000050c

8 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000052
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000062c
obo:RO_0002087op some obo:MmusDv_0000051c

9 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000053
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000062c
obo:RO_0002087op some obo:MmusDv_0000052c

10 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000054
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000062c
obo:RO_0002087op some obo:MmusDv_0000053c

11 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000055
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000062c
obo:RO_0002087op some obo:MmusDv_0000054c

12 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000056
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000055c
obo:BFO_0000050op some obo:MmusDv_0000063c

13 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000057
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000063c
obo:RO_0002087op some obo:MmusDv_0000056c

14 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000058
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000057c
obo:BFO_0000050op some obo:MmusDv_0000063c

15 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000059
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000058c
obo:BFO_0000050op some obo:MmusDv_0000063c

early adult stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000061
Description

Mice under 7 months of age are commonly considered as young adult in the literature, without loss of functional capability like hearing (see http://www.ncbi.nlm.nih.gov/pubmed/18259074).

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000110c

2 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000062
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000061c
obo:RO_0002087op some obo:MmusDv_0000051c

3 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000063
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000061c
obo:RO_0002087op some obo:MmusDv_0000062c

4 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000064
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000061c
obo:RO_0002087op some obo:MmusDv_0000063c

16 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000065
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000059c
obo:BFO_0000050op some obo:MmusDv_0000064c

17 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000066
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000064c
obo:RO_0002087op some obo:MmusDv_0000065c

18 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000067
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000064c
obo:RO_0002087op some obo:MmusDv_0000066c

19 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000068
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000064c
obo:RO_0002087op some obo:MmusDv_0000067c

5 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000069
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000061c
obo:RO_0002087op some obo:MmusDv_0000064c

20 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000070
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000064c
obo:RO_0002087op some obo:MmusDv_0000068c

21 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000071
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000069c
obo:RO_0002087op some obo:MmusDv_0000070c

22 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000072
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000071c
obo:BFO_0000050op some obo:MmusDv_0000069c

23 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000073
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000069c
obo:RO_0002087op some obo:MmusDv_0000072c

24 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000074
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000073c
obo:BFO_0000050op some obo:MmusDv_0000069c

middle aged stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000075
Description

This stage is commonly considered in the literature as the stage during which first evidence of loss of functional capability like hearing occurs in wild type mouse strain (see http://www.ncbi.nlm.nih.gov/pubmed/18259074).

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000097c

aged adult stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000076
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000097c
obo:RO_0002087op some obo:MmusDv_0000075c

6 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000077
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000069c
obo:BFO_0000050op some obo:MmusDv_0000061c

7 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000078
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000077c
obo:BFO_0000050op some obo:MmusDv_0000075c

8 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000079
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000075c
obo:RO_0002087op some obo:MmusDv_0000078c

9 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000080
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000075c
obo:RO_0002087op some obo:MmusDv_0000079c

10 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000081
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000075c
obo:RO_0002087op some obo:MmusDv_0000080c

11 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000082
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000081c
obo:BFO_0000050op some obo:MmusDv_0000075c

12 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000083
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000075c
obo:RO_0002087op some obo:MmusDv_0000082c

13 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000084
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000083c
obo:BFO_0000050op some obo:MmusDv_0000075c

14 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000085
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000084c
obo:BFO_0000050op some obo:MmusDv_0000075c

15 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000086
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000076c
obo:RO_0002087op some obo:MmusDv_0000085c

16 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000087
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000076c
obo:RO_0002087op some obo:MmusDv_0000086c

17 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000088
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000087c
obo:BFO_0000050op some obo:MmusDv_0000076c

18 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000089
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000088c
obo:BFO_0000050op some obo:MmusDv_0000076c

19 month-old stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000090
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000089c
obo:BFO_0000050op some obo:MmusDv_0000076c

20 month-old stage and overc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000091
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000076c
obo:RO_0002087op some obo:MmusDv_0000090c

postpartum stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000092
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000042c
obo:BFO_0000050op some obo:MmusDv_0000001c

Theiler stage 11bc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000093
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000017c
obo:RO_0002087op some obo:MmusDv_0000111c

Theiler stage 11cc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000094
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000017c
obo:RO_0002087op some obo:MmusDv_0000093c

Theiler stage 11dc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000095
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000017c
obo:RO_0002087op some obo:MmusDv_0000094c

early immature stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000096
Description

This term was made obsolete due to discussion at https://github.com/obophenotype/developmental-stage-ontologies/issues/23. [ANiknejad]

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000043c

late adult stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000097
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000110c

25 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000098
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000074c
obo:BFO_0000050op some obo:MmusDv_0000077c

26 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000099
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000077c
obo:RO_0002087op some obo:MmusDv_0000098c

27 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000100
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000099c
obo:BFO_0000050op some obo:MmusDv_0000077c

28 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000101
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000077c
obo:RO_0002087op some obo:MmusDv_0000100c

29 weeksc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000102
Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000101c
obo:BFO_0000050op some obo:MmusDv_0000077c

Theiler stage 09ac # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000103
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000014c

Theiler stage 09bc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000104
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000014c
obo:RO_0002087op some obo:MmusDv_0000103c

Theiler stage 10ac # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000105
Description

Refers to MS (mid-streak) stage in Downs and Davies staging of gastrulating mouse embryos (PMID: 8269852, 1993).

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000015c

Theiler stage 10bc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000106
Description

Refers to MS-LS (mid-streak to late streak) stage in Downs and Davies staging of gastrulating mouse embryos, 1993 (see http://www.ncbi.nlm.nih.gov/pubmed/8269852).

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000015c
obo:RO_0002087op some obo:MmusDv_0000105c

Theiler stage 10cc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000107
Description

Refers to MS-LS (mid-streak to late streak) stage in Downs and Davies staging of gastrulating mouse embryos, 1993 (see http://www.ncbi.nlm.nih.gov/pubmed/8269852).

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000106c
obo:BFO_0000050op some obo:MmusDv_0000015c

Theiler stage 12ac # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000108
Description

Embryonic age 8 dpc (day post coitum). Refers to human CarnegieStage09.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000019c

Theiler stage 12bc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000109
Description

Embryonic age 8 dpc (day post coitum). Refers to human CarnegieStage09.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000019c
obo:RO_0002087op some obo:MmusDv_0000108c

mature stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000110
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000037c
obo:RO_0002087op some obo:MmusDv_0000112c

Theiler stage 11ac # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000111
Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000017c

premature stagec # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000112
Description

It is commonly accepted that mouse reaches sexual maturity by six weeks of age (see http://www.ahc.umn.edu/rar/breeding.html). We start this stage at P4 because TS27 'newborn' stage is not defined as a postnatal stage.

Super-classes obo:MmusDv_0000000c
Restrictions obo:BFO_0000050op some obo:MmusDv_0000037c

4-7 daysc # Classes

URI http://purl.obolibrary.org/obo/MmusDv_0000113
Description

This stage starts at P4.

Super-classes obo:MmusDv_0000000c
Restrictions obo:RO_0002087op some obo:MmusDv_0000036c
obo:BFO_0000050op some obo:MmusDv_0000112c

Object Properties

part ofop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000050

preceded_byop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000062

immediately_preceded_byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002087
Super-properties obo:BFO_0000062op

Annotation Properties

definitionap # APs

URI http://purl.obolibrary.org/obo/IAO_0000115

term replaced byap # APs

URI http://purl.obolibrary.org/obo/IAO_0100001

EXACT%5B%5Dap # APs

URI http://purl.obolibrary.org/obo/mmusdv#EXACT%5B%5D

end, days post coitumap # APs

URI http://purl.obolibrary.org/obo/mmusdv#end_dpc
Description

This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.

end, months post birthap # APs

URI http://purl.obolibrary.org/obo/mmusdv#end_mpb
Description

This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.

end, weeks post birthap # APs

URI http://purl.obolibrary.org/obo/mmusdv#end_wpb
Description

This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.

end_ypbap # APs

URI http://purl.obolibrary.org/obo/mmusdv#end_ypb

granular_stageap # APs

URI http://purl.obolibrary.org/obo/mmusdv#granular_stage
Description

Subset consisting of classes describing highly granular developmental stages (for instance, '23-year-old'). Such stages might be useful for annotation purpose, but might be folded into less granular parents for display purpose.

Super-properties oboInOwl:SubsetPropertyap

has end timeap # APs

URI http://purl.obolibrary.org/obo/mmusdv#has_end_time

has_stage_markerap # APs

URI http://purl.obolibrary.org/obo/mmusdv#has_stage_marker

has start timeap # APs

URI http://purl.obolibrary.org/obo/mmusdv#has_start_time

has unitap # APs

URI http://purl.obolibrary.org/obo/mmusdv#has_unit
Description

Used to associate a measurement property (e.g. days post fertilization) with a unit (e.g. days)

start, days post coitumap # APs

URI http://purl.obolibrary.org/obo/mmusdv#start_dpc
Description

This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.

start, days post fertilizationap # APs

URI http://purl.obolibrary.org/obo/mmusdv#start_dpf
Description

This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.

start, months post birthap # APs

URI http://purl.obolibrary.org/obo/mmusdv#start_mpb
Description

This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.

start, weeks post birthap # APs

URI http://purl.obolibrary.org/obo/mmusdv#start_wpb
Description

This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.

subset_propertyap # APs

URI http://www.geneontology.org/formats/oboInOwl#SubsetProperty

considerap # APs

URI http://www.geneontology.org/formats/oboInOwl#consider

dateap # APs

URI http://www.geneontology.org/formats/oboInOwl#date

default-namespaceap # APs

URI http://www.geneontology.org/formats/oboInOwl#default-namespace

database_cross_referenceap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasDbXref

has_exact_synonymap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasExactSynonym

has_narrow_synonymap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym

has_obo_format_versionap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion

has_obo_namespaceap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasOBONamespace

idap # APs

URI http://www.geneontology.org/formats/oboInOwl#id

in_subsetap # APs

URI http://www.geneontology.org/formats/oboInOwl#inSubset

is_metadata_tagap # APs

URI http://www.geneontology.org/formats/oboInOwl#is_metadata_tag

saved-byap # APs

URI http://www.geneontology.org/formats/oboInOwl#saved-by

shorthandap # APs

URI http://www.geneontology.org/formats/oboInOwl#shorthand

commentap # APs

URI http://www.w3.org/2000/01/rdf-schema#comment

labelap # APs

URI http://www.w3.org/2000/01/rdf-schema#label

deprecatedap # APs

URI http://www.w3.org/2002/07/owl#deprecated

Namespaces

default (:)
http://purl.obolibrary.org/obo/mmusdv.owl
B
http://purl.obolibrary.org/obo/mmusdv#EXACT%5B%5
dct
http://purl.org/dc/terms/
mmusdv
http://purl.obolibrary.org/obo/mmusdv#
obo
http://purl.obolibrary.org/obo/
oboInOwl
http://www.geneontology.org/formats/oboInOwl#
owl
http://www.w3.org/2002/07/owl#
prov
http://www.w3.org/ns/prov#
rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#
rdfs
http://www.w3.org/2000/01/rdf-schema#
sdo
https://schema.org/
skos
http://www.w3.org/2004/02/skos/core#
xsd
http://www.w3.org/2001/XMLSchema#

Legend

cClasses
opObject Properties
fpFunctional Properties
dpData Properties
dpAnnotation Properties
pProperties
niNamed Individuals