IRI:
http://purl.obolibrary.org/obo/ms.owl
Version IRI:
http://purl.obolibrary.org/obo/ms/4.1.75/ms.owl
Imported Ontologies :
http://purl.obolibrary.org/obo/pato.owl (visualise it with LODE )
http://purl.obolibrary.org/obo/stato.owl (visualise it with LODE )
http://purl.obolibrary.org/obo/uo.owl (visualise it with LODE )
Other visualisation :
Ontology source - WebVowl

Abstract

For any queries contact psidev-ms-vocab@lists.sourceforge.net

Table of Content

  1. Classes
  2. Object Properties
  3. Annotation Properties
  4. Namespace Declarations

Classes

((?<=D))|((?=D))c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001334

has super-classes
Cleavage agent regular expressionc

(?<=[^E]E)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001959

has super-classes
Cleavage agent regular expressionc

(?<=[ALIV])(?c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001957

has super-classes
Cleavage agent regular expressionc

(?<=[BDEZ])(?!P)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001340

has super-classes
Cleavage agent regular expressionc

(?<=[EZ])(?!P)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001341

has super-classes
Cleavage agent regular expressionc

(?<=[FL])c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001337

has super-classes
Cleavage agent regular expressionc

(?<=[FYWL])(?!P)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001332

has super-classes
Cleavage agent regular expressionc

(?<=[FYWLKR])(?!P)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001338

has super-classes
Cleavage agent regular expressionc

(?<=[HKR]P)(?c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001958

has super-classes
Cleavage agent regular expressionc

(?<=[KR])c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001339

has super-classes
Cleavage agent regular expressionc

(?<=[KR])(?!P)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001176

has super-classes
Cleavage agent regular expressionc

(?<=K)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001336

has super-classes
Cleavage agent regular expressionc

(?<=K)(?!P)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001335

has super-classes
Cleavage agent regular expressionc

(?<=M)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001333

has super-classes
Cleavage agent regular expressionc

(?<=R)(?!P)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001272

has super-classes
Cleavage agent regular expressionc

(?<=W)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001960

has super-classes
Cleavage agent regular expressionc

(?=[BD])c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001273

has super-classes
Cleavage agent regular expressionc

(?=[DE])c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001274

has super-classes
Cleavage agent regular expressionc

(?=[KR])c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002707

has super-classes
Cleavage agent regular expressionc

1200 series LC/MSD SLc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000467

has super-classes
Agilent instrument modelc

1200 series LC/MSD VLc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000478

has super-classes
Agilent instrument modelc

16-bit floatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000520

has super-classes
binary data typec

2-iodobenzoatec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001918

has super-classes
cleavage agent namec
has regexpop some (?<=W)c

2000 QTRAPc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002577

has super-classes
SCIEX instrument modelc

2500 QTRAPc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002578

has super-classes
SCIEX instrument modelc

2E Mass Spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000321

This child of the former purgatory term m/z Separation Method was made obsolete.

3100c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001786

has super-classes
Waters instrument modelc

32-bit floatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000521

has super-classes
binary data typec

32-bit integerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000519

has super-classes
binary data typec

3200 QTRAPc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000651

has super-classes
SCIEX instrument modelc

3500 QTRAPc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002579

has super-classes
SCIEX instrument modelc

4000 QTRAPc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000139

has super-classes
SCIEX instrument modelc

4000 QTRAPc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000870

This term was obsoleted because was redundant to MS:1000139.
has super-classes
SCIEX instrument modelc

4000 Series Explorer Softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000659

has super-classes
SCIEX softwarec
acquisition softwarec
analysis softwarec
data processing softwarec

4700 Explorerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000537

has super-classes
Applied Biosystems softwarec
acquisition softwarec
analysis softwarec
data processing softwarec

4700 Proteomics Analyzerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000140

has super-classes
Applied Biosystems instrument modelc

4800 Plus MALDI TOF/TOFc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000652

has super-classes
SCIEX instrument modelc

4800 Proteomics Analyzerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000658

has super-classes
Applied Biosystems instrument modelc

5800 TOF/TOFc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001482

has super-classes
SCIEX instrument modelc

6110 Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000468

has super-classes
Agilent instrument modelc

6120A Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000469

has super-classes
Agilent instrument modelc

6120B Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002794

has super-classes
Agilent instrument modelc

6130 Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000470

has super-classes
Agilent instrument modelc

6140 Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000471

has super-classes
Agilent instrument modelc

6150 Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002795

has super-classes
Agilent instrument modelc

6210 Time-of-Flight LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000472

has super-classes
Agilent instrument modelc

6220 Time-of-Flight LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000675

has super-classes
Agilent instrument modelc

6224 Time-of-Flight LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002796

has super-classes
Agilent instrument modelc

6230A Time-of-Flight LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002797

has super-classes
Agilent instrument modelc

6230B Time-of-Flight LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002798

has super-classes
Agilent instrument modelc

6300 Series Ion Trap Data Analysis Softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000688

has super-classes
Agilent softwarec
acquisition softwarec
analysis softwarec
data processing softwarec

6310 Ion Trap LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000473

has super-classes
Agilent instrument modelc

6320 Ion Trap LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000474

has super-classes
Agilent instrument modelc

6330 Ion Trap LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000475

has super-classes
Agilent instrument modelc

6340 Ion Trap LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000476

has super-classes
Agilent instrument modelc

64-bit floatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000523

has super-classes
binary data typec

64-bit integerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000522

has super-classes
binary data typec

6410 Triple Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000477

has super-classes
Agilent instrument modelc

6420 Triple Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002444

has super-classes
Agilent instrument modelc

6430 Triple Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002799

has super-classes
Agilent instrument modelc

6460 Triple Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002445

has super-classes
Agilent instrument modelc

6490 Triple Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002446

has super-classes
Agilent instrument modelc

6495A Triple Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002800

has super-classes
Agilent instrument modelc

6495B Triple Quadrupole LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002801

has super-classes
Agilent instrument modelc

6510 Quadrupole Time-of-Flight LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000676

has super-classes
Agilent instrument modelc

6520A Quadrupole Time-of-Flight LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000677

has super-classes
Agilent instrument modelc

6520B Q-TOF LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002785

has super-classes
Agilent instrument modelc

6530A Q-TOF LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002786

has super-classes
Agilent instrument modelc

6530B Q-TOF LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002787

has super-classes
Agilent instrument modelc

6538 Q-TOF LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002788

has super-classes
Agilent instrument modelc

6540 Q-TOF LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002789

has super-classes
Agilent instrument modelc

6542 Q-TOF LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002790

has super-classes
Agilent instrument modelc

6545 Q-TOF LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002791

has super-classes
Agilent instrument modelc

6550 iFunnel Q-TOF LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002783

has super-classes
Agilent instrument modelc

6550A iFunnel Q-TOF LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002784

has super-classes
Agilent instrument modelc

6560 Q-TOF LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002792

has super-classes
Agilent instrument modelc

6570 Q-TOF LC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002793

has super-classes
Agilent instrument modelc

7000A Triple Quadrupole GC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002802

has super-classes
Agilent instrument modelc

7000B Triple Quadrupole GC/MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002803

has super-classes
Agilent instrument modelc

7800 Quadrupole ICP-MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002804

has super-classes
Agilent instrument modelc

8800 Triple Quadrupole ICP-MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002805

has super-classes
Agilent instrument modelc

AA sequencec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001344

has super-classes
database sequence detailsc

AAIndex mass tablec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001346

has super-classes
mass table sourcec

ABI WIFF formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000562

has super-classes
mass spectrometer file formatc

absolute quantitation analysisc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002514

has super-classes
quantitation analysis summaryc

absolute quantityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001137

has super-classes
quantification datatypec
has value typeop some xsd doublec

absorption chromatogramc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000812

has super-classes
electromagnetic radiation chromatogramc

absorption spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000806

has super-classes
data file contentc
spectrum typec

Accela PDAc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000623

has super-classes
Thermo Scientific instrument modelc

accelerating voltagec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000304

has super-classes
ion optics attributec
has_unitsop some u o 0000218c
has value typeop some xsd floatc

accelerator mass spectrometryc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000238

This child of the former purgatory term mass spectrometer was made obsolete.

Accepted manuscriptc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002865

has super-classes
Experiment additional parameterc

accuracyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000014

has super-classes
mass analyzer attributec
has_unitsop some m/zc
has_unitsop some u o 0000169c
has value typeop some xsd floatc

accurate massc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000207

This child of the former purgatory term ion attribute was made obsolete.
has super-classes
has_unitsop some u o 0000002c
has value typeop some xsd floatc

acquisition parameterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001954

has super-classes
has value typeop some xsd stringc
part_ofop some spectrum generation informationc
has sub-classes
mass spectrometry acquisition methodc

acquisition softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001455

has super-classes
softwarec
has sub-classes
4000 Series Explorer Softwarec, 4700 Explorerc, 6300 Series Ion Trap Data Analysis Softwarec, Analystc, ChromaTOF HRT softwarec, ChromaTOF softwarec, Data Explorerc, FlexControlc, GPS Explorerc, HCTcontrolc, MALDI Solutionsc, MALDI Solutions LC-MALDIc, MassHunter Data Acquisitionc, MassHunter Easy Accessc, MassLynxc, SCIEX TOF/TOF Series Explorer Softwarec, Voyager Biospectrometry Workstation Systemc, Xcaliburc, apexControlc, dpControlc, esquireControlc, micrOTOFcontrolc, spControlc

Acquity SQDc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001787

has super-classes
Waters instrument modelc

Acquity TQDc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001788

has super-classes
Waters instrument modelc

ACQUITY UPLCc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001761

has super-classes
Waters instrument modelc

Acquity UPLC FLRc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000819

has super-classes
Waters instrument modelc
fluorescence detectorc

ACQUITY UPLC H-Classc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001762

has super-classes
Waters instrument modelc

ACQUITY UPLC H-Class Bioc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001763

has super-classes
Waters instrument modelc

ACQUITY UPLC I-Classc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001764

has super-classes
Waters instrument modelc

Acquity UPLC PDAc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000818

has super-classes
Waters instrument modelc
photodiode array detectorc

ACQUITY UPLC Systems with 2D Technologyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001765

has super-classes
Waters instrument modelc

activation energyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000509

has super-classes
precursor activation attributec
has_unitsop some u o 0000266c
has value typeop some xsd floatc

add_othersc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001326

This former purgatory term was made obsolete.

Additional associated raw file URIc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002859

has super-classes
Associated file URIc
has value typeop some xsd stringc

additional descriptionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000461

This former purgatory term was made obsolete.

adductc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003055

has super-classes
moleculec
has sub-classes
adduct ionc

adduct deconvolutionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003220

has super-classes
data processing actionc

adduct ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000353

has super-classes
adductc
has sub-classes
negative mode adduct ionc, positive mode adduct ionc

adduct ion attributec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002809

has super-classes
part_ofop some adduct ionc
has sub-classes
adduct ion formulac

adduct ion formulac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002813

has super-classes
adduct ion attributec
has regexpop some Regular expression for adduct ion formulac
has value typeop some xsd stringc

adduct ion isotopec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002811

has super-classes
adduct ion propertyc
has value typeop some xsd stringc

adduct ion massc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003243

has super-classes
adduct ion propertyc
has value typeop some xsd floatc

adduct ion propertyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003056

has super-classes
part_ofop some adduct ionc
has sub-classes
adduct ion X m/zc, adduct ion isotopec, adduct ion massc

adduct ion X m/zc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002810

has super-classes
adduct ion propertyc
has value typeop some xsd stringc

adiabatic ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000380

has super-classes
ionization typec

Agilent instrument modelc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000490

has super-classes
instrument modelc
has sub-classes
1200 series LC/MSD SLc, 1200 series LC/MSD VLc, 6110 Quadrupole LC/MSc, 6120A Quadrupole LC/MSc, 6120B Quadrupole LC/MSc, 6130 Quadrupole LC/MSc, 6140 Quadrupole LC/MSc, 6150 Quadrupole LC/MSc, 6210 Time-of-Flight LC/MSc, 6220 Time-of-Flight LC/MSc, 6224 Time-of-Flight LC/MSc, 6230A Time-of-Flight LC/MSc, 6230B Time-of-Flight LC/MSc, 6310 Ion Trap LC/MSc, 6320 Ion Trap LC/MSc, 6330 Ion Trap LC/MSc, 6340 Ion Trap LC/MSc, 6410 Triple Quadrupole LC/MSc, 6420 Triple Quadrupole LC/MSc, 6430 Triple Quadrupole LC/MSc, 6460 Triple Quadrupole LC/MSc, 6490 Triple Quadrupole LC/MSc, 6495A Triple Quadrupole LC/MSc, 6495B Triple Quadrupole LC/MSc, 6510 Quadrupole Time-of-Flight LC/MSc, 6520A Quadrupole Time-of-Flight LC/MSc, 6520B Q-TOF LC/MSc, 6530A Q-TOF LC/MSc, 6530B Q-TOF LC/MSc, 6538 Q-TOF LC/MSc, 6540 Q-TOF LC/MSc, 6542 Q-TOF LC/MSc, 6545 Q-TOF LC/MSc, 6550 iFunnel Q-TOF LC/MSc, 6550A iFunnel Q-TOF LC/MSc, 6560 Q-TOF LC/MSc, 6570 Q-TOF LC/MSc, 7000A Triple Quadrupole GC/MSc, 7000B Triple Quadrupole GC/MSc, 7800 Quadrupole ICP-MSc, 8800 Triple Quadrupole ICP-MSc

Agilent MassHunter formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001509

has super-classes
mass spectrometer file formatc

Agilent MassHunter nativeID formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001508

has super-classes
native spectrum identifier formatc

Agilent softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000689

has super-classes
softwarec
has sub-classes
6300 Series Ion Trap Data Analysis Softwarec, Genespring MSc, METLINc, MassHunter BioConfirmc, MassHunter Data Acquisitionc, MassHunter Easy Accessc, MassHunter Mass Profilerc, MassHunter Metabolite IDc, MassHunter Qualitative Analysisc, MassHunter Quantitative Analysisc, Spectrum Mill for MassHunter Workstationc

ALEXc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002976

has super-classes
data processing softwarec
lipidomics analysis softwarec

ALEX123c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002977

has super-classes
data processing softwarec
lipidomics analysis softwarec

alpha-cleavagec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000410

This child of the former purgatory term ion reaction was made obsolete.

AltACc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0001014

has super-classes
PEFF file sequence entry termc
has value typeop some xsd stringc

alternate massc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001361

has super-classes
ambiguous residuesc
has_unitsop some u o 0000221c
has value typeop some xsd doublec

alternate single letter codesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001360

has super-classes
ambiguous residuesc
has value typeop some xsd stringc

alternatingc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000466

This term was made obsolete because .

alternating polarity modec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002833

has super-classes
run attributec

Amandac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002336

has super-classes
analysis softwarec

Amanda:AmandaScorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002319

has super-classes
PSM-level search engine specific statisticc
has value typeop some xsd doublec

amaZon ETDc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001542

has super-classes
Bruker Daltonics amaZon seriesc

amaZon Speedc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002301

has super-classes
Bruker Daltonics amaZon seriesc

amaZon Speed ETDc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002300

has super-classes
Bruker Daltonics amaZon seriesc

amaZon Xc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001546

has super-classes
Bruker Daltonics amaZon seriesc

ambiguous residuesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001359

has super-classes
part_ofop some spectrum interpretationc
has sub-classes
alternate massc, alternate single letter codesc

amino acidc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003039

has super-classes
small moleculec

aminoxyTMT quantitation analysisc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002758

has super-classes
isobaric label quantitation analysisc

analog ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000355

This child of the former purgatory term ion chemical type was made obsolete.

analog-digital converterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000117

has super-classes
detector acquisition modec

analysis attributec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002687

has super-classes
spectrum identification result detailsc
has sub-classes
PTM localization attributec, identification attributec

analysis softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001456

has super-classes
softwarec
has sub-classes
4000 Series Explorer Softwarec, 4700 Explorerc, 6300 Series Ion Trap Data Analysis Softwarec, Amandac, Analystc, Andromedac, Ascore softwarec, BioAnalystc, BioToolsc, Bioworksc, Byonicc, CAMERAc, CLINPROTc, CLINPROT microc, ChromaTOF HRT softwarec, ChromaTOF softwarec, Cometc, Compassc, Compass OpenAccessc, Compass for HCT/esquirec, Compass for micrOTOFc, DTASelectc, Data Explorerc, DataAnalysisc, DeBunkerc, DirecTagc, EPIFANYc, Empowerc, FlexAnalysisc, GPS Explorerc, Genespring MSc, IdentiPyc, IsobariQc, LightSight Softwarec, MALDI Solutionsc, MALDI Solutions LC-MALDIc, METLINc, MRMPilot Softwarec, MS-GFc, MS-GF+c, MSDKc, MSFraggerc, MSPathFinderc, MSQuantc, MSnbasec, MZminec, Maltcmsc, MarkerView Softwarec, Mascotc, Mascot Distillerc, Mascot Integrac, Mascot Parserc, MassHunter BioConfirmc, MassHunter Mass Profilerc, MassHunter Metabolite IDc, MassHunter Qualitative Analysisc, MassHunter Quantitative Analysisc, MassLynxc, Mauic, MaxQuantc, MetaMorpheusc, Morpheusc, MultiQuantc, MyriMatchc, NIST MSPepSearchc, Novorc, OMSSAc, PAnalyzerc, PEAKS Nodec, PEAKS Onlinec, PEAKS Studioc, PIAc, PTX-QCc, PatternLabc, PeakForestc, PepNovoc, Pepitomec, PeptideShakerc, Percolatorc, Phenyxc, Philosopherc, PinPointc, Pro BLASTc, Pro ICATc, Pro IDc, Pro Quantc, ProLuCIDc, ProSightc, ProfileAnalysisc, Prolinec, ProteinExtractorc, ProteinLynx Global Serverc, ProteinPilot Softwarec, ProteinProspectorc, ProteinScapec, Proteiosc, ProteoWizard softwarec, Proteome Discovererc, QuaMeter IDFreec, QuantAnalysisc, SCIEX TOF/TOF Series Explorer Softwarec, SCiLS Labc, SEQUESTc, SIM-XLc, SQIDc, Scaffoldc, Skyline mzQuantML converterc, SpectraSTc, Spectrum Mill for MassHunter Workstationc, TDPortalc, TOPP softwarec, TagReconc, Tidec, TissueView Softwarec, TopFDc, TopMGc, TopPICc, Trans-Proteomic Pipelinec, Trans-Proteomic Pipeline softwarec, UNIFYc, Voyager Biospectrometry Workstation Systemc, X!Tandemc, XCMSc, Xcaliburc, flexImagingc, greylagc, i3tmsc, iMonDBc, mzRc, mzidLibc, pFindc, pNovoc, pyteomicsc, small molecule analysis softwarec, xic, xiFDRc

Analystc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000551

has super-classes
SCIEX softwarec
acquisition softwarec
analysis softwarec
data processing softwarec

analyte mixture membersc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003163

has super-classes
interpreted spectrum attributec
has value typeop some list of integersc

analyzer scan offsetc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000803

has super-classes
scan attributec
has_unitsop some m/zc
has value typeop some xsd floatc

analyzer typec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000010

This former purgatory term was made obsolete.

anchor proteinc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001591

has super-classes
protein group or subset relationshipc
has value typeop some xsd stringc

Andi-CHROM formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002443

has super-classes
chromatograph file formatc

Andi-MS formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002441

has super-classes
mass spectrometer file formatc

Andromedac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002337

has super-classes
analysis softwarec

Andromeda peptide PEPc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003098

has super-classes
search engine specific peptide sequence-level identification statisticc
has value typeop some xsd doublec

Andromeda result formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002576

has super-classes
intermediate analysis formatc

Andromeda:apl file formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002996

has super-classes
mass spectrometer file formatc

Andromeda:PEPc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002995

has super-classes
PSM-level search engine specific statisticc
has_domainop some value between 0 and 1 inclusivec
has_orderop some higher score betterc
has value typeop some xsd doublec

Andromeda:scorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002338

has super-classes
PSM-level search engine specific statisticc
has_orderop some higher score betterc
has value typeop some xsd doublec

ANOVA p-valuec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001854

has super-classes
p-valuec
has value typeop some xsd doublec

ANOVA-testc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002071

has super-classes
quantification data processingc
has value typeop some xsd stringc

anti-aromatic ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000356

This child of the former purgatory term ion chemical type was made obsolete.

Anubisc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002410

has super-classes
SRM softwarec
quantitation software namec

apex IVc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000141

has super-classes
Bruker Daltonics apex seriesc

apex Qc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000142

has super-classes
Bruker Daltonics apex seriesc

apex ultrac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000695

has super-classes
Bruker Daltonics apex seriesc

APEX valuec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001906

has super-classes
protein-level quantification datatypec
has value typeop some xsd doublec

apexControlc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000706

has super-classes
Bruker softwarec
acquisition softwarec

API 100c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002585

has super-classes
SCIEX instrument modelc

API 100LCc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002586

has super-classes
SCIEX instrument modelc

API 150EXc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000143

has super-classes
SCIEX instrument modelc

API 150EX Prepc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000144

has super-classes
SCIEX instrument modelc

API 165c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002587

has super-classes
SCIEX instrument modelc

API 2000c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000145

has super-classes
SCIEX instrument modelc

API 300c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002588

has super-classes
SCIEX instrument modelc

API 3000c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000146

has super-classes
SCIEX instrument modelc

API 3200c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000653

has super-classes
SCIEX instrument modelc

API 350c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002589

has super-classes
SCIEX instrument modelc

API 365c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002590

has super-classes
SCIEX instrument modelc

API 4000c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000147

has super-classes
SCIEX instrument modelc

API 5000c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000654

has super-classes
SCIEX instrument modelc

appearance energyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000209

This child of the former purgatory term ion attribute was made obsolete.
has super-classes
has_unitsop some u o 0000266c
has value typeop some xsd floatc

Applied Biosystems instrument modelc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000495

has super-classes
instrument modelc
has sub-classes
4700 Proteomics Analyzerc, 4800 Proteomics Analyzerc, Voyager-DE PROc, Voyager-DE STRc

Applied Biosystems softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000691

has super-classes
softwarec
has sub-classes
4700 Explorerc, Data Explorerc, Voyager Biospectrometry Workstation Systemc

area normalizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001999

has super-classes
intensity normalizationc

area peak pickingc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000801

has super-classes
peak pickingc
has sub-classes
sophisticated numerical annotation procedurec

Arg-Cc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001303

has super-classes
cleavage agent namec
has regexpop some (?<=R)(?!P)c

aromatic ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000354

This child of the former purgatory term ion chemical type was made obsolete.

array detectorc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000345

has super-classes
detector typec
has sub-classes
microchannel plate detectorc, photodiode array detectorc

ASAPRatioc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002574

has super-classes
Trans-Proteomic Pipeline softwarec

Ascorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001985

has super-classes
PTM localization PSM-level statisticc
has regexpop some regular expression for modification localization scoringc
has value typeop some xsd stringc

Ascore softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001984

has super-classes
analysis softwarec

Ascore thresholdc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002556

has super-classes
PTM localization score thresholdc
has value typeop some xsd doublec

ASN.1c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001349

has super-classes
database file formatsc

Asp-Nc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001304

has super-classes
cleavage agent namec
has regexpop some (?=[BD])c

Asp-N_ambicc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001305

has super-classes
cleavage agent namec
has regexpop some (?=[DE])c

assay attributec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002110

has super-classes
quantification object attributec

assay label attributec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002111

has super-classes
quantification object attributec
has sub-classes
sample labelc

assigned intensity fractionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003166

has super-classes
interpreted spectrum attributec
has value typeop some xsd floatc

Associated file URIc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002845

has super-classes
Experiment additional parameterc
has value typeop some xsd stringc
has sub-classes
Additional associated raw file URIc, Associated raw file URIc, Gel image file URIc, Other type file URIc, Peak list file URIc, Result file URIc, Search engine output file URIc

Associated raw file URIc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002846

has super-classes
Associated file URIc
has value typeop some xsd stringc

association reactionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000409

This child of the former purgatory term ion reaction was made obsolete.

associative ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000381

has super-classes
ionization typec

ATAQSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000925

has super-classes
SRM softwarec

atmospheric pressure chemical ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000070

has super-classes
atmospheric pressure ionizationc

atmospheric pressure ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000240

has super-classes
ionization typec
has sub-classes
atmospheric pressure chemical ionizationc, atmospheric pressure matrix-assisted laser desorption ionizationc, atmospheric pressure photoionizationc, desorption electrospray ionizationc

atmospheric pressure matrix-assisted laser desorption ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000239

has super-classes
atmospheric pressure ionizationc

atmospheric pressure photoionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000382

has super-classes
atmospheric pressure ionizationc

Atmostpheric Pressure Photoionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000241

This term was made obsolete because it was replaced by atmospheric pressure photoionization (MS:1000382).

atomc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003034

has super-classes
molecular entityc

attenuationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000848

has super-classes
laser attributec
has_unitsop some u o 0000187c
has value typeop some xsd floatc

attribute coefficient of variationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003178

has super-classes
has value typeop some xsd floatc
has value typeop some xsd intc
part_ofop some spectral library attributec

attribute maximumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003174

has super-classes
has value typeop some xsd floatc
has value typeop some xsd intc
part_ofop some spectral library attributec

attribute meanc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003176

has super-classes
has value typeop some xsd floatc
has value typeop some xsd intc
part_ofop some spectral library attributec

attribute medianc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003180

has super-classes
has value typeop some xsd floatc
has value typeop some xsd intc
part_ofop some spectral library attributec

attribute minimumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003175

has super-classes
has value typeop some xsd floatc
has value typeop some xsd intc
part_ofop some spectral library attributec

attribute standard deviationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003177

has super-classes
has value typeop some xsd floatc
has value typeop some xsd intc
part_ofop some spectral library attributec

attribute summary valuec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003179

has super-classes
has value typeop some xsd floatc
has value typeop some xsd intc
part_ofop some spectral library attributec

Auto Spec Ultima NTc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000150

has super-classes
Waters instrument modelc

autodetachmentc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000383

has super-classes
ionization typec

autoflexc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001555

has super-classes
Bruker Daltonics flex seriesc

autoflex IIc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000148

has super-classes
Bruker Daltonics flex seriesc

autoflex II TOF/TOFc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001553

has super-classes
Bruker Daltonics flex seriesc

autoflex III smartbeamc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000696

has super-classes
Bruker Daltonics flex seriesc

autoflex III TOF/TOF smartbeamc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001554

has super-classes
Bruker Daltonics flex seriesc

autoflex TOF/TOFc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000149

has super-classes
Bruker Daltonics flex seriesc

autoionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000384

has super-classes
ionization typec

AutoSpec Premierc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002277

has super-classes
Waters instrument modelc

average m/z deviationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003210

has super-classes
interpreted spectrum attributec
has_unitsop some m/zc
has_unitsop some u o 0000169c
has value typeop some xsd floatc

average massc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000208

This child of the former purgatory term ion attribute was made obsolete.
has super-classes
has_unitsop some u o 0000002c
has value typeop some xsd floatc

average product ion intensityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002225

has super-classes
product ion intensityc
has_unitsop some number of detector countsc
has_unitsop some percent of base peakc
has_unitsop some counts per secondc
has_unitsop some percent of base peak times 100c

axial ejection linear ion trapc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000078

has super-classes
linear ion trapc

AXIMA Assurance Linear MALDI-TOFc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000612

has super-classes
Shimadzu MALDI-TOF instrument modelc

AXIMA CFR MALDI-TOFc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000607

has super-classes
Shimadzu MALDI-TOF instrument modelc

AXIMA Confidence MALDI-TOFc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000611

has super-classes
Shimadzu MALDI-TOF instrument modelc

AXIMA Performance MALDI-TOF/TOFc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000610

has super-classes
Shimadzu MALDI-TOF instrument modelc

AXIMA-CFR plusc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000609

has super-classes
Shimadzu MALDI-TOF instrument modelc

AXIMA-QITc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000608

has super-classes
Shimadzu MALDI-TOF instrument modelc

base peakc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000210

has super-classes
peakc

base peak intensityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000505

has super-classes
spectrum propertyc
has_unitsop some number of detector countsc
has_unitsop some percent of base peakc
has_unitsop some counts per secondc
has_unitsop some percent of base peak times 100c
has_unitsop some u o 0000269c
has value typeop some xsd floatc

base peak m/zc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000504

has super-classes
spectrum propertyc
has_unitsop some m/zc
has value typeop some xsd floatc

baselinec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000085

has super-classes
resolution measurement methodc

baseline arrayc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002530

has super-classes
binary data arrayc

baseline reductionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000593

has super-classes
data processing actionc
has sub-classes
convex hull baseline reductionc, median baseline reductionc, top hat baseline reductionc

BaselineFilterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000753

has super-classes
TOPP softwarec

basepeak chromatogramc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000628

has super-classes
ion current chromatogramc

beam-type collision-induced dissociationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000422

has super-classes
collision-induced dissociationc
has sub-classes
higher energy beam-type collision-induced dissociationc, supplemental beam-type collision-induced dissociationc

below precursor intensity dominance charge state calculationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000779

has super-classes
charge state calculationc

best replicate spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003068

has super-classes
spectrum aggregation typec

beta-cleavagec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000411

This child of the former purgatory term ion reaction was made obsolete.

binary data arrayc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000513

has super-classes
part_ofop some spectrumc
part_ofop some chromatogramc
has sub-classes
baseline arrayc, charge arrayc, flow rate arrayc, intensity arrayc, ion mobility arrayc, m/z arrayc, mass arrayc, mean charge arrayc, noise arrayc, non-standard data arrayc, pressure arrayc, resolution arrayc, sampled noise baseline arrayc, sampled noise intensity arrayc, sampled noise m/z arrayc, scanning quadrupole position lower bound m/z arrayc, scanning quadrupole position upper bound m/z arrayc, signal to noise arrayc, temperature arrayc, time arrayc, wavelength arrayc

binary data compression parameterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003091

has super-classes
part_ofop some spectrumc
part_ofop some chromatogramc
has sub-classes
number of mantissa bits truncatedc

binary data compression typec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000572

has super-classes
part_ofop some spectrumc
part_ofop some chromatogramc
has sub-classes
MS-Numpress linear prediction compressionc, MS-Numpress linear prediction compression followed by zlib compressionc, MS-Numpress positive integer compressionc, MS-Numpress positive integer compression followed by zlib compressionc, MS-Numpress short logged float compressionc, MS-Numpress short logged float compression followed by zlib compressionc, no compressionc, truncation and zlib compressionc, truncation, delta prediction and zlib compressionc, truncation, linear prediction and zlib compressionc, zlib compressionc

binary data typec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000518

has super-classes
part_ofop some spectrumc
part_ofop some chromatogramc
has sub-classes
16-bit floatc, 32-bit floatc, 32-bit integerc, 64-bit floatc, 64-bit integerc, null-terminated ASCII stringc

BioAnalystc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000667

has super-classes
SCIEX softwarec
analysis softwarec
data processing softwarec

biological replicatec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001809

has super-classes
study variable attributec

BioTOFc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001537

has super-classes
Bruker Daltonics BioTOF seriesc

BioTOF IIc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000151

has super-classes
Bruker Daltonics BioTOF seriesc

BioTOF IIIc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001538

has super-classes
Bruker Daltonics BioTOF seriesc

BioTOF-Qc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000152

has super-classes
Bruker Daltonics BioTOF seriesc

BioToolsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000707

has super-classes
Bruker softwarec
analysis softwarec
data processing softwarec

Bioworksc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000533

has super-classes
Thermo Finnigan softwarec
analysis softwarec
data processing softwarec

Bioworks SRF formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000742

has super-classes
mass spectrometer file formatc
intermediate analysis formatc

blackbody infrared radiative dissociationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000242

has super-classes
dissociation methodc

Bruker BAF formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000815

has super-classes
mass spectrometer file formatc

Bruker BAF nativeID formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000772

has super-classes
native spectrum identifier formatc

Bruker BAF nativeID format, combined spectrac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002651

has super-classes
native spectrum identifier format, combined spectrac
has value typeop some xsd stringc

Bruker Container formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002302

has super-classes
mass spectrometer file formatc

Bruker Container nativeID formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002303

has super-classes
native spectrum identifier formatc
has value typeop some xsd stringc

Bruker Daltonics amaZon seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001545

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
amaZon ETDc, amaZon Speedc, amaZon Speed ETDc, amaZon Xc

Bruker Daltonics apex seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001556

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
apex IVc, apex Qc, apex ultrac

Bruker Daltonics BioTOF seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001535

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
BioTOFc, BioTOF IIc, BioTOF IIIc, BioTOF-Qc, UltroTOF-Qc

Bruker Daltonics esquire seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001533

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
esquire 4000c, esquire 6000c

Bruker Daltonics EVOQ seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002294

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
EVOQ Elitec, EVOQ Qubec

Bruker Daltonics flex seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001534

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
OmniFlexc, autoflexc, autoflex IIc, autoflex II TOF/TOFc, autoflex III TOF/TOF smartbeamc, autoflex III smartbeamc, autoflex TOF/TOFc, microflexc, microflex IIc, microflex LRFc, microflex LTc, rapifleXc, ultrafleXtremec, ultraflexc, ultraflex III TOF/TOFc, ultraflex TOF/TOFc

Bruker Daltonics HCT Seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000697

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
HCTc, HCTplusc, HCTultrac, HCTultra ETD IIc, HCTultra PTMc

Bruker Daltonics instrument modelc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000122

has super-classes
instrument modelc
has sub-classes
Bruker Daltonics BioTOF seriesc, Bruker Daltonics EVOQ seriesc, Bruker Daltonics HCT Seriesc, Bruker Daltonics SCION seriesc, Bruker Daltonics amaZon seriesc, Bruker Daltonics apex seriesc, Bruker Daltonics esquire seriesc, Bruker Daltonics flex seriesc, Bruker Daltonics maXis seriesc, Bruker Daltonics micrOTOF seriesc, Bruker Daltonics solarix seriesc, Bruker Daltonics timsTOF seriesc

Bruker Daltonics maXis seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001547

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
maXisc, maXis 4Gc, maXis IIc

Bruker Daltonics micrOTOF seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001536

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
compactc, impactc, impact HDc, impact IIc, micrOTOFc, micrOTOF IIc, micrOTOF-Qc, micrOTOF-Q IIc, micrOTOF-Q IIIc, microTOF LCc

Bruker Daltonics SCION seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002293

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
SCION SQc, SCION TQc

Bruker Daltonics solarix seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001548

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
solariXc

Bruker Daltonics timsTOF seriesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003123

has super-classes
Bruker Daltonics instrument modelc
has sub-classes
timsTOFc, timsTOF Proc, timsTOF Pro 2c, timsTOF SCPc, timsTOF fleXc

Bruker FID formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000825

has super-classes
mass spectrometer file formatc

Bruker FID nativeID formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000773

The nativeID must be the same as the source file ID.
has super-classes
native spectrum identifier formatc

Bruker FID nativeID format, combined spectrac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002652

The nativeID must be the same as the source file ID.
has super-classes
native spectrum identifier format, combined spectrac
has value typeop some xsd stringc

Bruker softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000692

has super-classes
softwarec
has sub-classes
BioToolsc, CLINPROTc, CLINPROT microc, CLINPROT robotc, ClinProToolsc, Compassc, Compass OpenAccessc, Compass Security Packc, Compass for HCT/esquirec, Compass for micrOTOFc, CompassXportc, CompassXtractc, DataAnalysisc, FlexAnalysisc, FlexControlc, GENOLINKc, GenoToolsc, HCTcontrolc, HyStarc, PROTEINEERc, PROTEINEER dpc, PROTEINEER fcc, PROTEINEER spIIc, PROTEINEER-LCc, PolyToolsc, ProfileAnalysisc, ProteinExtractorc, ProteinScapec, PureDiskc, QuantAnalysisc, TargetAnalysisc, WARP-LCc, apexControlc, dpControlc, esquireControlc, flexImagingc, micrOTOFcontrolc, spControlc

Bruker TDF formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002817

has super-classes
mass spectrometer file formatc

Bruker TDF nativeID formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002818

has super-classes
native spectrum identifier formatc

Bruker TDF nativeID format, combined spectrac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002819

has super-classes
native spectrum identifier format, combined spectrac
has value typeop some xsd stringc

Bruker U2 formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000816

has super-classes
mass spectrometer file formatc

Bruker U2 nativeID formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000823

has super-classes
native spectrum identifier formatc

Bruker XML formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001247

has super-classes
mass spectrometer file formatc

Bruker/Agilent YEP formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000567

has super-classes
mass spectrometer file formatc

Bruker/Agilent YEP nativeID formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000771

has super-classes
native spectrum identifier formatc

Bruker/Agilent YEP nativeID format, combined spectrac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002650

has super-classes
native spectrum identifier format, combined spectrac
has value typeop some xsd stringc

BSI softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001949

has super-classes
softwarec

buffer gasc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000412

has super-classes
precursor activation attributec
has value typeop some xsd stringc

Byonicc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002261

has super-classes
analysis softwarec

Byonic: Peptide AbsLogProbc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002309

has super-classes
PSM-level search engine specific statisticc
has_orderop some higher score betterc
has value typeop some xsd doublec

Byonic: Peptide AbsLogProb2Dc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002311

has super-classes
PSM-level search engine specific statisticc
has_orderop some higher score betterc
has value typeop some xsd doublec

Byonic: Protein AbsLogProbc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002310

has super-classes
search engine specific score for proteinsc
has_orderop some higher score betterc
has value typeop some xsd doublec

Byonic:Best LogProbc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002268

has super-classes
single protein identification statisticc
search engine specific scorec
has_orderop some lower score betterc
has value typeop some xsd doublec

Byonic:Best Scorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002269

has super-classes
search engine specific score for proteinsc
has_orderop some higher score betterc
has value typeop some xsd doublec

Byonic:Delta Scorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002263

has super-classes
PSM-level search engine specific statisticc
has_orderop some higher score betterc
has value typeop some xsd doublec

Byonic:DeltaMod Scorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002264

has super-classes
PSM-level search engine specific statisticc
has_orderop some higher score betterc
has value typeop some xsd doublec

Byonic:PEPc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002265

has super-classes
PSM-level search engine specific statisticc
has_orderop some lower score betterc
has value typeop some xsd doublec

Byonic:Peptide LogProbc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002266

has super-classes
PSM-level search engine specific statisticc
has_orderop some lower score betterc
has value typeop some xsd doublec

Byonic:Protein LogProbc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002267

has super-classes
search engine specific score for proteinsc
has_orderop some lower score betterc
has value typeop some xsd doublec

Byonic:Scorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002262

has super-classes
PSM-level search engine specific statisticc
has_orderop some higher score betterc
has value typeop some xsd doublec

c-terminal flanking residuec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001113

has super-classes
peptide sequence-level identification attributec
peptide-to-protein mapping attributec
has value typeop some xsd stringc

Calculate Probability Scoresc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002090

has super-classes
common search engine input parameterc
has value typeop some xsd booleanc

calibration spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000928

has super-classes
spectrum typec

CAMERAc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002871

has super-classes
analysis softwarec
data processing softwarec

cationized moleculec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000357

This child of the former purgatory term ion chemical type was made obsolete.

CCc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0001016

has super-classes
PEFF file sequence entry termc
has value typeop some xsd stringc

centroid spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000127

has super-classes
spectrum representationc

change logc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003199

has super-classes
spectral library attributec
has value typeop some xsd stringc

channeltronc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000107

has super-classes
detector typec

charge arrayc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000516

has super-classes
binary data arrayc

charge deconvolutionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000034

has super-classes
data processing actionc

charge exchange ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000385

has super-classes
ionization typec

charge inversion mass spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000322

has super-classes
mass spectrumc

charge inversion reactionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000414

This child of the former purgatory term ion reaction was made obsolete.

charge permutation reactionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000415

This child of the former purgatory term ion reaction was made obsolete.

charge statec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000041

has super-classes
ion selection attributec
ion propertyc
has value typeop some xsd intc

charge state calculationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000778

has super-classes
data processing actionc
has sub-classes
below precursor intensity dominance charge state calculationc

charge strippingc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000245

has super-classes
precursor activation attributec

charge stripping reactionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000416

This child of the former purgatory term ion reaction was made obsolete.

charge transfer reactionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000417

This child of the former purgatory term ion reaction was made obsolete.

charge-induced fragmentationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000413

This child of the former purgatory term ion reaction was made obsolete.

charge-remote fragmentationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000243

This child of the former purgatory term ion reaction was made obsolete.

chemi-ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000386

has super-classes
ionization typec

chemical formulac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000864

has super-classes
molecular entity attributec
has sub-classes
SMILES formulac, empirical formulac, molecular formulac, structural formulac

chemical ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000071

has super-classes
ionization typec

chrom formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002966

has super-classes
mass spectrometer file formatc

ChromaTOF HRT softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001877

has super-classes
acquisition softwarec
analysis softwarec
data processing softwarec
LECO softwarec

ChromaTOF softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001799

has super-classes
acquisition softwarec
analysis softwarec
data processing softwarec
LECO softwarec

chromatogramc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000625

has super-classes
part_ofop some spectrum generation informationc

chromatogram attributec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000808

has super-classes
object attributec
part_ofop some chromatogramc
has sub-classes
chromatogram titlec, highest observed m/zc, highest observed wavelengthc, lowest observed m/zc, lowest observed wavelengthc, negative scanc, positive scanc

chromatogram metricc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_4000017

has super-classes
QC metricc
has sub-classes
XIC metricc

chromatogram titlec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000809

This is the preferred storage place for the spectrum title.
has super-classes
chromatogram attributec
has value typeop some xsd stringc

chromatogram typec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000626

has super-classes
part_ofop some chromatogramc
has sub-classes
electromagnetic radiation chromatogramc, flow rate chromatogramc, ion current chromatogramc, pressure chromatogramc

chromatograph file formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002442

has super-classes
file formatc
has sub-classes
Andi-CHROM formatc

chromatographyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000054

This former purgatory term was made obsolete.

chromatography durationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_4000053

has super-classes
single valuec
has_metric_categoryop some ID free metricc
has_metric_categoryop some single run based metricc
has_metric_categoryop some retention time metricc
has_unitsop some u o 0000010c
has_value_conceptop some Durationc
has value typeop some xsd floatc

chromatography separationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002270

has super-classes
run attributec
has sub-classes
gas chromatography separationc, liquid chromatography separationc

chromosome namec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002637

has super-classes
proteogenomics attributec
has value typeop some xsd stringc

chromosome strandc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002638

has super-classes
proteogenomics attributec
has value typeop some xsd stringc

Chymotrypsinc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001306

has super-classes
cleavage agent namec
has regexpop some (?<=[FYWL])(?!P)c

Citius HRTc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001802

has super-classes
LECO instrument modelc

cleavage agent detailsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001044

has super-classes
search input detailsc
has sub-classes
cleavage agent namec

cleavage agent namec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001045

has super-classes
cleavage agent detailsc
has sub-classes
2-iodobenzoatec, Arg-Cc, Asp-Nc, Asp-N_ambicc, CNBrc, Chymotrypsinc, Formic_acidc, Lys-Cc, Lys-C/Pc, Lys-Nc, LysargiNasec, NoEnzymec, PepsinAc, TrypChymoc, Trypsinc, Trypsin/Pc, V8-DEc, V8-Ec, glutamyl endopeptidasec, leukocyte elastasec, no cleavagec, proline endopeptidasec, unspecific cleavagec

Cleavage agent regular expressionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001180

has super-classes
regular expressionc
part_ofop some cleavage agent detailsc
has sub-classes
((?<=D))|((?=D))c, (?<=K)c, (?<=K)(?!P)c, (?<=M)c, (?<=R)(?!P)c, (?<=W)c, (?<=[ALIV])(?c, (?<=[BDEZ])(?!P)c, (?<=[EZ])(?!P)c, (?<=[FL])c, (?<=[FYWLKR])(?!P)c, (?<=[FYWL])(?!P)c, (?<=[HKR]P)(?c, (?<=[KR])c, (?<=[KR])(?!P)c, (?<=[^E]E)c, (?=[BD])c, (?=[DE])c, (?=[KR])c

CLINPROTc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000708

has super-classes
Bruker softwarec
analysis softwarec
data processing softwarec

CLINPROT microc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000709

has super-classes
Bruker softwarec
analysis softwarec
data processing softwarec

CLINPROT robotc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000710

has super-classes
Bruker softwarec

ClinProToolsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000711

has super-classes
Bruker softwarec

Cliquidc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000672

has super-classes
SCIEX softwarec

clustal alnc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001351

has super-classes
database file formatsc

cluster identifierc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002407

has super-classes
protein cluster identification attributec
has value typeop some xsd intc

cluster ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000358

This child of the former purgatory term ion chemical type was made obsolete.

CNBrc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001307

has super-classes
cleavage agent namec
has regexpop some (?<=M)c

co-authorc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002036

has super-classes
contact rolec

co-eluting ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001241

has super-classes
product ion attributec

coated glass platec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001940

has super-classes
sample plate typec

coefficient of variationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001883

has super-classes
transition validation attributec
has value typeop some xsd floatc

Collision cell exit potentialc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001944

has super-classes
precursor activation attributec
has_unitsop some u o 0000218c
has value typeop some xsd floatc

collision energyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000045

has super-classes
precursor activation attributec
has_unitsop some u o 0000266c
has value typeop some xsd floatc
has sub-classes
collision energy ramp endc, collision energy ramp startc

collision energy ramp endc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002014

has super-classes
collision energyc
has_unitsop some u o 0000266c
has value typeop some xsd floatc

collision energy ramp startc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002013

has super-classes
collision energyc
has_unitsop some u o 0000266c
has value typeop some xsd floatc

collision gasc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000419

has super-classes
precursor activation attributec
has value typeop some xsd stringc

collision gas pressurec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000869

has super-classes
precursor activation attributec
has_unitsop some u o 0000110c
has value typeop some xsd floatc

collision quadrupolec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000275

has super-classes
ion optics typec

collision-induced dissociationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000133

has super-classes
dissociation methodc
has sub-classes
beam-type collision-induced dissociationc, supplemental collision-induced dissociationc, trap-type collision-induced dissociationc

collisional cross sectional areac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002954

has super-classes
molecular entity propertyc
has_unitsop some u o 0000324c
has value typeop some xsd doublec

collisional excitationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000418

This child of the former purgatory term ion reaction was made obsolete.

combined dissociation methodc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003181

has super-classes
dissociation methodc
has sub-classes
electron-transfer/collision-induced dissociationc, electron-transfer/higher-energy collision dissociationc

combined FDRScorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002125

This term was made obsolete because it was split into the more specific terms for PSM-level combined FDRScore (MS:1002356), distinct peptide-level combined FDRScore (MS:1002361), protein-level combined FDRScore (MS:1002366) and protein group-level combined FDRScore (MS:1002375).
has super-classes
PSM-level search engine specific statisticc
search engine specific scorec
has value typeop some xsd doublec

combined FDRScore for proteinsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002366

has super-classes
search engine specific score for proteinsc
has_domainop some value greater than zero but less than or equal to onec
has value typeop some xsd doublec

combined ms-ms + spectral library searchc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002755

has super-classes
search typec

combined pmf + ms-ms searchc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001584

has super-classes
search typec

Cometc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002251

has super-classes
analysis softwarec

Comet:deltacnc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002253

has super-classes
PSM-level search engine specific statisticc
has value typeop some xsd doublec

Comet:deltacnstarc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002254

has super-classes
PSM-level search engine specific statisticc
has value typeop some xsd doublec

Comet:expectation valuec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002257

has super-classes
search engine specific scorec
has value typeop some xsd doublec

Comet:matched ionsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002258

has super-classes
PSM-level search engine specific statisticc
has value typeop some xsd intc

Comet:sprankc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002256

has super-classes
PSM-level search engine specific statisticc
has value typeop some xsd doublec

Comet:spscorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002255

has super-classes
PSM-level search engine specific statisticc
has value typeop some xsd doublec

Comet:total ionsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002259

has super-classes
PSM-level search engine specific statisticc
has value typeop some xsd intc

Comet:xcorrc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002252

has super-classes
PSM-level search engine specific statisticc
has_orderop some higher score betterc
has value typeop some xsd doublec

command-line parametersc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001885

has super-classes
data processing parameterc
library provenance attributec
has value typeop some xsd stringc

Commentc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0001033

has super-classes
PEFF file sequence entry termc
has value typeop some xsd stringc

common search engine input parameterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002094

has super-classes
search engine input parameterc
has sub-classes
Calculate Probability Scoresc, No fixed modifications searchedc, No variable modifications searchedc, minimum number of enzymatic terminic

common software input parameterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002104

has super-classes
software input parameterc

compactc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002280

has super-classes
Bruker Daltonics micrOTOF seriesc

Compassc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000712

has super-classes
Bruker softwarec
analysis softwarec
data processing softwarec

Compass for HCT/esquirec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000713

has super-classes
Bruker softwarec
analysis softwarec
data processing softwarec

Compass for micrOTOFc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000714

has super-classes
Bruker softwarec
analysis softwarec
data processing softwarec

Compass OpenAccessc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000715

has super-classes
Bruker softwarec
analysis softwarec
data processing softwarec

Compass Security Packc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000716

has super-classes
Bruker softwarec

CompassXportc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000717

has super-classes
Bruker softwarec
data processing softwarec

CompassXtractc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000718

has super-classes
Bruker softwarec
data processing softwarec

completion timec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000747

has super-classes
data processing parameterc
has value typeop some xsd date timec

compound data typec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002709

has sub-classes
list of typec

Compound Discovererc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002880

has super-classes
small molecule analysis softwarec

compound identification confidence code in MS-DIALc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003032

has super-classes
small molecule identification attributec
has value typeop some xsd stringc

compound identification confidence levelc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002896

has super-classes
small molecule identification attributec
has value typeop some xsd stringc

cone voltagec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000876

has super-classes
source attributec
has_unitsop some u o 0000218c
has value typeop some xsd floatc

confidence scorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001193

has super-classes
peptide sequence-level identification statisticc
single protein identification statisticc
has value typeop some xsd doublec

confident distinct peptide sequencesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001098

has super-classes
protein-level identification attributec
has value typeop some xsd non negative integerc

confident peptide qualificationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001099

has super-classes
protein-level identification attributec
has value typeop some xsd non negative integerc

confident peptide sequence numberc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001100

has super-classes
protein-level identification attributec
has value typeop some xsd non negative integerc

Conflictc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0001023

has super-classes
PEFF file sequence entry termc
has regexpop some regular expression for a value in a key-value pair of a PEFF description line describing one sequence position followed by one PEFF term name and one optional commentc
has value typeop some xsd stringc

consecutive reaction monitoringc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000244

This former purgatory term was made obsolete.

consecutive reaction monitoringc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000327

This term was made obsolete because it was replaced by consecutive reaction monitoring (MS:1000244).

consecutive reaction monitoring chromatogramc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001474

This term was made obsolete because, by design, it can't be properly represented in mzML 1.1. CRM experiments must be represented in a spectrum-centric way.
has super-classes
ion current chromatogramc

consensus resultc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002315

has super-classes
spectrum identification result detailsc

consensus scoringc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002492

has super-classes
special processingc

consensus spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003067

has super-classes
spectrum aggregation typec

consensusXMLc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002825

has super-classes
OpenMS file formatc

constantc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000088

This child of the former purgatory term resolution type was made obsolete.

constant neutral gain scanc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000324

This former purgatory term was made obsolete.

constant neutral gain spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000325

has super-classes
mass spectrumc

constant neutral loss scanc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000323

This former purgatory term was made obsolete.

constant neutral loss spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000326

has super-classes
mass spectrumc

constant neutral mass lossc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000097

This former purgatory term was made obsolete.

constituent identification filec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003204

has super-classes
library provenance attributec
has value typeop some xsd stringc

constituent library filec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003205

has super-classes
library provenance attributec
has value typeop some xsd stringc

constituent spectrum filec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003203

has super-classes
library provenance attributec
has value typeop some xsd stringc

contact addressc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000587

has super-classes
contact attributec
has value typeop some xsd stringc

contact affiliationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000590

has super-classes
contact attributec
has value typeop some xsd stringc

contact attributec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000585

has super-classes
object attributec
part_ofop some Proteomics Standards Initiative Mass Spectrometry Vocabulariesc
has sub-classes
contact URLc, contact addressc, contact affiliationc, contact emailc, contact fax numberc, contact namec, contact phone numberc, contact rolec, contact toll-free phone numberc, role typec

contact emailc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000589

has super-classes
contact attributec
has value typeop some xsd stringc

contact fax numberc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001756

has super-classes
contact attributec
has value typeop some xsd stringc

contact namec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000586

has super-classes
contact attributec
has value typeop some xsd stringc

contact phone numberc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001755

has super-classes
contact attributec
has value typeop some xsd stringc

contact rolec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002033

has super-classes
contact attributec
has sub-classes
co-authorc, dataset submitterc, first authorc, lab headc, senior authorc

contact toll-free phone numberc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001757

has super-classes
contact attributec
has value typeop some xsd stringc

contact URLc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000588

has super-classes
contact attributec
has value typeop some xsd stringc

continuous flow fast atom bombardmentc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000055

has super-classes
inlet typec

Conventional ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000359

This child of the former purgatory term ion chemical type was made obsolete.

Conversionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0000016

has super-classes
PEFF file header section termc
has value typeop some xsd stringc

conversion dynodec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000346

has super-classes
detector typec
has sub-classes
conversion dynode electron multiplierc, conversion dynode photomultiplierc

conversion dynode electron multiplierc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000108

has super-classes
conversion dynodec

conversion dynode photomultiplierc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000109

has super-classes
conversion dynodec

conversion softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002333

has super-classes
data processing softwarec
has sub-classes
PRIDE Converter2c, ProConc, python-psimsc

Conversion to dtac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000741

has super-classes
file format conversionc

Conversion to mzDatac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000546

has super-classes
file format conversionc

Conversion to mzMLc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000544

has super-classes
file format conversionc

Conversion to mzMLbc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002839

has super-classes
file format conversionc

Conversion to mzXMLc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000545

has super-classes
file format conversionc

convex hull baseline reductionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001995

has super-classes
baseline reductionc

copyright noticec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003198

has super-classes
spectral library attributec
has value typeop some xsd stringc

count of identified clustersc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002406

has super-classes
protein group-level result list attributec
has value typeop some xsd intc

count of identified proteinsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002404

has super-classes
protein-level result list attributec
has value typeop some xsd intc

counts per secondc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000814

has super-classes
intensity unitc

counts reportingc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002122

has super-classes
feature list attributec

Coverc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCIT_C68811

has super-classes
n c i t c25404c

CPTAC accession numberc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003031

has super-classes
external reference identifierc
has value typeop some xsd stringc

Crc64c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0001024

has super-classes
PEFF file sequence entry termc
has value typeop some xsd stringc

CRM spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000581

has super-classes
mass spectrumc

cross-link acceptorc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002510

has super-classes
cross-linking attributec
has value typeop some xsd stringc

cross-link donorc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002509

has super-classes
cross-linking attributec
has value typeop some xsd stringc

cross-link spectrum identification itemc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002511

has super-classes
cross-linking attributec
has value typeop some xsd intc

cross-linked peptide ion interpretation formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003105

has super-classes
ion interpretation formatc

cross-linking attributec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002508

has super-classes
single identification result attributec
has sub-classes
cross-link acceptorc, cross-link donorc, cross-link spectrum identification itemc

cross-linking result detailsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002675

has super-classes
part_ofop some spectrum interpretationc
has sub-classes
interaction score derived from cross-linkingc

cross-linking scorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002512

has super-classes
search engine specific score for proteinsc
has value typeop some xsd doublec

cross-linking searchc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002494

has super-classes
special processingc

crushed crystal MALDI sample preparationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001988

has super-classes
matrix application typec

curator keywordc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001926

has super-classes
external reference keywordc
has value typeop some xsd stringc

custom unreleased software toolc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000799

has super-classes
softwarec
has value typeop some xsd stringc

customizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000032

has super-classes
instrument attributec
has value typeop some xsd stringc

cyclotronc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000288

has super-classes
mass analyzer typec

cyclotron motionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000305

This child of the former purgatory term m/z Separation Method was made obsolete.

D-Scorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002536

has super-classes
PTM localization PSM-level statisticc
has regexpop some regular expression for modification localization scoringc
has value typeop some xsd stringc

D-Score thresholdc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002557

has super-classes
PTM localization score thresholdc
has value typeop some xsd doublec

daltonc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000212

This term was made obsolete because it was redundant with the Unit Ontology term dalton (UO:0000221).

daly detectorc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000110

has super-classes
detector typec

Data derived from previous datasetc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002863

has super-classes
Experiment additional parameterc

Data Explorerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000536

has super-classes
Applied Biosystems softwarec
acquisition softwarec
analysis softwarec
data processing softwarec

data file checksum typec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000561

has super-classes
part_ofop some source data filec
has sub-classes
MD5c, SHA-1c, SHA-256c

data file contentc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000524

has super-classes
part_ofop some source data filec
has sub-classes
PDA spectrumc, absorption spectrumc, electromagnetic radiation chromatogramc, electromagnetic radiation spectrumc, emission spectrumc, ion current chromatogramc, mass spectrometry acquisition methodc, mass spectrumc

data filteringc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001486

has super-classes
data processing actionc
has sub-classes
high intensity data point removalc, low intensity data point removalc

data independent acquisition from dissociation of full mass rangec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003227

has super-classes
mass spectrometry acquisition methodc
data-independent acquisitionc
dissociation of full mass rangec
ion mobility separationc

data independent acquisition from dissociation of full mass range after ion mobility separationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003226

has super-classes
mass spectrometry acquisition methodc
data-independent acquisitionc
ion mobility separationc

data independent acquisition from dissociation of scanning quadrupole across mass rangec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003228

has super-classes
mass spectrometry acquisition methodc
data-independent acquisitionc
dissociation of scanning quadrupole across a specified mass rangec

data independent acquisition from dissociation of sequential mass rangesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003224

has super-classes
mass spectrometry acquisition methodc
data-independent acquisitionc
dissociation of sequential mass rangesc

data independent acquisition from dissociation of sequential mass ranges after ion mobility separationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003225

has super-classes
mass spectrometry acquisition methodc
data-independent acquisitionc
dissociation of sequential mass rangesc
ion mobility separationc

data processing actionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000543

has super-classes
data transformationc
has sub-classes
adduct deconvolutionc, baseline reductionc, charge deconvolutionc, charge state calculationc, data filteringc, deisotopingc, intensity normalizationc, ion mobility deconvolutionc, m/z calibrationc, peak intensity transformc, peak pickingc, precursor recalculationc, retention time alignmentc, smoothingc

data processing parameterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000630

has super-classes
part_ofop some spectrum generation informationc
has sub-classes
command-line parametersc, completion timec, data processing start timec, high intensity thresholdc, inclusive high intensity thresholdc, inclusive low intensity thresholdc, low intensity thresholdc

data processing softwarec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001457

has super-classes
softwarec
has sub-classes
4000 Series Explorer Softwarec, 4700 Explorerc, 6300 Series Ion Trap Data Analysis Softwarec, ALEXc, ALEX123c, Analystc, BioAnalystc, BioToolsc, Bioworksc, CAMERAc, CLINPROTc, CLINPROT microc, ChromaTOF HRT softwarec, ChromaTOF softwarec, Compassc, Compass OpenAccessc, Compass for HCT/esquirec, Compass for micrOTOFc, CompassXportc, CompassXtractc, Data Explorerc, DataAnalysisc, Empowerc, FlexAnalysisc, GPS Explorerc, Genespring MSc, Greazyc, LIMSAc, LIQUIDc, LOBSTAHSc, LPPtigerc, LightSight Softwarec, LipiDexc, Lipid Data Analyzerc, Lipid-Proc, LipidBlastc, LipidFinderc, LipidHunterc, LipidMatchc, LipidQAc, LipidXplorerc, MALDI Solutionsc, MALDI Solutions LC-MALDIc, METLINc, MRMPilot Softwarec, MS-DIALc, MSDKc, MSnbasec, MZminec, Maltcmsc, MarkerView Softwarec, MassHunter BioConfirmc, MassHunter Mass Profilerc, MassHunter Metabolite IDc, MassHunter Qualitative Analysisc, MassHunter Quantitative Analysisc, MassLynxc, Mauic, MultiQuantc, MzStarc, MzWiffc, PEAKS Nodec, PEAKS Onlinec, PEAKS Studioc, PepFinderc, PinPointc, Pro BLASTc, Pro ICATc, Pro IDc, Pro Quantc, ProfileAnalysisc, ProteinLynx Global Serverc, ProteinPilot Softwarec, Proteiosc, ProteoWizard softwarec, Proteome Discovererc, QuantAnalysisc, ReAdWc, SCIEX TOF/TOF Series Explorer Softwarec, SCiLS Labc, SQIDc, Spectrum Mill for MassHunter Workstationc, TOPP softwarec, ThermoRawFileParserc, TissueView Softwarec, Trapperc, UNIFYc, Voyager Biospectrometry Workstation Systemc, XCMSc, Xcaliburc, conversion softwarec, flexImagingc, massWolfc, ms_deisotopec, mzRc, postprocessing softwarec, preprocessing softwarec, pymzMLc

data processing start timec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002435

has super-classes
data processing parameterc
has value typeop some xsd date timec

data stored in databasec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001107

has super-classes
intermediate analysis formatc

data transformationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000452

has super-classes
part_ofop some spectrum generation informationc
has sub-classes
data processing actionc, file format conversionc

data-dependent acquisitionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003221

has super-classes
mass spectrometry acquisition method aspectc

data-independent acquisitionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003215

has super-classes
mass spectrometry acquisition method aspectc
has sub-classes
data independent acquisition from dissociation of full mass rangec, data independent acquisition from dissociation of full mass range after ion mobility separationc, data independent acquisition from dissociation of scanning quadrupole across mass rangec, data independent acquisition from dissociation of sequential mass rangesc, data independent acquisition from dissociation of sequential mass ranges after ion mobility separationc, selected ion monitoringc, selected reaction monitoringc

DataAnalysisc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000719

has super-classes
Bruker softwarec
analysis softwarec
data processing softwarec

database ESTc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001178

has super-classes
database type nucleotidec

database file formatsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001347

has super-classes
search database detailsc
has sub-classes
ASN.1c, FASTA formatc, NBRF PIRc, NCBI *.p*c, NIST MSP formatc, PEFF formatc, UniProtKB XML sequence formatc, UniProtKB text sequence formatc, clustal alnc, embl emc

database filteringc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001019

has super-classes
search database detailsc
has sub-classes
Sequence database filter typesc, Sequence database filtersc

database IPI_arabidopsisc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001290

has super-classes
database namec

database IPI_chickenc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001288

has super-classes
database namec

database IPI_cowc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001289

has super-classes
database namec

database IPI_humanc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001142

has super-classes
database namec

database IPI_mousec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001285

has super-classes
database namec

database IPI_ratc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001286

has super-classes
database namec

database IPI_zebrafishc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001287

has super-classes
database namec

database local file pathc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001014

has super-classes
search database detailsc

database namec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001013

has super-classes
search database detailsc
has sub-classes
database IPI_arabidopsisc, database IPI_chickenc, database IPI_cowc, database IPI_humanc, database IPI_mousec, database IPI_ratc, database IPI_zebrafishc, database UniProtKBc, database nrc

database nrc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001084

has super-classes
database namec

database original uric back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001015

has super-classes
search database detailsc
has value typeop some xsd any u r ic

database sequence detailsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001342

has super-classes
search database detailsc
has sub-classes
AA sequencec, NA sequencec, molecule taxonomyc, protein descriptionc

database sourcec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001012

has super-classes
search database detailsc
has value typeop some xsd stringc
has sub-classes
DB source EBIc, DB source NCBIc, DB source UniProtc

database typec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001018

has super-classes
search database detailsc
has sub-classes
database type amino acidc, database type nucleotidec

database type amino acidc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001073

has super-classes
database typec
has sub-classes
database type spectral libraryc

database type nucleotidec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001079

has super-classes
database typec
has sub-classes
database ESTc

database type spectral libraryc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002752

has super-classes
database type amino acidc

database UniProtKBc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002126

has super-classes
database namec
has sub-classes
database UniProtKB/Swiss-Protc, database UniProtKB/TrEMBLc

database UniProtKB/Swiss-Protc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001104

has super-classes
database UniProtKBc

database UniProtKB/TrEMBLc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002060

has super-classes
database UniProtKBc

database versionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001016

has super-classes
search database detailsc
has value typeop some xsd stringc

DatabaseDescriptionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0000020

has super-classes
PEFF file header section termc
has value typeop some xsd stringc

Dataset FTP locationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002852

has super-classes
Experiment additional parameterc
has value typeop some xsd stringc

dataset submitterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002037

has super-classes
contact rolec

Dataset with its publication pendingc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002858

has super-classes
Experiment additional parameterc

Dataset with no associated published manuscriptc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002853

has super-classes
Experiment additional parameterc

date / time search performedc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001035

has super-classes
search statisticsc

DB accession filter stringc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001514

has super-classes
Sequence database filtersc
has value typeop some xsd stringc

DB composition only decoyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001453

has super-classes
decoy DB detailsc

DB composition target+decoyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001197

has super-classes
decoy DB detailsc

DB filter on accession numbersc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001021

has super-classes
Sequence database filter typesc

DB filter on sequence patternc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001027

has super-classes
Sequence database filter typesc

DB filter taxonomyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001020

has super-classes
Sequence database filter typesc

DB MW filterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001022

has super-classes
Sequence database filter typesc

DB MW filter maximumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001201

has super-classes
Sequence database filtersc
has_unitsop some u o 0000221c
has_unitsop some u o 0000222c
has value typeop some xsd doublec

DB MW filter minimumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001202

has super-classes
Sequence database filtersc
has_unitsop some u o 0000221c
has_unitsop some u o 0000222c
has value typeop some xsd doublec

DB PI filterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001023

has super-classes
Sequence database filter typesc

DB PI filter maximumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001203

has super-classes
Sequence database filtersc
has value typeop some xsd doublec

DB PI filter minimumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001204

has super-classes
Sequence database filtersc
has value typeop some xsd doublec

DB sequence filter patternc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001513

has super-classes
Sequence database filtersc
has value typeop some xsd stringc

DB source EBIc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001252

has super-classes
database sourcec

DB source NCBIc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001253

has super-classes
database sourcec

DB source UniProtc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001254

has super-classes
database sourcec

DbDatec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0000014

This term was obsoleted.
has super-classes
PEFF file header section termc

DbDescriptionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0000010

has super-classes
PEFF file header section termc
has value typeop some xsd stringc

DBExporterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000754

has super-classes
TOPP softwarec

DBImporterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000755

has super-classes
TOPP softwarec

DbNamec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0000008

has super-classes
PEFF file header section termc
has value typeop some xsd stringc

DbSourcec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0000012

has super-classes
PEFF file header section termc
has value typeop some xsd stringc

DbUniqueIdc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0001001

This term was made obsolete because decided in Heidelberg 2018-04 that this is redundant.
has super-classes
PEFF file sequence entry termc
has value typeop some xsd stringc

DbVersionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0000013

has super-classes
PEFF file header section termc
has value typeop some xsd stringc

de facto standardc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000899

has super-classes
standardc

de novo searchc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001010

has super-classes
search typec

DeBunkerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001973

has super-classes
analysis softwarec

DeBunker:scorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001974

has super-classes
PSM-level search engine specific statisticc
PTM localization PSM-level statisticc
has regexpop some regular expression for modification localization scoringc
has value typeop some xsd stringc

DeBunker:score thresholdc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002560

has super-classes
PTM localization score thresholdc
has value typeop some xsd doublec

declustering potentialc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000875

has super-classes
source attributec
has_unitsop some u o 0000218c
has value typeop some xsd floatc

deconvoluted inverse reduced ion mobility arrayc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003155

has super-classes
ion mobility arrayc
has_unitsop some volt-second per square centimeterc
has value typeop some xsd floatc

deconvoluted ion mobility arrayc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003154

has super-classes
ion mobility arrayc
has_unitsop some u o 0000010c
has_unitsop some u o 0000028c
has value typeop some xsd floatc

deconvoluted ion mobility drift time arrayc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003156

has super-classes
ion mobility arrayc
has_unitsop some u o 0000010c
has_unitsop some u o 0000028c
has value typeop some xsd floatc

Decoyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0000011

has super-classes
PEFF file header section termc
has value typeop some xsd booleanc

decoy DB accession regexpc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001283

has super-classes
decoy DB detailsc
has value typeop some xsd stringc

decoy DB derived fromc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001284

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.
has super-classes
decoy DB detailsc

decoy DB detailsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001450

has super-classes
search database detailsc
has sub-classes
DB composition only decoyc, DB composition target+decoyc, decoy DB accession regexpc, decoy DB derived fromc, decoy DB generation algorithmc, decoy DB type randomizedc, decoy DB type reversec, decoy DB type shufflec

decoy DB from ESTc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001295

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.

decoy DB from IPI_arabidopsisc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001294

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.

decoy DB from IPI_chickenc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001298

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.

decoy DB from IPI_cowc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001299

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.

decoy DB from IPI_humanc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001300

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.

decoy DB from IPI_mousec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001293

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.

decoy DB from IPI_ratc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001292

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.

decoy DB from IPI_zebrafishc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001296

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.

decoy DB from nrc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001291

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.

decoy DB from UniProtKB/Swiss-Protc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001297

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.

decoy DB from UniProtKB/TrEMBLc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002061

This term was made obsolete, because a combination of database name, DB composition , decoy DB type , decoy DB generation algorithm, decoy DB accession regexp and decoy DB details suffices.

decoy DB generation algorithmc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001451

has super-classes
decoy DB detailsc
has value typeop some xsd stringc

decoy DB type randomizedc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001196

has super-classes
decoy DB detailsc

decoy DB type reversec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001195

has super-classes
decoy DB detailsc

decoy DB type shufflec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001452

has super-classes
decoy DB detailsc

decoy peptidec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002217

has super-classes
peptide sequence-level identification attributec
has value typeop some xsd booleanc

decoy spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003192

has super-classes
spectrum origin typec
has sub-classes
precursor shift decoy spectrumc, shuffle-and-reposition decoy spectrumc, unnatural peptidoform decoy spectrumc, unrelated species decoy spectrumc

decoy SRM transitionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002008

has super-classes
SRM transition typec

decreasing m/z scanc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000092

has super-classes
scan directionc

deisotopingc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000033

has super-classes
data processing actionc

delayed extractionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000246

has super-classes
ion optics typec

delta Mc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001976

has super-classes
spectrum identification result detailsc
has_unitsop some u o 0000166c
has_unitsop some u o 0000187c
has_unitsop some u o 0000221c
has value typeop some xsd doublec

delta m/zc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001975

has super-classes
spectrum identification result detailsc
has_unitsop some u o 0000166c
has_unitsop some u o 0000187c
has_unitsop some u o 0000221c
has value typeop some xsd doublec

DELTA plusAdvantagec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000153

has super-classes
Thermo Finnigan instrument modelc

DELTAplusXPc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000154

has super-classes
Thermo Finnigan instrument modelc

demultiplexed spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003075

has super-classes
spectrum origin typec

denominator data type attributec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002152

has super-classes
quantification object attributec

Densityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCIT_C45781

has super-classes
n c i t c25447c

deoxyribonucleotidec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003038

has super-classes
small moleculec

desorption electrospray ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002011

has super-classes
atmospheric pressure ionizationc

desorption ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000247

has super-classes
ionization typec
has sub-classes
desorption/ionization on siliconc, field desorptionc, laser desorption ionizationc, matrix-assisted laser desorption ionizationc, surface-assisted laser desorption ionizationc

desorption/ionization on siliconc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000387

has super-classes
desorption ionizationc

detectorc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000453

has super-classes
part_ofop some instrumentc

detector acquisition modec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000027

has super-classes
part_ofop some detectorc
has sub-classes
analog-digital converterc, pulse countingc, time-digital converterc, transient recorderc

detector attributec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000481

has super-classes
part_ofop some detectorc
has sub-classes
detector potentialc, detector resolutionc, sampling frequencyc

detector potentialc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002273

has super-classes
detector attributec
has_unitsop some u o 0000218c
has value typeop some xsd floatc

detector resolutionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000028

has super-classes
detector attributec
has value typeop some xsd floatc

detector typec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000026

has super-classes
part_ofop some detectorc
has sub-classes
array detectorc, channeltronc, conversion dynodec, daly detectorc, dynodec, electron multiplierc, faraday cupc, fluorescence detectorc, focal plane collectorc, inductive detectorc, ion-to-photon detectorc, multi-collectorc, photomultiplierc, point collectorc, postacceleration detectorc

DFSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000640

has super-classes
Thermo Scientific instrument modelc

diagnostic ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000360

This child of the former purgatory term ion chemical type was made obsolete.

DiART quantitation analysisc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002761

has super-classes
isobaric label quantitation analysisc

DiART reagentc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002771

has super-classes
sample labelc
has sub-classes
DiART reagent 114c, DiART reagent 115c, DiART reagent 116c, DiART reagent 117c, DiART reagent 118c, DiART reagent 119c

DiART reagent 114c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002772

has super-classes
DiART reagentc

DiART reagent 115c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002773

has super-classes
DiART reagentc

DiART reagent 116c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002774

has super-classes
DiART reagentc

DiART reagent 117c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002775

has super-classes
DiART reagentc

DiART reagent 118c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002776

has super-classes
DiART reagentc

DiART reagent 119c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002777

has super-classes
DiART reagentc

Digital Object Identifier (DOI)c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001922

has super-classes
external reference identifierc
has regexpop some regular expression for a digital object identifier (DOI)c
has value typeop some xsd stringc

DiLeu quantitation analysisc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002762

has super-classes
isobaric label quantitation analysisc

DiLeu reagentc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002778

has super-classes
sample labelc
has sub-classes
DiLeu reagent 115c, DiLeu reagent 116c, DiLeu reagent 117c, DiLeu reagent 118c

DiLeu reagent 115c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002779

has super-classes
DiLeu reagentc

DiLeu reagent 116c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002780

has super-classes
DiLeu reagentc

DiLeu reagent 117c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002781

has super-classes
DiLeu reagentc

DiLeu reagent 118c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002782

has super-classes
DiLeu reagentc

dilution series, concentration Xc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001816

has super-classes
study variable attributec
has value typeop some xsd doublec

dimeric ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000361

This child of the former purgatory term ion chemical type was made obsolete.

Dionex instrument modelc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000491

has super-classes
instrument modelc

direct inletc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000056

has super-classes
inlet typec

direct insertion probec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000248

has super-classes
inlet typec

direct liquid introductionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000249

has super-classes
inlet typec

DirecTagc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001586

has super-classes
analysis softwarec

Discoverer MSF formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001564

has super-classes
intermediate analysis formatc

dissociation methodc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000044

has super-classes
part_ofop some precursor activationc
has sub-classes
LIFTc, blackbody infrared radiative dissociationc, collision-induced dissociationc, combined dissociation methodc, electron capture dissociationc, electron transfer dissociationc, in-source collision-induced dissociationc, low-energy collision-induced dissociationc, negative electron transfer dissociationc, photodissociationc, plasma desorptionc, post-source decayc, pulsed q dissociationc, surface-induced dissociationc, sustained off-resonance irradiationc

dissociation of full mass rangec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003216

has super-classes
mass spectrometry acquisition method aspectc
has sub-classes
data independent acquisition from dissociation of full mass rangec

dissociation of scanning quadrupole across a specified mass rangec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003217

has super-classes
mass spectrometry acquisition method aspectc
has sub-classes
data independent acquisition from dissociation of scanning quadrupole across mass rangec

dissociation of sequential mass rangesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003218

has super-classes
mass spectrometry acquisition method aspectc
has sub-classes
data independent acquisition from dissociation of sequential mass rangesc, data independent acquisition from dissociation of sequential mass ranges after ion mobility separationc

dissociative ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000388

has super-classes
ionization typec

distinct peptide sequencesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001097

has super-classes
protein-level identification attributec
has value typeop some xsd non negative integerc

distinct peptide-level combined FDRScorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002361

has super-classes
search engine specific peptide sequence-level identification statisticc
search engine specific score for proteinsc
has_domainop some value greater than zero but less than or equal to onec
has value typeop some xsd doublec

distinct peptide-level FDRScorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002360

has super-classes
search engine specific peptide sequence-level identification statisticc
search engine specific score for proteinsc
has_domainop some value greater than zero but less than or equal to onec
has value typeop some xsd doublec

distinct peptide-level q-valuec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001868

has super-classes
peptide-level statistical thresholdc
has_domainop some value between 0 and 1 inclusivec
has value typeop some xsd doublec

distonic ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000362

This child of the former purgatory term ion chemical type was made obsolete.

distributed normalized spectral abundance factorc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002548

has super-classes
quantification datatypec

DisulfideBondc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0001031

has super-classes
PEFF file sequence entry termc
has value typeop some xsd stringc

Domainc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0001025

has super-classes
PEFF file sequence entry termc
has value typeop some xsd stringc

domain rangec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002304

has super-classes
part_ofop some Proteomics Standards Initiative Mass Spectrometry Vocabulariesc
has sub-classes
value between 0 and 1 inclusivec, value between 0 and 1000 inclusivec, value greater than zeroc, value greater than zero but less than or equal to onec

double-focusing mass spectrometerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000289

This child of the former purgatory term mass spectrometer was made obsolete.

dpControlc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000720

has super-classes
Bruker softwarec
acquisition softwarec

dried droplet MALDI matrix preparationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000836

has super-classes
matrix application typec

DSQc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000634

has super-classes
Thermo Finnigan instrument modelc

DSQ IIc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000641

has super-classes
Thermo Scientific instrument modelc

DTA formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000613

has super-classes
mass spectrometer file formatc

DTASelectc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002598

has super-classes
analysis softwarec

DTASelect formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001464

has super-classes
intermediate analysis formatc

Durationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/NCIT_C25330

has super-classes
n c i t c21514c

dwell timec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000502

has super-classes
scan attributec
has_unitsop some u o 0000010c
has_unitsop some u o 0000031c
has value typeop some xsd floatc

dye-laserc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000852

has super-classes
laser typec

dynamic mass spectrometryc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000306

This child of the former purgatory term mass spectrometer was made obsolete.

dynodec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000347

has super-classes
detector typec

e/2 mass spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000328

has super-classes
mass spectrumc

eight sample runc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001822

has super-classes
raw file attributec

einzel lensc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000307

has super-classes
ion optics typec

electric field strengthc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000308

has super-classes
ion optics attributec
has_unitsop some u o 0000268c
has value typeop some xsd floatc

electromagnetic radiation chromatogramc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000811

has super-classes
data file contentc
chromatogram typec
has sub-classes
absorption chromatogramc, emission chromatogramc

electromagnetic radiation spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000804

has super-classes
data file contentc
spectrum typec

electron affinityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000213

This child of the former purgatory term ion attribute was made obsolete.
has super-classes
has value typeop some xsd floatc

electron capture dissociationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000250

has super-classes
dissociation methodc

electron energy obsoletec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000214

This former purgatory term was made obsolete.

electron ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000389

has super-classes
ionization typec

electron multiplierc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000253

has super-classes
detector typec
has sub-classes
electron multiplier tubec

electron multiplier tubec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000111

has super-classes
electron multiplierc

electron transfer dissociationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000598

has super-classes
dissociation methodc

electron voltc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000137

This term was made obsolete because it was redundant with the Unit Ontology term electron volt (UO:0000266).

electron-induced excitation in organicsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000252

This child of the former purgatory term ion reaction was made obsolete.

electron-transfer/collision-induced dissociationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003182

has super-classes
combined dissociation methodc

electron-transfer/higher-energy collision dissociationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002631

has super-classes
combined dissociation methodc

Electronic Ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000072

This term was made obsolete because it was replaced by electron ionization (MS:1000389).

electrospray inletc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000057

has super-classes
inlet typec
has sub-classes
nanospray inletc

electrospray ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000073

has super-classes
ionization typec
has sub-classes
microelectrosprayc, nanoelectrosprayc

electrospray supply typec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001941

has super-classes
part_ofop some sourcec
has sub-classes
fed supply electrosprayc, static supply electrosprayc

electrostatic energy analyzerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000254

has super-classes
mass analyzer typec

Element 2c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000646

has super-classes
Thermo Scientific instrument modelc

Element GDc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000647

has super-classes
Thermo Scientific instrument modelc

Element XRc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000645

has super-classes
Thermo Scientific instrument modelc

ELEMENT2c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000155

This former purgatory term was made obsolete.

elution timec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000826

has super-classes
scan attributec
has_unitsop some u o 0000010c
has_unitsop some u o 0000031c
has value typeop some xsd floatc

embl emc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001352

has super-classes
database file formatsc

emission chromatogramc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000813

has super-classes
electromagnetic radiation chromatogramc

emission spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000805

has super-classes
data file contentc
spectrum typec

emPAI valuec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001905

has super-classes
protein-level quantification datatypec
has value typeop some xsd doublec

empirical formulac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000865

has super-classes
chemical formulac
has value typeop some xsd stringc

Empowerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001795

has super-classes
Waters softwarec
analysis softwarec
data processing softwarec

emulsionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000047

has super-classes
sample statec

energy unitc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000046

This term was made obsolete because it was redundant with the Unit Ontology term energy unit (UO:0000111).
has super-classes
u o 0000000

enhanced multiply charged spectrumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000789

has super-classes
MS1 spectrumc

enhanced resolution scanc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000791

This term was made obsolete because it was merged with zoom scan (MS:1000497).

enium ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000363

This child of the former purgatory term ion chemical type was made obsolete.

environment metricc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_4000024

has super-classes
QC metricc

EPIFANYc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003118

has super-classes
TOPP softwarec
analysis softwarec

EPIFANY:Protein posterior probabilityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003119

has super-classes
search engine specific score for proteinsc
has value typeop some xsd doublec

error on absolute quantityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001138

has super-classes
quantification datatypec
has value typeop some xsd doublec

error on peptide areac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001131

has super-classes
peptide-level quantification datatypec
has value typeop some xsd doublec

error on peptide ratioc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001133

has super-classes
peptide-level quantification datatypec
has value typeop some xsd doublec

error on protein ratioc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001135

has super-classes
protein-level quantification datatypec
has value typeop some xsd doublec

esquire 4000c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000156

has super-classes
Bruker Daltonics esquire seriesc

esquire 6000c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000157

has super-classes
Bruker Daltonics esquire seriesc

esquireControlc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000721

has super-classes
Bruker softwarec
acquisition softwarec

EVc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0001008

has super-classes
PEFF file sequence entry termc
has value typeop some xsd stringc

even-electron ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000251

This child of the former purgatory term ion chemical type was made obsolete.

EVOQ Elitec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002297

has super-classes
Bruker Daltonics EVOQ seriesc

EVOQ Qubec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002298

has super-classes
Bruker Daltonics EVOQ seriesc

exact massc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000215

This child of the former purgatory term ion attribute was made obsolete.
has super-classes
has_unitsop some u o 0000002c
has value typeop some xsd floatc

Exactivec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000649

has super-classes
Thermo Scientific instrument modelc

Exactive Plusc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002526

has super-classes
Thermo Scientific instrument modelc

excludes supersede includesc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000921

has super-classes
target inclusion exclusion priorityc

Expect valuec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001192

has super-classes
peptide sequence-level identification statisticc
single protein identification statisticc
has value typeop some xsd doublec

Experiment additional parameterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002844

has super-classes
spectrum generation informationc
has sub-classes
Accepted manuscriptc, Associated file URIc, Data derived from previous datasetc, Dataset FTP locationc, Dataset with its publication pendingc, Dataset with no associated published manuscriptc, Experimental information has been refined since this experiment was originally made publicly availablec, No PTMs are included in the datasetc, Non peer-reviewed datasetc, Original datac, Peer-reviewed datasetc, ProteomeCentral dataset URIc, Referencec, Reprocessed complete datasetc, Reprocessed subset datasetc, Supported dataset by repositoryc, Unsupported dataset by repositoryc, supported by repository but incomplete data and/or metadatac

experiment namec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002120

has super-classes
quantification object attributec

experimental condition 'case'c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001810

has super-classes
study variable attributec

experimental condition 'control'c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001811

has super-classes
study variable attributec

experimental condition 'disease'c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001812

has super-classes
study variable attributec

experimental condition 'healthy'c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001813

has super-classes
study variable attributec

Experimental information has been refined since this experiment was originally made publicly availablec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002867

has super-classes
Experiment additional parameterc

experimental precursor monoisotopic m/zc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003208

has super-classes
ion selection attributec
has_unitsop some m/zc
has value typeop some xsd floatc

explorerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000158

has super-classes
IonSpec instrument modelc

exponentialc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000094

has super-classes
scan lawc

external array lengthc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002843

has super-classes
external reference datac
has_unitsop some u o 0000189c
has value typeop some xsd non negative integerc

external HDF5 datasetc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002841

has super-classes
external reference datac
has value typeop some xsd stringc

external offsetc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002842

has super-classes
external reference datac
has_unitsop some u o 0000189c
has value typeop some xsd non negative integerc

external reference datac back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002840

has super-classes
part_ofop some Proteomics Standards Initiative Mass Spectrometry Vocabulariesc
has sub-classes
external HDF5 datasetc, external array lengthc, external offsetc, external reference identifierc, external reference keywordc

external reference identifierc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000878

has super-classes
external reference datac
has sub-classes
CPTAC accession numberc, Digital Object Identifier (DOI)c, MassIVE dataset URIc, MassIVE dataset identifierc, PASSEL experiment URIc, PASSEL transition group browser URIc, PRIDE experiment URIc, PRIDE project URIc, Panorama Public dataset URIc, Panorama Public dataset identifierc, PeptideAtlas dataset URIc, ProteomeXchange accession numberc, ProteomeXchange accession number version numberc, ProteomeXchange dataset identifier reanalysis numberc, ProteomeXchange project tagc, PubMed identifierc, Tranche file hashc, Tranche project hashc, iProX dataset URIc, iProX dataset identifierc, jPOST dataset URIc, jPOST dataset identifierc

external reference keywordc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001923

has super-classes
external reference datac
has value typeop some xsd stringc
has sub-classes
curator keywordc, journal article keywordc, submitter keywordc

FAIMS compensation voltagec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001581

has super-classes
ion mobility attributec
has_unitsop some u o 0000218c
has value typeop some xsd doublec

false localization ratec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002380

has super-classes
spectrum identification result detailsc
has value typeop some xsd doublec

family member proteinc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001592

has super-classes
protein group or subset relationshipc
has value typeop some xsd stringc

faraday cupc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000112

has super-classes
detector typec

fast atom bombardment ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000074

has super-classes
ionization typec

fast evaporation MALDI sample preparationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001989

has super-classes
matrix application typec

fast ion bombardmentc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000446

has super-classes
ionization typec

FASTA formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001348

has super-classes
database file formatsc

fastest frequency for MS level 1 collectionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_4000065

Spectrum acquisition frequency can be used to gauge the suitability of used instrument settings for the sample content used.
has super-classes
single valuec
has_metric_categoryop some ID free metricc
has_metric_categoryop some single run based metricc
has_metric_categoryop some MS1 metricc
has_unitsop some u o 0000106c
has value typeop some xsd floatc

fastest frequency for MS level 2 collectionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_4000066

Spectrum acquisition frequency can be used to gauge the suitability of used instrument settings for the sample content used.
has super-classes
single valuec
has_metric_categoryop some ID free metricc
has_metric_categoryop some single run based metricc
has_metric_categoryop some MS2 metricc
has_unitsop some u o 0000106c
has value typeop some xsd floatc

FDRScorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001874

This term was made obsolete because it was split into the more specific terms for PSM-level FDRScore (1002355), distinct peptide-level FDRScore (MS:1002360), protein-level FDRScore (MS:1002365) and protein group-level FDRScore (MS:1002374).
has super-classes
PSM-level search engine specific statisticc
search engine specific scorec
has value typeop some xsd doublec

FDRScore for proteinsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002365

has super-classes
search engine specific score for proteinsc
has_domainop some value greater than zero but less than or equal to onec
has value typeop some xsd doublec

feature attributec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001828

has super-classes
quantification object attributec
has sub-classes
SRM transition IDc, spectral count featurec

feature formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002900

has super-classes
mass spectrometer file formatc

feature list attributec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001825

has super-classes
quantification object attributec
has sub-classes
counts reportingc, mass trace reporting: polygonsc, mass trace reporting: rectanglesc

feature-level quantification datatypec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002735

has super-classes
quantification datatypec
has sub-classes
LC-MS feature intensityc, LC-MS feature volumec, MS1 feature areac, MS1 feature maximum intensityc, MaxQuant:feature intensityc, Progenesis:feature intensityc, XCMS:areac, XCMS:intfc, XCMS:intoc, XCMS:maxoc, sum of MatchedFeature valuesc

featureXMLc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002824

has super-classes
OpenMS file formatc

fed supply electrosprayc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001943

has super-classes
electrospray supply typec

field desorptionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000257

has super-classes
desorption ionizationc

field ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000258

has super-classes
ionization typec

field-free regionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000216

has super-classes
ion optics attributec

file formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001459

has super-classes
part_ofop some Proteomics Standards Initiative Mass Spectrometry Vocabulariesc
has sub-classes
OpenMS file formatc, chromatograph file formatc, identification file formatc, intermediate analysis formatc, mass spectrometer file formatc, method file formatc, quality control data formatc, quantification file formatc, tab delimited text formatc

file format conversionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000530

has super-classes
data transformationc
has sub-classes
Conversion to dtac, Conversion to mzDatac, Conversion to mzMLc, Conversion to mzMLbc, Conversion to mzXMLc

FileConverterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000756

has super-classes
TOPP softwarec

FileFilterc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000757

has super-classes
TOPP softwarec

FileMergerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000758

has super-classes
TOPP softwarec

filter stringc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000512

has super-classes
scan attributec
has value typeop some xsd stringc

final MS exponentc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000024

has super-classes
mass analyzer attributec
has value typeop some xsd intc

final PSM listc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002439

has super-classes
spectrum identification list result detailsc

FindPairsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002063

has super-classes
quantitation software namec

Finnigan MAT instrument modelc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000493

has super-classes
Thermo Fisher Scientific instrument modelc
has sub-classes
MAT253c, MAT900XPc, MAT900XP Trapc, MAT95XPc, MAT95XP Trapc, SSQ 7000c, TSQc, TSQ 7000c

first authorc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002034

has super-classes
contact rolec

first column elution timec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002082

has super-classes
scan attributec
has_unitsop some u o 0000010c
has_unitsop some u o 0000031c
has value typeop some xsd floatc

first stability regionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000309

has super-classes
ion optics typec

Fixed modificationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003021

has super-classes
modification parametersc
named element in mzIdentMLc

FlexAnalysisc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000535

has super-classes
Bruker softwarec
analysis softwarec
data processing softwarec

FlexControlc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000540

has super-classes
Bruker softwarec
acquisition softwarec

flexImagingc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000722

has super-classes
Bruker softwarec
analysis softwarec
data processing softwarec

flow injection analysisc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000058

has super-classes
inlet typec

flow rate arrayc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000820

has super-classes
binary data arrayc
has_unitsop some u o 0000271c

flow rate chromatogramc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003020

has super-classes
chromatogram typec

flowing afterglowc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000255

has super-classes
ionization typec

fluorescence detectorc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002308

has super-classes
detector typec
has sub-classes
Acquity UPLC FLRc

focal plane arrayc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000113

has super-classes
focal plane collectorc

focal plane collectorc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000348

has super-classes
detector typec
has sub-classes
focal plane arrayc

focus diameter xc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000844

has super-classes
laser attributec
has_unitsop some u o 0000017c
has value typeop some xsd floatc

focus diameter yc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000845

has super-classes
laser attributec
has_unitsop some u o 0000017c
has value typeop some xsd floatc

Formic_acidc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001308

has super-classes
cleavage agent namec
has regexpop some ((?<=D))|((?=D))c

four sample runc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001821

has super-classes
raw file attributec

fourier transform ion cyclotron resonance mass spectrometerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000079

has super-classes
mass analyzer typec

fraction identifierc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000858

has super-classes
run attributec
has value typeop some xsd stringc

frag: a ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001229

has super-classes
fragmentation ion typec

frag: a ion - H2Oc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001234

has super-classes
fragmentation ion typec

frag: a ion - NH3c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001235

has super-classes
fragmentation ion typec

frag: b ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001224

has super-classes
fragmentation ion typec

frag: b ion - H2Oc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001222

has super-classes
fragmentation ion typec

frag: b ion - NH3c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001232

has super-classes
fragmentation ion typec

frag: c ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001231

has super-classes
fragmentation ion typec

frag: c ion - H2Oc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001515

has super-classes
fragmentation ion typec

frag: c ion - NH3c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001516

has super-classes
fragmentation ion typec

frag: d ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001236

has super-classes
fragmentation ion typec

frag: immonium ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001239

has super-classes
fragmentation ion typec

frag: internal ya ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001366

has super-classes
fragmentation ion typec

frag: internal yb ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001365

has super-classes
fragmentation ion typec

frag: isobaric label ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002695

has super-classes
fragmentation ion typec

frag: iTRAQ 4plex reporter ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002668

has super-classes
fragmentation ion typec
has value typeop some xsd intc

frag: iTRAQ 8plex reporter ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002669

has super-classes
fragmentation ion typec
has value typeop some xsd intc

frag: precursor ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001523

has super-classes
fragmentation ion typec

frag: precursor ion - H2Oc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001521

has super-classes
fragmentation ion typec

frag: precursor ion - NH3c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001522

has super-classes
fragmentation ion typec

frag: TMT ETD reporter ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002671

has super-classes
fragmentation ion typec
has value typeop some xsd stringc

frag: TMT reporter ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002670

has super-classes
fragmentation ion typec
has value typeop some xsd stringc

frag: v ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001237

has super-classes
fragmentation ion typec

frag: w ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001238

has super-classes
fragmentation ion typec

frag: x ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001228

has super-classes
fragmentation ion typec

frag: x ion - H2Oc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001519

has super-classes
fragmentation ion typec

frag: x ion - NH3c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001520

has super-classes
fragmentation ion typec

frag: y ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001220

has super-classes
fragmentation ion typec

frag: y ion - H2Oc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001223

has super-classes
fragmentation ion typec

frag: y ion - NH3c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001233

has super-classes
fragmentation ion typec

frag: z ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001230

has super-classes
fragmentation ion typec

frag: z ion - H2Oc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001517

has super-classes
fragmentation ion typec

frag: z ion - NH3c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001518

has super-classes
fragmentation ion typec

frag: z+1 ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001367

has super-classes
fragmentation ion typec

frag: z+2 ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001368

has super-classes
fragmentation ion typec

fragment ionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000364

This term was made obsolete because it was replaced by product ion (MS:1000342).

fragment mass type averagec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001255

has super-classes
mass type settingsc

fragment mass type monoc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001256

has super-classes
mass type settingsc

fragment neutral lossc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001524

has super-classes
peptide modification detailsc
has_unitsop some u o 0000221c
has value typeop some xsd doublec

fragmentation ion typec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002307

has super-classes
product ion attributec
has sub-classes
frag: TMT ETD reporter ionc, frag: TMT reporter ionc, frag: a ionc, frag: a ion - H2Oc, frag: a ion - NH3c, frag: b ionc, frag: b ion - H2Oc, frag: b ion - NH3c, frag: c ionc, frag: c ion - H2Oc, frag: c ion - NH3c, frag: d ionc, frag: iTRAQ 4plex reporter ionc, frag: iTRAQ 8plex reporter ionc, frag: immonium ionc, frag: internal ya ionc, frag: internal yb ionc, frag: isobaric label ionc, frag: precursor ionc, frag: precursor ion - H2Oc, frag: precursor ion - NH3c, frag: v ionc, frag: w ionc, frag: x ionc, frag: x ion - H2Oc, frag: x ion - NH3c, frag: y ionc, frag: y ion - H2Oc, frag: y ion - NH3c, frag: z ionc, frag: z ion - H2Oc, frag: z ion - NH3c, frag: z+1 ionc, frag: z+2 ionc, secondary isotope peakc

fragmentation scorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002890

has super-classes
small molecule confidence measurec
has value typeop some xsd floatc

free electron laserc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000853

has super-classes
laser typec

fringing fieldc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000310

has super-classes
ion optics typec

full scanc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000498

This former purgatory term was made obsolete.

full width at half-maximumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000086

has super-classes
resolution measurement methodc

gas chromatography separationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002272

has super-classes
chromatography separationc

gas laserc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000850

has super-classes
laser typec

gaseous sample statec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000048

has super-classes
sample statec

Gaussian smoothingc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000784

has super-classes
smoothingc

GC IsoLinkc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000648

has super-classes
Thermo Scientific instrument modelc

GC Quantumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000558

has super-classes
Thermo Finnigan instrument modelc

GCMS-QP2010SEc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003152

has super-classes
Shimadzu Scientific Instruments instrument modelc

GCTc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000159

has super-classes
Waters instrument modelc

GCT Premierc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001770

has super-classes
Waters instrument modelc

Gel image file URIc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002860

has super-classes
Associated file URIc
has value typeop some xsd stringc

gene namec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000934

has super-classes
protein attributec
has value typeop some xsd stringc

GeneralCommentc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0000021

has super-classes
PEFF file header section termc
has value typeop some xsd stringc

generic experimental conditionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001814

has super-classes
study variable attributec
has value typeop some xsd stringc

Genespring MSc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000684

has super-classes
Agilent softwarec
analysis softwarec
data processing softwarec

GENOLINKc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000723

has super-classes
Bruker softwarec

genome reference versionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002644

has super-classes
proteogenomics attributec
has value typeop some xsd stringc

GenoToolsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000724

has super-classes
Bruker softwarec

global FLRc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002691

has super-classes
PTM localization result list statisticc

glow discharge ionizationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000259

has super-classes
ionization typec

glutamyl endopeptidasec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001917

has super-classes
cleavage agent namec
has regexpop some (?<=[^E]E)c

glycan ion interpretation formatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1003106

has super-classes
ion interpretation formatc

glyco-TMT quantitation analysisc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002757

has super-classes
isobaric label quantitation analysisc

GNamec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0001005

has super-classes
PEFF file sequence entry termc
has value typeop some xsd stringc

GOc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PEFF_0001018

has super-classes
PEFF file sequence entry termc
has value typeop some xsd stringc

GPS Explorerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000661

has super-classes
SCIEX softwarec
acquisition softwarec
analysis softwarec
data processing softwarec

Greazyc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002970

has super-classes
data processing softwarec
lipidomics analysis softwarec

greylagc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001461

has super-classes
analysis softwarec

group member with undefined relationship OR ortholog proteinc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001593

has super-classes
protein group or subset relationshipc

group PSMs by sequencec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002496

has super-classes
identification parameterc

group PSMs by sequence with modificationsc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002497

has super-classes
identification parameterc

group PSMs by sequence with modifications and chargec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002498

has super-classes
identification parameterc

group representativec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002403

has super-classes
protein group or subset relationshipc

H-PINS retention time normalization standardc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1000902

has super-classes
retention time normalization standardc

H-Scorec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1001986

has super-classes
PTM localization PSM-level statisticc
has regexpop some regular expression for modification localization scoringc
has value typeop some xsd stringc

H-Score thresholdc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/MS_1002559

has super-classes
PTM localization score thresholdc<