made by pyLODE 2.10.0

Ontology for BIoBanking (OBIB)

Metadata

URI
http://purl.obolibrary.org/obo/obib.owl
Contributor(s)
Alice Nzinga
Chris Stoeckert
Jan-Eric Litton
Jie Zheng
Loreana Norlin
Maria Anderberg
Martin N. Fransson
Mathias Brochhausen
Mikael Eriksson
Roxana Merino-Martinez
Sanela Kjellqvist
William R. Hogan
Version Information
2021-02-02
Version URI
http://purl.obolibrary.org/obo/obib/2021-02-02/obib.owl
License
http://creativecommons.org/licenses/by/4.0/
Ontology RDF
RDF (turtle)

Description

The Ontology for Biobanking (OBIB) is an ontology for the annotation and modeling of the activities, contents, and administration of a biobank. Biobanks are facilities that store specimens, such as bodily fluids and tissues, typically along with specimen annotation and clinical data. OBIB is based on a subset of the Ontology for Biomedical Investigation (OBI), has the Basic Formal Ontology (BFO) as its upper ontology, and is developed following OBO Foundry principles. The first version of OBIB resulted from the merging of two existing biobank-related ontologies, OMIABIS and biobank ontology.

Table of Contents

  1. Classes
  2. Object Properties
  3. Functional Properties
  4. Datatype Properties
  5. Annotation Properties
  6. Named Individuals
  7. Namespaces
  8. Legend

Overview

Pictures say 1,000 words
Figure 1: Ontology overview

Classes ↑

countc # Classes

URI http://purl.obolibrary.org/obo/APOLLO_SV_00000032
Description

It can be denoted as an arithmetic value or in form of a word, and is usually as a result of a process.
Super-classes obo:IAO_0000109c
Sub-classes obo:OBIB_0000139c
obo:OMIABIS_0001010c
obo:OMIABIS_0001011c
obo:OBIB_0000141c

countingc # Classes

URI http://purl.obolibrary.org/obo/APOLLO_SV_00000033
Super-classes obo:OBI_0000011c

age data by age bracketsc # Classes

URI http://purl.obolibrary.org/obo/APOLLO_SV_00000085
Super-classes obo:IAO_0000100c
(obo:IAO_0000100c and ub385bL48C13c)

ORCIDc # Classes

URI http://purl.obolibrary.org/obo/APOLLO_SV_00000496
Super-classes obo:IAO_0020000c

entityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000001
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes owl:Thingc
Sub-classes obo:BFO_0000002c
obo:BFO_0000003c
In domain of obo:IAO_0000235op
In range of obo:IAO_0020012op
obo:IAO_0000219op

continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000002
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000001c
Sub-classes obo:BFO_0000004c
obo:BFO_0000031c
obo:BFO_0000020c
In domain of obo:RO_0000056op
In range of obo:RO_0000057op

occurrentc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000003
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000001c
Sub-classes obo:BFO_0000015c
obo:BFO_0000008c
obo:BFO_0000011c
obo:BFO_0000035c
In domain of obo:RO_0000057op
obo:BFO_0000066op
In range of obo:BFO_0000156op
obo:RO_0000056op
obo:RO_0002222op

independent continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000004
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000002c
Sub-classes obo:BFO_0000141c
obo:BFO_0000040c
In domain of obo:RO_0000085op
obo:RO_0001025op
obo:RO_0000087op
obo:RO_0000091op
obo:RO_0001000op
In range of obo:RO_0001000op
obo:RO_0001025op
obo:BFO_0000066op

obsolete dependent continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000005
Super-classes oboInOwl:ObsoleteClassc

spatial regionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000006
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000141c
Sub-classes obo:BFO_0000018c
obo:BFO_0000009c
obo:BFO_0000028c
obo:BFO_0000026c

temporal regionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000008
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000003c
Sub-classes obo:BFO_0000038c
obo:BFO_0000148c

two-dimensional spatial regionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000009
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000006c

spatiotemporal regionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000011
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000003c

processc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000015
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000003c
Sub-classes obo:OBI_0000011c
obo:OBI_0000339c
obo:IDO_0000610c
obo:GO_0008150c
obo:BFO_0000144c
obo:IAO_0020023c
obo:BFO_0000182c
In domain of obo:BFO_0000055op
obo:RO_0002211op
obo:BFO_0000184op
In range of obo:IAO_0000413op
obo:BFO_0000185op
obo:BFO_0000054op
obo:RO_0002211op

dispositionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000016
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000017c
Sub-classes obo:IDO_0000450c
efo:EFO_0003919c
obo:OGMS_0000031c
obo:BFO_0000034c
obo:IDO_0000619c
In range of obo:RO_0000091op

realizable entityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000017
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000020c
Sub-classes obo:BFO_0000016c
obo:BFO_0000023c
obo:OBI_0000260c
obo:ICO_0000146c
In domain of obo:BFO_0000054op
In range of obo:BFO_0000055op

zero-dimensional spatial regionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000018
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000006c

qualityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000019
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000020c
Sub-classes obo:BFO_0000145c
obo:PATO_0001241c
obo:OBIB_0000220c
obo:OGMS_0000023c
In range of obo:IAO_0000221op
obo:RO_0000086op

specifically dependent continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000020
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000002c
Sub-classes obo:ERO_0002033c
obo:BFO_0000019c
obo:OBIB_0000481c
obo:BFO_0000017c
In domain of obo:RO_0000059op
In range of obo:RO_0000053op
obo:RO_0000058op

rolec # Classes

URI http://purl.obolibrary.org/obo/BFO_0000023
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000017c
Sub-classes obo:OBI_0000444c
obo:IAO_0020024c
obo:OBIB_0000026c
obo:OBI_0000947c
obo:OBIB_0000069c
obo:OBIB_0000273c
obo:OBIB_0000484c
obo:OBI_0000093c
obo:OBI_0000941c
obo:CHEBI_50913c
obo:OBI_0000017c
obo:OBIB_0000272c
obo:OBI_0000097c
obo:OBI_0000086c
obo:OBI_0000067c
obo:OBIB_0000291c
obo:OBI_1110087c
obo:OBI_0000319c
obo:OMRSE_00000024c
obo:OBIB_0000350c
obo:OBI_0002444c
obo:OBIB_0000458c
obo:OBI_0000112c
obo:OBI_0000571c
obo:OBI_0000202c
In range of obo:RO_0000087op

fiat object partc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000024
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000040c

one-dimensional spatial regionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000026
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000006c

object aggregatec # Classes

URI http://purl.obolibrary.org/obo/BFO_0000027
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000040c
Sub-classes obo:OMIABIS_0000033c
obo:PCO_0000000c
obo:OMIABIS_0000000c

three-dimensional spatial regionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000028
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000006c

sitec # Classes

URI http://purl.obolibrary.org/obo/BFO_0000029
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000141c
Sub-classes obo:GAZ_00000448c

objectc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000030
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000040c
Sub-classes obo:GEO_000000102c

generically dependent continuantc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000031
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000002c
Sub-classes obo:IAO_0000030c
obo:SO_0000001c
In domain of obo:RO_0000058op
In range of obo:RO_0000059op

functionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000034
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000016c
Sub-classes obo:OBI_0000370c
obo:OBI_0000387c
obo:OBI_0000372c
obo:OBI_0000371c
obo:OBI_0000453c
obo:OBI_0000383c
obo:OBI_0000401c
obo:OBI_0000379c
obo:OBI_0000960c
obo:OBI_0000399c
In domain of obo:RO_0000079op
In range of obo:RO_0000085op

process boundaryc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000035
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000003c
Sub-classes obo:UBERON_0035944c
obo:OMIABIS_0001081c
obo:OMIABIS_0001082c

one-dimensional temporal regionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000038
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000008c
Sub-classes obo:OBIB_0000516c

material entityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000040
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000004c
Sub-classes obo:OMRSE_00000033c
obo:BFO_0000024c
obo:BFO_0000030c
obo:OBI_0100026c
obo:GO_0032991c
obo:OBIB_0000029c
obo:IAO_0000178c
obo:OGMS_0000045c
obo:CL_0000000c
obo:OBI_0000835c
obo:OBI_0000245c
obo:CHEBI_33250c
obo:OMIABIS_0000041c
obo:OBIB_0000028c
obo:OBI_1110109c
obo:BFO_0000027c
obo:OBI_0000181c
obo:OBI_0002076c
obo:UBERON_0000465c
obo:OMIABIS_0000024c
obo:CHEBI_23367c
obo:OBI_0000047c
obo:UBERON_0000477c
obo:ENVO_00010483c
obo:OBI_0100051c
obo:IDO_0000528c
In domain of obo:RO_0002002op
obo:OBI_0001637op
obo:BFO_0000185op
In range of obo:BFO_0000184op
obo:OBI_0001637op

continuant fiat boundaryc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000140
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000141c
Sub-classes obo:BFO_0000147c
obo:BFO_0000146c
obo:BFO_0000142c

immaterial entityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000141
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000004c
Sub-classes obo:BFO_0000006c
obo:BFO_0000029c
obo:FMA_50707c
obo:BFO_0000140c
In range of obo:RO_0002002op

one-dimensional continuant fiat boundaryc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000142
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000140c

process profilec # Classes

URI http://purl.obolibrary.org/obo/BFO_0000144
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000015c

relational qualityc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000145
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000019c

two-dimensional continuant fiat boundaryc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000146
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000140c

zero-dimensional continuant fiat boundaryc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000147
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000140c

zero-dimensional temporal regionc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000148
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000008c

historyc # Classes

URI http://purl.obolibrary.org/obo/BFO_0000182
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Super-classes obo:BFO_0000015c

fentanylc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_119915
Super-classes obo:CHEBI_23367c

ethanolc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_16236
Super-classes obo:CHEBI_30879c

peptidec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_16670
Super-classes obo:CHEBI_33839c
Sub-classes obo:PR_000000001c

formaldehydec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_16842
Super-classes obo:CHEBI_23367c

deoxyribonucleic acidc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_16991
Super-classes obo:CHEBI_33696c

dinitrogen oxidec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_17045
Super-classes obo:CHEBI_23367c

morphinec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_17303
Super-classes obo:CHEBI_23367c

nicotinec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_18723
Super-classes obo:CHEBI_23367c

molecular entityc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_23367
Super-classes obo:BFO_0000040c
Sub-classes obo:CHEBI_44915c
obo:CHEBI_8430c
obo:CHEBI_53258c
obo:CHEBI_42191c
obo:CHEBI_9561c
obo:CHEBI_4910c
obo:CHEBI_5790c
obo:CHEBI_6121c
obo:CHEBI_49575c
obo:CHEBI_17303c
obo:CHEBI_35341c
obo:CHEBI_33839c
obo:CHEBI_61219c
obo:CHEBI_7773c
obo:CHEBI_6015c
obo:CHEBI_27338c
obo:CHEBI_6456c
obo:CHEBI_3215c
obo:CHEBI_16842c
obo:CHEBI_9939c
obo:CHEBI_6754c
obo:CHEBI_30879c
obo:CHEBI_52993c
obo:OBI_0002744c
obo:CHEBI_8776c
obo:CHEBI_17045c
obo:CHEBI_6834c
obo:CHEBI_4717c
obo:CHEBI_119915c
obo:CHEBI_7907c
obo:CHEBI_18723c

xylenec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_27338
Super-classes obo:CHEBI_23367c

alcoholc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_30879
Super-classes obo:CHEBI_23367c
Sub-classes obo:CHEBI_16236c

bupivacainec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_3215
Super-classes obo:CHEBI_23367c

atomc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_33250
Super-classes obo:BFO_0000040c

antimicrobial agentc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_33281
Super-classes obo:OBIB_0000026c

nucleic acidc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_33696
Super-classes obo:CHEBI_33839c
Sub-classes obo:CHEBI_16991c
obo:CHEBI_33697c

ribonucleic acidc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_33697
Super-classes obo:CHEBI_33696c

macromoleculec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_33839
Super-classes obo:CHEBI_23367c
Sub-classes obo:CHEBI_16670c
obo:CHEBI_33696c

steroidc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_35341
Super-classes obo:CHEBI_23367c

opioid analgesicc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_35482
Super-classes obo:OBIB_0000026c

sedativec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_35717
Super-classes obo:OBIB_0000026c

local anaestheticc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_36333
Super-classes obo:CHEBI_38867c

anaestheticc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_38867
Super-classes obo:OBIB_0000026c
Sub-classes obo:CHEBI_38877c
obo:CHEBI_38870c
obo:CHEBI_36333c

inhalation anaestheticc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_38870
Super-classes obo:CHEBI_38867c

intravenous anaestheticc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_38877
Super-classes obo:CHEBI_38867c

ethylenediaminetetraacetic acidc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_42191
Super-classes obo:CHEBI_23367c
Restrictions obo:RO_0000087op some obo:OBIB_0000022c

propofolc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_44915
Super-classes obo:CHEBI_23367c

droperidolc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_4717
Super-classes obo:CHEBI_23367c

etomidatec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_4910
Super-classes obo:CHEBI_23367c

diazepamc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_49575
Super-classes obo:CHEBI_23367c

fixativec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_50913
Super-classes obo:BFO_0000023c

antiemeticc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_50919
Super-classes obo:OBIB_0000026c

muscle relaxantc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_51371
Super-classes obo:OBIB_0000026c

lormetazepamc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_52993
Super-classes obo:CHEBI_23367c

sodium citratec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_53258
Super-classes obo:CHEBI_23367c
Restrictions obo:RO_0000087op some obo:OBIB_0000022c

hydromorphonec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_5790
Super-classes obo:CHEBI_23367c

isofluranec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_6015
Super-classes obo:CHEBI_23367c

ketaminec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_6121
Super-classes obo:CHEBI_23367c

succinylcholine chloride (anhydrous)c # Classes

URI http://purl.obolibrary.org/obo/CHEBI_61219
Super-classes obo:CHEBI_23367c

lidocainec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_6456
Super-classes obo:CHEBI_23367c

antacidc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_65265
Super-classes obo:OBIB_0000026c

pethidinec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_6754
Super-classes obo:CHEBI_23367c

methohexital sodiumc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_6834
Super-classes obo:CHEBI_23367c

Ondansetronc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_7773
Super-classes obo:CHEBI_23367c

pancuroniumc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_7907
Super-classes obo:CHEBI_23367c

procainec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_8430
Super-classes obo:CHEBI_23367c

ranitidinec # Classes

URI http://purl.obolibrary.org/obo/CHEBI_8776
Super-classes obo:CHEBI_23367c

thiopental sodiumc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_9561
Super-classes obo:CHEBI_23367c

vecuroniumc # Classes

URI http://purl.obolibrary.org/obo/CHEBI_9939
Super-classes obo:CHEBI_23367c

cell line cellc # Classes

URI http://purl.obolibrary.org/obo/CLO_0000001
Super-classes (ub385bL1088C22c or ub385bL1093C13c)
obo:OBI_0001866c
Restrictions obo:RO_0001000op some obo:CL_0000001c
Sub-classes obo:CLO_0000019c

immortal cell line cellc # Classes

URI http://purl.obolibrary.org/obo/CLO_0000019
Super-classes obo:CLO_0000001c

cell linec # Classes

URI http://purl.obolibrary.org/obo/CLO_0000031
Super-classes obo:OBI_0001905c
Restrictions obo:OBI_0000643op only obo:CLO_0000001c
obo:OBI_0000643op some obo:CLO_0000001c
Sub-classes obo:CLO_0009828c

immortal cell linec # Classes

URI http://purl.obolibrary.org/obo/CLO_0009828
Super-classes obo:CLO_0000031c
Restrictions obo:OBI_0000643op only obo:CLO_0000019c
obo:OBI_0000643op some obo:CLO_0000019c

cellc # Classes

URI http://purl.obolibrary.org/obo/CL_0000000
Super-classes obo:BFO_0000040c
Sub-classes obo:CL_0000578c
obo:CL_0000738c
obo:CL_0000232c
obo:CL_0000558c

primary cultured cellc # Classes

URI http://purl.obolibrary.org/obo/CL_0000001
Super-classes ()
obo:CL_0000010c
()

cultured cellc # Classes

URI http://purl.obolibrary.org/obo/CL_0000010
Super-classes obo:CL_0000578c
(ub385bL1197C22c or ub385bL1202C13c)
Sub-classes obo:OBI_0001866c
obo:CL_0000001c

erythrocytec # Classes

URI http://purl.obolibrary.org/obo/CL_0000232
Super-classes obo:CL_0000000c

reticulocytec # Classes

URI http://purl.obolibrary.org/obo/CL_0000558
Super-classes obo:CL_0000000c

experimentally modified cell in vitroc # Classes

URI http://purl.obolibrary.org/obo/CL_0000578
Super-classes obo:CL_0000000c
obo:OBI_0000047c
Restrictions obo:OBI_0000312op some obo:OBI_0000094c
Sub-classes obo:CL_0000010c

leukocytec # Classes

URI http://purl.obolibrary.org/obo/CL_0000738
Super-classes obo:CL_0000000c

cell type cancerc # Classes

URI http://purl.obolibrary.org/obo/DOID_0050687
Super-classes obo:DOID_162c

lung combined type small cell adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_0050917
Super-classes obo:DOID_3905c

ovarian serous carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_0050933
Super-classes obo:DOID_2394c
Sub-classes obo:NCIT_C5226c

ovarian clear cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_0050934
Super-classes obo:DOID_2394c
Sub-classes obo:NCIT_C40080c

medullary colon carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_0080183
Super-classes obo:DOID_1520c

mixed mucinous and nonmucinous bronchioloalveolar adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_0080184
Super-classes obo:DOID_4926c

mucinous bronchioloalveolar adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_0080185
Super-classes obo:DOID_4926c

nonmucinous bronchioloalveolar adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_0080186
Super-classes obo:DOID_4926c

colon carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_1520
Super-classes obo:DOID_162c
Sub-classes obo:DOID_3033c
obo:DOID_3029c
obo:DOID_0080183c
obo:DOID_5519c
obo:DOID_234c
obo:NCIT_C7100c
obo:DOID_5629c
obo:DOID_6727c

cancerc # Classes

URI http://purl.obolibrary.org/obo/DOID_162
Super-classes obo:OGMS_0000031c
Sub-classes obo:DOID_1520c
obo:DOID_2394c
obo:DOID_3905c
obo:DOID_4451c
obo:DOID_769c
obo:DOID_0050687c

sex cord-gonadal stromal tumorc # Classes

URI http://purl.obolibrary.org/obo/DOID_192
Super-classes obo:DOID_2394c

ovary epithelial cancerc # Classes

URI http://purl.obolibrary.org/obo/DOID_2152
Super-classes obo:DOID_2394c
Sub-classes obo:NCIT_C7281c

malignant ovarian germ cell neoplasmc # Classes

URI http://purl.obolibrary.org/obo/DOID_2155
Super-classes obo:DOID_2394c

colon adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_234
Super-classes obo:DOID_1520c

ovarian cancerc # Classes

URI http://purl.obolibrary.org/obo/DOID_2394
Super-classes obo:DOID_162c
Sub-classes obo:DOID_0050933c
obo:DOID_6170c
obo:DOID_5828c
obo:DOID_2152c
obo:DOID_2999c
obo:DOID_5531c
obo:DOID_0050934c
obo:DOID_4000c
obo:DOID_192c
obo:DOID_3604c
obo:NCIT_C4509c
obo:DOID_6067c
obo:DOID_4217c
obo:DOID_2155c
obo:DOID_5746c

granulosa cell tumorc # Classes

URI http://purl.obolibrary.org/obo/DOID_2999
Super-classes obo:DOID_2394c

colon mucinous adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_3029
Super-classes obo:DOID_1520c

colon signet ring adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_3033
Super-classes obo:DOID_1520c

ovarian mucinous cystadenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_3604
Super-classes obo:DOID_2394c

lung carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_3905
Super-classes obo:DOID_162c
Sub-classes obo:DOID_3907c
obo:DOID_3910c
obo:DOID_0050917c
obo:DOID_7045c

lung squamous cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_3907
Super-classes obo:DOID_3905c
Sub-classes obo:NCIT_C45502c
obo:NCIT_C45504c
obo:NCIT_C45503c

lung adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_3910
Super-classes obo:DOID_3905c
Sub-classes obo:DOID_7267c
obo:NCIT_C45514c
obo:NCIT_C5651c
obo:DOID_6482c
obo:DOID_5588c
obo:DOID_4926c
obo:NCIT_C45512c

ovary transitional cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_4000
Super-classes obo:DOID_2394c
Sub-classes obo:NCIT_C40088c

malignant ovarian Brenner tumorc # Classes

URI http://purl.obolibrary.org/obo/DOID_4217
Super-classes obo:DOID_2394c

renal cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_4450
Super-classes obo:DOID_4451c

renal carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_4451
Super-classes obo:DOID_162c
Sub-classes obo:NCIT_C27891c
obo:DOID_4450c
obo:DOID_4465c
obo:DOID_4467c
obo:NCIT_C126303c
obo:DOID_4471c
obo:DOID_4464c
obo:DOID_4463c
obo:DOID_4472c

multilocular clear cell renal cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_4463
Super-classes obo:DOID_4451c

collecting duct carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_4464
Super-classes obo:DOID_4451c

papillary renal cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_4465
Super-classes obo:DOID_4451c

clear cell renal cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_4467
Super-classes obo:DOID_4451c

chromophobe renal cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_4471
Super-classes obo:DOID_4451c

mucinous tubular and spindle renal cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_4472
Super-classes obo:DOID_4451c

bronchiolo-alveolar adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_4926
Super-classes obo:DOID_3910c
Sub-classes obo:DOID_0080185c
obo:DOID_0080184c
obo:DOID_0080186c

colon squamous cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_5519
Super-classes obo:DOID_1520c

ovarian squamous cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_5531
Super-classes obo:DOID_2394c

lung papillary adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_5588
Super-classes obo:DOID_3910c

adenosquamous colon carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_5629
Super-classes obo:DOID_1520c

ovarian serous cystadenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_5746
Super-classes obo:DOID_2394c

endometrioid ovary carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_5828
Super-classes obo:DOID_2394c
Sub-classes obo:NCIT_C7983c

ovarian mucinous neoplasmc # Classes

URI http://purl.obolibrary.org/obo/DOID_6067
Super-classes obo:DOID_2394c
Sub-classes obo:NCIT_C40038c
obo:NCIT_C40037c

ovarian carcinosarcomac # Classes

URI http://purl.obolibrary.org/obo/DOID_6170
Super-classes obo:DOID_2394c

lung acinar adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_6482
Super-classes obo:DOID_3910c

colon small cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_6727
Super-classes obo:DOID_1520c

basaloid lung carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_7045
Super-classes obo:DOID_3905c

lung clear cell carcinomac # Classes

URI http://purl.obolibrary.org/obo/DOID_7267
Super-classes obo:DOID_3910c

neuroblastomac # Classes

URI http://purl.obolibrary.org/obo/DOID_769
Super-classes obo:DOID_162c

Paraffinc # Classes

URI http://purl.obolibrary.org/obo/DRON_00015464
Super-classes obo:OBI_0000047c
Sub-classes obo:OBIB_0000311c

Midazolamc # Classes

URI http://purl.obolibrary.org/obo/DRON_00017834
Super-classes obo:OBI_0000047c

environmental materialc # Classes

URI http://purl.obolibrary.org/obo/ENVO_00010483
Super-classes obo:BFO_0000040c

in vitro transcriptionc # Classes

URI http://purl.obolibrary.org/obo/ERO_0000905
Super-classes obo:OBI_0000094c

freezerc # Classes

URI http://purl.obolibrary.org/obo/ERO_0000979
Super-classes obo:OBI_0000967c
Restrictions obo:RO_0000085op some obo:OBI_0000370c
obo:BFO_0000051op some obo:OBIB_0000015c
obo:BFO_0000051op some obo:OBIB_0000010c

medical device c # Classes

URI http://purl.obolibrary.org/obo/ERO_0001092
Super-classes obo:OBI_0000968c

Ashkenazi Jewc # Classes

URI http://purl.obolibrary.org/obo/ERO_0001978
Super-classes efo:EFO_0001799c

Sephardic Jewc # Classes

URI http://purl.obolibrary.org/obo/ERO_0001979
Super-classes efo:EFO_0001799c

Africanc # Classes

URI http://purl.obolibrary.org/obo/ERO_0001983
Super-classes efo:EFO_0001799c

mixed ethnicityc # Classes

URI http://purl.obolibrary.org/obo/ERO_0002032
Super-classes efo:EFO_0001799c

family relationshipc # Classes

URI http://purl.obolibrary.org/obo/ERO_0002033
Super-classes obo:BFO_0000020c
Sub-classes obo:ERO_0002063c
obo:ERO_0002037c

biological family relationshipc # Classes

URI http://purl.obolibrary.org/obo/ERO_0002037
Super-classes obo:ERO_0002033c
Sub-classes obo:ERO_0002047c

child relationshipc # Classes

URI http://purl.obolibrary.org/obo/ERO_0002047
Super-classes obo:ERO_0002037c

relationship by marriagec # Classes

URI http://purl.obolibrary.org/obo/ERO_0002063
Super-classes obo:ERO_0002033c

Nordic, Icelandicc # Classes

URI http://purl.obolibrary.org/obo/ERO_0002076
Super-classes efo:EFO_0001799c

Latino, Carribeanc # Classes

URI http://purl.obolibrary.org/obo/ERO_0002087
Super-classes efo:EFO_0003166c

Latino, South Americanc # Classes

URI http://purl.obolibrary.org/obo/ERO_0002090
Super-classes efo:EFO_0003166c

specimen barcodec # Classes

URI http://purl.obolibrary.org/obo/FLU_0001019
Super-classes obo:OMIABIS_0001046c
Sub-classes obo:OBIB_0000255c
obo:OBIB_0000349c
obo:OBIB_0000252c
obo:OBIB_0000263c
obo:OBIB_0000243c

Cortex of left kidneyc # Classes

URI http://purl.obolibrary.org/obo/FMA_15584
Super-classes obo:UBERON_0000064c

Wall of distal part of ileumc # Classes

URI http://purl.obolibrary.org/obo/FMA_17181
Super-classes obo:UBERON_0000064c

Anterior wall of vaginac # Classes

URI http://purl.obolibrary.org/obo/FMA_19972
Super-classes obo:UBERON_0000064c

Posterior wall of vaginac # Classes

URI http://purl.obolibrary.org/obo/FMA_19973
Super-classes obo:UBERON_0000064c

Right tibial nervec # Classes

URI http://purl.obolibrary.org/obo/FMA_22109
Super-classes obo:UBERON_0001323c

Left tibial nervec # Classes

URI http://purl.obolibrary.org/obo/FMA_22110
Super-classes obo:UBERON_0001323c

Cortex of right frontal lobec # Classes

URI http://purl.obolibrary.org/obo/FMA_242207
Super-classes obo:UBERON_0000064c

Right legc # Classes

URI http://purl.obolibrary.org/obo/FMA_24980
Super-classes obo:UBERON_0000465c

Left legc # Classes

URI http://purl.obolibrary.org/obo/FMA_24981
Super-classes obo:UBERON_0000465c

Skin of right legc # Classes

URI http://purl.obolibrary.org/obo/FMA_37829
Super-classes obo:UBERON_0002097c

Skin of left legc # Classes

URI http://purl.obolibrary.org/obo/FMA_37830
Super-classes obo:UBERON_0002097c

Left posterior tibial arteryc # Classes

URI http://purl.obolibrary.org/obo/FMA_43899
Super-classes obo:UBERON_0007610c

Anatomical locationc # Classes

URI http://purl.obolibrary.org/obo/FMA_50707
Super-classes obo:BFO_0000141c
Sub-classes obo:OBIB_0000058c
obo:OBIB_0000059c

Right mammary glandc # Classes

URI http://purl.obolibrary.org/obo/FMA_57987
Super-classes obo:UBERON_0000465c

Mucosa of abdominal part of esophagusc # Classes

URI http://purl.obolibrary.org/obo/FMA_63008
Super-classes obo:UBERON_0002469c

Muscularis mucosae of abdominal part of esophagusc # Classes

URI http://purl.obolibrary.org/obo/FMA_63062
Super-classes obo:UBERON_0004648c

Right hemisphere of cerebellumc # Classes

URI http://purl.obolibrary.org/obo/FMA_83876
Super-classes obo:UBERON_0000064c

geographic locationc # Classes

URI http://purl.obolibrary.org/obo/GAZ_00000448
Super-classes obo:BFO_0000029c

subnational entityc # Classes

URI http://purl.obolibrary.org/obo/GEO_000000004
Super-classes obo:GEO_000000400c
Sub-classes obo:GEO_000000006c

geopolitical dependencyc # Classes

URI http://purl.obolibrary.org/obo/GEO_000000006
Description

Typically, the common feature is that the dependency does not conduct foreign affairs, and relegates this authority to the sovereign state. But otherwise, it is largely or completely autonomous relative to the administrative subdivisions. Examples include Puerto Rico (U.S.), Guam (U.S.), Greenland (Denmark), French Polynesia (France), and Falkland Islands (United Kingdom).

Super-classes obo:GEO_000000004c

geographical entityc # Classes

URI http://purl.obolibrary.org/obo/GEO_000000102
Super-classes obo:BFO_0000030c
Sub-classes obo:GEO_000000151c

geographical regionc # Classes

URI http://purl.obolibrary.org/obo/GEO_000000151
Super-classes obo:GEO_000000102c

sovereign statec # Classes

URI http://purl.obolibrary.org/obo/GEO_000000396
Description
Super-classes obo:GEO_000000400c

governmental organizationc # Classes

URI http://purl.obolibrary.org/obo/GEO_000000400
Description

IMPORTANT: The label "geopolitical organization" was previously used for OMRSE_00000044 (governmental organization). "geopoli organization" is a label for a new and different class.
Super-classes obo:OBI_0000245c
Sub-classes obo:GEO_000000396c
obo:GEO_000000004c

immune responsec # Classes

URI http://purl.obolibrary.org/obo/GO_0006955
Super-classes obo:GO_0008150c

biological_processc # Classes

URI http://purl.obolibrary.org/obo/GO_0008150
Super-classes obo:BFO_0000015c
Sub-classes efo:EFO_0004774c
obo:GO_0006955c
efo:EFO_0004318c

immunoglobulin complexc # Classes

URI http://purl.obolibrary.org/obo/GO_0019814
Super-classes obo:GO_0032991c

protein-containing complexc # Classes

URI http://purl.obolibrary.org/obo/GO_0032991
Super-classes obo:BFO_0000040c
Restrictions obo:BFO_0000051op some obo:PR_000000001c
Sub-classes obo:GO_0019814c

conditional specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000001
Super-classes obo:IAO_0000033c

measurement unit labelc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000003
Super-classes obo:IAO_0000009c
Sub-classes obo:NCIT_C73993c
obo:UO_0000051c
obo:UO_0000003c
obo:UO_0000002c
obo:UO_0000095c
obo:UO_0000005c
obo:UO_0000001c
In range of obo:IAO_0000039op

objective specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000005
Super-classes obo:IAO_0000033c
Sub-classes obo:OBI_0000456c
obo:OMIABIS_0001048c
obo:OBI_0000806c
obo:OBI_0000441c
obo:OBI_0200166c
obo:OMIABIS_0001015c
obo:OBI_0000684c
obo:OMIABIS_0001016c
In domain of obo:OBI_0000833op
In range of obo:OBI_0000417op

action specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000007
Super-classes obo:IAO_0000033c

datum labelc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000009
Super-classes obo:IAO_0000030c
Sub-classes obo:IAO_0000003c

data itemc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000027
Super-classes obo:IAO_0000030c
Sub-classes obo:OBIB_0000249c
obo:IAO_0000102c
obo:OBIB_0000475c
obo:OMIABIS_0001039c
obo:OBIB_0000503c
obo:OBIB_0000153c
obo:OBIB_0000092c
obo:OMIABIS_0001006c
obo:OMIABIS_0000060c
obo:OBIB_0000397c
obo:OMIABIS_0001012c
obo:OBIB_0000398c
obo:OBIB_0000431c
obo:OBIB_0000078c
obo:OBIB_0000399c
obo:OBIB_0000229c
obo:OBIB_0000277c
obo:OBIB_0000096c
obo:OMIABIS_0001004c
obo:OBIB_0000208c
obo:OBIB_0000372c
obo:OBIB_0000201c
obo:OBIB_0000098c
obo:OMIABIS_0001005c
obo:OBIB_0000390c
obo:OGMS_0000073c
obo:OBIB_0000353c
obo:OBIB_0000396c
obo:OBIB_0000088c
obo:OMIABIS_0001007c
obo:OBIB_0000395c
obo:OBIB_0000271c
obo:OBI_0001404c
obo:OBIB_0000207c
obo:OBIB_0000369c
obo:OBIB_0000206c
obo:OBIB_0000504c
obo:OBIB_0000284c
obo:OBIB_0000269c
obo:OBIB_0000370c
obo:OBIB_0000256c
obo:OBIB_0000299c
obo:OBIB_0000346c
obo:OBIB_0000361c
obo:OBIB_0000215c
obo:OBIB_0000388c
obo:IAO_0000100c
obo:OBIB_0000132c
obo:OBIB_0000130c
obo:OBIB_0000268c
obo:OBIB_0000400c
obo:OBIB_0000267c
obo:OBIB_0000394c
obo:OBIB_0000270c
obo:OBIB_0000505c
obo:OBI_0000679c
obo:OBIB_0000279c
obo:OBIB_0000472c
obo:OBIB_0000133c
obo:OBIB_0000367c
obo:OBIB_0000476c
obo:OBIB_0000430c
obo:OBIB_0000265c
obo:OMIABIS_0001049c
obo:OMIABIS_0001050c
obo:OBIB_0000089c
obo:OBIB_0000393c
obo:OMIABIS_00001006c
obo:OBIB_0000436c
obo:OBIB_0000479c
obo:OBIB_0000079c
obo:OBIB_0000082c
obo:OBIB_0000117c
obo:OBIB_0000373c
obo:OBIB_0000409c
obo:OBIB_0000254c
obo:OBIB_0000283c
obo:OBIB_0000379c
obo:OBIB_0000506c
obo:IAO_0000140c
obo:OBIB_0000473c
obo:OBIB_0000382c
obo:OBIB_0000097c
obo:OBIB_0000375c
obo:OBIB_0000359c
obo:OBIB_0000366c
obo:OBIB_0000239c
obo:OBIB_0000276c
obo:OBIB_0000264c
obo:IAO_0000109c
obo:OBIB_0000129c
In range of obo:OBI_0000124op

symbolc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000028
Super-classes obo:IAO_0000030c
Sub-classes obo:IAO_0000577c
obo:IAO_0000029c
obo:IAO_0000132c
obo:IAO_0000129c

numeralc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000029
Super-classes obo:IAO_0000028c

information content entityc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000030
Super-classes obo:BFO_0000031c
Restrictions obo:IAO_0000136op some obo:BFO_0000001c
Sub-classes obo:OBIB_0000302c
obo:OBIB_0000194c
obo:OBIB_0000460c
obo:OBIB_0000325c
obo:OBIB_0000403c
obo:OBIB_0000296c
obo:OBIB_0000433c
obo:IAO_0000009c
obo:OBIB_0000424c
obo:OBI_0001909c
obo:OBIB_0000606c
obo:OBI_0000852c
obo:OBIB_0000442c
obo:OBI_0002199c
obo:OBIB_0000259c
obo:OBI_0002415c
obo:OBIB_0000448c
obo:OBIB_0000224c
obo:OBIB_0000488c
obo:IAO_0000300c
obo:OBI_0001933c
obo:OGMS_0000015c
obo:OBIB_0000247c
obo:IAO_0000027c
obo:OBIB_0000608c
obo:OBIB_0000315c
obo:OBIB_0000569c
obo:OBIB_0000421c
obo:IAO_0020022c
obo:OBIB_0000306c
obo:OMIABIS_0001000c
obo:OBIB_0000446c
obo:OMRSE_00000204c
obo:OBIB_0000615c
obo:IAO_0000310c
obo:OBIB_0000300c
obo:OBIB_0000438c
obo:OBI_0002410c
obo:OBIB_0000281c
obo:OBIB_0000572c
obo:NCIT_C81229c
obo:IAO_0000578c
obo:OBIB_0000148c
obo:IAO_0020000c
obo:IAO_0000429c
obo:OBIB_0000415c
obo:OBIB_0000607c
obo:OBIB_0000411c
obo:OBIB_0000324c
obo:OBI_0002617c
obo:OBIB_0000444c
obo:IAO_0000308c
obo:OBIB_0000449c
obo:OBIB_0000099c
obo:OBIB_0000443c
obo:OBIB_0000614c
obo:OBIB_0000445c
obo:OBIB_0000432c
obo:OBI_0002421c
obo:OBIB_0000294c
obo:OBIB_0000613c
obo:IAO_0000028c
obo:NCIT_C29719c
obo:OBIB_0000486c
obo:OBIB_0000451c
obo:OBIB_0000435c
obo:OBIB_0000609c
obo:OBIB_0000402c
obo:OBIB_0000612c
obo:OBIB_0000440c
obo:OBIB_0000611c
obo:OBIB_0000327c
obo:OBIB_0000604c
obo:OBIB_0000298c
obo:OBIB_0000610c
obo:OBIB_0000172c
obo:OBIB_0000292c
obo:OBIB_0000447c
obo:OBIB_0000426c
obo:OBIB_0000261c
obo:OBIB_0000330c
obo:OBIB_0000289c
obo:OBIB_0000605c
obo:OBIB_0000570c
obo:OBIB_0000571c
obo:IAO_0000033c
obo:OBIB_0000280c
obo:OBIB_0000304c
obo:OBIB_0000406c
obo:OBI_0002401c
obo:OBIB_0000428c
obo:OBIB_0000223c
obo:OBI_0002422c
obo:OBIB_0000450c
In domain of obo:IAO_0000136op
obo:OMIABIS_0000042op
obo:IAO_0000219op
obo:OBI_0001938op
obo:IAO_0020012op
In range of obo:IAO_0000235op

scalar measurement datumc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000032
Super-classes obo:IAO_0000109c
Restrictions obo:IAO_0000004fp min 1
obo:IAO_0000039op min 1
obo:OBI_0001938op some obo:OBI_0001931c
Sub-classes obo:IAO_0000416c
obo:OBIB_0000236c
obo:OBIB_0000241c
obo:OBIB_0000307c
obo:OBIB_0000310c
obo:IAO_0000408c
obo:OBIB_0000262c
obo:OBIB_0000417c
obo:OBIB_0000297c
obo:OBIB_0000278c
obo:OBIB_0000326c
obo:OBIB_0000253c
obo:OBIB_0000312c
obo:IAO_0000414c
obo:OBIB_0000336c
obo:OBIB_0000303c
In domain of obo:IAO_0000004fp

directive information entityc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000033
Super-classes obo:IAO_0000030c
Restrictions obo:IAO_0000136op some obo:BFO_0000017c
Sub-classes obo:OBI_0001755c
obo:IAO_0000001c
obo:IAO_0000005c
obo:IAO_0000104c
obo:IAO_0000007c

algorithmc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000064
Super-classes obo:IAO_0000104c

curation status specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000078
Super-classes obo:IAO_0000102c
Members obo:IAO_0000428
obo:IAO_0000423
obo:IAO_0000123
obo:IAO_0000121
obo:IAO_0000120
obo:IAO_0000002
obo:IAO_0000125
obo:IAO_0000122
obo:IAO_0000124

data setc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000100
Super-classes obo:IAO_0000027c
Sub-classes obo:OMIABIS_0001002c
obo:IAO_0000579c
obo:APOLLO_SV_00000085c

imagec # Classes

URI http://purl.obolibrary.org/obo/IAO_0000101
Super-classes obo:IAO_0000308c

data about an ontology partc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000102
Super-classes obo:IAO_0000027c
Sub-classes obo:IAO_0000078c
obo:IAO_0000409c
obo:IAO_8000000c
obo:IAO_0000225c

plan specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000104
Description

2/3/2009 Comment from OBI review.

Action specification not well enough specified. Conditional specification not well enough specified. Question whether all plan specifications have objective specifications.

Request that IAO either clarify these or change definitions not to use them
Super-classes obo:IAO_0000033c
Restrictions obo:BFO_0000051op some obo:IAO_0000007c
obo:BFO_0000051op some obo:IAO_0000005c
Sub-classes obo:IAO_0000064c
obo:OBI_0000272c
obo:OMIABIS_0001025c
obo:NCIT_C106501c
obo:OBI_0500000c

measurement datumc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000109
Super-classes obo:IAO_0000027c
Restrictions obo:OBI_0001938op some obo:OBI_0001933c
Sub-classes obo:IAO_0000582c
obo:APOLLO_SV_00000032c
obo:OBIB_0000142c
obo:OMIABIS_0001038c
obo:OBI_0002395c
obo:OBIB_0000418c
obo:OBIB_0000138c
obo:OBIB_0000149c
obo:OBIB_0000140c
obo:IAO_0000032c
obo:OBI_0002394c
obo:OBIB_0000137c
obo:OBIB_0000145c
obo:OBIB_0000242c
In domain of obo:IAO_0000221op
In range of obo:OBIB_0000037op
obo:OBIB_0000038op

version numberc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000129
Super-classes obo:IAO_0000028c

lot numberc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000132
Super-classes obo:IAO_0000028c

setting datumc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000140
Super-classes obo:IAO_0000027c
Sub-classes obo:OMIABIS_0001013c

conclusion textual entityc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000144
Super-classes obo:IAO_0000300c
obo:OBI_0001909c
Restrictions obo:OBI_0000124op some obo:IAO_0000027c
obo:OBI_0000312op some obo:OBI_0000338c
Sub-classes obo:OBI_0002013c

material information bearerc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000178
Super-classes obo:BFO_0000040c

obsolescence reason specificationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000225
Super-classes obo:IAO_0000102c
Members obo:IAO_0000103
obo:IAO_0000229
obo:IAO_0000226
obo:IAO_0000227
obo:IAO_0000228

textual entityc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000300
Super-classes obo:IAO_0000030c
Sub-classes obo:IAO_0000422c
obo:OBIB_0000416c
obo:OMIABIS_0000029c
obo:OBIB_0000203c
obo:OBIB_0000351c
obo:OBIB_0000308c
obo:OBIB_0000429c
obo:OBIB_0000386c
obo:OBIB_0000352c
obo:OBIB_0000316c
obo:OBIB_0000434c
obo:OBIB_0000425c
obo:OBIB_0000531c
obo:OMIABIS_0000031c
obo:OBIB_0000348c
obo:OBIB_0000238c
obo:OBIB_0000317c
obo:OBIB_0000333c
obo:OMIABIS_0001037c
obo:OBIB_0000412c
obo:OBIB_0000260c
obo:OBIB_0000487c
obo:OBIB_0000404c
obo:OBIB_0000441c
obo:OBIB_0000329c
obo:OBIB_0000354c
obo:OBIB_0000407c
obo:OBIB_0000532c
obo:OBIB_0000405c
obo:OBIB_0000332c
obo:OBIB_0000401c
obo:OBIB_0000520c
obo:OBIB_0000323c
obo:OBIB_0000074c
obo:OMIABIS_0000036c
obo:OMIABIS_0000021c
obo:IAO_0000305c
obo:OBIB_0000282c
obo:OBIB_0000290c
obo:OBIB_0000528c
obo:OBIB_0000248c
obo:OBIB_0000000c
obo:OBIB_0000345c
obo:OBIB_0000422c
obo:IAO_0000144c

document titlec # Classes

URI http://purl.obolibrary.org/obo/IAO_0000305
Super-classes obo:IAO_0000300c
Sub-classes obo:IAO_0000329c

figurec # Classes

URI http://purl.obolibrary.org/obo/IAO_0000308
Super-classes obo:IAO_0000030c
Sub-classes obo:IAO_0000101c

documentc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000310
Super-classes obo:IAO_0000030c
Sub-classes obo:OBI_0002616c
obo:OMIABIS_0001026c
obo:OBI_0302874c
obo:OMIABIS_0001028c
obo:OBI_0001000c
obo:ICO_0000075c
obo:IAO_0020021c
obo:ICO_0000001c

running titlec # Classes

URI http://purl.obolibrary.org/obo/IAO_0000329
Super-classes obo:IAO_0000305c

length measurement datumc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000408
Super-classes obo:IAO_0000032c
Restrictions obo:IAO_0000039op some obo:UO_0000001c
obo:IAO_0000221op some obo:PATO_0000122c
Sub-classes obo:OBI_0002197c
obo:OBIB_0000392c

denotator typec # Classes

URI http://purl.obolibrary.org/obo/IAO_0000409
Super-classes obo:IAO_0000102c
Members obo:IAO_0000421
obo:IAO_0000420
obo:IAO_0000410

mass measurement datumc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000414
Super-classes obo:IAO_0000032c
(ub385bL2764C29c and ub385bL2769C13c)
Sub-classes obo:OBI_0002002c
obo:OBIB_0000420c
obo:OBIB_0000362c

time measurement datumc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000416
Super-classes obo:IAO_0000032c
(ub385bL2786C29c and ub385bL2791C13c)
Sub-classes obo:OBIB_0000499c
obo:OBIB_0000053c
obo:OBIB_0000500c
obo:OBIB_0000368c
obo:OBIB_0000502c
efo:EFO_0004953c
obo:OBI_0001167c
obo:OBIB_0000501c
obo:OMIABIS_0001043c
obo:OBIB_0000093c
obo:OBI_0001619c
obo:OBIB_0000301c
obo:OBIB_0000051c
obo:OBIB_0000313c
obo:OBIB_0000335c
obo:OBIB_0000530c
obo:OBIB_0000526c
obo:OBIB_0000054c
obo:OBIB_0000131c
obo:OBIB_0000295c
obo:OBIB_0000527c
obo:OBIB_0000060c
obo:OBIB_0000150c
obo:OBIB_0000374c
obo:OBIB_0000293c
obo:OBIB_0000529c
efo:EFO_0004950c
obo:OBIB_0000511c
In domain of obo:IAO_0000413op
In range of obo:IAO_0000581op

postal addressc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000422
Super-classes obo:IAO_0000300c
Restrictions obo:IAO_0000136op some obo:GAZ_00000448c
Sub-classes obo:OMIABIS_0000016c

email addressc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000429
Super-classes obo:IAO_0000030c
Sub-classes obo:OMIABIS_0000015c
obo:OMIABIS_0000035c

documentingc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000572
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000293op some obo:IAO_0000030c
obo:OBI_0000299op some obo:IAO_0000310c
Sub-classes obo:OBI_0302914c

centrally registered identifier symbolc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000577
Super-classes obo:IAO_0000028c
Restrictions obo:BFO_0000050op some obo:IAO_0000578c
Sub-classes obo:OBI_0002191c
obo:OBIB_0000474c

centrally registered identifierc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000578
Super-classes obo:IAO_0000030c
Restrictions obo:BFO_0000051op some ()
obo:BFO_0000051op some obo:IAO_0000577c
Sub-classes obo:OMIABIS_0000019c

centrally registered identifier registryc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000579
Super-classes obo:IAO_0000100c

time stamped measurement datumc # Classes

URI http://purl.obolibrary.org/obo/IAO_0000582
Super-classes obo:IAO_0000109c
(ub385bL2957C29c and ub385bL2962C13c)
Sub-classes obo:OBIB_0000135c
obo:OBIB_0000134c
In domain of obo:IAO_0000583op
obo:IAO_0000581op

postal codec # Classes

URI http://purl.obolibrary.org/obo/IAO_0000646
Super-classes obo:IAO_0020000c
Sub-classes obo:OMIABIS_0000044c
obo:OMIABIS_0000027c

identifierc # Classes

URI http://purl.obolibrary.org/obo/IAO_0020000
Description

Sep 29, 2016: The current definition has been amended from the previous version: "A proper name is an information content entity that is the outcome of a dubbing process and is used to refer to one instance of entity shared by a group of people to refer to that individual entity." to more accuratly reflect the necessary and sufficient condition on the class. (MB)
Super-classes obo:IAO_0000030c
Sub-classes obo:OBIB_0000250c
obo:OBI_0002003c
obo:OBIB_0000001c
obo:OMIABIS_0000037c
obo:OBIB_0000360c
obo:OMIABIS_0001046c
obo:OBIB_0000385c
obo:IAO_0020015c
obo:OBIB_0000480c
obo:OBIB_0000068c
obo:OMIABIS_0000023c
obo:OMIABIS_0000046c
obo:APOLLO_SV_00000496c
obo:OMIABIS_0000003c
obo:IAO_0000646c
obo:OMIABIS_0000004c
obo:OMIABIS_0001047c

dubbing processc # Classes

URI http://purl.obolibrary.org/obo/IAO_0020010
Super-classes obo:OBI_0000011c

personal namec # Classes

URI http://purl.obolibrary.org/obo/IAO_0020015
Description

Personal names "today usually comprises a given name bestowed at birth or at a young age plus a surname. It is nearly universal for a human to have a name; except in rare cases, for example feral children growing up in isolation, or infants orphaned by natural disaster for whom no written record survives.[citation needed] The Convention on the Rights of the Child specifies that a child has the right from birth to a name. Certain isolated tribes, such as the Machiguenga of the Amazon, also lack personal names." (http://en.wikipedia.org/wiki/Personal_name)
Super-classes obo:IAO_0020000c
Sub-classes obo:OBIB_0000419c
obo:OBIB_0000275c
obo:OBIB_0000285c
obo:OMIABIS_0000038c
obo:OBIB_0000286c
obo:OBIB_0000318c
obo:OBIB_0000387c
obo:OMIABIS_0001042c
obo:OBIB_0000389c
obo:OBIB_0000202c
obo:IAO_0020016c
obo:OMIABIS_0000039c
obo:OBIB_0000266c
obo:OBIB_0000478c
obo:OBIB_0000246c
obo:OBIB_0000287c
obo:OBIB_0000274c
obo:OBIB_0000258c
obo:OBIB_0000477c
obo:OBIB_0000380c
obo:IAO_0020017c
obo:OBIB_0000240c
obo:OBIB_0000410c
obo:OBIB_0000232c
obo:OBIB_0000408c
obo:OBIB_0000413c
obo:OBIB_0000205c
obo:OMIABIS_0000014c
obo:OBIB_0000257c

given namec # Classes

URI http://purl.obolibrary.org/obo/IAO_0020016
Super-classes obo:IAO_0020015c

family namec # Classes

URI http://purl.obolibrary.org/obo/IAO_0020017
Super-classes obo:IAO_0020015c

identity documentc # Classes

URI http://purl.obolibrary.org/obo/IAO_0020021
Super-classes obo:IAO_0000310c

documented identityc # Classes

URI http://purl.obolibrary.org/obo/IAO_0020022
Description

is an aggregate of ICEs also an ICE? yes Is part_of the appropriate relation to use for data items and documented identities?
Super-classes obo:IAO_0000030c
(ub385bL3190C29c and ub385bL3195C13c and ub385bL3202C13c)

authenticationc # Classes

URI http://purl.obolibrary.org/obo/IAO_0020023
Super-classes (obo:BFO_0000015c and ub385bL3222C13c and ub385bL3227C13c and ub385bL3232C13c)
obo:BFO_0000015c

credential rolec # Classes

URI http://purl.obolibrary.org/obo/IAO_0020024
Super-classes obo:BFO_0000023c

ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000000
Super-classes obo:IAO_0000102c
Sub-classes obo:IAO_8000001c
obo:IAO_8000003c
obo:IAO_8000014c
obo:IAO_8000006c
obo:IAO_8000004c
obo:IAO_8000013c
obo:IAO_8000002c

base ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000001
Super-classes obo:IAO_8000000c

editors ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000002
Super-classes obo:IAO_8000000c

main release ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000003
Super-classes obo:IAO_8000000c

bridge ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000004
Super-classes obo:IAO_8000000c
Sub-classes obo:IAO_8000016c

import ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000005
Super-classes obo:IAO_8000006c
Sub-classes obo:IAO_8000011c

subset ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000006
Super-classes obo:IAO_8000000c
Sub-classes obo:IAO_8000012c
obo:IAO_8000017c
obo:IAO_8000010c
obo:IAO_8000005c
obo:IAO_8000009c
obo:IAO_8000008c
obo:IAO_8000007c

curation subset ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000007
Super-classes obo:IAO_8000006c

analysis subset ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000008
Super-classes obo:IAO_8000006c

single layer subset ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000009
Super-classes obo:IAO_8000006c

exclusion subset ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000010
Super-classes obo:IAO_8000006c

external import ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000011
Super-classes obo:IAO_8000005c

species subset ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000012
Super-classes obo:IAO_8000006c

reasoned ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000013
Super-classes obo:IAO_8000000c

generated ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000014
Super-classes obo:IAO_8000000c
Sub-classes obo:IAO_8000015c

template generated ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000015
Super-classes obo:IAO_8000014c

taxonomic bridge ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000016
Super-classes obo:IAO_8000004c

ontology module subsetted by expressivityc # Classes

URI http://purl.obolibrary.org/obo/IAO_8000017
Super-classes obo:IAO_8000006c
Sub-classes obo:IAO_8000019c
obo:IAO_8000018c

obo basic subset ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000018
Super-classes obo:IAO_8000017c

ontology module subsetted by OWL profilec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000019
Super-classes obo:IAO_8000017c
Sub-classes obo:IAO_8000020c

EL++ ontology modulec # Classes

URI http://purl.obolibrary.org/obo/IAO_8000020
Super-classes obo:IAO_8000019c

informed consent formc # Classes

URI http://purl.obolibrary.org/obo/ICO_0000001
Super-classes obo:IAO_0000310c
Sub-classes obo:ICO_0000023c
obo:ICO_0000024c

completely filled informed consent formc # Classes

URI http://purl.obolibrary.org/obo/ICO_0000023
Super-classes obo:ICO_0000001c
Restrictions obo:OBI_0000312op some (obo:OBIB_0000018c and ub385bL3487C17c and ub385bL3492C17c and ub385bL3506C17c)

partially filled informed consent formc # Classes

URI http://purl.obolibrary.org/obo/ICO_0000024
Super-classes obo:ICO_0000001c
Restrictions obo:OBI_0000312op some (obo:OBIB_0000018c and ub385bL3536C17c and ub385bL3541C17c and ub385bL3555C17c)

act of authorizingc # Classes

URI http://purl.obolibrary.org/obo/ICO_0000046
Super-classes obo:OBI_0000011c
Sub-classes obo:OBIB_0000457c

obsolete authorization documentc # Classes

URI http://purl.obolibrary.org/obo/ICO_0000075
Super-classes obo:IAO_0000310c
Sub-classes obo:OBIB_0000490c
obo:OBIB_0000489c
obo:OBIB_0000459c

eligibility of candidate participationc # Classes

URI http://purl.obolibrary.org/obo/ICO_0000146
Super-classes obo:BFO_0000017c
Sub-classes obo:ICO_0000148c
obo:ICO_0000147c

candidate eligible for study rolec # Classes

URI http://purl.obolibrary.org/obo/ICO_0000147
Super-classes obo:ICO_0000146c

candidate ineligible for study rolec # Classes

URI http://purl.obolibrary.org/obo/ICO_0000148
Super-classes obo:ICO_0000146c

pathogenic dispositionc # Classes

URI http://purl.obolibrary.org/obo/IDO_0000450
Description

The use of 'initiates' is intended to convey that a pathogenic disposition is realized when processes resulting in a disorder begin because of some action on the part of the bearer of the disposition. By this interpretation of 'initiates', disorder-causing entities such as glass, UV light, and toxins do not have a pathogenic disposition.
Super-classes obo:BFO_0000016c
(ub385bL3625C29c and ub385bL3630C13c)

immunosuppressed organismc # Classes

URI http://purl.obolibrary.org/obo/IDO_0000456
Super-classes obo:OBI_0100026c
Sub-classes obo:IDO_0001014c
obo:IDO_0001013c
obo:IDO_0001008c

pathogenc # Classes

URI http://purl.obolibrary.org/obo/IDO_0000528
Super-classes obo:BFO_0000040c

immunosuppressionc # Classes

URI http://purl.obolibrary.org/obo/IDO_0000610
Super-classes obo:BFO_0000015c
Sub-classes obo:IDO_0000644c
obo:IDO_0000612c

pathologic immunosuppressionc # Classes

URI http://purl.obolibrary.org/obo/IDO_0000612
Super-classes obo:IDO_0000610c

immunosuppressive dispositionc # Classes

URI http://purl.obolibrary.org/obo/IDO_0000619
Super-classes obo:BFO_0000016c

pregnancy-induced immunosuppressionc # Classes

URI http://purl.obolibrary.org/obo/IDO_0000644
Super-classes obo:IDO_0000610c

immunosuppressed human experiencing HIV-based immunosuppressionc # Classes

URI http://purl.obolibrary.org/obo/IDO_0001008
Super-classes obo:IDO_0000456c

immunosuppressed human experiencing chronic systemic steroid use-based immunosuppressionc # Classes

URI http://purl.obolibrary.org/obo/IDO_0001013
Super-classes obo:IDO_0000456c

immunosuppressed human experiencing drug-based immunosuppression due to organ transplantc # Classes

URI http://purl.obolibrary.org/obo/IDO_0001014
Super-classes obo:IDO_0000456c

Virusesc # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_10239
Super-classes obo:OBI_0100026c
Sub-classes obo:NCBITaxon_10407c
obo:NCBITaxon_11103c
obo:NCBITaxon_11646c
obo:NCBITaxon_10292c

Herpesviridaec # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_10292
Super-classes obo:NCBITaxon_10239c
Sub-classes obo:NCBITaxon_10358c
obo:NCBITaxon_10376c

Cytomegalovirusc # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_10358
Super-classes obo:NCBITaxon_10292c

Human gammaherpesvirus 4c # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_10376
Super-classes obo:NCBITaxon_10292c

Hepatitis B virusc # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_10407
Super-classes obo:NCBITaxon_10239c

Hepacivirus Cc # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_11103
Super-classes obo:NCBITaxon_10239c

Lentivirusc # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_11646
Super-classes obo:NCBITaxon_10239c
Sub-classes obo:NCBITaxon_11709c
obo:NCBITaxon_11676c

Human immunodeficiency virus 1c # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_11676
Super-classes obo:NCBITaxon_11646c
Sub-classes obo:NCBITaxon_388799c

Human immunodeficiency virus 2c # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_11709
Super-classes obo:NCBITaxon_11646c

Euteleostomic # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_117571
Super-classes obo:NCBITaxon_7742c
Sub-classes obo:NCBITaxon_32523c

Bacteriac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_2
Super-classes obo:OBI_0100026c

Archaeac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_2157
Super-classes obo:OBI_0100026c

Eukaryotac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_2759
Super-classes obo:OBI_0100026c
Sub-classes obo:OBIB_0000056c
obo:NCBITaxon_33154c

Euarchontogliresc # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_314146
Super-classes obo:NCBITaxon_40674c
Sub-classes obo:NCBITaxon_9606c

Tetrapodac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_32523
Super-classes obo:NCBITaxon_117571c
Sub-classes obo:NCBITaxon_32524c

Amniotac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_32524
Super-classes obo:NCBITaxon_32523c
Sub-classes obo:NCBITaxon_40674c

Opisthokontac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_33154
Super-classes obo:NCBITaxon_2759c
Sub-classes obo:NCBITaxon_33213c

Bilateriac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_33213
Super-classes obo:NCBITaxon_33154c
Sub-classes obo:NCBITaxon_7742c

HIV-1 group Oc # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_388799
Super-classes obo:NCBITaxon_11676c

Mammaliac # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_40674
Super-classes obo:NCBITaxon_32524c
Sub-classes obo:NCBITaxon_314146c

Vertebrata c # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_7742
Super-classes obo:NCBITaxon_33213c
Sub-classes obo:NCBITaxon_117571c

Homo sapiensc # Classes

URI http://purl.obolibrary.org/obo/NCBITaxon_9606
Super-classes obo:NCBITaxon_314146c
Sub-classes obo:OMIABIS_0000099c
obo:OMIABIS_0001079c
obo:OMIABIS_0000013c

Birth Control Methodc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C106501
Super-classes obo:IAO_0000104c
Sub-classes obo:OBIB_0000524c
obo:OBIB_0000523c
obo:OBIB_0000521c
obo:OBIB_0000522c
obo:OBIB_0000525c

Tubulocystic Renal Cell Carcinomac # Classes

URI http://purl.obolibrary.org/obo/NCIT_C126303
Super-classes obo:DOID_4451c

Central Africanc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C126528
Super-classes obo:OBI_0000181c

North Africanc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C126529
Super-classes obo:OBI_0000181c

South Africanc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C126530
Super-classes obo:OBI_0000181c

Southeast Asianc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C126533
Super-classes obo:OBI_0000181c

Central Asianc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C126534
Super-classes obo:OBI_0000181c

Australianc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C126535
Super-classes obo:OBI_0000181c

New Zealanderc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C126536
Super-classes obo:OBI_0000181c

Scandinavianc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C126538
Super-classes obo:OBI_0000181c

Australian/New Zealand Ethnicityc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C128458
Super-classes efo:EFO_0001799c

Prior Radiation Therapyc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C15477
Super-classes obo:OGMS_0000090c

Adjuvant Therapyc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C15675
Super-classes obo:NCIT_C16212c

Prior Immunotherapyc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C16168
Super-classes obo:OGMS_0000090c

Prior Chemotherapyc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C16171
Super-classes obo:OGMS_0000090c

Prior Hormone Therapyc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C16175
Super-classes obo:OGMS_0000090c

Cancer Therapeutic Procedurec # Classes

URI http://purl.obolibrary.org/obo/NCIT_C16212
Super-classes obo:OGMS_0000090c
Sub-classes obo:NCIT_C15675c
obo:OBI_0002004c

Renal Cell Carcinoma Associated with Xp11.2 Translocations/TFE3 Gene Fusionsc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C27891
Super-classes obo:DOID_4451c

Tobacco Smoking Historyc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C29719
Super-classes obo:IAO_0000030c
Sub-classes obo:OBIB_0000512c
obo:OBIB_0000514c
obo:OBIB_0000515c
obo:OBIB_0000513c

Borderline Ovarian Mucinous Tumor, Intestinal Typec # Classes

URI http://purl.obolibrary.org/obo/NCIT_C40037
Super-classes obo:DOID_6067c

Borderline Ovarian Mucinous Tumor, Endocervical-Likec # Classes

URI http://purl.obolibrary.org/obo/NCIT_C40038
Super-classes obo:DOID_6067c

Borderline Ovarian Clear Cell Tumorc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C40080
Super-classes obo:DOID_0050934c

Borderline Ovarian Transitional Cell Tumorc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C40088
Super-classes obo:DOID_4000c

South Asianc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C41263
Super-classes obo:OBI_0000181c

Europeanc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C43851
Super-classes obo:OBI_0000181c
Sub-classes obo:NCIT_C77817c
obo:NCIT_C77819c

Ovarian Undifferentiated Carcinomac # Classes

URI http://purl.obolibrary.org/obo/NCIT_C4509
Super-classes obo:DOID_2394c

Lung Squamous Cell Carcinoma, Papillary Variantc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C45502
Super-classes obo:DOID_3907c

Lung Squamous Cell Carcinoma, Clear Cell Variantc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C45503
Super-classes obo:DOID_3907c

Lung Squamous Cell Carcinoma, Small Cell Variantc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C45504
Super-classes obo:DOID_3907c

Lung Colloid Adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/NCIT_C45512
Super-classes obo:DOID_3910c

Lung Signet Ring Cell Carcinomac # Classes

URI http://purl.obolibrary.org/obo/NCIT_C45514
Super-classes obo:DOID_3910c

Borderline Ovarian Serous Tumorc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C5226
Super-classes obo:DOID_0050933c

Solid Lung Adenocarcinomac # Classes

URI http://purl.obolibrary.org/obo/NCIT_C5651
Super-classes obo:DOID_3910c

Colon Undifferentiated Carcinomac # Classes

URI http://purl.obolibrary.org/obo/NCIT_C7100
Super-classes obo:DOID_1520c

Borderline Ovarian Seromucinous Tumor/Atypical Proliferative Ovarian Seromucinous Tumorc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C7281
Super-classes obo:DOID_2152c

Pack Yearc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C73993
Super-classes obo:IAO_0000003c

Mediterraneanc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C77811
Super-classes obo:OBI_0000181c

Western Europeanc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C77817
Super-classes obo:NCIT_C43851c

Eastern Europeanc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C77819
Super-classes obo:NCIT_C43851c

Middle Easternc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C77820
Super-classes obo:OBI_0000181c

Borderline Ovarian Endometrioid Tumor/Atypical Proliferative Ovarian Endometrioid Tumorc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C7983
Super-classes obo:DOID_5828c

Alcohol Use Historyc # Classes

URI http://purl.obolibrary.org/obo/NCIT_C81229
Super-classes obo:IAO_0000030c
Sub-classes obo:OBIB_0000508c
obo:OBIB_0000510c
obo:OBIB_0000507c
obo:OBIB_0000509c

colectomyc # Classes

URI http://purl.obolibrary.org/obo/OAE_0001159
Super-classes obo:OMIABIS_0001041c
Sub-classes obo:OBIB_0000121c
obo:OBIB_0000119c
obo:OBIB_0000120c
obo:OBIB_0000124c
obo:OBIB_0000127c
obo:OBIB_0000123c
obo:OBIB_0000122c
obo:OBIB_0000128c

biobank description in englishc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000000
Super-classes obo:IAO_0000300c
Restrictions obo:IAO_0000136op some obo:OMIABIS_0000000c

sample collection identifierc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000001
Super-classes obo:IAO_0020000c
Sub-classes obo:OMIABIS_0000034c

freezer shelfc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000010
Super-classes obo:OBI_0000968c
Restrictions obo:RO_0000085op some obo:OBI_0000399c

discardingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000011
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000299op some (obo:BFO_0000040c and ub385bL4337C17c)
obo:OBI_0000293op some obo:BFO_0000040c

human subject recuiter rolec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000012
Super-classes obo:OBI_0000116c

cryovial boxc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000013
Super-classes obo:OBI_0000967c
Restrictions obo:RO_0000085op some obo:OBI_0000370c

trash containerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000014
Super-classes obo:OBI_0000967c
Restrictions obo:RO_0000085op some obo:OBI_0000370c

freezer rackc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000015
Super-classes obo:OBI_0000968c
Restrictions obo:RO_0000085op some obo:OBI_0000399c

blood spot card boxc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000016
Super-classes obo:OBI_0000967c
Restrictions obo:RO_0000085op some obo:OBI_0000370c

data confirm questionnairec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000017
Super-classes obo:OBI_0001000c
Sub-classes obo:OBIB_0000027c

form fillingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000018
Super-classes obo:OBI_0302908c

filled patient questionnairec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000019
Super-classes obo:OBIB_0000020c
Restrictions obo:OBI_0000312op some (obo:OBIB_0000018c and ub385bL4430C17c and ub385bL4435C17c)

patient questionnairec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000020
Super-classes obo:OBI_0001000c
Sub-classes obo:OBIB_0000019c

collection packet with specimen and information materialc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000021
Super-classes obo:OBIB_0000024c
Restrictions obo:BFO_0000051op some (obo:BFO_0000040c and ub385bL4473C17c)

blood additive rolec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000022
Super-classes obo:OBI_0000319c

lab technician rolec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000023
Super-classes obo:OBI_0000116c

collection packet with specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000024
Super-classes obo:OBIB_0000028c
Restrictions obo:BFO_0000051op some (obo:OBI_0100051c and ub385bL4523C17c)
Sub-classes obo:OBIB_0000021c

collection packet with empty containerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000025
Super-classes obo:OBIB_0000028c
Restrictions http://purl.obolibrary.org/obo/cl#lacks_partop some obo:IAO_0000178c
http://purl.obolibrary.org/obo/cl#lacks_partop some obo:OBI_0100051c

medication rolec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000026
Super-classes obo:BFO_0000023c
Sub-classes obo:CHEBI_65265c
obo:CHEBI_51371c
obo:CHEBI_33281c
obo:CHEBI_35717c
obo:CHEBI_35482c
obo:CHEBI_38867c
obo:CHEBI_50919c

filled data confirm questionnairec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000027
Super-classes obo:OBIB_0000017c
Restrictions obo:OBI_0000312op some (obo:OBIB_0000018c and ub385bL4568C17c and ub385bL4573C17c)

collection packetc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000028
Super-classes obo:BFO_0000040c
Restrictions obo:BFO_0000051op some obo:OBI_0000967c
Sub-classes obo:OBIB_0000040c
obo:OBIB_0000025c
obo:OBIB_0000024c

medication materialc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000029
Super-classes obo:BFO_0000040c

blood spot cardc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000030
Super-classes obo:OBI_0000967c
Restrictions obo:RO_0000085op some obo:OBI_0000370c
obo:RO_0000085op some obo:OBI_0000399c

cryovialc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000031
Super-classes obo:OBI_0000967c

vacutainerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000032
Super-classes obo:OBI_0000967c

specimen receivingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000033
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000299op some (obo:OBIB_0000028c and ub385bL4665C17c)

adding specimen into a containerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000034
Super-classes obo:OBI_0000274c
Restrictions obo:OBI_0000299op some (obo:OBI_0100051c and ub385bL4686C17c and ub385bL4691C17c)
Sub-classes obo:OBIB_0000035c

blood spottingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000035
Super-classes obo:OBIB_0000034c
Restrictions obo:RO_0000057op some obo:OBIB_0000030c
obo:OBI_0000293op some obo:OBI_0000655c

buffy coat specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000036
Super-classes obo:OBI_0000953c
Restrictions obo:OBI_0000312op some (obo:OBI_0302886c and ub385bL4737C17c)

blood specimen on blood spot cardc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000039
Description

A specimen that located in a blood spot card via blood spotting process.
Super-classes obo:OBI_0000953c
obo:OBI_0000655c
Restrictions obo:RO_0001025op some obo:OBIB_0000030c
obo:OBI_0000312op some obo:OBIB_0000035c

collection packet with empty container and unfilled information materialc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000040
Super-classes obo:OBIB_0000028c
Restrictions obo:BFO_0000051op some (obo:BFO_0000040c and ub385bL4793C17c)
http://purl.obolibrary.org/obo/cl#lacks_partop some obo:OBI_0100051c

duration time of smoking regularlyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000041
Super-classes obo:OBIB_0000053c

average daily use of cigarette datumc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000042
Super-classes obo:OBI_0000679c
Restrictions obo:OBI_0000312op some obo:OBI_0200170c

nicotine patchc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000043
Super-classes obo:OBIB_0000048c
Restrictions obo:BFO_0000051op some obo:CHEBI_18723c

cigarettec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000044
Super-classes obo:OBIB_0000057c
obo:OBIB_0000048c
Restrictions obo:RO_0001000op some obo:OBIB_0000056c
obo:BFO_0000051op some obo:CHEBI_18723c

nicotine gum or lozengec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000045
Super-classes obo:OBIB_0000048c
Restrictions obo:BFO_0000051op some obo:CHEBI_18723c

cigarc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000046
Super-classes obo:OBIB_0000057c
obo:OBIB_0000048c
Restrictions obo:BFO_0000051op some obo:CHEBI_18723c
obo:RO_0001000op some obo:OBIB_0000056c

chewing tobaccoc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000047
Super-classes obo:OBIB_0000057c
Restrictions obo:RO_0001000op some obo:OBIB_0000056c

nicotine materialc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000048
Super-classes obo:OBI_0000047c
Sub-classes obo:OBIB_0000045c
obo:OBIB_0000050c
obo:OBIB_0000043c
obo:OBIB_0000044c
obo:OBIB_0000046c

smoking pipec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000049
Super-classes obo:OBI_0000967c
Restrictions obo:RO_0000085op some obo:OBI_0000370c

nicotine e-cigarettec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000050
Super-classes obo:OBIB_0000048c
Restrictions obo:BFO_0000051op some obo:CHEBI_18723c

smoking start datec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000051
Super-classes obo:IAO_0000416c
Restrictions obo:IAO_0000136op some efo:EFO_0004318c

pipe smoking behaviorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000052
Super-classes efo:EFO_0004318c
Restrictions obo:OBI_0000293op some obo:OBIB_0000055c
obo:RO_0000057op some obo:OBIB_0000049c

duration time of smokingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000053
Super-classes obo:IAO_0000416c
Restrictions obo:IAO_0000413op some efo:EFO_0004318c
Sub-classes obo:OBIB_0000041c

smoking end datec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000054
Super-classes obo:IAO_0000416c
Restrictions obo:IAO_0000136op some efo:EFO_0004318c

pipe tobaccoc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000055
Super-classes obo:OBIB_0000057c
Restrictions obo:RO_0001000op some obo:OBIB_0000056c

tobaccoc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000056
Super-classes obo:NCBITaxon_2759c

tobacco materialc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000057
Super-classes obo:OBI_0000047c
Sub-classes obo:OBIB_0000047c
obo:OBIB_0000044c
obo:OBIB_0000046c
obo:OBIB_0000055c

Location below resectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000058
Super-classes obo:FMA_50707c

Location adjacent to tissue fixationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000059
Super-classes obo:FMA_50707c

time in fixative measurementc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000060
Super-classes obo:IAO_0000416c
Sub-classes obo:OBIB_0000371c

postmortem collecting specimen from organismc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000061
Super-classes obo:OBI_0600005c

collecting specimen from organism during organ donationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000062
Super-classes obo:OBI_0600005c

internal body temperature measurement assayc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000063
Super-classes obo:OBI_0002140c
Sub-classes obo:OBIB_0000065c
obo:OBIB_0000067c
obo:OBIB_0000066c

rectal temperature measurement assayc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000065
Super-classes obo:OBIB_0000063c

organ temperature measurement assayc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000066
Super-classes obo:OBIB_0000063c

anesthesia probe temperature measurement assayc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000067
Super-classes obo:OBIB_0000063c

collection packet identifierc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000068
Super-classes obo:IAO_0020000c

prosector rolec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000069
Super-classes obo:BFO_0000023c

standard operating procedurec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000070
Super-classes obo:OBI_0000272c
Sub-classes obo:OBIB_0000288c
obo:OBIB_0000073c
obo:OBIB_0000319c
obo:OBIB_0000309c
obo:OBIB_0000334c
obo:OBIB_0000314c
obo:OBIB_0000071c
obo:OBIB_0000072c
obo:OBIB_0000200c
obo:OBIB_0000222c

specimen transport SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000071
Super-classes obo:OBIB_0000070c
Sub-classes obo:OBIB_0000414c

tissue procurement SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000072
Super-classes obo:OBIB_0000070c

case report form completion SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000073
Super-classes obo:OBIB_0000070c

SOP memorandumc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000074
Super-classes obo:IAO_0000300c

SOP adjustmentc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000075
Super-classes obo:OBI_0000272c

first blood draw datec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000076
Super-classes obo:OMIABIS_0001039c

first tissue removed datec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000077
Super-classes obo:OMIABIS_0001039c

date of form data verificationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000078
Super-classes obo:IAO_0000027c

blood draw timec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000079
Super-classes obo:IAO_0000027c
Sub-classes obo:OBIB_0000080c

first blood draw timec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000080
Super-classes obo:OBIB_0000079c

first tissue removed timec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000081
Super-classes obo:OMIABIS_0001050c

time of surgical ligature for specimen collectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000082
Super-classes obo:IAO_0000027c

form data verification processc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000083
Super-classes obo:OBI_0000011c

surgical ligature processc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000084
Super-classes obo:OBI_0000011c

organization conducting specimen collection from organismc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000085
Super-classes obo:OBI_0000245c

specimen collected with specific collection packetc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000086
Super-classes obo:OBI_0001479c

autolysis value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000087
Super-classes obo:OBI_0001930c
Members obo:OBI_0002011
obo:OBI_0002009
obo:OBI_0002012
obo:OBI_0002010

followup required for specimen collection issuec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000088
Super-classes obo:IAO_0000027c

resolved specimen collection issuec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000089
Super-classes obo:IAO_0000027c

reason for not collecting frozen specimensc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000090
Super-classes obo:OMIABIS_0001037c

comment on resolved specimen collection issuec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000091
Super-classes obo:OMIABIS_0001037c

specimen donor body refrigerated indicatorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000092
Super-classes obo:IAO_0000027c

time donor body refrigerated measurementc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000093
Super-classes obo:IAO_0000416c

cessation of brain activity deathc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000094
Super-classes obo:UBERON_0035944c

cessation of cardiac activity deathc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000095
Super-classes obo:UBERON_0035944c

positive serological assay resultc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000096
Super-classes obo:IAO_0000027c

negative serological assay resultc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000097
Super-classes obo:IAO_0000027c

indeterminate serological assay resultc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000098
Super-classes obo:IAO_0000027c

non-performance of an assayc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000099
Super-classes obo:IAO_0000030c

date of surgical removal of specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000100
Super-classes obo:OMIABIS_0001039c

preoperative intravenous administration of sedativec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000101
Super-classes obo:OBI_0000011c

preoperative intravenous administration of opioid analgesicc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000102
Super-classes obo:OBI_0000011c

preoperative intravenous administration of antiemeticc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000103
Super-classes obo:OBI_0000011c

preoperative intravenous administration of antacidc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000104
Super-classes obo:OBI_0000011c

preoperative intravenous administration of medicationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000105
Super-classes obo:OBI_0000011c

administration of local anaestheticc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000106
Super-classes obo:OBI_0000011c

administration of regional anaestheticc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000107
Super-classes obo:OBI_0000011c

administration of intravenous anaestheticc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000108
Super-classes obo:OBI_0000011c

intravenous administration of opioid analgesicc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000109
Super-classes obo:OBI_0000011c

intravenous administration of muscle relaxantc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000110
Super-classes obo:OBI_0000011c

administration of inhalation anaestheticc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000111
Super-classes obo:OBI_0000011c

administration of anaestheticc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000112
Super-classes obo:OBI_0000011c

administration of insulin during surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000113
Super-classes obo:OBI_0000011c

administration of steroid during surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000114
Super-classes obo:OBI_0000011c

administration of antimicrobial agent during surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000115
Super-classes obo:OBI_0000011c

administration of medication during surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000116
Super-classes obo:OBI_0000011c

time of first surgical incisionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000117
Super-classes obo:IAO_0000027c

abdominoperineal resectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000118
Super-classes obo:OMIABIS_0001041c

left hemicolectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000119
Super-classes obo:OAE_0001159c

sigmoid colectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000120
Super-classes obo:OAE_0001159c

right hemicolectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000121
Super-classes obo:OAE_0001159c

subtotal colectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000122
Super-classes obo:OAE_0001159c

total colectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000123
Super-classes obo:OAE_0001159c

transverse colectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000124
Super-classes obo:OAE_0001159c

low anterior resectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000125
Super-classes obo:OMIABIS_0001041c

proctectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000126
Super-classes obo:OMIABIS_0001041c

proctocolectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000127
Super-classes obo:OAE_0001159c

rectosigmoidectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000128
Super-classes obo:OAE_0001159c

time of first clamp for specimen removalc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000129
Super-classes obo:IAO_0000027c

time of second clamp for specimen removalc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000130
Super-classes obo:IAO_0000027c

in vivo intraoperative ischemic periodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000131
Super-classes obo:IAO_0000416c

vital sign blood pressure variance early in organ excisionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000132
Super-classes obo:IAO_0000027c

vital sign blood pressure variance late in organ excisionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000133
Super-classes obo:IAO_0000027c

first temperature recorded in operating room of specimen donorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000134
Super-classes obo:IAO_0000582c

second temperature recorded in operating room of specimen donorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000135
Super-classes obo:IAO_0000582c

oxygen desaturation epochs prior to organ excision descriptionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000136
Super-classes obo:OMIABIS_0001037c

carbon dioxide level of specimen donor recorded at time closest to organ excisionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000137
Super-classes obo:IAO_0000109c

albumin volume administered intraoperativelyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000138
Super-classes obo:IAO_0000109c

amount of packed red blood cells administered intraoperativelyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000139
Super-classes obo:APOLLO_SV_00000032c

platelet volume administered intraoperativelyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000140
Super-classes obo:IAO_0000109c

amount of fresh frozen plasma administered intraoperativelyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000141
Super-classes obo:APOLLO_SV_00000032c

specimen donor intraoperative blood loss volume measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000142
Super-classes obo:IAO_0000109c
Sub-classes obo:OBIB_0000143c
obo:OBIB_0000144c

specimen donor intraoperative blood loss prior to organ excision volume measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000143
Super-classes obo:OBIB_0000142c

specimen donor intraoperative blood loss at end of surgery volume measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000144
Super-classes obo:OBIB_0000142c

specimen donor intraoperative urine excreted volume measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000145
Super-classes obo:IAO_0000109c
Sub-classes obo:OBIB_0000146c
obo:OBIB_0000147c

specimen donor intraoperative urine excreted prior to organ excision volume measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000146
Super-classes obo:OBIB_0000145c

specimen donor intraoperative urine excreted at end of surgery volume measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000147
Super-classes obo:OBIB_0000145c

indicator of ascites fluid collection during surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000148
Super-classes obo:IAO_0000030c

ascites fluid from specimen donor during surgery volume measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000149
Super-classes obo:IAO_0000109c

Duration of fasting by specimen donor prior to surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000150
Super-classes obo:IAO_0000416c

comment on donor pre-operative bowel preparation prior to surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000151
Super-classes obo:OMIABIS_0001037c

comment on notable events during donor surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000152
Super-classes obo:OMIABIS_0001037c

time specimen left operating roomc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000153
Super-classes obo:IAO_0000027c

hysterectomy with bilateral salpingo-oophorectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000154
Super-classes obo:OMIABIS_0001041c

hysterectomy with left salpingo-oophorectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000155
Super-classes obo:OMIABIS_0001041c

hysterectomy with right salpingo-oophorectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000156
Super-classes obo:OMIABIS_0001041c

bilateral oophorectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000157
Super-classes obo:OMIABIS_0001041c

left oophorectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000158
Super-classes obo:OMIABIS_0001041c

right oophorectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000159
Super-classes obo:OMIABIS_0001041c

pelvic exenterationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000160
Super-classes obo:OMIABIS_0001041c

pelvic mass excisionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000161
Super-classes obo:OMIABIS_0001041c

bilateral salpingo-oophorectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000162
Super-classes obo:OMIABIS_0001041c

left salpingo-oophorectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000163
Super-classes obo:OMIABIS_0001041c

right salpingo-oophorectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000164
Super-classes obo:OMIABIS_0001041c

surgical methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000165
Super-classes obo:OBI_0000272c
Sub-classes obo:OBIB_0000166c
obo:OBIB_0000169c
obo:OBIB_0000167c
obo:OBIB_0000168c
obo:OBIB_0000171c
obo:OBIB_0000183c

abdominal surgical methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000166
Super-classes obo:OBIB_0000165c

vaginal surgical methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000167
Super-classes obo:OBIB_0000165c

laparoscopic surgical methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000168
Super-classes obo:OBIB_0000165c

laparoscopically assisted vaginal surgical methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000169
Super-classes obo:OBIB_0000165c

supracervical hysterectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000170
Super-classes obo:OMIABIS_0001041c

robotic surgical methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000171
Super-classes obo:OBIB_0000165c

indicator of pelvic washings collected during ovarian surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000172
Super-classes obo:IAO_0000030c

left kidney biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000173
Super-classes obo:OBI_0002650c

right kidney biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000174
Super-classes obo:OBI_0002650c

left kidney mass excisionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000175
Super-classes obo:OMIABIS_0001041c

left partial nephrectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000176
Super-classes obo:OMIABIS_0001041c

left radical nephrectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000177
Super-classes obo:OMIABIS_0001041c

left nephroureterectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000178
Super-classes obo:OMIABIS_0001041c

right kidney mass excisionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000179
Super-classes obo:OMIABIS_0001041c

right partial nephrectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000180
Super-classes obo:OMIABIS_0001041c

right radical nephrectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000181
Super-classes obo:OMIABIS_0001041c

right nephroureterectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000182
Super-classes obo:OMIABIS_0001041c

open surgical methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000183
Super-classes obo:OBIB_0000165c

left lung biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000184
Super-classes obo:OBI_0002650c

right lung biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000185
Super-classes obo:OBI_0002650c

left lung lobectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000186
Super-classes obo:OMIABIS_0001041c

right lung lobectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000187
Super-classes obo:OMIABIS_0001041c

left lung mass excisionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000188
Super-classes obo:OMIABIS_0001041c

right lung mass excisionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000189
Super-classes obo:OMIABIS_0001041c

left pneumonectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000190
Super-classes obo:OMIABIS_0001041c

right pneumonectomyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000191
Super-classes obo:OMIABIS_0001041c

wedge resection of left lungc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000192
Super-classes obo:OMIABIS_0001041c

wedge resection of right lungc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000193
Super-classes obo:OMIABIS_0001041c

indicator of collected and banked pre-operative blood specimensc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000194
Super-classes obo:IAO_0000030c

reason for not banking pre-operative blood specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000195
Super-classes obo:OMIABIS_0001037c
Sub-classes obo:OBIB_0000198c
obo:OBIB_0000196c
obo:OBIB_0000197c
obo:OBIB_0000199c

blood not received in biobankc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000196
Super-classes obo:OBIB_0000195c

minimum amount of required pre-op blood not drawnc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000197
Super-classes obo:OBIB_0000195c

minimum number of aliquots not bankedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000198
Super-classes obo:OBIB_0000195c

blood was hemolyzed or not useablec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000199
Super-classes obo:OBIB_0000195c

receipt and dissection of surgical specimen SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000200
Super-classes obo:OBIB_0000070c

data and time of biobank receipt of specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000201
Super-classes obo:IAO_0000027c

name of biobank person receiving specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000202
Super-classes obo:IAO_0020015c

comment from specimen receiptc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000203
Super-classes obo:IAO_0000300c

parent specimen IDc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000204
Super-classes obo:OMIABIS_0001046c

name of dissector of parent specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000205
Super-classes obo:IAO_0020015c

beginning time of parent specimen dissection.c # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000206
Super-classes obo:IAO_0000027c

ending time of parent specimen dissection.c # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000207
Super-classes obo:IAO_0000027c

specimen gross appearancec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000208
Super-classes obo:IAO_0000027c
Sub-classes obo:OBIB_0000209c

specimen gross appearance of tumorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000209
Super-classes obo:OBIB_0000208c
Sub-classes obo:OBI_0002006c
obo:OBI_0002005c
obo:OBI_0002007c

obsolete_fine needle biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000210
Super-classes oboInOwl:ObsoleteClassc

obsolete_core needle biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000211
Super-classes oboInOwl:ObsoleteClassc

PAXgene fixation reagentc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000212
Super-classes obo:OBI_0000047c

neutral buffered formalinc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000213
Super-classes obo:OBI_0000047c

buffer formula for specimen fixativec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000214
Super-classes obo:OBI_0000272c

medical product expiration datec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000215
Super-classes obo:IAO_0000027c

fixative product manufacturerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000216
Super-classes obo:OBI_0000835c

commercial manufacturerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000217
Super-classes obo:OBI_0000835c

in-house manufacturerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000218
Super-classes obo:OBI_0000835c

recycled buffered formalin conditionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000219
Super-classes obo:OBIB_0000220c

buffered formalin conditionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000220
Super-classes obo:BFO_0000019c
Sub-classes obo:OBIB_0000221c
obo:OBIB_0000219c

fresh buffered formalin conditionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000221
Super-classes obo:OBIB_0000220c

blood specimen collection and processing SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000222
Super-classes obo:OBIB_0000070c

minimum required pre-operative blood tubes collectedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000223
Super-classes obo:IAO_0000030c

approval to proceed with collectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000224
Super-classes obo:IAO_0000030c

phlebotomist rolec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000225
Super-classes obo:OMRSE_00000012c

anesthesiologist rolec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000226
Super-classes obo:OMRSE_00000012c

nurse anesthetist rolec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000227
Super-classes obo:OMRSE_00000014c

operating room technicianc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000228
Super-classes obo:OMRSE_00000012c

date and time of blood collectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000229
Super-classes obo:IAO_0000027c

pre-operative blood specimen collectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000230
Super-classes obo:OBIB_0000231c

blood specimen collectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000231
Super-classes obo:OBI_0600005c
Sub-classes obo:OBIB_0000237c
obo:OBIB_0000230c

name of person performing blood drawc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000232
Super-classes obo:IAO_0020015c

blood specimen container with EDTAc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000233
Super-classes obo:OBI_0002088c

PAXgene DNA vacutainerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000234
Super-classes obo:OBI_0002088c

PAXgene RNA vacutainerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000235
Super-classes obo:OBI_0002088c

blood specimen volumec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000236
Super-classes obo:IAO_0000032c
Sub-classes obo:OBIB_0000251c

fresh venous needle blood specimen collectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000237
Super-classes obo:OBIB_0000231c

comment from blood specimen collectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000238
Super-classes obo:IAO_0000300c

data and time of laboratory receipt of specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000239
Super-classes obo:IAO_0000027c

name of person receiving blood specimen in laboratoryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000240
Super-classes obo:IAO_0020015c

temperature in lab when blood specimen was receivedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000241
Super-classes obo:IAO_0000032c

humidity in lab when blood specimen was receivedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000242
Super-classes obo:IAO_0000109c

vacutainer specimen barcodec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000243
Super-classes obo:FLU_0001019c

time of specimen freezing at approximately -20 degrees Cc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000244
Super-classes obo:OMIABIS_0001049c

time of specimen freezing at -70 to -80 degrees Cc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000245
Super-classes obo:OMIABIS_0001049c

name of person storing specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000246
Super-classes obo:IAO_0020015c

specimen was collected and stored in accordance with the specified SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000247
Super-classes obo:IAO_0000030c

comment from blood specimen storagec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000248
Super-classes obo:IAO_0000300c

time of blood processingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000249
Super-classes obo:IAO_0000027c

conical centrifuge tube identifierc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000250
Super-classes obo:IAO_0020000c

blood specimen volume in conical centrifuge tubec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000251
Super-classes obo:OBIB_0000236c

blood plasma specimen barcodec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000252
Super-classes obo:FLU_0001019c

blood plasma specimen volumec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000253
Super-classes obo:IAO_0000032c

time of blood plasma specimen placement on dry icec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000254
Super-classes obo:IAO_0000027c

cryovial specimen barcodec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000255
Super-classes obo:FLU_0001019c

time of blood plasma specimen transfer to freezerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000256
Super-classes obo:IAO_0000027c

name of person processing blood plasma specimen aliquotsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000257
Super-classes obo:IAO_0020015c

name of person transferring blood plasma specimens to freezerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000258
Super-classes obo:IAO_0020015c

specimen was processed in accordance with the specified SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000259
Super-classes obo:IAO_0000030c
Sub-classes obo:OBIB_0000381c
obo:OBIB_0000383c

comment from blood specimen processingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000260
Super-classes obo:IAO_0000300c

presence of gross hemolysis of plasma observedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000261
Super-classes obo:IAO_0000030c

cell pellet volumec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000262
Super-classes obo:IAO_0000032c

cell pellet specimen barcodec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000263
Super-classes obo:FLU_0001019c

time of completion of blood cell pellet processingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000264
Super-classes obo:IAO_0000027c

time of blood cell pellet transfer to storagec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000265
Super-classes obo:IAO_0000027c

name of person processing blood cell pellet specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000266
Super-classes obo:IAO_0020015c

date of specimen placement on dry ice for transportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000267
Super-classes obo:IAO_0000027c

time of specimen placement on dry ice for transportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000268
Super-classes obo:IAO_0000027c

date of specimen freezing at -70 to -80 degrees Cc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000269
Super-classes obo:IAO_0000027c

date of specimen transportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000270
Super-classes obo:IAO_0000027c

time of specimen transportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000271
Super-classes obo:IAO_0000027c

specimen transporting organizationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000272
Super-classes obo:BFO_0000023c

specimen receiving organizationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000273
Super-classes obo:BFO_0000023c

name of person responsible for specimen transportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000274
Super-classes obo:IAO_0020015c

name of IATA-trained person verifying specimen transportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000275
Super-classes obo:IAO_0020015c

date of receiving specimen transportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000276
Super-classes obo:IAO_0000027c

time of receiving specimen transportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000277
Super-classes obo:IAO_0000027c

temperature of specimen collection packet at time of receiptc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000278
Super-classes obo:IAO_0000032c

name of person receiving specimen shipmentc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000279
Super-classes obo:IAO_0000027c

specimen shipment received in good conditionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000280
Super-classes obo:IAO_0000030c

specimen shipment received in poor conditionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000281
Super-classes obo:IAO_0000030c

comment on specimen integrity after transportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000282
Super-classes obo:IAO_0000300c

date of specimen receipt for pathologist processingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000283
Super-classes obo:IAO_0000027c

time of receipt for pathologist processingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000284
Super-classes obo:IAO_0000027c

name of quality control inspector of specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000285
Super-classes obo:IAO_0020015c

name of data entry person for tissue recovery formc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000286
Super-classes obo:IAO_0020015c

name of team leader for filling out tissue recovery formc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000287
Super-classes obo:IAO_0020015c

FFPE tissue processing SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000288
Super-classes obo:OBIB_0000070c

equipment maintained as per manufacturer recommendationsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000289
Super-classes obo:IAO_0000030c

comment on maintenance discrepancy from manufacturer recommendationsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000290
Super-classes obo:IAO_0000300c

FFPE clearing agent rolec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000291
Super-classes obo:BFO_0000023c

adherence of alcohol stage duration to FFPE tissue processing SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000292
Super-classes obo:IAO_0000030c

FFPE alcohol stage durationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000293
Super-classes obo:IAO_0000416c

adherence of dehydration process duration to FFPE tissue processing SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000294
Super-classes obo:IAO_0000030c

FFPE dehydration process durationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000295
Super-classes obo:IAO_0000416c

adherence of dehydration process temperature to FFPE tissue processing SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000296
Super-classes obo:IAO_0000030c

FFPE dehydration process temperaturec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000297
Super-classes obo:IAO_0000032c

adherence of stage and replicate numbers to FFPE tissue processing SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000298
Super-classes obo:IAO_0000030c

number of FFPE stages/replicatesc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000299
Super-classes obo:IAO_0000027c

adherence of duration in clearing agent to FFPE tissue processing SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000300
Super-classes obo:IAO_0000030c

FFPE clearing agent durationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000301
Super-classes obo:IAO_0000416c

adherence of temperature of clearing agent to FFPE tissue processing SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000302
Super-classes obo:IAO_0000030c

FFPE clearing agent temperaturec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000303
Super-classes obo:IAO_0000032c

adherence to paraffin impregnation method in FFPE tissue processing SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000304
Super-classes obo:IAO_0000030c

FFPE paraffin impregnation methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000305
Super-classes obo:OBI_0000272c

adherence of paraffin temperature to FFPE tissue processing SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000306
Super-classes obo:IAO_0000030c

FFPE paraffin temperaturec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000307
Super-classes obo:IAO_0000032c

comment on FFPE tissue processingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000308
Super-classes obo:IAO_0000300c

FFPE tissue paraffin embedding SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000309
Super-classes obo:OBIB_0000070c

FFPE paraffin processing for embedding temperaturec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000310
Super-classes obo:IAO_0000032c

fresh paraffinc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000311
Super-classes obo:DRON_00015464c

age of paraffinc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000312
Super-classes obo:IAO_0000032c

total time FFPE freshly poured blocks were cooledc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000313
Super-classes obo:IAO_0000416c

FFPE tissue block handling, tracking, and storage SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000314
Super-classes obo:OBIB_0000070c

adherence to FFPE tissue block storage SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000315
Super-classes obo:IAO_0000030c

comment on FFPE tissue block storagec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000316
Super-classes obo:IAO_0000300c

comment on paraffin embedding of FFPE tissuec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000317
Super-classes obo:IAO_0000300c

name of specimen slide preparation technicianc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000318
Super-classes obo:IAO_0020015c

FFPE tissue section preparation SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000319
Super-classes obo:OBIB_0000070c

microtome blade agec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000320
Super-classes obo:PATO_0000011c
Sub-classes obo:OBIB_0000321c

fresh microtome bladec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000321
Super-classes obo:OBIB_0000320c

preparation of FFPE block face for sectioning protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000322
Super-classes obo:OBI_0000272c

description of glass slide chargec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000323
Super-classes obo:IAO_0000300c

charged glass slide indicatorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000324
Super-classes obo:IAO_0000030c

uncharged glass slide indicatorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000325
Super-classes obo:IAO_0000030c

FFPE water bath temperaturec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000326
Super-classes obo:IAO_0000032c

microtome maintenance frequencyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000327
Super-classes obo:IAO_0000030c
Sub-classes obo:OBIB_0000328c

daily microtome maintenancec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000328
Super-classes obo:OBIB_0000327c

comment on deviations from microtome daily maintenance SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000329
Super-classes obo:IAO_0000300c

water bath maintenance frequencyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000330
Super-classes obo:IAO_0000030c
Sub-classes obo:OBIB_0000331c

daily water bath maintenancec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000331
Super-classes obo:OBIB_0000330c

comment on deviations from water bath daily maintenance SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000332
Super-classes obo:IAO_0000300c

comment on preparation of FFPE tissue sectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000333
Super-classes obo:IAO_0000300c

FFPE tissue section H&E staining and mounting SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000334
Super-classes obo:OBIB_0000070c

FFPE tissue section H&E staining in oven durationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000335
Super-classes obo:IAO_0000416c

oven temperature during FFPE tissue section H&E stainingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000336
Super-classes obo:IAO_0000032c

FFPE tissue section H&E deparaffinization protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000337
Super-classes obo:OBI_0000272c

FFPE tissue section H&E staining protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000338
Super-classes obo:OBI_0000272c

FFPE tissue section H&E clearing protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000339
Super-classes obo:OBI_0000272c

FFPE tissue section H&E cover slip protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000340
Super-classes obo:OBI_0000272c

manual FFPE tissue section H&E deparaffinizationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000341
Super-classes obo:OBI_0000011c

manual FFPE tissue section H&E stainingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000342
Super-classes obo:OBI_0000011c

manual FFPE tissue section H&E clearingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000343
Super-classes obo:OBI_0000011c

manual FFPE tissue section H&E cover slippingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000344
Super-classes obo:OBI_0000011c

comment on preparation of FFPE H&E stained slidec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000345
Super-classes obo:IAO_0000300c

H&E staining equipment maintenance performed and recorded frequencyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000346
Super-classes obo:IAO_0000027c

H&E staining equipment maintenance performed and recorded frequency value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000347
Super-classes obo:OBI_0001930c

comment on deviations from H&E equipment maintenance SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000348
Super-classes obo:IAO_0000300c

specimen randomization key IDc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000349
Super-classes obo:FLU_0001019c

manager of human research protocol requirements rolec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000350
Super-classes obo:BFO_0000023c

transplant alert associated with specimen donorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000351
Super-classes obo:IAO_0000300c

serology alert associated with specimen donorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000352
Super-classes obo:IAO_0000300c

data and time parent specimen ID was recordedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000353
Super-classes obo:IAO_0000027c

comment on tissue specimen processingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000354
Super-classes obo:IAO_0000300c

human brain biobankc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000355
Super-classes obo:OMIABIS_0000000c

central biobankc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000356
Super-classes obo:OMIABIS_0000000c

laboratory, data analysis, and coordinating center for human specimensc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000357
Super-classes core:Laboratoryc

pathology research centerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000358
Super-classes core:Laboratoryc

time specimen place in stabilizerc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000359
Super-classes obo:IAO_0000027c

collection packet component IDc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000360
Super-classes obo:IAO_0020000c

data and time specimen was frozen in liquid nitrogenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000361
Super-classes obo:IAO_0000027c

weight of frozen tissue specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000362
Super-classes obo:IAO_0000414c

FFPE fixation protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000363
Super-classes obo:OBI_0000272c
Sub-classes obo:OBIB_0000364c

FFPE fixation delay protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000364
Super-classes obo:OBIB_0000363c

FFPE tissue cassette IDc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000365
Super-classes obo:OMIABIS_0001046c

data and time FFPE tissue cassette ID was recordedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000366
Super-classes obo:IAO_0000027c

date and time FFPE tissue cassette placed in fixativec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000367
Super-classes obo:IAO_0000027c

placement of tissue cassette in FFPE fixative delay durationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000368
Super-classes obo:IAO_0000416c

date and time FFPE tissue cassette placed in processorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000369
Super-classes obo:IAO_0000027c

date and time FFPE tissue processor cycle endedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000370
Super-classes obo:IAO_0000027c

time in FFPE fixative measurementc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000371
Super-classes obo:OBIB_0000060c

date and time FFPE tissue cassette removed from processorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000372
Super-classes obo:IAO_0000027c

date and time FFPE tissue embedding startedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000373
Super-classes obo:IAO_0000027c

measurement of time between FFPE tissue processor cycle completion and embeddingc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000374
Super-classes obo:IAO_0000416c

date and time FFPE tissue cassette was frozenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000375
Super-classes obo:IAO_0000027c

FFPE freezing protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000376
Super-classes obo:OBI_0000272c

FFPE freezing by dry ice protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000377
Super-classes obo:OBI_0000272c

FFPE freezing by LN2 vapor phase protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000378
Super-classes obo:OBI_0000272c

date and time FFPE tissue cassette transferred to storagec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000379
Super-classes obo:IAO_0000027c

name of dissector of normal adjacent tissue to tumor for FFPEc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000380
Super-classes obo:IAO_0020015c

specimen was processed in accordance with the FFPE SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000381
Super-classes obo:OBIB_0000259c

date and time FFPE tissue was preservedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000382
Super-classes obo:IAO_0000027c

specimen was processed in accordance with the FFPE SOP including <1 hour delay to fixation and 23 hour time in fixativec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000383
Super-classes obo:OBIB_0000259c

comment on procurement site restrictionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000384
Super-classes obo:OMIABIS_0001037c

specimen image IDc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000385
Super-classes obo:IAO_0020000c

comment on FFPE slide imagec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000386
Super-classes obo:IAO_0000300c

name of submitter of pathology case summary report.c # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000387
Super-classes obo:IAO_0020015c

date of submission of pathology case summary reportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000388
Super-classes obo:IAO_0000027c

name of reviewer of pathology case summary report.c # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000389
Super-classes obo:IAO_0020015c

date of review of pathology case summary reportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000390
Super-classes obo:IAO_0000027c

pathologist submitted specimen procurement feedbackc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000391
Super-classes obo:OMIABIS_0001037c

greatest tumor dimension on slidec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000392
Super-classes obo:IAO_0000408c

percentage of cross-sectional surface area of entire slide composed of tumor focusc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000393
Super-classes obo:IAO_0000027c

percentage of tumor cellularity by cell count of the entire slide.c # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000394
Super-classes obo:IAO_0000027c

percentage of cross-sectional surface area of entire slide composed of necrotic tissuec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000395
Super-classes obo:IAO_0000027c

histologic profile quantitative assessment of tumor slide specimen surface areac # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000396
Super-classes obo:IAO_0000027c

percentage of viable tumor slide specimen by surface areac # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000397
Super-classes obo:IAO_0000027c

percentage of necrotic tumor slide specimen by surface areac # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000398
Super-classes obo:IAO_0000027c

percentage of tumor slide specimen stroma by surface areac # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000399
Super-classes obo:IAO_0000027c

percentage of non-cellular component of tumor slide specimen by surface areac # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000400
Super-classes obo:IAO_0000027c

non-cellular component of tumor slide specimen descriptionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000401
Super-classes obo:IAO_0000300c

confirmation of histologic type of FFPE H&E tumor slidec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000402
Super-classes obo:IAO_0000030c

FFPE slide meets necrosis percentage and tumor content criteriac # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000403
Super-classes obo:IAO_0000030c

FFPE slide findings that do not meet microscopic analysis criteriac # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000404
Super-classes obo:IAO_0000300c

comment from pathology review of FFPE slidec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000405
Super-classes obo:IAO_0000300c

FFPE slide consistent with findings of diagnostic pathology reportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000406
Super-classes obo:IAO_0000030c

FFPE slide inconsistencies with findings of diagnostic pathology reportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000407
Super-classes obo:IAO_0000300c

name of reviewing pathologist at organization conducting specimen collectionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000408
Super-classes obo:IAO_0020015c

date of FFPE slide review by the pathologistc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000409
Super-classes obo:IAO_0000027c

name of data entry person for local pathology review formc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000410
Super-classes obo:IAO_0020015c

presence of sarcomatoid features on specimen slidec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000411
Super-classes obo:IAO_0000030c

sarcomatoid features observed on FFPE slidec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000412
Super-classes obo:IAO_0000300c

name of person in gross room receiving OR specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000413
Super-classes obo:IAO_0020015c

specimen transport from OR to gross room SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000414
Super-classes obo:OBIB_0000071c

specimen transport from OR to gross room was performed as per SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000415
Super-classes obo:IAO_0000030c

specimen transport from OR to gross room issues or deviations from SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000416
Super-classes obo:IAO_0000300c

temperature in gross room when specimen arrived from ORc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000417
Super-classes obo:IAO_0000032c

humidity in gross room when specimen arrived from ORc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000418
Super-classes obo:IAO_0000109c

name of performer of gross evaluation of resected tissue specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000419
Super-classes obo:IAO_0020015c

resected tissue specimen mass measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000420
Super-classes obo:IAO_0000414c

gross appearance of disease in resected tissuec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000421
Super-classes obo:IAO_0000030c

comment on gross evaluation of resected tissue specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000422
Super-classes obo:IAO_0000300c

gross diagnosis of resected tissuec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000423
Super-classes obo:OGMS_0000073c

photograph of tissue was taken in pathology gross roomc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000424
Super-classes obo:IAO_0000030c

reason for not taking a photograph of resected tissue in pathology gross roomc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000425
Super-classes obo:IAO_0000300c

pathology ink used on resected tissue specimenc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000426
Super-classes obo:IAO_0000030c

ink used for marking surgical marginc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000427
Super-classes obo:OBI_0000047c

tumor tissue was released to the biobankc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000428
Super-classes obo:IAO_0000030c

explanation of why tumor tissue specimen was not released to a biobankc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000429
Super-classes obo:IAO_0000300c

percentage of gross area of necrosis of a specimen sent to biobankc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000430
Super-classes obo:IAO_0000027c

percentage of tumor content of specimen sent to biobankc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000431
Super-classes obo:IAO_0000027c

second piece of tumor tissue was collectedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000432
Super-classes obo:IAO_0000030c

dimensions of each specimen meet the criteria specified within the relevant tissue procurement SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000433
Super-classes obo:IAO_0000030c

comment on deviations in specimen dimensions from a tissue procurement SOPc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000434
Super-classes obo:IAO_0000300c

normal adjacent tissue released to the biobank in addition to tumor tissuec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000435
Super-classes obo:IAO_0000030c

time of specimen transfer from pathology gross room to a biobankc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000436
Super-classes obo:IAO_0000027c

no recurrence of tumorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000438
Super-classes obo:IAO_0000030c

follow-up on donor outcome comment from tissue procurementc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000439
Super-classes obo:OMIABIS_0001037c

participant signed and dated informed consent formc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000440
Super-classes obo:IAO_0000030c

specimen collection quality review commentc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000441
Super-classes obo:IAO_0000300c

minimum required pre-operative RNA and DNA PAXgene tubes were collectedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000442
Super-classes obo:IAO_0000030c

desired plasma and serum aliquots were obtainedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000443
Super-classes obo:IAO_0000030c

top priority tumor specimen was obtained and processed with a particular FFPE fixation delay protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000444
Super-classes obo:IAO_0000030c

additional tumor specimen was obtained and processed with a particular FFPE fixation delay protocolc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000445
Super-classes obo:IAO_0000030c

local pathology review of QC FFPE tumor tissue H&E slide was completedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000446
Super-classes obo:IAO_0000030c

local pathology review was consistent with site of tissue procurement diagnostic pathology reportc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000447
Super-classes obo:IAO_0000030c

specimen donor clinical data entry was completedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000448
Super-classes obo:IAO_0000030c

tumor specimen satisfied criteria of necrosis percentage and tumor contentc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000449
Super-classes obo:IAO_0000030c

all requirements for an investigation are met enabling release of specimen for shipment.c # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000450
Super-classes obo:IAO_0000030c

activity related to a particular specimen donor was stopped.c # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000451
Super-classes obo:IAO_0000030c
Sub-classes obo:OBIB_0000454c
obo:OBIB_0000453c
obo:OBIB_0000452c
obo:OBIB_0000455c
obo:OBIB_0000456c

activity related to a particular specimen donor was stopped because not enough blood collectedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000452
Super-classes obo:OBIB_0000451c

activity related to a particular specimen donor was stopped because not enough tissuec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000453
Super-classes obo:OBIB_0000451c

activity related to a particular specimen donor was stopped because tissue was too necroticc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000454
Super-classes obo:OBIB_0000451c

activity related to a particular specimen donor was stopped because tissue was benignc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000455
Super-classes obo:OBIB_0000451c

activity related to a particular specimen donor was stopped because tissue was not released to a biobankc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000456
Super-classes obo:OBIB_0000451c

research authorization for post mortem specimen donationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000457
Super-classes obo:ICO_0000046c

research authorization obtainer role for post mortem donation of specimens from a legally authorized representativec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000458
Super-classes obo:BFO_0000023c

research authorization documentation for post mortem specimen donationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000459
Super-classes obo:ICO_0000075c
Sub-classes obo:OBIB_0000466c
obo:OBIB_0000468c
obo:OBIB_0000462c
obo:OBI_0002008c
obo:OBIB_0000465c
obo:OBIB_0000470c
obo:OBIB_0000467c
obo:OBIB_0000469c
obo:OBIB_0000463c
obo:OBIB_0000471c
obo:OBIB_0000461c
obo:OBIB_0000464c

research authorization for post mortem specimen donation was obtainedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000460
Super-classes obo:IAO_0000030c

research authorization documentation for post mortem specimen donation that is affirmativec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000461
Super-classes obo:OBIB_0000459c

research authorization documentation for post mortem specimen donation that is negativec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000462
Super-classes obo:OBIB_0000459c

research authorization for post mortem specimen donation not obtained due to religious reasonsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000463
Super-classes obo:OBIB_0000459c

research authorization for post mortem specimen donation not obtained due to surgeon's recommendationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000464
Super-classes obo:OBIB_0000459c

research authorization for post mortem specimen donation not obtained because legally authorized representative felt pressuredc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000465
Super-classes obo:OBIB_0000459c

research authorization for post mortem specimen donation not obtained because legally authorized representative felt too distraughtc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000466
Super-classes obo:OBIB_0000459c

research authorization for post mortem specimen donation not obtained because legally authorized representative needed more time to make a decisionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000467
Super-classes obo:OBIB_0000459c

research authorization for post mortem specimen donation not obtained because legally authorized representative was uncomfortable with the risksc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000468
Super-classes obo:OBIB_0000459c

research authorization for post mortem specimen donation not obtained because legally authorized representative was afraid the decision might affect the surgery plans of donorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000469
Super-classes obo:OBIB_0000459c

research authorization for post mortem specimen donation not obtained because legally authorized representative did not agree with the activity of biobanking.c # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000470
Super-classes obo:OBIB_0000459c

research authorization for post mortem specimen donation not obtained because legally authorized representative did not show up to the appointment as scheduled.c # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000471
Super-classes obo:OBIB_0000459c

date of research protocol approval as determined by an institutional review boardc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000472
Super-classes obo:IAO_0000027c

date of research protocol expiration as determined by an institutional review boardc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000473
Super-classes obo:IAO_0000027c

identification number of a protocol at a particular sitec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000474
Super-classes obo:IAO_0000577c

date that research authorization for post mortem specimen donation was witnessedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000475
Super-classes obo:IAO_0000027c

date of research authorization verificationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000476
Super-classes obo:IAO_0000027c

name of person screening specimen donorsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000477
Super-classes obo:IAO_0020015c

name of person obtaining authorization from legally authorized representative for post-mortem specimen donationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000478
Super-classes obo:IAO_0020015c

date on which research authorization was obtained from legally authorized representativec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000479
Super-classes obo:IAO_0000027c

identifier for legally authorized representativec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000480
Super-classes obo:IAO_0020000c

relationship between person signing research authorization and specimen donorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000481
Super-classes obo:BFO_0000020c

specimen donor's date of birthc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000482
Super-classes efo:EFO_0004950c

donor's biological sexc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000483
Super-classes obo:PATO_0000047c

post mortem donor rolec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000484
Super-classes obo:BFO_0000023c

age of specimen donor at time that authorization from legally authorized representative was obtainedc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000485
Super-classes obo:OBI_0001167c

indicator of whether specimen donor has reached the age of majorityc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000486
Super-classes obo:IAO_0000030c

comments related to research authorization processc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000487
Super-classes obo:IAO_0000300c

willingness to be contacted for a research studyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000488
Super-classes obo:IAO_0000030c

agreement to a specified research addendumc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000489
Super-classes obo:ICO_0000075c

authorization documentation for postmortem specimen donation for a specified purposec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000490
Super-classes obo:ICO_0000075c
Sub-classes obo:OBIB_0000493c
obo:OBIB_0000491c
obo:OBIB_0000494c
obo:OBIB_0000492c

authorization for postmortem specimen donation for transplantation purposes onlyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000491
Super-classes obo:OBIB_0000490c

authorization for postmortem specimen donation for transplantation and researchc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000492
Super-classes obo:OBIB_0000490c

authorization not obtained for whole brain donationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000493
Super-classes obo:OBIB_0000490c

limitations on research authorization for use of donated specimensc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000494
Super-classes obo:OBIB_0000490c

presence of metastatic tumor exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000495
Super-classes obo:OBI_0500028c

presence of a tumor larger than a specified size exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000496
Super-classes obo:OBI_0500028c

authorization to collect of minimum number of organ/tissue types for a specific study inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000497
Super-classes obo:OBI_0500027c

tissue collection timing and placed in fixative inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000498
Super-classes obo:OBI_0500027c

time since radiation therapy was received prior to surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000499
Super-classes obo:IAO_0000416c

time since chemotherapy was received prior to surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000500
Super-classes obo:IAO_0000416c

time since immunotherapy was received prior to surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000501
Super-classes obo:IAO_0000416c

time since hormonal therapy was received prior to surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000502
Super-classes obo:IAO_0000416c

date of radiation therapy prior to surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000503
Super-classes obo:IAO_0000027c

date of chemotherapy prior to surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000504
Super-classes obo:IAO_0000027c

date of immunotherapy prior to surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000505
Super-classes obo:IAO_0000027c

date of hormonal therapy prior to surgeryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000506
Super-classes obo:IAO_0000027c

lifelong non-drinker of alcoholc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000507
Super-classes obo:NCIT_C81229c

current non-drinker of alcoholc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000508
Super-classes obo:NCIT_C81229c

moderate alcohol consumption historyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000509
Super-classes obo:NCIT_C81229c

greater than moderate alcohol consumption historyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000510
Super-classes obo:NCIT_C81229c

duration of greater than moderate alcohol consumption prior to enrollmentc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000511
Super-classes obo:IAO_0000416c

lifelong non-smoker historyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000512
Super-classes obo:NCIT_C29719c

current smoker historyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000513
Super-classes obo:NCIT_C29719c

current reformed smoker for more than 15 years historyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000514
Super-classes obo:NCIT_C29719c

current reformed smoker for less than 15 years historyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000515
Super-classes obo:NCIT_C29719c

timing of scoring performance statusc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000516
Super-classes obo:BFO_0000038c
Sub-classes obo:OBIB_0000519c
obo:OBIB_0000518c
obo:OBIB_0000517c

preoperative performance status scorec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000517
Super-classes obo:OBIB_0000516c

pre-adjuvant performance status scorec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000518
Super-classes obo:OBIB_0000516c

post adjuvant performance status scorec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000519
Super-classes obo:OBIB_0000516c

comment from clinical data entry formc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000520
Super-classes obo:IAO_0000300c

pill-based hormonal birth control methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000521
Super-classes obo:NCIT_C106501c

injection-based hormonal birth control methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000522
Super-classes obo:NCIT_C106501c

intrauterine device-based hormonal birth control methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000523
Super-classes obo:NCIT_C106501c

patch-based hormonal birth control methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000524
Super-classes obo:NCIT_C106501c

vaginal ring-based hormonal birth control methodc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000525
Super-classes obo:NCIT_C106501c

duration of hormonal birth control use prior to enrollmentc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000526
Super-classes obo:IAO_0000416c

time since last usage of hormonal birth controlc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000527
Super-classes obo:IAO_0000416c

comment on the use of hormonally based birth controlc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000528
Super-classes obo:IAO_0000300c

duration of hormone replacement therapy prior to enrollmentc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000529
Super-classes obo:IAO_0000416c

time since last usage of hormone replacement therapyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000530
Super-classes obo:IAO_0000416c

comment on the use of hormone replacement therapyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000531
Super-classes obo:IAO_0000300c

comment on exposure to environmental and workplace carcinogensc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000532
Super-classes obo:IAO_0000300c

colorectal cancer risk factorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000533
Super-classes efo:EFO_0003919c
Sub-classes obo:OBIB_0000536c
obo:OBIB_0000534c
obo:OBIB_0000535c
obo:OBIB_0000538c
obo:OBIB_0000537c

high meat diet colorectal cancer risk factorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000534
Super-classes obo:OBIB_0000533c

obesity colorectal cancer risk factorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000535
Super-classes obo:OBIB_0000533c

Type II diabetes colorectal cancer risk factorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000536
Super-classes obo:OBIB_0000533c

previous colorectal polyps colorectal cancer risk factorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000537
Super-classes obo:OBIB_0000533c

familial adenomatous polyposis colorectal cancer risk factorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000538
Super-classes obo:OBIB_0000533c

estrogen alone hormone replacement therapyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000539
Super-classes efo:EFO_0003961c

estrogen with progestin hormone replacement therapyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000540
Super-classes efo:EFO_0003961c

progestin alone hormone replacement therapyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000541
Super-classes efo:EFO_0003961c

testosterone hormone replacement therapyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000542
Super-classes efo:EFO_0003961c

clinical history of sepsisc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000543
Super-classes obo:OGMS_0000015c

clinical history of pneumoniac # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000544
Super-classes obo:OGMS_0000015c

clinical history of open woundsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000545
Super-classes obo:OGMS_0000015c

clinical history of high unexplained feverc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000546
Super-classes obo:OGMS_0000015c

clinical history of positive blood culturesc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000547
Super-classes obo:OGMS_0000015c

clinical history of abnormal white blood cell levelsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000548
Super-classes obo:OGMS_0000015c

clinical history of fungal infectionsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000549
Super-classes obo:OGMS_0000015c

clinical history of ascitesc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000550
Super-classes obo:OGMS_0000015c

clinical history of cellulitisc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000551
Super-classes obo:OGMS_0000015c

clinical history of blood transfusion in foreign countryc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000552
Super-classes obo:OGMS_0000015c

clinical history of human tissue transplantc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000553
Super-classes obo:OGMS_0000015c

clinical history of animal tissue xenotransplantc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000554
Super-classes obo:OGMS_0000015c

clinical history of smallpox vaccinationc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000555
Super-classes obo:OGMS_0000015c

a clinical history of contact with someone with smallpoxc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000556
Super-classes obo:OGMS_0000015c

clinical history of dialysisc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000557
Super-classes obo:OGMS_0000015c

clinical history of cancer at deathc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000558
Super-classes obo:OGMS_0000015c

clinical history of cancer within a time period before deathc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000559
Super-classes obo:OGMS_0000015c

clinical history of tuberculosisc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000560
Super-classes obo:OGMS_0000015c

clinical history of meningitis at deathc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000561
Super-classes obo:OGMS_0000015c

clinical history of encephalitisc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000562
Super-classes obo:OGMS_0000015c

clinical history of long term steroid usec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000563
Super-classes obo:OGMS_0000015c

clinical history of osteomyelitisc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000564
Super-classes obo:OGMS_0000015c

clinical history of unexplained seizuresc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000565
Super-classes obo:OGMS_0000015c

clinical history of unexplained weakness and fatiguec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000566
Super-classes obo:OGMS_0000015c

clinical history of exposure to toxinsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000567
Super-classes obo:OGMS_0000015c

clinical history of exposure to rabiesc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000568
Super-classes obo:OGMS_0000015c

indication of heroin usec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000569
Super-classes obo:IAO_0000030c

Indication of recent cocaine usec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000570
Super-classes obo:IAO_0000030c

indication of male homosexual sexual activityc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000571
Super-classes obo:IAO_0000030c

an indication of illegal injectable drug usec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000572
Super-classes obo:IAO_0000030c

clinical history of clotting disordersc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000573
Super-classes obo:OGMS_0000015c

clinical history of growth hormone usec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000574
Super-classes obo:OGMS_0000015c

clinical history of inability to have Human Immunodeficiency Virus testing due to hemodilutionc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000575
Super-classes obo:OGMS_0000015c

clinical history of unexplained weight lossc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000576
Super-classes obo:OGMS_0000015c

clinical history of night sweatsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000577
Super-classes obo:OGMS_0000015c

clinical history of blue or purple spots on skin or mucous membranesc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000578
Super-classes obo:OGMS_0000015c

clinical history of unexplained lymphadenopathyc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000579
Super-classes obo:OGMS_0000015c

clinical history of a prolonged feverc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000580
Super-classes obo:OGMS_0000015c

clinical history of an unexplained cough or shortness of breathc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000581
Super-classes obo:OGMS_0000015c

clinical history of opportunistic infectionsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000582
Super-classes obo:OGMS_0000015c

clinical history of sexually transmitted diseasec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000583
Super-classes obo:OGMS_0000015c

clinical history of drug abusec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000584
Super-classes obo:OGMS_0000015c

clinical history of Severe Acute Respiratory Syndromec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000585
Super-classes obo:OGMS_0000015c

clinical history of exposure to Severe Acute Respiratory Syndromec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000586
Super-classes obo:OGMS_0000015c

clinical history of West Nile Virusc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000587
Super-classes obo:OGMS_0000015c

clinical history of West Nile Virus exposurec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000588
Super-classes obo:OGMS_0000015c

clinical history of gonorrheac # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000589
Super-classes obo:OGMS_0000015c

clinical history of syphilisc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000590
Super-classes obo:OGMS_0000015c

clinical history of Hepatitis Bc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000591
Super-classes obo:OGMS_0000015c

clinical history of Hepatitis Cc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000592
Super-classes obo:OGMS_0000015c

clinical history of Human Immunodeficiency Virusc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000593
Super-classes obo:OGMS_0000015c

clinical history of lupusc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000594
Super-classes obo:OGMS_0000015c

clinical history of sarcoidosisc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000595
Super-classes obo:OGMS_0000015c

clinical history of sclerodermac # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000596
Super-classes obo:OGMS_0000015c

clinical history of Reye's Syndromec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000597
Super-classes obo:OGMS_0000015c

clinical history of rheumatoid arthritisc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000598
Super-classes obo:OGMS_0000015c

clinical history of idiopathic heart diseasec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000599
Super-classes obo:OGMS_0000015c

clinical history of Alzheimer's diseasec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000600
Super-classes obo:OGMS_0000015c

clinical history of dementia of unknown causec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000601
Super-classes obo:OGMS_0000015c

clinical history of Multiple Sclerosisc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000602
Super-classes obo:OGMS_0000015c

clinical history of Amyotrophic Lateral Sclerosisc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000603
Super-classes obo:OGMS_0000015c

indication of having resided in a Northern European military basec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000604
Super-classes obo:IAO_0000030c

indication of having resided in Europe during a specific time framec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000605
Super-classes obo:IAO_0000030c

indication of performing sexual acts in exchange for money or drugsc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000606
Super-classes obo:IAO_0000030c

indication of time in jailc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000607
Super-classes obo:IAO_0000030c

indication of a tattoo from unregulated tattoo parlorc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000608
Super-classes obo:IAO_0000030c

indication of illegal prescription drug usec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000609
Super-classes obo:IAO_0000030c

indication of intravenous drug usec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000610
Super-classes obo:IAO_0000030c

indication of having lived in the United Kingdom during specific time framec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000611
Super-classes obo:IAO_0000030c

indication of body piercing from non-professionalc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000612
Super-classes obo:IAO_0000030c

indication of tattoo from non-professionalc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000613
Super-classes obo:IAO_0000030c

indication of residence in state-run group home at time of deathc # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000614
Super-classes obo:IAO_0000030c

indication of having resided in Europe during specific time framec # Classes

URI http://purl.obolibrary.org/obo/OBIB_0000615
Super-classes obo:IAO_0000030c

planned processc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000011
Super-classes obo:BFO_0000015c
Sub-classes obo:OBIB_0000341c
obo:OBIB_0000106c
obo:OMIABIS_0001033c
obo:OBIB_0000342c
obo:OBI_0000659c
obo:IAO_0020010c
obo:OBIB_0000114c
obo:APOLLO_SV_00000033c
obo:OGMS_0000090c
obo:OBIB_0000084c
obo:OBIB_0000101c
obo:OBIB_0000343c
obo:OBI_0000471c
obo:OBIB_0000083c
obo:OBI_0302908c
obo:OBIB_0000109c
obo:OBIB_0000115c
obo:OMIABIS_0001035c
obo:OBI_0000094c
obo:OGMS_0000104c
obo:OBI_0000066c
obo:OBIB_0000112c
obo:OBI_0001007c
obo:OBIB_0000113c
obo:OBIB_0000107c
obo:OBIB_0000103c
obo:OMIABIS_0001041c
obo:IAO_0000572c
obo:OBI_0002201c
obo:OBIB_0000102c
obo:OMIABIS_0001034c
obo:OBI_0000838c
obo:OBIB_0000110c
efo:EFO_0004318c
obo:OMIABIS_0001080c
obo:OBIB_0000111c
obo:OMIABIS_0000011c
obo:OBI_0200000c
obo:OBIB_0000033c
obo:OBIB_0000116c
obo:OBI_0000338c
obo:OBIB_0000011c
obo:OBIB_0000344c
obo:OBI_0000810c
obo:OBIB_0000104c
obo:OBIB_0000108c
obo:OBI_0001928c
obo:OBI_0000070c
obo:OMIABIS_0000061c
obo:OMIABIS_0001036c
obo:ICO_0000046c
obo:OBI_0001173c
obo:OGMS_0000097c
efo:EFO_0004774c
obo:OBIB_0000105c
In domain of obo:OBI_0000417op
obo:OBI_0000299op
obo:OBI_0000293op
In range of obo:OBI_0000312op
obo:OBI_0000295op
obo:OBI_0000833op

regulator rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000014
Super-classes obo:OBI_0000017c

regulatory rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000017
Super-classes obo:BFO_0000023c
Sub-classes obo:OBI_0000014c

material supplier rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000018
Super-classes obo:OBI_0000947c

processed materialc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000047
Super-classes obo:BFO_0000040c
Sub-classes obo:OBI_0001879c
obo:DRON_00017834c
obo:OBI_0100060c
obo:OBI_0002406c
obo:OBI_0000079c
obo:OBI_0000423c
obo:DRON_00015464c
obo:OBIB_0000057c
obo:OBI_0001912c
obo:OBI_0000953c
obo:OBIB_0000213c
obo:CL_0000578c
obo:OBIB_0000048c
obo:OBI_0000968c
obo:OBIB_0000427c
obo:OBIB_0000212c
obo:OBI_1000024c
obo:OBI_0001936c

investigationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000066
Super-classes obo:OBI_0000011c
Restrictions obo:BFO_0000051op some obo:OBI_0000471c
obo:BFO_0000051op some obo:IAO_0000572c
obo:BFO_0000051op some (obo:OBI_0000339c and ub385bL10330C17c)
obo:BFO_0000051op some obo:OBI_0000338c

evaluant rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000067
Super-classes obo:BFO_0000023c
Restrictions obo:BFO_0000054op only obo:OBI_0000070c
obo:RO_0000052op some obo:BFO_0000040c

assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000070
Super-classes obo:OBI_0000011c
Restrictions obo:BFO_0000055op some obo:OBI_0000067c
obo:OBI_0000293op some (obo:BFO_0000040c and ub385bL10383C17c and obo:IAO_0000027c and ub385bL10396C17c)
obo:OBI_0000299op some (obo:BFO_0000040c and ub385bL10383C17c and obo:IAO_0000027c and ub385bL10396C17c)
Sub-classes obo:OBI_0002140c
obo:OBI_0002141c
obo:OBI_0000443c

culture mediumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000079
Super-classes obo:OBI_0000047c

reagent rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000086
Description

(copied from ReO) Reagents are distinguished from instruments or devices that also participate in scientific techniques by the fact that reagents are chemical or biological in nature and necessarily participate in or have parts that participate in some chemical interaction or reaction during their intended participation in some technique. By contrast, instruments do not participate in a chemical reaction/interaction during the technique.

Reagents are distinguished from study subjects/evaluants in that study subjects and evaluants are that about which conclusions are drawn and knowledge is sought in an investigation - while reagents, by definition, are not. It should be noted, however, that reagent and study subject/evaluant roles can be borne by instances of the same type of material entity - but a given instance will realize only one of these roles in the execution of a given assay or technique. For example, taq polymerase can bear a reagent role or an evaluant role. In a DNA sequencing assay aimed at generating sequence data about some plasmid, the reagent role of the taq polymerase is realized. In an assay to evaluate the quality of the taq polymerase itself, the evaluant/study subject role of the taq is realized, but not the reagent role since the taq is the subject about which data is generated.

In regard to the statement that reagents are 'distinct' from the specified outputs of a technique, note that a reagent may be incorporated into a material output of a technique, as long as the IDENTITY of this output is distinct from that of the bearer of the reagent role. For example, dNTPs input into a PCR are reagents that become part of the material output of this technique, but this output has a new identity (ie that of a 'nucleic acid molecule') that is distinct from the identity of the dNTPs that comprise it. Similarly, a biotin molecule input into a cell labeling technique are reagents that become part of the specified output, but the identity of the output is that of some modified cell specimen which shares identity with the input unmodified cell specimen, and not with the biotin label. Thus, we see that an important criteria of 'reagent-ness' is that it is a facilitator, and not the primary focus of an investigation or material processing technique (ie not the specified subject/evaluant about which knowledge is sought, or the specified output material of the technique).
Super-classes obo:BFO_0000023c
Sub-classes obo:OBI_0002743c

patient rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000093
Super-classes obo:BFO_0000023c
Restrictions obo:RO_0000052op some obo:NCBITaxon_9606c

material processingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000094
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000293op only obo:BFO_0000040c
obo:OBI_0000299op some obo:OBI_0000047c
Sub-classes obo:OBI_0600014c
obo:OBI_0302887c
obo:OBI_0600036c
obo:OBI_0002095c
obo:OMIABIS_0000911c
obo:OBI_0000457c
obo:OBI_0600038c
obo:ERO_0000905c
obo:OBI_0000652c

participant under investigation rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000097
Super-classes obo:BFO_0000023c
Restrictions obo:BFO_0000054op only obo:OBI_0000471c

responsible party rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000102
Super-classes obo:OBI_0000202c
Sub-classes obo:OBI_0000103c

principal investigator rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000103
Super-classes obo:OBI_0000102c

specimen rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000112
Super-classes obo:BFO_0000023c
Restrictions obo:RO_0000052op some (obo:BFO_0000040c and ub385bL10575C17c)
Sub-classes obo:OBI_0000740c

worker rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000116
Super-classes obo:OBI_0000202c
Sub-classes obo:OBIB_0000012c
obo:OBIB_0000023c

filter paperc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000151
Super-classes obo:OBI_0000932c
Restrictions obo:RO_0000085op some obo:OBI_0000378c

populationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000181
Super-classes obo:BFO_0000040c
Sub-classes obo:NCIT_C126535c
obo:NCIT_C126528c
obo:NCIT_C43851c
obo:NCIT_C126536c
obo:NCIT_C77811c
obo:NCIT_C126533c
obo:NCIT_C77820c
obo:NCIT_C126538c
obo:NCIT_C126529c
obo:NCIT_C126534c
efo:EFO_0001799c
obo:NCIT_C41263c
obo:NCIT_C126530c

investigation agent rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000202
Description

Philly2013: Historically, this role would have been borne only by humans or organizations. However, we now also want to enable investigations run by robot scientists such as ADAM (King et al, Science, 2009)
Super-classes obo:BFO_0000023c
Restrictions obo:BFO_0000054op only obo:OBI_0000066c
Sub-classes obo:OBI_0000116c
obo:OBI_0000102c

organizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000245
Super-classes obo:BFO_0000040c
Sub-classes core:Laboratoryc
obo:OBI_0002190c
obo:OBI_0002198c
obo:OBIB_0000085c
obo:GEO_000000400c
obo:OMIABIS_0000017c
obo:OMIABIS_0000010c
In domain of obo:OBI_0001688op
In range of obo:OBI_0000846op
Members obo:OBI_0001860
obo:OBI_0000779
obo:OBI_0000757
obo:OBI_0000758
obo:OBI_0001338
obo:OBI_0001224
obo:OBI_0002193
obo:OBI_0001287
obo:OBI_0001372
obo:OBI_0000756
obo:OBI_0001855
obo:OBI_0001213
obo:OBI_0000769
obo:OBI_0000765
obo:OBI_0000829
obo:OBI_0000759
obo:OBI_0001424
obo:OBI_0001347
obo:OBI_0002755
obo:OBI_0001375
obo:OBI_0001355
obo:OBI_0001428
obo:OBI_0001321
obo:OBI_0000462
obo:OBI_0001312
obo:OBI_0000753
obo:OBI_0001434
obo:OBI_0000752
obo:OBI_0000901
obo:OBI_0000770
obo:OBI_0001856
obo:OBI_0000776
obo:OBI_0001340
obo:OBI_0001320
obo:OBI_0001431
obo:OBI_0001458
obo:OBI_0001443
obo:OBI_0000754

DNA extractionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000257
Super-classes obo:OBI_0666667c
Restrictions obo:OBI_0000299op some obo:CHEBI_16991c

planc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000260
Super-classes obo:BFO_0000017c

protocolc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000272
Super-classes obo:IAO_0000104c
Sub-classes obo:OBIB_0000322c
obo:OBIB_0000070c
obo:OBIB_0000339c
obo:OBIB_0000338c
obo:OBIB_0000340c
obo:OBIB_0000214c
obo:OBIB_0000305c
obo:OBIB_0000378c
obo:OBIB_0000075c
obo:OBIB_0000363c
obo:OBIB_0000377c
obo:OBIB_0000337c
obo:OBIB_0000165c
obo:OBIB_0000376c

adding a material entity into a targetc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000274
Super-classes obo:OBI_0000652c
Restrictions obo:BFO_0000055op some obo:OBI_0000319c
obo:BFO_0000055op some obo:OBI_0000444c
obo:OBI_0000299op some (obo:BFO_0000040c and ub385bL10784C17c and ub385bL10789C17c)
Sub-classes obo:OBIB_0000034c

analyte rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000275
Super-classes obo:OBI_0002444c
Restrictions obo:RO_0000081op some (obo:CHEBI_23367c or obo:CHEBI_33250c)

material to be added rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000319
Super-classes obo:BFO_0000023c
Sub-classes obo:OBIB_0000022c

drawing a conclusion based on datac # Classes

URI http://purl.obolibrary.org/obo/OBI_0000338
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000293op some obo:IAO_0000027c
obo:OBI_0000299op some obo:OBI_0001909c

planningc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000339
Super-classes (obo:BFO_0000015c and ub385bL10935C13c)
obo:BFO_0000015c

contain functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000370
Super-classes obo:BFO_0000034c
Sub-classes obo:OBI_0002087c

heat functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000371
Super-classes obo:BFO_0000034c

material separation functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000372
Super-classes obo:BFO_0000034c
Sub-classes obo:OBI_0000378c

filter functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000378
Super-classes obo:OBI_0000372c

mechanical functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000379
Super-classes obo:BFO_0000034c

transfer functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000383
Super-classes obo:BFO_0000034c

cool functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000387
Super-classes obo:BFO_0000034c

image acquisition functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000397
Super-classes obo:OBI_0000453c
Restrictions obo:RO_0000052op some obo:OBI_0000398c
obo:BFO_0000054op only obo:OBI_0001007c

image creation devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000398
Super-classes obo:OBI_0000832c
Sub-classes obo:OBI_0000982c

solid support functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000399
Super-classes obo:BFO_0000034c

environment control functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000401
Super-classes obo:BFO_0000034c

extractc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000423
Super-classes obo:OBI_0000047c
Restrictions obo:OBI_0000312op some obo:OBI_0302884c
Sub-classes obo:OBI_0001010c

averaging objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000425
Super-classes obo:OBI_0200166c

adding material objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000434
Super-classes obo:OBI_0000686c

needlec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000436
Super-classes obo:OBI_0000968c
Restrictions obo:RO_0000085op some obo:OBI_0000383c
Sub-classes obo:OBI_0002679c

analyte measurement objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000437
Super-classes obo:OBI_0000441c

assay objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000441
Super-classes obo:IAO_0000005c
Sub-classes obo:OBI_0000437c

analyte assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000443
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000417op some obo:OBI_0000437c
obo:OBI_0000299op some obo:IAO_0000109c
Sub-classes obo:OBI_0002155c
obo:OBI_0002145c
obo:OBI_0002157c
obo:OBI_0002158c
obo:OBI_0002159c
obo:OBI_0002156c

target of material addition rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000444
Super-classes obo:BFO_0000023c
Restrictions obo:RO_0000052op some obo:BFO_0000040c
obo:BFO_0000054op only obo:OBI_0000274c

measure functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000453
Super-classes obo:BFO_0000034c
Restrictions obo:BFO_0000054op only ()
obo:RO_0000079op some obo:OBI_0000047c
Sub-classes obo:OBI_0000397c

material transformation objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000456
Super-classes obo:IAO_0000005c
Sub-classes obo:OBI_0000639c
obo:OBI_0000686c
obo:OBI_0000458c

manufacturingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000457
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000293op some obo:BFO_0000040c
obo:OBI_0000299op some obo:OBI_0000047c

manufacturing objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000458
Super-classes obo:OBI_0000456c

study design executionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000471
Super-classes obo:OBI_0000011c
Sub-classes obo:OMIABIS_0001014c

manufacturer rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000571
Super-classes obo:BFO_0000023c
Restrictions obo:BFO_0000054op only obo:OBI_0000457c
obo:RO_0000052op some (obo:NCBITaxon_9606c or obo:OBI_0000245c)

material separation objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000639
Super-classes obo:OBI_0000456c
Sub-classes obo:OBI_0000678c
obo:OBI_0000681c

urine specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000651
Super-classes obo:OBI_0001479c
Restrictions obo:RO_0000087op some obo:OBI_0000112c
obo:RO_0001000op some obo:UBERON_0001088c
obo:OBI_0000312op some obo:OBI_0600005c

material combinationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000652
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000293op some obo:BFO_0000040c
obo:OBI_0000299op some obo:BFO_0000040c
Sub-classes obo:OBI_0000274c
obo:OBI_0600016c

blood specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000655
Super-classes obo:OBI_2000009c
Restrictions obo:RO_0000087op some obo:OBI_0000112c
obo:RO_0001000op some obo:UBERON_0000178c
obo:OBI_0000312op some obo:OBI_0600005c
Sub-classes obo:OBIB_0000039c

specimen collection processc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000659
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000299op some obo:OBI_0100051c
obo:OBI_0000293op some obo:BFO_0000040c
Sub-classes obo:OBI_0002600c
obo:OBI_0600005c

sample from organismc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000671
Super-classes obo:OBI_0000747c
obo:OBI_0001479c
Restrictions obo:RO_0001000op some obo:UBERON_0000465c

portioning objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000678
Super-classes obo:OBI_0000639c

average valuec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000679
Super-classes obo:IAO_0000027c
Sub-classes obo:OMIABIS_0001001c
obo:OBIB_0000042c

separation into different composition objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000681
Super-classes obo:OBI_0000639c

specimen collection objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000684
Super-classes obo:IAO_0000005c

material combination objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000686
Super-classes obo:OBI_0000456c
Sub-classes obo:OBI_0000434c

material sample rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000740
Super-classes obo:OBI_0000112c

material samplec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000747
Super-classes obo:OBI_0100051c
Sub-classes obo:OBI_0000671c

material maintenance objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000806
Super-classes obo:IAO_0000005c

informed consent processc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000810
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000293op some obo:NCBITaxon_9606c
obo:RO_0000057op some ()

measurement devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000832
Super-classes obo:OBI_0000968c
Sub-classes obo:OBI_0400106c
obo:OBI_0000398c

manufacturerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000835
Super-classes obo:BFO_0000040c
Sub-classes obo:OBIB_0000216c
obo:OBIB_0000218c
obo:OBIB_0000217c

test tubec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000836
Super-classes obo:OBI_0000967c
Restrictions obo:RO_0000085op some obo:OBI_0000370c

material maintenancec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000838
Super-classes obo:OBI_0000011c
Sub-classes obo:OBI_0600024c
obo:OBI_0302893c

record of missing knowledgec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000852
Super-classes obo:IAO_0000030c

pre-mortem specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000873
Super-classes obo:OBI_0001506c

RNA extractc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000880
Super-classes obo:OBI_0001010c
Restrictions obo:OBI_0000643op some obo:CHEBI_33697c
obo:OBI_0000312op some obo:OBI_0666666c

freezing storagec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000915
Super-classes (ub385bL11938C29c and ub385bL11952C13c)
obo:OBI_0302893c
Restrictions obo:OBI_0000417op some obo:OBI_0000806c
Sub-classes obo:OMIABIS_0001045c

nasal swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000917
Super-classes obo:OBI_0002599c
Restrictions obo:RO_0000087op some obo:OBI_0000112c
obo:OBI_0000312op some obo:OBI_0002600c

frozen specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000922
Super-classes obo:OBI_0001472c
Sub-classes obo:OMIABIS_0000055c
obo:OMIABIS_0000053c
obo:OMIABIS_0000056c

lyophilization storagec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000927
Description

can link to freezing-dying equipment, such as freeze-dryer, rotary evaporator, if needed
Super-classes obo:OBI_0302893c
Restrictions obo:OBI_0000417op some obo:OBI_0000806c
obo:OBI_0000293op some obo:BFO_0000040c

material separation devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000932
Super-classes obo:OBI_0000968c
Sub-classes obo:OBI_0000151c
obo:OBI_0400106c
obo:OBI_0400168c

service consumer rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000941
Super-classes obo:BFO_0000023c
Restrictions obo:RO_0000052op some (obo:NCBITaxon_9606c or obo:OBI_0000245c)

service provider rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000947
Super-classes obo:BFO_0000023c
Restrictions obo:BFO_0000054op only obo:OBI_0000011c
obo:RO_0000052op some (obo:NCBITaxon_9606c or obo:OBI_0000245c)
Sub-classes obo:OBI_0000018c

paraffin specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000950
Super-classes obo:OBI_0001472c
Sub-classes obo:OBI_1200000c

processed specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000953
Description

A tissue sample that has been sliced and stained for a histology study.
Super-classes obo:OBI_0100051c
obo:OBI_0000047c
Sub-classes obo:OBI_0100067c
obo:OBIB_0000039c
obo:OBI_0100016c
obo:OBI_0302716c
obo:OBI_0001010c
obo:OBIB_0000036c
obo:OMIABIS_0000050c
obo:OBI_0100017c

reagent application functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000960
Super-classes obo:BFO_0000034c

lyophilized specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000965
Super-classes obo:OBI_0001472c

containerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000967
Super-classes obo:OBI_0000968c
Restrictions obo:OBIB_0000038op some obo:IAO_0000109c
obo:OBIB_0000037op some obo:IAO_0000109c
Sub-classes obo:OBI_0000836c
obo:OBIB_0000016c
obo:OBI_0002088c
obo:OBIB_0000030c
obo:OBIB_0000031c
obo:OBIB_0000049c
obo:OBIB_0000013c
obo:OBIB_0000014c
obo:ERO_0000979c
obo:OBIB_0000032c
obo:OBI_0002089c
In domain of obo:OBIB_0000037op
obo:OBIB_0000038op

devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000968
Super-classes obo:OBI_0000047c
Restrictions obo:RO_0000085op some obo:BFO_0000034c
obo:OBI_0000312op some obo:OBI_0000094c
Sub-classes obo:OBI_0002195c
obo:OBI_0000967c
obo:OBI_0000832c
obo:OBI_0001064c
obo:OBI_0001034c
obo:OBI_0000932c
obo:OBIB_0000015c
obo:OBI_0000436c
obo:OBIB_0000010c
obo:ERO_0001092c

fresh specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000971
Super-classes obo:OBI_0001472c
Sub-classes obo:OMIABIS_0000054c

paraffin storagec # Classes

URI http://purl.obolibrary.org/obo/OBI_0000977
Description

need to specify paraffin or wax is one of specified input of the process
Super-classes obo:OBI_0302893c
Restrictions obo:OBI_0000293op some (obo:OBI_0100026c or obo:UBERON_0000465c)
obo:OBI_0000417op some obo:OBI_0000806c

agar stab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000981
Super-classes obo:OBI_0001472c

computed tomography scannerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0000982
Super-classes obo:OBI_0000398c
Restrictions obo:RO_0000085op some obo:OBI_0000397c

questionnairec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001000
Super-classes obo:IAO_0000310c
Sub-classes obo:OBIB_0000017c
obo:OBIB_0000020c
Members obo:OBI_0001004

agar stab storagec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001003
Description

need to specify that agar is one of input for this process
Super-classes obo:OBI_0302893c
Restrictions obo:OBI_0000417op some obo:OBI_0000806c
obo:OBI_0000293op some obo:OBI_0100060c

image creationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001007
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000293op some obo:BFO_0000040c
obo:OBI_0000299op some obo:IAO_0000101c

nucleic acid extractc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001010
Super-classes (ub385bL12427C29c and ub385bL12432C13c)
obo:OBI_0000423c
obo:OBI_0000953c
Restrictions obo:OBI_0000643op some obo:CHEBI_33696c
Sub-classes obo:OBI_0000880c
obo:OBI_0001051c

environmental control devicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001034
Super-classes obo:OBI_0000968c
Sub-classes obo:OBI_0002089c

DNA extractc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001051
Super-classes obo:OBI_0001010c
Restrictions obo:OBI_0000312op some obo:OBI_0000257c
obo:OBI_0000643op some obo:CHEBI_16991c

automatic tissue processorc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001064
Super-classes obo:OBI_0000968c
Restrictions obo:RO_0000085op some obo:OBI_0000379c
obo:RO_0000085op some obo:OBI_0000960c
Sub-classes obo:OBI_0002192c

age since planting measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001156
Super-classes obo:OBI_0001167c

age since hatching measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001157
Super-classes obo:OBI_0001167c

age since egg laying measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001159
Super-classes obo:OBI_0001167c

age since germination measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001161
Super-classes obo:OBI_0001167c

age since eclosion measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001163
Super-classes obo:OBI_0001167c

age since sowing measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001164
Super-classes obo:OBI_0001167c

age since coitus measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001165
Super-classes obo:OBI_0001167c

age measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001167
Super-classes obo:IAO_0000416c
Restrictions obo:IAO_0000221op some obo:PATO_0000011c
Sub-classes obo:OBI_0002396c
obo:OBI_0001164c
obo:OBI_0001161c
obo:OBI_0001165c
obo:OBI_0001168c
obo:OBI_0001163c
obo:OBI_0001159c
obo:OBI_0002465c
obo:OBI_0001169c
obo:OBIB_0000485c
obo:OBI_0001156c
obo:OBI_0001157c

age since fertilization measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001168
Super-classes obo:OBI_0001167c

age since birth measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001169
Super-classes obo:OBI_0001167c

servicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001173
Super-classes obo:OBI_0000011c
Restrictions obo:BFO_0000051op some obo:OBI_0000011c
Sub-classes obo:OBI_0001528c
In domain of obo:OBI_0000107op

genetic characteristics informationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001404
Super-classes obo:IAO_0000027c
Restrictions obo:IAO_0000136op some (obo:SO_0000001c and ub385bL12842C17c)

specimen with known storage statec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001472
Super-classes obo:OBI_0100051c
Sub-classes obo:OBI_0000965c
obo:OBI_0000922c
obo:OBI_0000981c
obo:OBI_0000950c
obo:OBI_0000971c

specimen from organismc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001479
Super-classes obo:OBI_0100051c
Sub-classes obo:OBI_0002522c
obo:OBI_0002530c
obo:OBI_0002542c
obo:OBI_0002547c
obo:OBI_0002512c
obo:OBI_0002546c
obo:OBI_0002500c
obo:OBI_0002519c
obo:OBI_0002552c
obo:OBI_0002504c
obo:OBI_2000004c
obo:OBI_0002540c
obo:OBI_0002535c
obo:OBI_2000007c
obo:OBI_0002543c
obo:OBI_2000001c
obo:OBI_2000008c
obo:OBI_0002503c
obo:OBI_0002538c
obo:OBI_0002517c
obo:OBI_0002532c
obo:OBI_0002516c
obo:OBI_0002541c
obo:OBI_0002533c
obo:OBI_0002529c
obo:OBI_0002511c
obo:OBI_0002536c
obo:OBI_0002554c
obo:OBI_0002507c
obo:OBI_0002513c
obo:OBI_0002553c
obo:OBI_0002550c
obo:OBI_0002537c
obo:OBI_0002508c
obo:OBI_0002527c
obo:OBI_0002525c
obo:OBI_0002545c
obo:OBI_2000003c
obo:OBIB_0000086c
obo:OBI_0002528c
obo:OBI_0000651c
obo:OBI_0002548c
obo:OBI_0002531c
obo:OBI_2000010c
obo:OBI_0002523c
obo:OBI_0002526c
obo:OBI_0002521c
obo:OBI_0002524c
obo:OBI_0002549c
obo:OBI_0002518c
obo:OBI_2000000c
obo:OBI_2000005c
obo:OBI_0002539c
obo:OBI_2000006c
obo:OBI_2000009c
obo:OBI_0002534c
obo:OBI_0002520c
obo:OBI_0000671c
obo:OBI_0002544c

specimen with pre- or post-mortem statusc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001506
Super-classes obo:OBI_0100051c
Sub-classes obo:OBI_0000873c

material servicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001528
Super-classes obo:OBI_0001173c
Sub-classes obo:OBI_0001547c
obo:OBI_0001580c

material analysis servicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001547
Super-classes obo:OBI_0001528c

material transport servicec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001580
Super-classes obo:OBI_0001528c

specimen collection time measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001619
Source NIAID GSCID-BRC
Super-classes obo:IAO_0000416c
Restrictions obo:IAO_0000136op some (obo:BFO_0000035c and ub385bL13119C17c)

selection criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001755
Super-classes obo:IAO_0000033c
Sub-classes obo:OBI_0500026c

secondary cultured cellc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001866
Description

A secondary cultured cell has been passaged in culture or is a descendant of such a cell that is derived through propagation in culture.
Super-classes obo:CL_0000010c
(ub385bL13227C22c or ub385bL13232C13c)
Restrictions obo:RO_0001000op some obo:CL_0000001c
Sub-classes obo:CLO_0000001c

establishing cell linec # Classes

URI http://purl.obolibrary.org/obo/OBI_0001867
Super-classes obo:OBI_0600036c
Restrictions obo:OBI_0000299op some obo:CLO_0000031c

reagentc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001879
Description

(copied from ReO) Reagents are distinguished from devices/instruments that also serve as facilitators in scientific techniques by the fact that reagents are chemical or biological in nature and necessarily participate in or have parts that participate in some chemical interaction or reaction during their intended participation in some technique. By contrast, devices do not participate in a chemical reaction/interaction during the technique.

Reagents are distinguished from study subjects/evaluants in that study subjects and evaluants are that about which conclusions are drawn and knowledge is sought in an investigation - while reagents, by definition, are not. It should be noted, however, that reagent and study subject/evaluant roles can be borne by instances of the same type of material entity - but a given instance can only realize one of these roles in the execution of a given assay. For example, taq polymerase can bear a reagent role or an evaluant role. In a DNA sequencing assay aimed at generating sequence data about some plasmid, the reagent role of the taq polymerase is realized. In an assay to evaluate the quality of the taq polymerase itself, the evaluant/study subject role of the taq is realized, but not the reagent role since the taq is the subject about which data is generated.

In regard to the statement that reagents are 'distinct' from the specified outputs of a technique: note that a reagent may be incorporated into a material output of a technique, as long as the IDENTITY of this output is distinct from that of the bearer of the reagent role. For example, dNTPs input into a PCR are reagents that become part of the material output of this technique, but this output has a new identity (ie that of a 'nucleic acid molecule') that is distinct from the identity of the dNTPs that comprise it. Similarly, a biotin molecule input into a cell labeling technique are reagents that become part of the specified output, but the identity of the output is that of some modified cell specimen which shares identity with the input unmodified cell specimen, and not with the biotin label. Thus, we see that an important criteria of 'reagent-ness' is that it is a facilitator, and not the primary focus of an investigation or material processing technique (ie not the specified subject/evaluant about which knowledge is sought, or the specified output material of the technique).
Super-classes obo:OBI_0000047c
Restrictions obo:OBI_0000312op some obo:OBI_0000094c
Sub-classes obo:OBI_0002744c

secondary cultured cell populationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001905
Description

The concept of a 'secondary cultured cell population' covers cell lines as well as cultured cell populations more immediately derived from a primary culture which have yet to achieve adequate genetic stability and compositional homogeneity to be considered a cell line. The extent of the collection of cells in a 'secondary cultured cell population' is restricted only in that all cell members must share a propagation history (ie be derived through a common lineage of passages from an initial culture). Secondary cultured cell populations can be under active culture, stored in a quiescent state for future use, or applied experimentally.
Super-classes obo:OBI_0100060c
Restrictions obo:OBI_0000643op some obo:OBI_0001866c
obo:OBI_0000312op some obo:OBI_0600037c
obo:OBI_0000643op only obo:OBI_0001866c
Sub-classes obo:CLO_0000031c

conclusion based on datac # Classes

URI http://purl.obolibrary.org/obo/OBI_0001909
Super-classes obo:IAO_0000030c
Restrictions obo:OBI_0000312op some obo:OBI_0000338c
obo:OBI_0000124op some obo:IAO_0000027c
Sub-classes obo:IAO_0000144c
In domain of obo:OBI_0000124op

cell freezing mediumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001912
Super-classes obo:OBI_0000047c

selectionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001928
Super-classes obo:OBI_0000011c
Sub-classes obo:OBI_0600004c

categorical value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001930
Super-classes obo:OBI_0001933c
Sub-classes obo:OBI_0002243c
obo:OBIB_0000087c
obo:OBI_0002270c
obo:OBI_0002224c
obo:OBI_0002314c
obo:OBI_0002284c
obo:OBI_0002232c
obo:OBI_0002256c
obo:OBI_0002215c
obo:OBI_0002310c
obo:OBI_0002287c
obo:OBI_0002290c
obo:OBI_0002326c
obo:OBIB_0000347c
obo:OBI_0002279c
obo:OBI_0002341c
obo:OBI_0002356c
obo:OBI_0002210c
obo:OBI_0002205c
obo:OBI_0002298c
obo:OBI_0002306c

scalar value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001931
Super-classes obo:OBI_0001933c
Restrictions obo:OBI_0001937dp min 1
obo:IAO_0000039op min 1

value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001933
Super-classes obo:IAO_0000030c
Sub-classes obo:OBI_0002138c
obo:OBI_0002137c
obo:OBI_0001931c
obo:OBI_0002557c
obo:OBI_0002139c
obo:OBI_0001930c
obo:OBI_0002556c
In domain of obo:OBI_0002135dp
obo:OBI_0001927op
obo:OBI_0001937dp
In range of obo:OBI_0001938op

molecular-labeled materialc # Classes

URI http://purl.obolibrary.org/obo/OBI_0001936
Super-classes obo:OBI_0000047c

specimen positionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002000
Super-classes obo:PATO_0000140c

specimen integrityc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002001
Super-classes obo:PATO_0001442c

specimen weightc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002002
Super-classes obo:IAO_0000414c

specimen slide IDc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002003
Super-classes obo:IAO_0020000c

surgical cancer treatmentc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002004
Super-classes obo:NCIT_C16212c

specimen gross appearance of metastatic tumorc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002005
Super-classes obo:OBIB_0000209c

specimen gross appearance of tumor centerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002006
Super-classes obo:OBIB_0000209c

specimen gross appearance of tumor edgec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002007
Super-classes obo:OBIB_0000209c

research authorization for post mortem specimen donation for a specific tissue or fluidc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002008
Super-classes obo:OBIB_0000459c

tissue specimen suitability for molecular analysisc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002013
Super-classes obo:IAO_0000144c

collection of specimensc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002076
Source Biobank
Super-classes obo:BFO_0000040c
Sub-classes obo:OBI_0002077c
obo:OMIABIS_0000033c

specimens derived from shared ancestorc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002077
Source Biobank
Super-classes obo:OBI_0002076c

containing a specimen functionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002087
Source Biobank
Super-classes obo:OBI_0000370c

specimen containerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002088
Super-classes obo:OBI_0000967c
Sub-classes obo:OBIB_0000234c
obo:OBIB_0000233c
obo:OBIB_0000235c

physical storec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002089
Super-classes obo:OBI_0001034c
obo:OBI_0000967c

specimen family creationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002095
Source Biobank
Super-classes (obo:OBI_0000094c and ub385bL13752C13c and ub385bL13757C13c)
obo:OBI_0000094c

IHC slide stainingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002123
Super-classes (obo:OBI_0302887c and ub385bL13776C13c)
obo:OBI_0302887c

H&E slide stainingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002124
Super-classes obo:OBI_0302887c
(obo:OBI_0302887c and ub385bL13795C13c)

H&E-stained fixed tissue slide specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002125
Super-classes obo:OMIABIS_0000052c
(obo:OMIABIS_0000052c and ub385bL13814C13c)

IHC-stained fixed tissue slide specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002126
Super-classes (obo:OMIABIS_0000052c and ub385bL13834C13c)
obo:OMIABIS_0000052c

RNA Integrity Number calculationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002136
Super-classes obo:OBI_0200000c
Restrictions obo:OBI_0000299op some (obo:IAO_0000109c and ub385bL13867C17c)

RNA Integrity Number value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002137
Super-classes obo:OBI_0001933c

temperature value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002138
Super-classes obo:OBI_0001933c
(ub385bL13897C29c and ub385bL13902C13c)

volume value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002139
Super-classes obo:OBI_0001933c
(ub385bL13920C29c and ub385bL13925C13c)

temperature measurement assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002140
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some (obo:IAO_0000109c and ub385bL13947C17c)
Sub-classes obo:OBIB_0000063c

volume measurement assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002141
Super-classes obo:OBI_0000070c
Restrictions obo:OBI_0000299op some (obo:IAO_0000109c and ub385bL13970C17c)

antigen specific antibodies assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002145
Super-classes obo:OBI_0000443c
Sub-classes obo:OBI_0002153c
obo:OBI_0002147c
obo:OBI_0002146c
obo:OBI_0002150c
obo:OBI_0002151c
obo:OBI_0002154c
obo:OBI_0002149c
obo:OBI_0002152c
obo:OBI_0002148c

HIV antibody assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002146
Super-classes obo:OBI_0002145c
(ub385bL14006C29c and ub385bL14034C13c)

HIV group O antibody assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002147
Super-classes obo:OBI_0002145c
(ub385bL14070C29c and ub385bL14099C13c)

surface HBV antibody assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002148
Super-classes (ub385bL14135C29c and ub385bL14158C13c)
obo:OBI_0002145c

core HBV antibody assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002149
Super-classes obo:OBI_0002145c
(ub385bL14188C29c and ub385bL14211C13c)

core HBV IgM antibody assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002150
Super-classes obo:OBI_0002145c
(ub385bL14241C29c and ub385bL14264C13c)

HCV antibody assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002151
Super-classes (ub385bL14294C29c and ub385bL14317C13c)
obo:OBI_0002145c

EBV IgG antibody assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002152
Super-classes (ub385bL14347C29c and ub385bL14370C13c)
obo:OBI_0002145c

EBV IgM antibody assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002153
Super-classes obo:OBI_0002145c
(ub385bL14400C29c and ub385bL14423C13c)

CMV antibody assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002154
Super-classes (ub385bL14453C29c and ub385bL14476C13c)
obo:OBI_0002145c

venereal disease research laboratory testc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002155
Super-classes obo:OBI_0000443c
(ub385bL14506C29c and ub385bL14520C13c)

rapid plasma reagin testc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002156
Super-classes (ub385bL14541C29c and ub385bL14555C13c)
obo:OBI_0000443c

HBV surface antigen assayc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002157
Super-classes obo:OBI_0000443c
(ub385bL14576C29c and ub385bL14590C13c)

HIV-1 nucleic acid testingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002158
Super-classes (ub385bL14611C29c and ub385bL14634C13c)
obo:OBI_0000443c

HCV nucleic acid testingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002159
Super-classes obo:OBI_0000443c
(ub385bL14664C29c and ub385bL14687C13c)

courier organizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002190
Super-classes obo:OBI_0000245c
Restrictions obo:RO_0000087op some (obo:OBI_0000947c and ub385bL14720C17c)

courier tracking numberc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002191
Super-classes obo:IAO_0000577c

Leica Peloris rapid tissue processorc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002192
Super-classes obo:OBI_0001064c

Microm Ergostar HM200c # Classes

URI http://purl.obolibrary.org/obo/OBI_0002194
Super-classes obo:OBI_0400168c

microtome bladec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002195
Super-classes obo:OBI_0000968c
Sub-classes obo:OBI_0002196c

Sakura Low profile Accu-Edge microtome bladec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002196
Super-classes obo:OBI_0002195c

tissue section thicknessc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002197
Super-classes obo:IAO_0000408c

molecular analysis facility organizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002198
Super-classes obo:OBI_0000245c

reason for lack of data itemc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002199
Super-classes obo:IAO_0000030c
Sub-classes obo:OBI_0002200c

cannot be assessed determinationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002200
Super-classes obo:OBI_0002199c
Sub-classes obo:OBI_0002203c
obo:OBI_0002204c
obo:OBI_0002202c

determination if assay will provide reliable resultsc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002201
Super-classes obo:OBI_0000011c

GXc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002202
Super-classes obo:OBI_0002200c

pTXc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002203
Super-classes obo:OBI_0002200c

pNXc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002204
Super-classes obo:OBI_0002200c

histologic grade according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002205
Super-classes obo:OBI_0001930c
Members obo:OBI_0002207
obo:OBI_0002209
obo:OBI_0002206
obo:OBI_0002208

histologic grade according to the Fuhrman Nuclear Grading Systemc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002210
Super-classes obo:OBI_0001930c
Members obo:OBI_0002211
obo:OBI_0002213
obo:OBI_0002214
obo:OBI_0002212

histologic grade for ovarian tumorc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002215
Super-classes obo:OBI_0001930c
Sub-classes obo:OBI_0002219c
obo:OBI_0002216c

histologic grade for ovarian tumor according to a two-tier grading systemc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002216
Super-classes obo:OBI_0002215c
Members obo:OBI_0002218
obo:OBI_0002217

histologic grade for ovarian tumor according to the World Health Organizationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002219
Super-classes obo:OBI_0002215c
Members obo:OBI_0002220
obo:OBI_0002221
obo:OBI_0002223
obo:OBI_0002222

pathologic primary tumor stage for colon and rectum according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002224
Super-classes obo:OBI_0001930c
Members obo:OBI_0002230
obo:OBI_0002227
obo:OBI_0002226
obo:OBI_0002231
obo:OBI_0002225
obo:OBI_0002228
obo:OBI_0002229

pathologic primary tumor stage for lung according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002232
Super-classes obo:OBI_0001930c
Members obo:OBI_0002242
obo:OBI_0002236
obo:OBI_0002240
obo:OBI_0002233
obo:OBI_0002234
obo:OBI_0002241
obo:OBI_0002239
obo:OBI_0002237
obo:OBI_0002238
obo:OBI_0002235

pathologic primary tumor stage for kidney according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002243
Super-classes obo:OBI_0001930c
Members obo:OBI_0002250
obo:OBI_0002249
obo:OBI_0002245
obo:OBI_0002255
obo:OBI_0002246
obo:OBI_0002244
obo:OBI_0002248
obo:OBI_0002254
obo:OBI_0002252
obo:OBI_0002253
obo:OBI_0002247
obo:OBI_0002251

pathologic primary tumor stage for ovary according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002256
Super-classes obo:OBI_0001930c
Members obo:OBI_0002269
obo:OBI_0002260
obo:OBI_0002258
obo:OBI_0002263
obo:OBI_0002262
obo:OBI_0002261
obo:OBI_0002259
obo:OBI_0002267
obo:OBI_0002268
obo:OBI_0002264
obo:OBI_0002265
obo:OBI_0002257
obo:OBI_0002266

pathologic lymph node stage for colon and rectum according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002270
Super-classes obo:OBI_0001930c
Members obo:OBI_0002272
obo:OBI_0002278
obo:OBI_0002277
obo:OBI_0002273
obo:OBI_0002276
obo:OBI_0002271
obo:OBI_0002274
obo:OBI_0002275

pathologic lymph node stage for lung according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002279
Super-classes obo:OBI_0001930c
Members obo:OBI_0002281
obo:OBI_0002283
obo:OBI_0002282
obo:OBI_0002280

pathologic lymph node stage for kidney according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002284
Super-classes obo:OBI_0001930c
Members obo:OBI_0002285
obo:OBI_0002286

pathologic lymph node stage for ovary according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002287
Super-classes obo:OBI_0001930c
Members obo:OBI_0002289
obo:OBI_0002288

pathologic distant metastases stage for colon according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002290
Super-classes obo:OBI_0001930c
Members obo:OBI_0002293
obo:OBI_0002294
obo:OBI_0002291
obo:OBI_0002297
obo:OBI_0002296
obo:OBI_0002292
obo:OBI_0002295

pathologic distant metastases stage for lung according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002298
Super-classes obo:OBI_0001930c
Members obo:OBI_0002305
obo:OBI_0002301
obo:OBI_0002303
obo:OBI_0002304
obo:OBI_0002300
obo:OBI_0002302
obo:OBI_0002299

pathologic distant metastases stage for kidney according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002306
Super-classes obo:OBI_0001930c
Members obo:OBI_0002307
obo:OBI_0002308
obo:OBI_0002309

pathologic distant metastases stage for ovary according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002310
Super-classes obo:OBI_0001930c
Members obo:OBI_0002313
obo:OBI_0002311
obo:OBI_0002312

clinical tumor stage group according to AJCC 7th editionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002314
Super-classes obo:OBI_0001930c
Members obo:OBI_0002319
obo:OBI_0002320
obo:OBI_0002324
obo:OBI_0002316
obo:OBI_0002325
obo:OBI_0002323
obo:OBI_0002315
obo:OBI_0002322
obo:OBI_0002321
obo:OBI_0002318
obo:OBI_0002317

International Federation of Gynecology and Obstetrics cervical cancer stage value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002326
Super-classes obo:OBI_0001930c
Members obo:OBI_0002331
obo:OBI_0002327
obo:OBI_0002333
obo:OBI_0002328
obo:OBI_0002339
obo:OBI_0002334
obo:OBI_0002329
obo:OBI_0002330
obo:OBI_0002338
obo:OBI_0002332
obo:OBI_0002336
obo:OBI_0002340
obo:OBI_0002337
obo:OBI_0002335

International Federation of Gynecology and Obstetrics ovarian cancer stage value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002341
Super-classes obo:OBI_0001930c
Members obo:OBI_0002343
obo:OBI_0002350
obo:OBI_0002346
obo:OBI_0002345
obo:OBI_0002353
obo:OBI_0002348
obo:OBI_0002351
obo:OBI_0002347
obo:OBI_0002354
obo:OBI_0002344
obo:OBI_0002349
obo:OBI_0002355
obo:OBI_0002352
obo:OBI_0002342

performance status value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002356
Super-classes obo:OBI_0001930c
Sub-classes obo:OBI_0002363c
obo:OBI_0002357c

Eastern Cooperative Oncology Group score value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002357
Super-classes obo:OBI_0002356c
Members obo:OBI_0002362
obo:OBI_0002361
obo:OBI_0002360
obo:OBI_0002358
obo:OBI_0002359

Karnofsky score vaue specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002363
Super-classes obo:OBI_0002356c
Members obo:OBI_0002364
obo:OBI_0002366
obo:OBI_0002367
obo:OBI_0002365

clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002368
Super-classes obo:OGMS_0000015c

clinical history devoid of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002369
Super-classes obo:OGMS_0000015c

unknown clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002370
Super-classes obo:OGMS_0000015c

diagnosis of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002371
Super-classes obo:OGMS_0000073c

family clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002372
Super-classes obo:OGMS_0000015c
Sub-classes obo:OBI_0002380c
obo:OBI_0002381c
obo:OBI_0002382c
obo:OBI_0002373c
obo:OBI_0002383c
obo:OBI_0002379c
obo:OBI_0002384c
obo:OBI_0002374c
obo:OBI_0002376c
obo:OBI_0002378c
obo:OBI_0002375c
obo:OBI_0002377c

aunt clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002373
Super-classes obo:OBI_0002372c

brother clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002374
Super-classes obo:OBI_0002372c

daughter clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002375
Super-classes obo:OBI_0002372c

father clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002376
Super-classes obo:OBI_0002372c

mother clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002377
Super-classes obo:OBI_0002372c

sister clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002378
Super-classes obo:OBI_0002372c

son clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002379
Super-classes obo:OBI_0002372c

uncle clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002380
Super-classes obo:OBI_0002372c

grandmother clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002381
Super-classes obo:OBI_0002372c

grandfather clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002382
Super-classes obo:OBI_0002372c

nephew clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002383
Super-classes obo:OBI_0002372c

niece clinical history of cancerc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002384
Super-classes obo:OBI_0002372c

diagnosis of infectious diseasec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002385
Super-classes obo:OGMS_0000073c
Sub-classes obo:OBI_0002388c
obo:OBI_0002386c
obo:OBI_0002387c

diagnosis of hepatitis Bc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002386
Super-classes obo:OBI_0002385c

diagnosis of hepatitis Cc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002387
Super-classes obo:OBI_0002385c

diagnosis of HIVc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002388
Super-classes obo:OBI_0002385c

clinical history of repeated HIV assaysc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002389
Super-classes obo:OGMS_0000015c

exposure to second hand smokec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002390
Super-classes obo:OGMS_0000015c
Sub-classes obo:OBI_0002391c
obo:OBI_0002392c

exposure to second hand smoke in household during childhoodc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002391
Super-classes obo:OBI_0002390c

exposure to second hand smoke in current householdc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002392
Super-classes obo:OBI_0002390c

pregnancy historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002393
Super-classes obo:OGMS_0000015c

number of pregnanciesc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002394
Super-classes obo:IAO_0000109c

number of live birthsc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002395
Super-classes obo:IAO_0000109c

age when gave birth to first childc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002396
Super-classes obo:OBI_0001167c

gynecologic surgery historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002397
Super-classes obo:OGMS_0000015c
Sub-classes obo:OBI_0002398c
obo:OBI_0002400c
obo:OBI_0002399c

hysterectomy historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002398
Super-classes obo:OBI_0002397c

unilateral oophorectomy historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002399
Super-classes obo:OBI_0002397c

neither hysterectomy nor oophorectomy historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002400
Super-classes obo:OBI_0002397c

hormonal birth control use historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002401
Super-classes obo:IAO_0000030c
Sub-classes obo:OBI_0002403c
obo:OBI_0002404c
obo:OBI_0002402c

hormonal birth control former use historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002402
Super-classes obo:OBI_0002401c

hormonal birth control current use historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002403
Super-classes obo:OBI_0002401c

no hormonal birth control use historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002404
Super-classes obo:OBI_0002401c

hormonal replacement therapy historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002405
Super-classes obo:OGMS_0000015c

delivery form for hormonal replacement therapyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002406
Super-classes obo:OBI_0000047c
Sub-classes obo:OBI_0002408c
obo:OBI_0002407c
obo:OBI_0002409c

pill delivery form for hormonal replacement therapyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002407
Super-classes obo:OBI_0002406c

patch delivery form for hormonal replacement therapyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002408
Super-classes obo:OBI_0002406c

cream delivery form for hormonal replacement therapyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002409
Super-classes obo:OBI_0002406c

menopausal statusc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002410
Super-classes obo:IAO_0000030c
Sub-classes obo:OBI_0002413c
obo:OBI_0002411c
obo:OBI_0002412c
obo:OBI_0002414c

indeterminate menopausal statusc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002411
Super-classes obo:OBI_0002410c

premenopausal statusc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002412
Super-classes obo:OBI_0002410c

perimenopausal statusc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002413
Super-classes obo:OBI_0002410c

postmenopausal statusc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002414
Super-classes obo:OBI_0002410c

exposure to environmental and workplace carcinogens historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002415
Super-classes obo:IAO_0000030c
Sub-classes obo:OBI_0002419c
obo:OBI_0002418c
obo:OBI_0002416c
obo:OBI_0002420c
obo:OBI_0002417c

exposure to arsenic historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002416
Super-classes obo:OBI_0002415c

exposure to asbestos historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002417
Super-classes obo:OBI_0002415c

exposure to diesel exhaust historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002418
Super-classes obo:OBI_0002415c

exposure to chromium historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002419
Super-classes obo:OBI_0002415c

exposure to silica historyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002420
Super-classes obo:OBI_0002415c

indicator of whether an inclusion criterion was metc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002421
Super-classes obo:IAO_0000030c

indicator of whether all inclusion criteria were metc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002422
Super-classes obo:IAO_0000030c

age of majority inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002423
Super-classes obo:OBI_0500027c

chemotherapy treatment exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002424
Super-classes obo:OBI_0500028c

radiation treatment exclusion criteriac # Classes

URI http://purl.obolibrary.org/obo/OBI_0002425
Super-classes obo:OBI_0500028c

chemotherapy treatment within the recent past exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002426
Super-classes obo:OBI_0500028c

radiation treatment within the recent past exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002427
Super-classes obo:OBI_0500028c

BMI range inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002428
Super-classes obo:OBI_0500027c

blood transfusion exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002429
Super-classes obo:OBI_0500028c

history of metastatic cancer exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002430
Super-classes obo:OBI_0500028c

intravenous drug use exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002431
Super-classes obo:OBI_0500028c

history of sex with someone with a history of blood borne infection exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002432
Super-classes obo:OBI_0500028c

history of sex with someone with a history of intravenous drugs exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002433
Super-classes obo:OBI_0500028c

HIV exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002434
Super-classes obo:OBI_0500028c

exposure to blood borne infectious disease exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002435
Super-classes obo:OBI_0500028c

measurand rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002444
Super-classes obo:BFO_0000023c
Restrictions obo:RO_0000081op some obo:BFO_0000040c
Sub-classes obo:OBI_0000275c

health status inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002453
Super-classes obo:OBI_0500027c

clinically relevant lifestyle inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002454
Super-classes obo:OBI_0500027c

clinically relevant exposure inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002455
Super-classes obo:OBI_0500027c

gravidity inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002456
Super-classes obo:OBI_0500027c

defined population inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002460
Super-classes obo:OBI_0500027c

age since culture seeding measurement datumc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002465
Super-classes obo:OBI_0001167c

amniotic fluid specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002500
Super-classes obo:OBI_0001479c

bile specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002501
Super-classes obo:OBI_2000009c

cerebrospinal fluid specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002502
Super-classes obo:OBI_2000009c

feces specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002503
Super-classes obo:OBI_0001479c
Sub-classes obo:OBI_2000011c

digestive system fluid or secretion specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002504
Super-classes obo:OBI_0001479c

milk specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002505
Super-classes obo:OBI_2000009c

pericardial fluid specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002506
Super-classes obo:OBI_2000009c

saliva specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002507
Super-classes obo:OBI_0001479c

sputum specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002508
Super-classes obo:OBI_0001479c
Sub-classes obo:OBI_0002746c

sweat specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002509
Super-classes obo:OBI_2000009c

synovial fluid specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002510
Super-classes obo:OBI_2000009c

vitreous humor specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002511
Super-classes obo:OBI_0001479c

bone marrow specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002512
Super-classes obo:OBI_0001479c

placenta specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002513
Super-classes obo:OBI_0001479c

peritoneal fluid specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002514
Super-classes obo:OBI_2000009c

pleural fluid specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002515
Super-classes obo:OBI_2000009c

brain specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002516
Super-classes obo:OBI_0001479c

hair specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002517
Super-classes obo:OBI_0001479c

prostate gland specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002518
Super-classes obo:OBI_0001479c

skeletal muscle tissue specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002519
Super-classes obo:OBI_0001479c

heart specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002520
Super-classes obo:OBI_0001479c

renal medulla specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002521
Super-classes obo:OBI_0001479c

adrenal gland specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002522
Super-classes obo:OBI_0001479c

breast specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002523
Super-classes obo:OBI_0001479c

urinary bladder specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002524
Super-classes obo:OBI_0001479c

tibial artery specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002525
Super-classes obo:OBI_0001479c

skin of body specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002526
Super-classes obo:OBI_0001479c
Sub-classes obo:OBI_0002551c

pancreas specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002527
Super-classes obo:OBI_0001479c

stomach specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002528
Super-classes obo:OBI_0001479c

pituitary gland specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002529
Super-classes obo:OBI_0001479c

adipose tissue specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002530
Super-classes obo:OBI_0001479c

cortex of kidney specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002531
Super-classes obo:OBI_0001479c

esophagus mucosa specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002532
Super-classes obo:OBI_0001479c

colon specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002533
Super-classes obo:OBI_0001479c

lung specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002534
Super-classes obo:OBI_0001479c

esophagus muscularis mucosa specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002535
Super-classes obo:OBI_0001479c

cerebral cortex specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002536
Super-classes obo:OBI_0001479c

thyroid gland specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002537
Super-classes obo:OBI_0001479c

cerebellum specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002538
Super-classes obo:OBI_0001479c

tibial nerve specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002539
Super-classes obo:OBI_0001479c

coronary artery specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002540
Super-classes obo:OBI_0001479c

spleen specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002541
Super-classes obo:OBI_0001479c

aorta specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002542
Super-classes obo:OBI_0001479c

atrial appendage specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002543
Super-classes obo:OBI_0001479c

esophagogastric junction specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002544
Super-classes obo:OBI_0001479c

ileum specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002545
Super-classes obo:OBI_0001479c

liver specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002546
Super-classes obo:OBI_0001479c

minor salivary gland specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002547
Super-classes obo:OBI_0001479c

omentum specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002548
Super-classes obo:OBI_0001479c

ovary specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002549
Super-classes obo:OBI_0001479c

sigmoid colon specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002550
Super-classes obo:OBI_0001479c

suprapubic skin specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002551
Super-classes obo:OBI_0002526c

testis specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002552
Super-classes obo:OBI_0001479c

uterus specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002553
Super-classes obo:OBI_0001479c

vagina specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002554
Super-classes obo:OBI_0001479c

age group inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002555
Super-classes obo:OBI_0500027c
(ub385bL19093C29c and ub385bL19098C13c)

minimum age value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002556
Super-classes obo:OBI_0001933c

maximum age value specificationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002557
Super-classes obo:OBI_0001933c

use of medication inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002558
Super-classes obo:OBI_0500027c

hospital patient inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002559
Super-classes obo:OBI_0500027c

family status inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002560
Super-classes obo:OBI_0500027c

sex inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002561
Super-classes obo:OBI_0500027c

country of residence inclusion criteriac # Classes

URI http://purl.obolibrary.org/obo/OBI_0002562
Super-classes obo:OBI_0500027c

ethnicity inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002563
Super-classes obo:OBI_0500027c

swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002599
Super-classes obo:OBI_0100051c
Sub-classes obo:OBI_0002609c
obo:OBI_2000018c
obo:OBI_0002611c
obo:OBI_0002608c
obo:OBI_0002605c
obo:OBI_0002612c
obo:OBI_0002606c
obo:OBI_0002604c
obo:OBI_0002603c
obo:OBI_0002610c
obo:OBI_2000016c
obo:OBI_2000017c
obo:OBI_0000917c
obo:OBI_0002613c
obo:OBI_0002607c

collecting specimen with swabc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002600
Super-classes obo:OBI_0000659c

areolar swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002603
Super-classes obo:OBI_0002599c

breast swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002604
Super-classes obo:OBI_0002599c

cheek swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002605
Super-classes obo:OBI_0002599c

nasopharyngeal swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002606
Super-classes obo:OBI_0002599c

oral swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002607
Super-classes obo:OBI_0002599c

oropharyngeal swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002608
Super-classes obo:OBI_0002599c

rectal swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002609
Super-classes obo:OBI_0002599c

tongue swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002610
Super-classes obo:OBI_0002599c

vagina swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002611
Super-classes obo:OBI_0002599c

fecal swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002612
Super-classes obo:OBI_0002599c

environmental swab specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002613
Super-classes obo:OBI_0002599c

birth cohort study designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002614
Super-classes obo:OMIABIS_0001020c

disease specific study designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002615
Super-classes obo:OBI_0500000c

genealogical recordc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002616
Super-classes obo:IAO_0000310c

national registryc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002617
Super-classes obo:IAO_0000030c
Sub-classes obo:OBI_0002618c

national biomedical registryc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002618
Super-classes obo:OBI_0002617c

biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002650
Super-classes obo:OBI_0600005c
Restrictions obo:OBI_0000299op some obo:OBI_0000873c
obo:OBI_0000293op some obo:UBERON_0000465c
obo:OBI_0000293op some obo:OBI_0000968c
Sub-classes obo:OBIB_0000174c
obo:OBI_0002661c
obo:OBIB_0000184c
obo:OBI_0002660c
obo:OBI_0002657c
obo:OBI_0002654c
obo:OBI_0002662c
obo:OBI_0002663c
obo:OBIB_0000173c
obo:OBIB_0000185c

image guided biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002651
Super-classes obo:OBI_0002654c
Sub-classes obo:OBI_0002652c
obo:OBI_0002653c

computed tomography assisted biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002652
Super-classes obo:OBI_0002651c
Restrictions obo:OBI_0000293op some obo:OBI_0000982c

ultrasound-guided needle biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002653
Super-classes obo:OBI_0002651c

needle biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002654
Super-classes obo:OBI_0002650c
Restrictions obo:OBI_0000293op some obo:OBI_0000436c
Sub-classes obo:OBI_0002656c
obo:OBI_0002655c
obo:OBI_0002651c
obo:OBI_0002745c

fine needle aspiration biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002655
Super-classes obo:OBI_0002654c

core needle biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002656
Super-classes obo:OBI_0002654c

surgical biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002657
Super-classes obo:OBI_0002650c

abdominal wall fat pad biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002660
Super-classes obo:OBI_0002650c
Restrictions obo:OBI_0000293op some obo:UBERON_0010414c

tail biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002661
Super-classes obo:OBI_0002650c
Restrictions obo:OBI_0000293op some obo:UBERON_0002415c

bone marrow biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002662
Super-classes obo:OBI_0002650c
Restrictions obo:OBI_0000293op some obo:UBERON_0002371c

skinpunch biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002663
Super-classes obo:OBI_0002650c
Restrictions obo:OBI_0000293op some obo:UBERON_0002199c

vacuum-assisted biopsy needlec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002679
Super-classes obo:OBI_0000436c
Restrictions obo:RO_0000085op some obo:OBI_0000383c

molecular label rolec # Classes

URI http://purl.obolibrary.org/obo/OBI_0002743
Super-classes obo:OBI_0000086c

molecular labelc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002744
Super-classes obo:CHEBI_23367c
obo:OBI_0001879c

vacuum-assisted biopsyc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002745
Super-classes obo:OBI_0002654c
Restrictions obo:OBI_0000293op some obo:OBI_0002679c

induced sputum specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002746
Super-classes obo:OBI_0002508c
(obo:OBI_0100051c and ub385bL19888C13c and ub385bL19893C13c)

platelet-poor plasma specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002774
Super-classes obo:OBI_0100016c

platelet-poor plasma preparation processc # Classes

URI http://purl.obolibrary.org/obo/OBI_0002775
Super-classes obo:OBI_0600014c

blood plasma specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0100016
Super-classes obo:OBI_0000953c
(obo:BFO_0000040c and ub385bL19946C13c)
Restrictions obo:OBI_0000312op some (obo:OBI_0600014c and ub385bL19958C17c)
Sub-classes obo:OBI_0002774c

blood serum specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0100017
Super-classes obo:OBI_0000953c
Restrictions obo:OBI_0000312op some (ub385bL19981C33c and ub385bL19988C17c)
obo:RO_0000087op some obo:OBI_0000112c

organismc # Classes

URI http://purl.obolibrary.org/obo/OBI_0100026
Super-classes obo:BFO_0000040c
Sub-classes obo:IDO_0000456c
obo:NCBITaxon_2c
obo:NCBITaxon_2759c
obo:NCBITaxon_10239c
obo:NCBITaxon_2157c

specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_0100051
Super-classes obo:BFO_0000040c
Sub-classes obo:OBI_0001472c
obo:OBI_0000953c
obo:OBI_0001479c
obo:OBI_0001506c
obo:OBI_0000747c
obo:OMIABIS_0000057c
obo:OBI_0002599c
obo:OMIABIS_0001040c
obo:OMIABIS_0001054c

cultured cell populationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0100060
Description

The extent of a 'cultured cell population' is restricted only in that all cell members must share a propagation history (ie be derived through a common lineage of passages from an initial culture). In being defined in this way, this class can be used to refer to the populations that researchers actually use in the practice of science - ie are the inputs to culturing, experimentation, and sharing. The cells in such populations will be a relatively uniform population as they have experienced similar selective pressures due to their continuous co-propagation. And this population will also have a single passage number, again owing to their common passaging history. Cultured cell populations represent only a collection of cells (ie do not include media, culture dishes, etc), and include populations of cultured unicellular organisms or cultured multicellular organism cells. They can exist under active culture, stored in a quiescent state for future use, or applied experimentally.
Super-classes obo:OBI_0000047c
Restrictions obo:OBI_0000643op some obo:CL_0000010c
obo:OBI_0000643op only obo:CL_0000010c
obo:OBI_0000312op some obo:OBI_0600024c
Sub-classes obo:OBI_0001905c

bronchial alveolar lavagec # Classes

URI http://purl.obolibrary.org/obo/OBI_0100067
Super-classes obo:OBI_0000953c
Restrictions obo:OBI_0000312op only obo:OBI_0600044c
obo:RO_0000087op some obo:OBI_0000112c

data transformationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0200000
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000293op only obo:IAO_0000027c
obo:BFO_0000055op some ()
Sub-classes obo:OBI_0200170c
obo:OBI_0002136c

data transformation objectivec # Classes

URI http://purl.obolibrary.org/obo/OBI_0200166
Super-classes obo:IAO_0000005c
Sub-classes obo:OBI_0000425c

averaging data transformationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0200170
Super-classes obo:OBI_0200000c

pool of specimensc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302716
Super-classes obo:OBI_0000953c

edited documentc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302874
Super-classes obo:IAO_0000310c
Restrictions obo:OBI_0000312op some obo:OBI_0302908c

extractionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302884
Super-classes obo:OBI_0600014c
Restrictions obo:OBI_0000417op some obo:OBI_0000681c
Sub-classes obo:OBI_0666667c

filtrationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302885
Super-classes obo:OBI_0600014c
Restrictions obo:OBI_0000417op some obo:OBI_0000681c
obo:RO_0000057op some obo:OBI_0000151c

centrifugationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302886
Super-classes obo:OBI_0600014c
Restrictions obo:OBI_0000417op some obo:OBI_0000681c
obo:RO_0000057op some obo:OBI_0400106c

stainingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302887
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000417op some obo:OBI_0000456c
Sub-classes obo:OBI_0002123c
obo:OBI_0002124c

storagec # Classes

URI http://purl.obolibrary.org/obo/OBI_0302893
Super-classes obo:OBI_0000838c
Restrictions obo:OBI_0000293op some obo:BFO_0000040c
obo:OBI_0000417op some obo:OBI_0000806c
Sub-classes obo:OBI_0001003c
obo:OBI_0000977c
obo:OBI_0000927c
obo:OBI_0000915c

document editingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302908
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000299op some obo:OBI_0302874c
obo:OBI_0000293op some obo:IAO_0000310c
Sub-classes obo:OBIB_0000018c

digital curationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0302914
Super-classes obo:IAO_0000572c

centrifugec # Classes

URI http://purl.obolibrary.org/obo/OBI_0400106
Super-classes obo:OBI_0000832c
obo:OBI_0000932c
Restrictions obo:RO_0000085op some (obo:OBI_0000372c and ub385bL20358C17c)
obo:RO_0000085op some obo:OBI_0000453c
obo:BFO_0000051op some (obo:OBI_0000372c and ub385bL20358C17c)

microtomec # Classes

URI http://purl.obolibrary.org/obo/OBI_0400168
Super-classes obo:OBI_0000932c
Restrictions obo:RO_0000085op some obo:OBI_0000379c
obo:RO_0000085op some obo:OBI_0000372c
Sub-classes obo:OBI_0002194c

study designc # Classes

URI http://purl.obolibrary.org/obo/OBI_0500000
Super-classes obo:IAO_0000104c
Restrictions obo:BFO_0000051op some obo:OBI_0000272c
Sub-classes obo:OBI_0002615c
obo:OMIABIS_0001018c
obo:OMIABIS_0001024c
obo:OMIABIS_0001017c
obo:OMIABIS_0001019c
obo:OMIABIS_0001023c
obo:OMIABIS_0001022c

eligibility criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0500026
Super-classes obo:OBI_0001755c
Sub-classes obo:OBI_0500028c
obo:OBI_0500027c

inclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0500027
Super-classes obo:OBI_0500026c
Sub-classes obo:OBI_0002423c
obo:OBI_0002558c
obo:OBI_0002454c
obo:OBI_0002562c
obo:OBI_0002455c
obo:OBI_0002460c
obo:OBI_0002560c
obo:OBI_0002563c
obo:OBI_0002453c
obo:OBI_0002555c
obo:OBIB_0000497c
obo:OBI_0002561c
obo:OBI_0002559c
obo:OBI_0002428c
obo:OBIB_0000498c
obo:OBI_0002456c

exclusion criterionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0500028
Super-classes obo:OBI_0500026c
Sub-classes obo:OBI_0002430c
obo:OBI_0002431c
obo:OBI_0002433c
obo:OBI_0002425c
obo:OBIB_0000496c
obo:OBI_0002432c
obo:OBI_0002424c
obo:OBI_0002426c
obo:OBIB_0000495c
obo:OBI_0002429c
obo:OBI_0002434c
obo:OBI_0002435c
obo:OBI_0002427c

human subject enrollmentc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600004
Super-classes obo:OBI_0001928c
Restrictions obo:OBI_0000293op some (ub385bL20482C33c and ub385bL20492C17c and obo:OBI_0000181c and ub385bL20470C17c)
obo:OBI_0000299op some (ub385bL20482C33c and ub385bL20492C17c and obo:OBI_0000181c and ub385bL20470C17c)
obo:BFO_0000055op some (ub385bL20482C33c and ub385bL20492C17c and obo:OBI_0000181c and ub385bL20470C17c)
obo:BFO_0000051op some obo:OBI_0000810c

collecting specimen from organismc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600005
Super-classes obo:OBI_0000659c
Restrictions obo:OBI_0000417op some obo:OBI_0000684c
obo:OBI_0000293op some obo:OBI_0100026c
obo:OBI_0000299op some obo:OBI_0100051c
Sub-classes obo:OBIB_0000231c
obo:OMIABIS_0001044c
obo:OBI_0002650c
obo:OBI_0600044c
obo:OBIB_0000062c
obo:OBIB_0000061c

material component separationc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600014
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000299op some obo:BFO_0000040c
obo:OBI_0000293op some obo:BFO_0000040c
Sub-classes obo:OBI_0600044c
obo:OBI_0600052c
obo:OBI_0600037c
obo:OBI_0302884c
obo:OBI_0302886c
obo:OBI_0002775c
obo:OBI_0302885c
obo:OBI_0600018c

pooling specimensc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600016
Super-classes obo:OBI_0000652c
Restrictions obo:OBI_0000417op some obo:OBI_0000686c
obo:OBI_0000293op min 2
obo:OBI_0000293op some obo:OBI_0100051c
obo:OBI_0000299op some obo:OBI_0302716c

material portioningc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600018
Super-classes obo:OBI_0600014c
Restrictions obo:OBI_0000417op some obo:OBI_0000678c

maintaining cell culturec # Classes

URI http://purl.obolibrary.org/obo/OBI_0600024
Super-classes obo:OBI_0000838c
Restrictions obo:OBI_0000293op some (obo:OBI_0000079c or obo:OBI_0001912c)
obo:OBI_0000417op some obo:OBI_0000806c
obo:OBI_0000299op some obo:OBI_0100060c
obo:OBI_0000293op some obo:OBI_0100060c

establishing cell culturec # Classes

URI http://purl.obolibrary.org/obo/OBI_0600036
Description

A 'cell culture' as used here referes to a new lineage of cells in culture deriving from a single biological source.. New cultures are established through the initial isolation and culturing of cells from an organismal source, or through changes in an existing cell culture or line that result in a new culture with unique characteristics. This can occur through the passaging/selection of a primary culture into a secondary culture or line, or experimental modifications of an existing cell culture or line such as an immortalization process or other stable genetic modification. This class covers establishment of cultures of either multicellular organism cells or unicellular organisms.
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000293op some obo:CL_0000000c
obo:OBI_0000299op some obo:OBI_0100060c
obo:OBI_0000417op some obo:OBI_0000456c
obo:OBI_0000293op some obo:OBI_0000079c
Sub-classes obo:OBI_0001867c

cell culture splittingc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600037
Description

An active cell culture is typically split when it has grown to confluence in its culture dish. Cell culture splitting of a cell culture sample results in an increase in its passage number, which measures how long a sample has been propagated in vitro, and therefore how many selective or genetic changes it is likely to have undergone.
Super-classes obo:OBI_0600014c
Restrictions obo:OBI_0000293op some obo:OBI_0100060c
obo:OBI_0000299op some obo:OBI_0100060c
obo:OBI_0000417op some obo:OBI_0000678c

addition of molecular labelc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600038
Super-classes obo:OBI_0000094c
Restrictions obo:OBI_0000299op some obo:OBI_0001936c
obo:OBI_0000417op some obo:OBI_0000456c
obo:OBI_0000293op some obo:OBI_0002744c
obo:OBI_0000293op some obo:OBI_1110109c

lavagec # Classes

URI http://purl.obolibrary.org/obo/OBI_0600044
Super-classes obo:OBI_0600014c
obo:OBI_0600005c
Restrictions obo:OBI_0000417op some obo:OBI_0000639c

dialysisc # Classes

URI http://purl.obolibrary.org/obo/OBI_0600052
Super-classes obo:OBI_0600014c
Restrictions obo:OBI_0000417op some obo:OBI_0000681c

RNA extractionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0666666
Super-classes obo:OBI_0666667c
Restrictions obo:OBI_0000299op some obo:CHEBI_33697c

nucleic acid extractionc # Classes

URI http://purl.obolibrary.org/obo/OBI_0666667
Super-classes obo:OBI_0302884c
Restrictions obo:OBI_0000293op some (obo:OBI_0000671c or obo:OBI_0100026c or obo:OBI_0100060c)
obo:OBI_0000299op some obo:CHEBI_33696c
Sub-classes obo:OBI_0000257c
obo:OBI_0666666c

cell pelletc # Classes

URI http://purl.obolibrary.org/obo/OBI_1000024
Super-classes obo:OBI_0000047c
Restrictions obo:RO_0001000op some (obo:OBI_0100060c or obo:OBI_0100067c)
obo:OBI_0000312op some obo:OBI_0302886c

donorc # Classes

URI http://purl.obolibrary.org/obo/OBI_1110087
Super-classes obo:BFO_0000023c

target of material additionc # Classes

URI http://purl.obolibrary.org/obo/OBI_1110109
Super-classes obo:BFO_0000040c

FFPE specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_1200000
Super-classes obo:OBI_0000950c

uterine cervix specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000000
Super-classes obo:OBI_0001479c

urethra specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000001
Super-classes obo:OBI_0001479c

cervical mucus specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000002
Super-classes obo:OBI_2000009c

throat specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000003
Super-classes obo:OBI_0001479c

eye specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000004
Super-classes obo:OBI_0001479c

respiratory system specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000005
Super-classes obo:OBI_0001479c

upper respiratory tract specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000006
Super-classes obo:OBI_0001479c

nasopharynx specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000007
Super-classes obo:OBI_0001479c

semen specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000008
Super-classes obo:OBI_0001479c

bodily fluid specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000009
Super-classes obo:OBI_0001479c
Sub-classes obo:OBI_0002502c
obo:OBI_0002509c
obo:OBI_0002510c
obo:OBI_0002506c
obo:OBI_2000015c
obo:OBI_2000013c
obo:OBI_2000002c
obo:OBI_0002515c
obo:OBI_2000014c
obo:OBI_0002514c
obo:OBI_0002501c
obo:OBI_0002505c
obo:OBI_2000012c
obo:OBI_0000655c

chorionic villus specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000010
Super-classes obo:OBI_0001479c

meconium specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000011
Super-classes obo:OBI_0002503c

umbilical cord blood specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000012
Super-classes obo:OBI_2000009c

arterial blood specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000013
Super-classes obo:OBI_2000009c

venous blood specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000014
Super-classes obo:OBI_2000009c

capillary blood specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000015
Super-classes obo:OBI_2000009c

erythrocyte specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000016
Super-classes (obo:OBI_0100051c and ub385bL21320C13c)
obo:OBI_0002599c

reticulocyte specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000017
Super-classes (obo:OBI_0100051c and ub385bL21348C13c)
obo:OBI_0002599c

leukocyte specimenc # Classes

URI http://purl.obolibrary.org/obo/OBI_2000018
Super-classes obo:OBI_0002599c
(obo:OBI_0100051c and ub385bL21376C13c)

clinical historyc # Classes

URI http://purl.obolibrary.org/obo/OGMS_0000015
Super-classes obo:IAO_0000030c
Sub-classes obo:OBIB_0000586c
obo:OBIB_0000585c
obo:OBIB_0000579c
obo:OBIB_0000551c
obo:OBIB_0000583c
obo:OBIB_0000600c
obo:OBIB_0000587c
obo:OBIB_0000557c
obo:OBIB_0000588c
obo:OBIB_0000563c
obo:OBIB_0000561c
obo:OBIB_0000545c
obo:OBIB_0000599c
obo:OBIB_0000576c
obo:OBI_0002390c
obo:OBIB_0000559c
obo:OBIB_0000590c
obo:OBIB_0000558c
obo:OBIB_0000547c
obo:OBIB_0000552c
obo:OBIB_0000565c
obo:OBIB_0000554c
obo:OBIB_0000564c
obo:OBIB_0000568c
obo:OBIB_0000596c
obo:OBIB_0000589c
obo:OBI_0002370c
obo:OBIB_0000595c
obo:OBIB_0000573c
obo:OBIB_0000580c
obo:OBIB_0000593c
obo:OBI_0002389c
obo:OBIB_0000566c
obo:OBIB_0000574c
obo:OBIB_0000582c
obo:OBIB_0000560c
obo:OBIB_0000598c
obo:OBIB_0000553c
obo:OBIB_0000550c
obo:OBIB_0000603c
obo:OBIB_0000556c
obo:OBIB_0000546c
obo:OBIB_0000597c
obo:OBI_0002397c
obo:OBIB_0000575c
obo:OBIB_0000544c
obo:OBIB_0000562c
obo:OBIB_0000549c
obo:OBIB_0000548c
obo:OBIB_0000602c
obo:OBI_0002405c
obo:OBIB_0000578c
obo:OBIB_0000591c
obo:OBIB_0000592c
obo:OBIB_0000594c
obo:OBIB_0000555c
obo:OBIB_0000567c
obo:OBI_0002372c
obo:OBIB_0000584c
obo:OBIB_0000601c
obo:OBI_0002368c
obo:OBIB_0000577c
obo:OBI_0002393c
obo:OBIB_0000543c
obo:OBI_0002369c
obo:OBIB_0000581c

phenotypec # Classes

URI http://purl.obolibrary.org/obo/OGMS_0000023
Super-classes obo:BFO_0000019c

diseasec # Classes

URI http://purl.obolibrary.org/obo/OGMS_0000031
Super-classes obo:BFO_0000016c
Sub-classes obo:DOID_162c

disorderc # Classes

URI http://purl.obolibrary.org/obo/OGMS_0000045
Super-classes obo:BFO_0000040c

diagnosisc # Classes

URI http://purl.obolibrary.org/obo/OGMS_0000073
Super-classes obo:IAO_0000027c
Sub-classes obo:OBI_0002371c
obo:OMIABIS_0001008c
obo:OMIABIS_0001009c
obo:OBIB_0000423c
obo:OBI_0002385c

treatmentc # Classes

URI http://purl.obolibrary.org/obo/OGMS_0000090
Super-classes obo:OBI_0000011c
Sub-classes obo:NCIT_C15477c
obo:NCIT_C16171c
obo:NCIT_C16168c
obo:NCIT_C16212c
obo:NCIT_C16175c
efo:EFO_0003961c

health care encounterc # Classes

URI http://purl.obolibrary.org/obo/OGMS_0000097
Super-classes obo:OBI_0000011c

diagnostic processc # Classes

URI http://purl.obolibrary.org/obo/OGMS_0000104
Super-classes obo:OBI_0000011c

biobankc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000000
Super-classes obo:BFO_0000027c
Sub-classes obo:OMIABIS_0000001c
obo:OBIB_0000355c
obo:OBIB_0000356c
obo:OMIABIS_0001078c

human biobankc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000001
Super-classes obo:OMIABIS_0000000c

settlement part of address of sample collection or study contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000002
Super-classes obo:OMIABIS_0000029c

biobank proper namec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000003
Super-classes obo:IAO_0020000c
Sub-classes obo:OMIABIS_0000005c

ISO 3166-1 alpha-2 codec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000004
Description

Two-letter country codes defined in ISO 3166-1, part of the ISO 3166 standard published by the International Organization for Standardization (ISO), to designate countries, dependent territories, and special areas of geographical interest.
Super-classes obo:IAO_0020000c
Restrictions obo:IAO_0020012op some (obo:GEO_000000006c or obo:GEO_000000396c)
Sub-classes obo:OMIABIS_0000045c
obo:OMIABIS_0000007c
obo:OMIABIS_0000028c

biobank idenfier with ISO 3166-1 alpha-2 codec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000005
Description

Textual string of letters starting with the country code (according to standard ISO1366 alpha2) followed by the underscore “_” and post-fixed by a biobank ID or name specified by its juristic person (nationally specific).
Super-classes (ub385bL21680C29c and ub385bL21685C13c)
obo:OMIABIS_0000003c
Sub-classes obo:OMIABIS_0000047c

obsolete_sample collection or study identifierc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000006
Super-classes oboInOwl:ObsoleteClassc

ISO 3166-1 alpha-2 code for sample collection or study contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000007
Super-classes obo:OMIABIS_0000004c

biobank organizationc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000010
Super-classes obo:OBI_0000245c
Restrictions obo:OBI_0001688op some obo:OMIABIS_0000013c

contactingc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000011
Description

Contacting is the process of one human being starting a communication process with another human being. Contacting can be done using all modes of communication used by humans.
Super-classes obo:OBI_0000011c

contact rolec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000012
Super-classes obo:OMRSE_00000024c
Restrictions obo:BFO_0000054op some obo:OMIABIS_0000011c
obo:BFO_0000054op only obo:OMIABIS_0000011c
obo:RO_0000052op only (obo:NCBITaxon_9606c and ub385bL21880C17c)
Sub-classes obo:OMIABIS_0000093c
obo:OMIABIS_0000094c

biobank contact personc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000013
Super-classes obo:NCBITaxon_9606c

name of biobank contact personc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000014
Super-classes obo:IAO_0020015c

email address of biobank contact personc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000015
Super-classes obo:IAO_0000429c

postal address of biobank contact personc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000016
Super-classes obo:IAO_0000422c

departmentc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000017
Super-classes (ub385bL21995C29c and ub385bL22003C13c)
obo:OBI_0000245c
Sub-classes obo:OMIABIS_0000040c
obo:OMIABIS_0000018c

department of biobank contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000018
Super-classes obo:OMIABIS_0000017c

unique resource locatorc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000019
Super-classes obo:IAO_0000578c
Sub-classes obo:OMIABIS_0000020c

biobank's unique resource locatorc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000020
Super-classes obo:OMIABIS_0000019c

telephone numberc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000021
Description

MB: This class should probably be a subclass to CRID. However, the textual definition of CRID right now states that each instance has the CRID identifier as a part. This is not the case for telephone numbers. Therefore, they cannot be subsumed under CRID now. I am looking into changing IAO accordingly. Once that is done, the class ought to be a subclass of CRID.
Super-classes obo:IAO_0000300c
Restrictions obo:BFO_0000051op only obo:IAO_0000029c
Sub-classes obo:OMIABIS_0000022c
obo:OMIABIS_0000025c

telephone number of biobank contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000022
Super-classes obo:OMIABIS_0000021c

post-office box numberc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000023
Super-classes obo:IAO_0020000c

post-office boxc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000024
Super-classes obo:BFO_0000040c

telephone number of sample collection or study contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000025
Super-classes obo:OMIABIS_0000021c

obsolete_postal codec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000026
Description

MB: This class should probably be a subclass to CRID. However, the textual definition of CRID right now states that each instance has the CRID identifier as a part. This is not the case for postal codes. Therefore, they cannot be subsumed under CRID now. I am looking into changing IAO accordingly. Once that is done, the class ought to be a subclass of CRID.
Super-classes oboInOwl:ObsoleteClassc

postal code of biobank contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000027
Super-classes obo:IAO_0000646c

ISO 3166-1 alpha-2 code for biobank contact personc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000028
Super-classes obo:OMIABIS_0000004c

settlement part of addressc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000029
Super-classes obo:IAO_0000300c
Restrictions obo:IAO_0000136op some obo:GAZ_00000448c
Sub-classes obo:OMIABIS_0000002c
obo:OMIABIS_0000030c

settlement part of address biobank contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000030
Super-classes obo:OMIABIS_0000029c

intra-settlement specification part of addressc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000031
Super-classes obo:IAO_0000300c
Sub-classes obo:OMIABIS_0000043c
obo:OMIABIS_0000032c

intra-settlement specification part of address of biobank contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000032
Super-classes obo:OMIABIS_0000031c

hosted study collectionc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000033
Super-classes obo:BFO_0000027c
obo:OBI_0002076c

name of hosted study collectionc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000034
Super-classes obo:OBIB_0000001c

email address of sample collection or study contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000035
Super-classes obo:IAO_0000429c

sample collection or study aim descriptionc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000036
Super-classes obo:IAO_0000300c

study proper namec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000037
Super-classes obo:IAO_0020000c

name of sample collection responsible or principal investigatorc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000038
Super-classes obo:IAO_0020015c

name of sample collection or study contact personc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000039
Super-classes obo:IAO_0020015c

department of sample collection or study contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000040
Super-classes obo:OMIABIS_0000017c

streetc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000041
Super-classes obo:BFO_0000040c

intra-settlement specification part of address of sample collection or study contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000043
Super-classes obo:OMIABIS_0000031c

postal code for sample collection or study contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000044
Super-classes obo:IAO_0000646c

biobank location ISO 3166-1 alpha-2 codec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000045
Super-classes obo:OMIABIS_0000004c

CTEP organization identifierc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000046
Super-classes obo:IAO_0020000c
Restrictions obo:IAO_0020012op some obo:OBI_0000245c

biobank identifier with ISO 3166-1 alpha-2 code and CTEP organization identifierc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000047
Super-classes obo:OMIABIS_0000005c
(ub385bL23016C29c and ub385bL23035C13c)

obsolete_bone marrow specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000049
Description

Bone marrow contains two types of stem cells: haematopoietic (which can produce blood cells) and stromal (which can produce fat, cartilage and bone).
Super-classes oboInOwl:ObsoleteClassc

fixed tissue specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000050
Super-classes obo:OBI_0000953c
Restrictions obo:OBI_0000312op some obo:OMIABIS_0000911c
Sub-classes obo:OMIABIS_0000052c
obo:OMIABIS_0000051c

fixed tissue block specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000051
Super-classes obo:OMIABIS_0000050c

fixed tissue slide specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000052
Super-classes obo:OMIABIS_0000050c
Sub-classes obo:OBI_0002125c
obo:OBI_0002126c

flash frozen specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000053
Super-classes obo:OBI_0000922c

fresh tissue specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000054
Super-classes obo:OBI_0000971c

frozen tissue block specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000055
Super-classes obo:OBI_0000922c

frozen tissue slide specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000056
Super-classes obo:OBI_0000922c

microdissected specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000057
Super-classes obo:OBI_0100051c

survey datac # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000060
Super-classes obo:IAO_0000027c
Sub-classes obo:OMIABIS_0001032c

sampling specimens for biobankc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000061
Super-classes obo:OBI_0000011c

biobank contact rolec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000093
Super-classes obo:OMIABIS_0000012c

sample collection or study contact rolec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000094
Super-classes obo:OMIABIS_0000012c

sample collection or study contact personc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000099
Super-classes obo:NCBITaxon_9606c

obsolete_study principle investigator or responsiblec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000100
Super-classes oboInOwl:ObsoleteClassc

specimen disease state datumc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_00001006
Super-classes obo:IAO_0000027c
Restrictions obo:IAO_0000136op some obo:OBI_0100051c
Sub-classes obo:OMIABIS_00001010c
obo:OMIABIS_00001012c
obo:OMIABIS_00001011c

diseased state specimen datumc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_00001010
Super-classes obo:OMIABIS_00001006c
Restrictions obo:IAO_0000136op some (obo:OBI_0100051c and ub385bL23296C17c)

mixed state specimen datumc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_00001011
Super-classes obo:OMIABIS_00001006c
Restrictions obo:IAO_0000136op some (obo:OBI_0100051c and ub385bL23315C17c and ub385bL23320C17c)

normal state specimen datumc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_00001012
Super-classes obo:OMIABIS_00001006c
Restrictions obo:IAO_0000136op some obo:OMIABIS_0001054c

obsolete_unknown state specimen datac # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_00001013
Description

This is a temporary state.
Super-classes oboInOwl:ObsoleteClassc

fixationc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000911
Description

The choice of fixation depends on the type of study.
Super-classes obo:OBI_0000094c

obsolete_addition of molecular labelc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0000912
Super-classes oboInOwl:ObsoleteClassc

age interval informationc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001000
Description

Example: age interval is 18-65
Super-classes (obo:IAO_0000030c and ub385bL23378C13c)
obo:IAO_0000030c
Sub-classes obo:OMIABIS_0001029c

average agec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001001
Super-classes obo:OBI_0000679c
(obo:OBI_0000679c and ub385bL23417C13c)

patient registry datac # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001002
Description

It can be said to be a formal record of an internationally agreed minimum amount of information about clinical trial.
Super-classes obo:IAO_0000100c
Restrictions obo:IAO_0000136op some obo:NCBITaxon_9606c
Sub-classes obo:OMIABIS_0001031c

obsolete_survey datac # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001003
Description

The equivalent class restriction includes data combination since the the output of survey execution is from one participant, while the survey data is the combination of data gathered from multipe participants or multiple executions of the survey.
Super-classes oboInOwl:ObsoleteClassc

date of data entryc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001004
Description

It is denoted by Date in ISO-standard (8601) time format.
Super-classes obo:IAO_0000027c
(obo:IAO_0000027c and ub385bL23485C13c)

date of data updatec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001005
Description

It is expressed as a Date in ISO-standard (8601) time format.
Super-classes obo:IAO_0000027c
(obo:IAO_0000027c and ub385bL23521C13c)

end date of sampling for biobankc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001006
Description

It is denoted by Date in ISO-standard (8601) time format.
Super-classes obo:IAO_0000027c
(obo:IAO_0000027c and ub385bL23557C13c)

start date of sampling for biobankc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001007
Description

It is denoted by Date in ISO-standard (8601) time format.
Super-classes obo:IAO_0000027c
(obo:IAO_0000027c and ub385bL23589C13c)

comorbidityc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001008
Description

It is argued that Comorbidity occurs due to a disposition established by a prior infection with a pathogenic organism of a different kind.
Super-classes obo:OGMS_0000073c

primary diagnosisc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001009
Super-classes obo:OGMS_0000073c

count of current sampled human study participantc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001010
Super-classes obo:APOLLO_SV_00000032c
Restrictions obo:IAO_0000136op some (obo:BFO_0000027c and ub385bL23643C17c)

count of current total human study participantc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001011
Super-classes obo:APOLLO_SV_00000032c
Restrictions obo:IAO_0000136op some (obo:BFO_0000027c and ub385bL23687C17c)

physiological measurement datac # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001012
Description

Examples: Audiology, Cardiac Physiology, GI Physiology, Neurophysiology, Ophthalmic and Vision Science, Respiratory and Sleep Physiology, Urodynamics, Vascular Technology
Super-classes obo:IAO_0000027c
(obo:IAO_0000027c and ub385bL23725C13c)

storage temperature settingc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001013
Description

Examples: -18 °C to -35 °C, -60 °C to -85 °C, Liquid nitrogen, Room temperature etc
Super-classes obo:IAO_0000140c

omics experiment on specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001014
Description

A tentative procedure that is aimed at discovering some characteristic of a large familiy of cellular molecules, having named by appending suffix "-omics."
Super-classes (obo:OBI_0000011c and ub385bL23771C13c and ub385bL23780C13c)
obo:OBI_0000471c

number of sampled human study participants objectivec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001015
Super-classes obo:IAO_0000005c
Restrictions obo:BFO_0000050op some obo:OBI_0500000c

number of total human study participant objectivec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001016
Super-classes obo:IAO_0000005c
Restrictions obo:BFO_0000050op some obo:OBI_0500000c

case control study designc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001017
Super-classes obo:OBI_0500000c

cross sectional study designc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001018
Super-classes obo:OBI_0500000c

longitudinal study designc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001019
Super-classes obo:OBI_0500000c
Sub-classes obo:OMIABIS_0001020c
obo:OMIABIS_0001021c

cohort study designc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001020
Super-classes obo:OMIABIS_0001019c
Sub-classes obo:OBI_0002614c

panel study designc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001021
Super-classes obo:OMIABIS_0001019c

population based study designc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001022
Super-classes obo:OBI_0500000c

quality control study designc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001023
Super-classes obo:OBI_0500000c

twin study designc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001024
Super-classes obo:OBI_0500000c

survey plan specificationc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001025
Super-classes obo:IAO_0000104c

medical recordc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001026
Description

It is used interchangeably with health record and medical chart. https://en.wikipedia.org/wiki/Medical_record
Super-classes obo:IAO_0000310c
Sub-classes obo:OMIABIS_0001027c

sample medical recordc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001027
Super-classes obo:OMIABIS_0001026c
Restrictions obo:IAO_0000136op some (obo:NCBITaxon_9606c and ub385bL23898C17c)

sample handling summaryc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001028
Description

It could be argued as to why this class was not created as an 'objective specification'. However, the emphasis here is to 'a briefing of how the specimen in the sample collection have been handled as an indication of specimen quality.'
Super-classes obo:IAO_0000310c

age interval information for sampled donorsc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001029
Super-classes obo:OMIABIS_0001000c
(obo:IAO_0000030c and ub385bL23940C13c)

donor patient registry datac # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001031
Super-classes obo:OMIABIS_0001002c
Restrictions obo:IAO_0000136op some obo:OBI_1110087c

study subject survey datac # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001032
Description

Examples: Individual Disease History, Individual History of Injuries, Medication, Perception of Health, Women's Health, Reproductive History, Familial Disease History, Life Habits/Behaviors, Sociodemographic Characteristics, Socioeconomic Characteristics, Physical Environment, Mental Health, Other.
Super-classes obo:OMIABIS_0000060c
(obo:OMIABIS_0000060c and ub385bL24000C13c)

sample collection data entryc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001033
Super-classes obo:OBI_0000011c

sample collection data updatec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001034
Super-classes obo:OBI_0000011c
Restrictions obo:OBI_0000299op some obo:OMIABIS_0001005c

survey executionc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001035
Super-classes obo:OBI_0000011c

temperature regulatingc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001036
Description

As per placing the term as a planned process, it can be argued that nature does play a role in the final output of the actual temperature.
Super-classes obo:OBI_0000011c

comment from tissue procurementc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001037
Super-classes obo:IAO_0000300c
Restrictions obo:IAO_0000136op some (obo:OMIABIS_0000061c or ub385bL24080C17c)
Sub-classes obo:OBIB_0000439c
obo:OBIB_0000384c
obo:OBIB_0000091c
obo:OBIB_0000090c
obo:OBIB_0000136c
obo:OBIB_0000195c
obo:OBIB_0000151c
obo:OBIB_0000152c
obo:OBIB_0000391c

specimen measurementc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001038
Super-classes obo:IAO_0000109c
(obo:IAO_0000109c and ub385bL24098C13c and ub385bL24103C13c)

date of specimen collectionc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001039
Description

It is denoted by Date in ISO-standard (8601) time format.
Super-classes obo:IAO_0000027c
(obo:IAO_0000027c and ub385bL24121C13c)
Sub-classes obo:OBIB_0000077c
obo:OBIB_0000076c
obo:OBIB_0000100c

specimen meeting specificationc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001040
Super-classes obo:OBI_0100051c

surgical procedurec # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001041
Super-classes obo:OBI_0000011c
Sub-classes obo:OBIB_0000189c
obo:OBIB_0000175c
obo:OBIB_0000161c
obo:OBIB_0000187c
obo:OBIB_0000191c
obo:OBIB_0000159c
obo:OBIB_0000157c
obo:OBIB_0000125c
obo:OBIB_0000154c
obo:OBIB_0000155c
obo:OBIB_0000158c
obo:OBIB_0000176c
obo:OBIB_0000181c
obo:OBIB_0000179c
obo:OBIB_0000164c
obo:OBIB_0000193c
obo:OBIB_0000163c
obo:OBIB_0000180c
obo:OBIB_0000160c
obo:OBIB_0000186c
obo:OBIB_0000190c
obo:OBIB_0000156c
obo:OBIB_0000192c
obo:OBIB_0000170c
obo:OBIB_0000118c
obo:OBIB_0000178c
obo:OBIB_0000126c
obo:OBIB_0000188c
obo:OAE_0001159c
obo:OBIB_0000182c
obo:OBIB_0000177c
obo:OBIB_0000162c

specimen preparation contactc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001042
Super-classes obo:IAO_0020015c
Restrictions obo:IAO_0000136op some (obo:NCBITaxon_9606c and ub385bL24174C17c and ub385bL24188C17c)

time in formalin measurementc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001043
Super-classes obo:IAO_0000416c
Restrictions obo:IAO_0000136op some (ub385bL24208C33c and ub385bL24214C17c)

specimen surgical removalc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001044
Super-classes obo:OBI_0600005c

specimen freezingc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001045
Super-classes obo:OBI_0000915c

specimen IDc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001046
Super-classes (ub385bL24271C29c and ub385bL24276C13c)
obo:IAO_0020000c
Sub-classes obo:OBIB_0000365c
obo:FLU_0001019c
obo:OBIB_0000204c

case IDc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001047
Super-classes obo:IAO_0020000c
Restrictions obo:IAO_0000136op some (obo:NCBITaxon_9606c and ub385bL24296C17c and ub385bL24301C17c)

specimen measurement specificationc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001048
Description

A specification (often abbreviated as spec) may refer to an explicit set of requirements to be satisfied by a material, design, product, or service.
Super-classes obo:IAO_0000005c

time of specimen freezingc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001049
Super-classes (obo:IAO_0000027c and ub385bL24328C13c)
obo:IAO_0000027c
Sub-classes obo:OBIB_0000245c
obo:OBIB_0000244c

time of surgical removal of specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001050
Super-classes (obo:IAO_0000027c and ub385bL24353C13c)
obo:IAO_0000027c
Sub-classes obo:OBIB_0000081c

normal specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001054
Super-classes obo:OBI_0100051c

obsolete_cerebrospinal fluid specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001075
Description

Abbreviated as 'CSF'.
Super-classes oboInOwl:ObsoleteClassc

obsolete_faeces specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001076
Super-classes oboInOwl:ObsoleteClassc

obsolete_saliva specimenc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001077
Description

It is a clear, tasteless, odorless, slightly acidic (pH 6.8) viscid fluid, secreted from the parotid, sublingual, and submandibular salivary glands and the mucous glands of the oral cavity.
Super-classes oboInOwl:ObsoleteClassc

hosting biobankc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001078
Super-classes obo:OMIABIS_0000000c

specimen donorc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001079
Super-classes obo:NCBITaxon_9606c

sample handlingc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001080
Super-classes obo:OBI_0000011c

start of sampling specimens for biobankc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001081
Super-classes obo:BFO_0000035c
Restrictions obo:BFO_0000050op some obo:OMIABIS_0000061c

end of sampling specimens for biobankc # Classes

URI http://purl.obolibrary.org/obo/OMIABIS_0001082
Super-classes obo:BFO_0000035c
Restrictions obo:BFO_0000050op some obo:OMIABIS_0000061c

human health care rolec # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000010
Description

Mathias Brochhausen
Super-classes obo:OMRSE_00000024c
Restrictions obo:BFO_0000054op some obo:OGMS_0000097c
Sub-classes obo:OMRSE_00000012c

health care provider rolec # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000012
Description

William R. Hogan
Super-classes (ub385bL24563C29c and ub385bL24573C13c)
obo:OMRSE_00000010c
Sub-classes obo:OMRSE_00000014c
obo:OBIB_0000226c
obo:OBIB_0000228c
obo:OBIB_0000225c

nurse rolec # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000014
Super-classes obo:OMRSE_00000012c
Restrictions obo:RO_0000052op some obo:NCBITaxon_9606c
Sub-classes obo:OBIB_0000227c

collection of humansc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000023
Super-classes obo:PCO_0000000c

role in human social processesc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000024
Description

Previous definition: A role played by an entity in human social processes.
Super-classes obo:BFO_0000023c
Restrictions obo:RO_0000052op some (obo:OBI_0000245c or obo:OBI_0100026c or obo:OBI_0000245c or obo:OBI_0100026c)
obo:RO_0000052op only (obo:OBI_0000245c or obo:OBI_0100026c or obo:OBI_0000245c or obo:OBI_0100026c)
Sub-classes obo:OMIABIS_0000012c
obo:OMRSE_00000038c
obo:OMRSE_00000010c

aggregate of organizationsc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000033
Description

It is often convenient to group organizations together that otherwise might not even interact with one another.

Super-classes obo:BFO_0000040c

legal person rolec # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000038
Description

We are aware of the fact that Wikipedia's definition differs from ours by saying that "Legal personality (...) is the characteristic of a non-living entity regarded by law to have the status of personhood" (http://en.wikipedia.org/wiki/Legal_personality) However, Shaw explicates: "In any legal system, certain entities, whether they be individuals or companies, will be regarded as possessing rights and duties enforceable at law. Thus an individual may prosecute or be prosecuted for assault and a company can sue for breach of contract. They are able to do this because the law recognises them as 'legal persons' possessing the capacity to have and to maintain certain rights, and being subject to perform specific duties. (...) In municipal law individuals, limited companies and public corporations are recognized as each possessing a distinct legal personality, the terms of which are circumscribed by the relevant legislation" (Shaw MN: International Law. Sixth Edition. Cambridge University Press, Cambridge, 2008). We hold that Shaw's position is ontological more prolific since it not only allows to explain how groups of individuals become recognized as unities at law, but also how different individuals can hold different legal personality roles (always against the context of one legal system). The latter will proof useful when dealing with the representing comatous patients or minorsat law in ontologies.
Super-classes obo:OMRSE_00000024c
(ub385bL24675C29c and ub385bL24685C13c)

social identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000204
Description

We include (i)-(iii) to acknowledge that there are different senses of "identify" that are relevant here, and that we may not always be sure which sense the person concretizing the social identity information content entity intended. While (i) concerns how one thinks of oneself, (ii) and (iii) are more focused on one's interactions with others. Importantly, some choose not to share with others how they identify in the sense of (i). For example, one can consider oneself to be some certain gender without either wanting others to know or choosing to present oneself in a corresponding way. We distinguish (ii) and (iii) because one can prefer to be regarded some certain way without attempting to present oneself in any corresponding way.
Super-classes obo:IAO_0000030c
Sub-classes obo:OMRSE_00000213c
obo:OMRSE_00000209c
obo:OMRSE_00000205c

ethnic identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000205
Description

Ethnicity is separate from but related to racial identity. It refers more to identifying with a particular culture than with individuals similar in physical appearance. It includes things like Hispanic ethnicity (which spans many nations) and national cultural identities like Irish and ethnic groups within nations such as Catalan and Armenian.
Super-classes obo:OMRSE_00000204c
Sub-classes obo:OMRSE_00000206c

OMB ethnic identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000206
Description

OMB dichotomizes ethnicity into Hispanic or Latino and Not Hispanic or Latino, and ignores all other forms of ethnicity.
Super-classes obo:OMRSE_00000205c
Sub-classes obo:OMRSE_00000207c
obo:OMRSE_00000208c

OMB Hispanic or Latino identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000207
Description

It comprehends people of Portuguese culture or origin in Brazil.
Super-classes obo:OMRSE_00000206c

OMB not Hispanic or Latino identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000208
Super-classes obo:OMRSE_00000206c

gender identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000209
Super-classes obo:OMRSE_00000204c
Sub-classes obo:OMRSE_00000210c
obo:OMRSE_00000211c
obo:OMRSE_00000212c

female gender identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000210
Super-classes obo:OMRSE_00000209c

male gender identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000211
Super-classes obo:OMRSE_00000209c

non-binary identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000212
Super-classes obo:OMRSE_00000209c

racial identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000213
Super-classes obo:OMRSE_00000204c
Sub-classes obo:OMRSE_00000214c

OMB racial identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000214
Super-classes obo:OMRSE_00000213c
Sub-classes obo:OMRSE_00000217c
obo:OMRSE_00000218c
obo:OMRSE_00000216c
obo:OMRSE_00000215c
obo:OMRSE_00000219c

OMB American Indian or Alaska Native identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000215
Description

This definition corresponds to that used by OMB. It is worth noting that the OMB definition from which this one is derived is problematic, in that it implies that one's race cannot be Native American or Alaskan Native unless one maintains tribal affiliations or community attachment.
Super-classes obo:OMRSE_00000214c

OMB Asian identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000216
Super-classes obo:OMRSE_00000214c

OMB black or African American identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000217
Super-classes obo:OMRSE_00000214c

OMB Native Hawaiian or other Pacific Islander identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000218
Super-classes obo:OMRSE_00000214c

OMB white identity information content entityc # Classes

URI http://purl.obolibrary.org/obo/OMRSE_00000219
Super-classes obo:OMRSE_00000214c

agec # Classes

URI http://purl.obolibrary.org/obo/PATO_0000011
Super-classes obo:PATO_0000165c
Sub-classes obo:OBIB_0000320c

biological sexc # Classes

URI http://purl.obolibrary.org/obo/PATO_0000047
Super-classes obo:PATO_0001995c
Sub-classes obo:OBIB_0000483c

morphologyc # Classes

URI http://purl.obolibrary.org/obo/PATO_0000051
Super-classes obo:PATO_0001241c
Sub-classes obo:PATO_0000122c
obo:PATO_0000117c
obo:PATO_0001442c

sizec # Classes

URI http://purl.obolibrary.org/obo/PATO_0000117
Super-classes obo:PATO_0000051c
Sub-classes obo:PATO_0001710c
obo:PATO_0000119c

heightc # Classes

URI http://purl.obolibrary.org/obo/PATO_0000119
Super-classes obo:PATO_0000117c

lengthc # Classes

URI http://purl.obolibrary.org/obo/PATO_0000122
Super-classes obo:PATO_0000051c

massc # Classes

URI http://purl.obolibrary.org/obo/PATO_0000125
Super-classes obo:PATO_0001018c

weightc # Classes

URI http://purl.obolibrary.org/obo/PATO_0000128
Super-classes obo:PATO_0001018c

positionc # Classes

URI http://purl.obolibrary.org/obo/PATO_0000140
Super-classes obo:PATO_0001018c
Sub-classes obo:OBI_0002000c

temperaturec # Classes

URI http://purl.obolibrary.org/obo/PATO_0000146
Super-classes obo:PATO_0001018c
Sub-classes obo:PATO_0001985c

timec # Classes

URI http://purl.obolibrary.org/obo/PATO_0000165
Super-classes obo:PATO_0001018c
Sub-classes obo:PATO_0000011c

viabilityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0000169
Super-classes obo:PATO_0001995c
Sub-classes obo:PATO_0001422c
obo:PATO_0001421c

volumec # Classes

URI http://purl.obolibrary.org/obo/PATO_0000918
Super-classes obo:PATO_0001710c

physical qualityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001018
Super-classes obo:PATO_0001241c
Sub-classes obo:PATO_0000140c
obo:PATO_0015009c
obo:PATO_0000125c
obo:PATO_0000128c
obo:PATO_0000146c
obo:PATO_0000165c

physical object qualityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001241
Super-classes obo:BFO_0000019c
Sub-classes obo:PATO_0001995c
obo:PATO_0000051c
obo:PATO_0001018c

alivec # Classes

URI http://purl.obolibrary.org/obo/PATO_0001421
Super-classes obo:PATO_0000169c

deadc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001422
Super-classes obo:PATO_0000169c

wholenessc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001442
Super-classes obo:PATO_0000051c
Sub-classes obo:OBI_0002001c

3-D extentc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001710
Super-classes obo:PATO_0000117c
Sub-classes obo:PATO_0000918c

frozenc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001985
Super-classes obo:PATO_0000146c

organismal qualityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0001995
Super-classes obo:PATO_0001241c
Sub-classes obo:PATO_0000047c
obo:PATO_0000169c

humidityc # Classes

URI http://purl.obolibrary.org/obo/PATO_0015009
Super-classes obo:PATO_0001018c

collection of organismsc # Classes

URI http://purl.obolibrary.org/obo/PCO_0000000
Super-classes obo:BFO_0000027c
Sub-classes obo:OMRSE_00000023c

proteinc # Classes

URI http://purl.obolibrary.org/obo/PR_000000001
Super-classes obo:CHEBI_16670c
Sub-classes obo:PR_000009054c

insulin gene translation productc # Classes

URI http://purl.obolibrary.org/obo/PR_000009054
Super-classes obo:PR_000000001c

obsolete molecular labelc # Classes

URI http://purl.obolibrary.org/obo/REO_0000280
Super-classes oboInOwl:ObsoleteClassc

regionc # Classes

URI http://purl.obolibrary.org/obo/SO_0000001
Super-classes obo:BFO_0000031c

uterine cervixc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000002
Super-classes obo:UBERON_0000465c

pituitary glandc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000007
Super-classes obo:UBERON_0000465c

lymph nodec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000029
Super-classes obo:UBERON_0000465c

urethrac # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000057
Super-classes obo:UBERON_0000465c

large intestinec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000059
Super-classes obo:UBERON_0000064c

organ partc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000064
Super-classes obo:UBERON_0000465c
Sub-classes obo:UBERON_0001156c
obo:UBERON_0000996c
obo:UBERON_0036214c
obo:UBERON_0001161c
obo:UBERON_0002116c
obo:UBERON_0022276c
obo:UBERON_0002084c
obo:UBERON_0001114c
obo:UBERON_0000995c
obo:UBERON_0001153c
obo:UBERON_0001496c
obo:FMA_17181c
obo:UBERON_0003688c
obo:UBERON_0001120c
obo:FMA_242207c
obo:UBERON_0008954c
obo:UBERON_0001052c
obo:UBERON_0022277c
obo:UBERON_0001150c
obo:UBERON_0001158c
obo:UBERON_0001119c
obo:FMA_19972c
obo:UBERON_0003889c
obo:UBERON_0000059c
obo:UBERON_0002108c
obo:FMA_83876c
obo:UBERON_0002081c
obo:UBERON_0009853c
obo:FMA_19973c
obo:UBERON_0001159c
obo:UBERON_0001157c
obo:UBERON_0007650c
obo:UBERON_0035840c
obo:FMA_15584c
obo:UBERON_0002358c

mouthc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000165
Super-classes obo:UBERON_0000465c

amniotic fluidc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000173
Super-classes obo:UBERON_0000463c

bloodc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000178
Super-classes obo:UBERON_0006314c
Sub-classes obo:UBERON_0013755c
obo:UBERON_0013757c
obo:UBERON_0012168c
obo:UBERON_0013756c

breastc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000310
Super-classes obo:UBERON_0000465c

cervical mucusc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000316
Super-classes obo:UBERON_0006314c

throatc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000341
Super-classes obo:UBERON_0000465c

renal medullac # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000362
Super-classes obo:UBERON_0000481c

organism substancec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000463
Super-classes obo:UBERON_0000465c
Sub-classes obo:UBERON_0000173c
obo:UBERON_0007311c
obo:UBERON_0006911c
obo:UBERON_0001988c
obo:UBERON_0001968c
obo:UBERON_0001797c
obo:UBERON_0006314c
obo:UBERON_0001836c
obo:UBERON_0001088c

material anatomical entityc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000465
Super-classes obo:BFO_0000040c
Sub-classes obo:UBERON_0001830c
obo:UBERON_0001835c
obo:FMA_24981c
obo:UBERON_0000992c
obo:UBERON_0002415c
obo:UBERON_0002113c
obo:UBERON_0002469c
obo:UBERON_0001987c
obo:UBERON_0000057c
obo:UBERON_0002369c
obo:UBERON_0001557c
obo:UBERON_0000341c
obo:UBERON_0001037c
obo:UBERON_0000990c
obo:UBERON_0000029c
obo:UBERON_0001004c
obo:UBERON_0001043c
obo:FMA_24980c
obo:UBERON_0002048c
obo:UBERON_0000064c
obo:UBERON_0000310c
obo:UBERON_0000165c
obo:UBERON_0000955c
obo:UBERON_0001729c
obo:UBERON_0000007c
obo:UBERON_0000945c
obo:UBERON_0001264c
obo:UBERON_0000947c
obo:UBERON_0000970c
obo:UBERON_0000463c
obo:UBERON_0001155c
obo:UBERON_0002046c
obo:UBERON_0000479c
obo:UBERON_0001981c
obo:UBERON_0000481c
obo:UBERON_0000002c
obo:UBERON_0002106c
obo:UBERON_0001225c
obo:UBERON_0000948c
obo:FMA_57987c
obo:UBERON_0001728c
obo:UBERON_0003714c
obo:UBERON_0002367c
obo:UBERON_0007610c
obo:UBERON_0002032c
obo:UBERON_0002368c
obo:UBERON_0001255c
obo:UBERON_0002097c
obo:UBERON_0001723c
obo:UBERON_0002107c
obo:UBERON_0000473c
obo:UBERON_0001567c
obo:UBERON_0002199c
obo:UBERON_0001621c
obo:UBERON_0007106c

testisc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000473
Super-classes obo:UBERON_0000465c

anatomical clusterc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000477
Super-classes obo:BFO_0000040c
Sub-classes obo:UBERON_0001323c
obo:UBERON_0000956c

tissuec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000479
Super-classes obo:UBERON_0000465c
Sub-classes obo:UBERON_0004648c
obo:UBERON_0001013c
obo:UBERON_0002371c
obo:UBERON_0001134c

multi-tissue structurec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000481
Super-classes obo:UBERON_0000465c
Sub-classes obo:UBERON_0000362c
obo:UBERON_0006618c
obo:UBERON_0002037c

stomachc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000945
Super-classes obo:UBERON_0000465c

aortac # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000947
Super-classes obo:UBERON_0000465c

heartc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000948
Super-classes obo:UBERON_0000465c

brainc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000955
Super-classes obo:UBERON_0000465c

cerebral cortexc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000956
Super-classes obo:UBERON_0000477c

eyec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000970
Super-classes obo:UBERON_0000465c

reproductive systemc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000990
Super-classes obo:UBERON_0000465c

ovaryc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000992
Super-classes obo:UBERON_0000465c
Sub-classes obo:UBERON_0002118c
obo:UBERON_0002119c

uterusc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000995
Super-classes obo:UBERON_0000064c

vaginac # Classes

URI http://purl.obolibrary.org/obo/UBERON_0000996
Super-classes obo:UBERON_0000064c

respiratory systemc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001004
Super-classes obo:UBERON_0000465c

adipose tissuec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001013
Super-classes obo:UBERON_0000479c
Sub-classes obo:UBERON_0010414c

strand of hairc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001037
Super-classes obo:UBERON_0000465c

esophagusc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001043
Super-classes obo:UBERON_0000465c

rectumc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001052
Super-classes obo:UBERON_0000064c

pleural fluidc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001087
Super-classes obo:UBERON_0006314c

urinec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001088
Super-classes obo:UBERON_0000463c

sweatc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001089
Super-classes obo:UBERON_0006314c

synovial fluidc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001090
Super-classes obo:UBERON_0006314c

right lobe of liverc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001114
Super-classes obo:UBERON_0000064c

right lobe of thyroid glandc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001119
Super-classes obo:UBERON_0000064c

left lobe of thyroid glandc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001120
Super-classes obo:UBERON_0000064c

skeletal muscle tissuec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001134
Super-classes obo:UBERON_0000479c
Sub-classes obo:UBERON_0001388c

body of pancreasc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001150
Super-classes obo:UBERON_0000064c

caecumc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001153
Super-classes obo:UBERON_0000064c

colonc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001155
Super-classes obo:UBERON_0000465c

ascending colonc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001156
Super-classes obo:UBERON_0000064c

transverse colonc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001157
Super-classes obo:UBERON_0000064c

descending colonc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001158
Super-classes obo:UBERON_0000064c

sigmoid colonc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001159
Super-classes obo:UBERON_0000064c

body of stomachc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001161
Super-classes obo:UBERON_0000064c

cortex of kidneyc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001225
Super-classes obo:UBERON_0000465c

right adrenal glandc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001233
Super-classes obo:UBERON_0002369c

left adrenal glandc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001234
Super-classes obo:UBERON_0002369c

urinary bladderc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001255
Super-classes obo:UBERON_0000465c

pancreasc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001264
Super-classes obo:UBERON_0000465c

peritoneal fluidc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001268
Super-classes obo:UBERON_0006314c

tibial nervec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001323
Super-classes obo:UBERON_0000477c
Sub-classes obo:FMA_22109c
obo:FMA_22110c

cerebrospinal fluidc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001359
Super-classes obo:UBERON_0006314c

gastrocnemiusc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001388
Super-classes obo:UBERON_0001134c

ascending aortac # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001496
Super-classes obo:UBERON_0000064c

upper respiratory tractc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001557
Super-classes obo:UBERON_0000465c

cheekc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001567
Super-classes obo:UBERON_0000465c

coronary arteryc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001621
Super-classes obo:UBERON_0000465c

tonguec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001723
Super-classes obo:UBERON_0000465c

nasopharynxc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001728
Super-classes obo:UBERON_0000465c

oropharynxc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001729
Super-classes obo:UBERON_0000465c

vitreous humorc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001797
Super-classes obo:UBERON_0000463c

minor salivary glandc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001830
Super-classes obo:UBERON_0000465c

lower lipc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001835
Super-classes obo:UBERON_0000465c

salivac # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001836
Super-classes obo:UBERON_0000463c

milkc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001913
Super-classes obo:UBERON_0006314c

semenc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001968
Super-classes obo:UBERON_0000463c

bilec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001970
Super-classes obo:UBERON_0006314c

blood vesselc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001981
Super-classes obo:UBERON_0000465c

placentac # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001987
Super-classes obo:UBERON_0000465c

fecesc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0001988
Super-classes obo:UBERON_0000463c
Sub-classes obo:UBERON_0007109c

areolac # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002032
Super-classes obo:UBERON_0000465c

cerebellumc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002037
Super-classes obo:UBERON_0000481c

thyroid glandc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002046
Super-classes obo:UBERON_0000465c

lungc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002048
Super-classes obo:UBERON_0000465c
Sub-classes obo:UBERON_0002167c
obo:UBERON_0002168c

right cardiac atriumc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002078
Super-classes obo:UBERON_0002081c

cardiac atriumc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002081
Super-classes obo:UBERON_0000064c
Sub-classes obo:UBERON_0002078c

heart left ventriclec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002084
Super-classes obo:UBERON_0000064c

skin of bodyc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002097
Super-classes obo:UBERON_0000465c
Sub-classes obo:FMA_37829c
obo:UBERON_0036149c
obo:FMA_37830c

spleenc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002106
Super-classes obo:UBERON_0000465c

liverc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002107
Super-classes obo:UBERON_0000465c

small intestinec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002108
Super-classes obo:UBERON_0000064c

kidneyc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002113
Super-classes obo:UBERON_0000465c
Sub-classes obo:UBERON_0004539c
obo:UBERON_0004538c

ileumc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002116
Super-classes obo:UBERON_0000064c

right ovaryc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002118
Super-classes obo:UBERON_0000992c

left ovaryc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002119
Super-classes obo:UBERON_0000992c

right lungc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002167
Super-classes obo:UBERON_0002048c

left lungc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002168
Super-classes obo:UBERON_0002048c

integumentc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002199
Super-classes obo:UBERON_0000465c

peritoneumc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002358
Super-classes obo:UBERON_0000064c

prostate glandc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002367
Super-classes obo:UBERON_0000465c

endocrine glandc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002368
Super-classes obo:UBERON_0000465c

adrenal glandc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002369
Super-classes obo:UBERON_0000465c
Sub-classes obo:UBERON_0001233c
obo:UBERON_0001234c

bone marrowc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002371
Super-classes obo:UBERON_0000479c

pericardial fluidc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002409
Super-classes obo:UBERON_0006314c

tailc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002415
Super-classes obo:UBERON_0000465c

esophagus mucosac # Classes

URI http://purl.obolibrary.org/obo/UBERON_0002469
Super-classes obo:UBERON_0000465c
Sub-classes obo:FMA_63008c

omentumc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0003688
Super-classes obo:UBERON_0000064c
Sub-classes obo:UBERON_0005448c

neural tissuec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0003714
Super-classes obo:UBERON_0000465c

fallopian tubec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0003889
Super-classes obo:UBERON_0000064c

left kidneyc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0004538
Super-classes obo:UBERON_0002113c

right kidneyc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0004539
Super-classes obo:UBERON_0002113c

esophagus muscularis mucosac # Classes

URI http://purl.obolibrary.org/obo/UBERON_0004648
Super-classes obo:UBERON_0000479c
Sub-classes obo:FMA_63062c

greater omentumc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0005448
Super-classes obo:UBERON_0003688c

bodily fluidc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0006314
Super-classes obo:UBERON_0000463c
Sub-classes obo:UBERON_0002409c
obo:UBERON_0001087c
obo:UBERON_0001970c
obo:UBERON_0001268c
obo:UBERON_0000178c
obo:UBERON_0001089c
obo:UBERON_0001913c
obo:UBERON_0001359c
obo:UBERON_0001090c
obo:UBERON_0000316c

atrium auricular regionc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0006618
Super-classes obo:UBERON_0000481c

digestive system secreted substancec # Classes

URI http://purl.obolibrary.org/obo/UBERON_0006911
Super-classes obo:UBERON_0000463c

chorionic villusc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0007106
Super-classes obo:UBERON_0000465c

meconiumc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0007109
Super-classes obo:UBERON_0001988c

sputumc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0007311
Super-classes obo:UBERON_0000463c

tibial arteryc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0007610
Super-classes obo:UBERON_0000465c
Sub-classes obo:FMA_43899c

esophagogastric junctionc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0007650
Super-classes obo:UBERON_0000064c

lingula of left lungc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0008954
Super-classes obo:UBERON_0000064c

body of uterusc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0009853
Super-classes obo:UBERON_0000064c

omental fat padc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0010414
Super-classes obo:UBERON_0001013c

umbilical cord bloodc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0012168
Super-classes obo:UBERON_0000178c

arterial bloodc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0013755
Super-classes obo:UBERON_0000178c

venous bloodc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0013756
Super-classes obo:UBERON_0000178c

capillary bloodc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0013757
Super-classes obo:UBERON_0000178c

splenic flexure of colonc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0022276
Super-classes obo:UBERON_0000064c

hepatic flexure of colonc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0022277
Super-classes obo:UBERON_0000064c

esophagogastric junction muscularis mucosac # Classes

URI http://purl.obolibrary.org/obo/UBERON_0035840
Super-classes obo:UBERON_0000064c

life-death temporal boundaryc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0035944
Super-classes obo:BFO_0000035c
Sub-classes obo:OBIB_0000095c
obo:OBIB_0000094c

suprapubic skinc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0036149
Super-classes obo:UBERON_0002097c

rectosigmoid junctionc # Classes

URI http://purl.obolibrary.org/obo/UBERON_0036214
Super-classes obo:UBERON_0000064c

length unitc # Classes

URI http://purl.obolibrary.org/obo/UO_0000001
Super-classes obo:IAO_0000003c

mass unitc # Classes

URI http://purl.obolibrary.org/obo/UO_0000002
Super-classes obo:IAO_0000003c

time unitc # Classes

URI http://purl.obolibrary.org/obo/UO_0000003
Super-classes obo:IAO_0000003c
Members obo:UO_0000034
obo:UO_0000036
obo:UO_0000033
obo:UO_0000031
obo:UO_0000010
obo:UO_0000035
obo:UO_0000032

temperature unitc # Classes

URI http://purl.obolibrary.org/obo/UO_0000005
Super-classes obo:IAO_0000003c
Members obo:UO_0000027
obo:UO_0000195

concentration unitc # Classes

URI http://purl.obolibrary.org/obo/UO_0000051
Super-classes obo:IAO_0000003c
Members obo:UO_0000196
obo:UO_0000165
obo:UO_0000207
obo:UO_0000163
obo:UO_0000301
obo:UO_0000176
obo:UO_0000062
obo:UO_0000064
obo:UO_0000065
obo:UO_0000066
obo:UO_0000164
obo:UO_0000212
obo:UO_0000063
obo:UO_0000208
obo:UO_0000175

volume unitc # Classes

URI http://purl.obolibrary.org/obo/UO_0000095
Super-classes obo:IAO_0000003c

Laboratoryc # Classes

URI http://vivoweb.org/ontology/core#Laboratory
Super-classes obo:OBI_0000245c
Sub-classes obo:OBIB_0000357c
obo:OBIB_0000358c

ethnic groupc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0001799
Super-classes obo:OBI_0000181c
Sub-classes efo:EFO_0003151c
efo:EFO_0003152c
obo:ERO_0002076c
obo:ERO_0001979c
obo:NCIT_C128458c
obo:ERO_0002032c
obo:ERO_0001978c
efo:EFO_0003169c
obo:ERO_0001983c

obsolete_African Americanc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0003150
Super-classes efo:EFO_0003151c

obsolete_Americanc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0003151
Super-classes efo:EFO_0001799c
Sub-classes efo:EFO_0003166c
efo:EFO_0003159c
efo:EFO_0003150c

obsolete_Asianc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0003152
Super-classes efo:EFO_0001799c
Sub-classes efo:EFO_0003164c
efo:EFO_0003153c
efo:EFO_0003157c

obsolete_Asian Indianc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0003153
Super-classes efo:EFO_0003152c

obsolete_Chinesec # Classes

URI http://www.ebi.ac.uk/efo/EFO_0003157
Super-classes efo:EFO_0003152c

obsolete_European-Americanc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0003159
Super-classes efo:EFO_0003151c

obsolete_Japanesec # Classes

URI http://www.ebi.ac.uk/efo/EFO_0003164
Super-classes efo:EFO_0003152c

obsolete_Latinoc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0003166
Super-classes efo:EFO_0003151c
Sub-classes obo:ERO_0002090c
obo:ERO_0002087c

obsolete_Hispanicc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0003169
Super-classes efo:EFO_0001799c

risk factorc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0003919
Super-classes obo:BFO_0000016c
Sub-classes obo:OBIB_0000533c

hormone replacement therapyc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0003961
Super-classes obo:OGMS_0000090c
Sub-classes obo:OBIB_0000542c
obo:OBIB_0000540c
obo:OBIB_0000539c
obo:OBIB_0000541c

smoking behaviorc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0004318
Super-classes obo:OBI_0000011c
obo:GO_0008150c
Restrictions obo:OBI_0000293op some (obo:OBIB_0000044c or obo:OBIB_0000046c or obo:OBIB_0000055c)
Sub-classes obo:OBIB_0000052c

chewing tobacco behaviorc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0004774
Super-classes obo:GO_0008150c
obo:OBI_0000011c
Restrictions obo:OBI_0000293op some obo:OBIB_0000047c

date of birthc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0004950
Super-classes obo:IAO_0000416c
Sub-classes obo:OBIB_0000482c

date of diagnosisc # Classes

URI http://www.ebi.ac.uk/efo/EFO_0004953
Super-classes obo:IAO_0000416c

Obsolete Classc # Classes

URI http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
Super-classes owl:Thingc
Sub-classes obo:OMIABIS_00001013c
obo:OMIABIS_0001075c
obo:OMIABIS_0000912c
obo:OMIABIS_0000049c
obo:OBIB_0000210c
obo:OMIABIS_0000006c
obo:OMIABIS_0000026c
obo:OMIABIS_0001076c
obo:OBIB_0000211c
obo:BFO_0000005c
obo:OMIABIS_0001077c
obo:REO_0000280c
obo:OMIABIS_0000100c
obo:OMIABIS_0001003c

Thingc # Classes

URI http://www.w3.org/2002/07/owl#Thing
Sub-classes oboInOwl:ObsoleteClassc
obo:BFO_0000001c
Members obo:IAO_0000125
obo:IAO_0000122
obo:IAO_0000124
obo:IAO_0000103
obo:IAO_0000226
obo:IAO_0000123
obo:IAO_0000121
obo:IAO_0000120

Object Properties ↑

part ofop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000050
Inverse properties obo:BFO_0000051op

has partop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000051
Super-properties owl:topObjectPropertyop

realized inop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000054
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Description

Paraphrase of elucidation: a relation between a realizable entity and a process, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process
Super-properties owl:topObjectPropertyop
Inverse properties obo:BFO_0000055op
Domain(s) obo:BFO_0000017c
Range(s) obo:BFO_0000015c

realizesop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000055
Is Defined By http://purl.obolibrary.org/obo/iao.owl
Description

Paraphrase of elucidation: a relation between a process and a realizable entity, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process
Super-properties owl:topObjectPropertyop
Domain(s) obo:BFO_0000015c
Range(s) obo:BFO_0000017c

preceded byop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000062
Super-properties obo:RO_0002222op

precedesop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000063
Super-properties obo:RO_0002222op

occurs inop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000066
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Description

Paraphrase of definition: a relation between a process and an independent continuant, in which the process takes place entirely within the independent continuant
Inverse properties obo:BFO_0000067op
Domain(s) obo:BFO_0000003c
Range(s) obo:BFO_0000004c

contains processop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000067
Is Defined By http://purl.obolibrary.org/obo/bfo.owl
Description

Paraphrase of definition: a relation between an independent continuant and a process, in which the process takes place entirely within the independent continuant

has temporal occupantop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000156
Is Defined By http://purl.obolibrary.org/obo/bfo/2012-07-20/bfo.owl
Range(s) obo:BFO_0000003c

history ofop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000184
Is Defined By http://purl.obolibrary.org/obo/bfo/2012-07-20/bfo.owl
Super-properties obo:BFO_0000066op
Inverse properties obo:BFO_0000185op
Domain(s) obo:BFO_0000015c
Range(s) obo:BFO_0000040c

has historyop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000185
Is Defined By http://purl.obolibrary.org/obo/bfo/2012-07-20/bfo.owl
Super-properties obo:BFO_0000067op
Domain(s) obo:BFO_0000040c
Range(s) obo:BFO_0000015c

member ofop # OPs

URI http://purl.obolibrary.org/obo/GEO_000000012

has measurement unit labelop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000039
Super-properties obo:BFO_0000051op
Range(s) obo:IAO_0000003c

is aboutop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000136
Domain(s) obo:IAO_0000030c

mentionsop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000142
Super-properties obo:IAO_0000136op

denotesop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000219
Description
Super-properties obo:IAO_0000136op
Inverse properties obo:IAO_0000235op
Domain(s) obo:IAO_0000030c
Range(s) obo:BFO_0000001c

is quality measurement ofop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000221
Super-properties obo:IAO_0000136op
Inverse properties obo:IAO_0000417op
Domain(s) obo:IAO_0000109c
Range(s) obo:BFO_0000019c

denoted byop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000235
Domain(s) obo:BFO_0000001c
Range(s) obo:IAO_0000030c

is duration ofop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000413
Super-properties obo:IAO_0000136op
Domain(s) obo:IAO_0000416c
Range(s) obo:BFO_0000015c

is quality measured asop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000417

has time stampop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000581
Super-properties obo:BFO_0000051op
Domain(s) obo:IAO_0000582c
Range(s) obo:IAO_0000416c

has measurement datumop # OPs

URI http://purl.obolibrary.org/obo/IAO_0000583
Super-properties obo:BFO_0000051op
Domain(s) obo:IAO_0000582c
Range(s) http://purl.obolibrary.org/obo/IAO_0000109 ub385bL2980C13

designatesop # OPs

URI http://purl.obolibrary.org/obo/IAO_0020012
Inverse properties obo:IAO_0020018op
Domain(s) obo:IAO_0000030c
Range(s) obo:BFO_0000001c

is designated byop # OPs

URI http://purl.obolibrary.org/obo/IAO_0020018

results_inop # OPs

URI http://purl.obolibrary.org/obo/IDO_0000660

has maximum capacityop # OPs

URI http://purl.obolibrary.org/obo/OBIB_0000037
Domain(s) obo:OBI_0000967c
Range(s) obo:IAO_0000109c

has actual loadop # OPs

URI http://purl.obolibrary.org/obo/OBIB_0000038
Domain(s) obo:OBI_0000967c
Range(s) obo:IAO_0000109c

provides_service_consumer_withop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000107
Super-properties obo:BFO_0000051op
Domain(s) obo:OBI_0001173c

is_supported_by_dataop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000124
Domain(s) obo:OBI_0001909c
Range(s) obo:IAO_0000027c

has_specified_inputop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000293
Super-properties obo:RO_0000057op
Inverse properties obo:OBI_0000295op
Domain(s) obo:OBI_0000011c

is_specified_input_ofop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000295
Super-properties obo:RO_0000056op
Range(s) obo:OBI_0000011c

has_specified_outputop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000299
Super-properties obo:RO_0000057op
Inverse properties obo:OBI_0000312op
Domain(s) obo:OBI_0000011c

is_specified_output_ofop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000312
Super-properties obo:RO_0000056op
Range(s) obo:OBI_0000011c

achieves_planned_objectiveop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000417
Inverse properties obo:OBI_0000833op
Domain(s) obo:OBI_0000011c
Range(s) obo:IAO_0000005c

has grainop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000643
Super-properties obo:BFO_0000051op

objective_achieved_byop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000833
Domain(s) obo:IAO_0000005c
Range(s) obo:OBI_0000011c

is member of organizationop # OPs

URI http://purl.obolibrary.org/obo/OBI_0000846
Inverse properties obo:OBI_0001688op
Domain(s) (obo:NCBITaxon_9606c or obo:OBI_0000245c)
Range(s) obo:OBI_0000245c

has disposition to bindop # OPs

URI http://purl.obolibrary.org/obo/OBI_0001637
Domain(s) obo:BFO_0000040c
Range(s) obo:BFO_0000040c

has organization memberop # OPs

URI http://purl.obolibrary.org/obo/OBI_0001688
Domain(s) obo:OBI_0000245c
Range(s) http://purl.obolibrary.org/obo/NCBITaxon_9606 http://purl.obolibrary.org/obo/OBI_0000245

specifies value ofop # OPs

URI http://purl.obolibrary.org/obo/OBI_0001927
Super-properties obo:IAO_0000136op
Domain(s) obo:OBI_0001933c

has value specificationop # OPs

URI http://purl.obolibrary.org/obo/OBI_0001938
Super-properties obo:BFO_0000051op
Domain(s) obo:IAO_0000030c
Range(s) obo:OBI_0001933c

ownsop # OPs

URI http://purl.obolibrary.org/obo/OMIABIS_0000008
Source Reinach, A. Sämtliche Werke. Texkritische Ausgabe, München: Philosophia Verlag, 1989, p.189-204.
Super-properties owl:topObjectPropertyop
Inverse properties obo:OMIABIS_0000048op
Domain(s) (obo:NCBITaxon_9606c or obo:OBI_0000245c or obo:OMRSE_00000023c or obo:OMRSE_00000033c)
Range(s) http://purl.obolibrary.org/obo/BFO_0000040 http://purl.obolibrary.org/obo/IAO_0000030

administratesop # OPs

URI http://purl.obolibrary.org/obo/OMIABIS_0000009
Description

A definition of "tranfers" object property can be found in d-acts: http:purl.obolibrary.org/iao/d-acts.owl
Domain(s) (obo:NCBITaxon_9606c or obo:OBI_0000245c or obo:OMRSE_00000023c or obo:OMRSE_00000033c)
Range(s) http://purl.obolibrary.org/obo/BFO_0000040 http://purl.obolibrary.org/obo/IAO_0000030

is contact information aboutop # OPs

URI http://purl.obolibrary.org/obo/OMIABIS_0000042
Super-properties obo:IAO_0000136op
Domain(s) obo:IAO_0000030c
Range(s) http://purl.obolibrary.org/obo/NCBITaxon_9606 http://purl.obolibrary.org/obo/OBI_0000245

is owned byop # OPs

URI http://purl.obolibrary.org/obo/OMIABIS_0000048
Domain(s) (obo:BFO_0000040c or obo:IAO_0000030c)
Range(s) http://purl.obolibrary.org/obo/NCBITaxon_9606 http://purl.obolibrary.org/obo/OBI_0000245 http://purl.obolibrary.org/obo/OMRSE_00000023 http://purl.obolibrary.org/obo/OMRSE_00000033

inheres inop # OPs

URI http://purl.obolibrary.org/obo/RO_0000052
Inverse properties obo:RO_0000053op

bearer_ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000053
Range(s) obo:BFO_0000020c

participates inop # OPs

URI http://purl.obolibrary.org/obo/RO_0000056
Inverse properties obo:RO_0000057op
Domain(s) obo:BFO_0000002c
Range(s) obo:BFO_0000003c

has participantop # OPs

URI http://purl.obolibrary.org/obo/RO_0000057
Source http://www.obofoundry.org/ro/#OBO_REL:has_participant
Domain(s) obo:BFO_0000003c
Range(s) obo:BFO_0000002c

is concretized asop # OPs

URI http://purl.obolibrary.org/obo/RO_0000058
Super-properties owl:topObjectPropertyop
Inverse properties obo:RO_0000059op
Domain(s) obo:BFO_0000031c
Range(s) obo:BFO_0000020c

concretizesop # OPs

URI http://purl.obolibrary.org/obo/RO_0000059
Description

It is recommended to not use this if possible in OMRSE. According to OntoBee this relation has been obsoleted and replaced with 'concretization of at all times'. As of Dec. 2, 2013 iao-main still uses this relation.

Super-properties owl:topObjectPropertyop
Domain(s) obo:BFO_0000020c
Range(s) obo:BFO_0000031c

function ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000079
Super-properties obo:RO_0000052op
Inverse properties obo:RO_0000085op
Domain(s) obo:BFO_0000034c

quality ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000080
Super-properties obo:RO_0000052op
Inverse properties obo:RO_0000086op

role ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000081
Super-properties obo:RO_0000052op
Inverse properties obo:RO_0000087op

has functionop # OPs

URI http://purl.obolibrary.org/obo/RO_0000085
Super-properties obo:RO_0000053op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000034c

has qualityop # OPs

URI http://purl.obolibrary.org/obo/RO_0000086
Super-properties obo:RO_0000053op
Range(s) obo:BFO_0000019c

has roleop # OPs

URI http://purl.obolibrary.org/obo/RO_0000087
Super-properties obo:RO_0000053op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000023c

has dispositionop # OPs

URI http://purl.obolibrary.org/obo/RO_0000091
Super-properties obo:RO_0000053op
Inverse properties obo:RO_0000092op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000016c

disposition ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0000092
Super-properties obo:RO_0000052op

derives fromop # OPs

URI http://purl.obolibrary.org/obo/RO_0001000
Super-properties owl:topObjectPropertyop
Inverse properties obo:RO_0001001op
Domain(s) obo:BFO_0000004c
Range(s) obo:BFO_0000004c

derives intoop # OPs

URI http://purl.obolibrary.org/obo/RO_0001001

location ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0001015
Inverse properties obo:RO_0001025op

located inop # OPs

URI http://purl.obolibrary.org/obo/RO_0001025
Source http://www.obofoundry.org/ro/#OBO_REL:located_in
Domain(s) obo:BFO_0000004c (obo:BFO_0000004c and ub385bL25276C13c)
Range(s) obo:BFO_0000004c http://purl.obolibrary.org/obo/BFO_0000004 ub385bL25286C13

2D boundary ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002000
Inverse properties obo:RO_0002002op

has 2D boundaryop # OPs

URI http://purl.obolibrary.org/obo/RO_0002002
Domain(s) obo:BFO_0000040c
Range(s) obo:BFO_0000141c

has componentop # OPs

URI http://purl.obolibrary.org/obo/RO_0002180
Super-properties obo:BFO_0000051op

regulatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002211
Domain(s) obo:BFO_0000015c
Range(s) obo:BFO_0000015c

negatively regulatesop # OPs

URI http://purl.obolibrary.org/obo/RO_0002212
Super-properties obo:RO_0002211op

temporal relationop # OPs

URI http://purl.obolibrary.org/obo/RO_0002222
Description

A relation that holds between two occurrents. This is a grouping relation that collects together all the Allen relations.
Range(s) obo:BFO_0000003c

startsop # OPs

URI http://purl.obolibrary.org/obo/RO_0002223
Super-properties obo:BFO_0000050op obo:RO_0002222op

has inputop # OPs

URI http://purl.obolibrary.org/obo/RO_0002233
Super-properties obo:RO_0000057op

has outputop # OPs

URI http://purl.obolibrary.org/obo/RO_0002234
Super-properties obo:RO_0000057op

results in formation ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002297
Super-properties obo:IDO_0000660op

member ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002350
Super-properties obo:BFO_0000050op
Inverse properties obo:RO_0002351op

has memberop # OPs

URI http://purl.obolibrary.org/obo/RO_0002351
Super-properties obo:BFO_0000051op

input ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002352
Super-properties obo:RO_0000056op

output ofop # OPs

URI http://purl.obolibrary.org/obo/RO_0002353
Super-properties obo:RO_0000056op

lacks_partop # OPs

URI http://purl.obolibrary.org/obo/cl#lacks_part

topObjectPropertyop # OPs

URI http://www.w3.org/2002/07/owl#topObjectProperty

Functional Properties ↑

has measurement valuefp # FPs

URI http://purl.obolibrary.org/obo/IAO_0000004
Domain(s) obo:IAO_0000032c
Range(s) xsd:doublec

Datatype Properties ↑

has specified numeric valuedp # DPs

URI http://purl.obolibrary.org/obo/OBI_0001937
Super-properties obo:OBI_0002135dp
Domain(s) obo:OBI_0001933c
Range(s) owl:realc

has specified valuedp # DPs

URI http://purl.obolibrary.org/obo/OBI_0002135
Domain(s) obo:OBI_0001933c

Annotation Properties ↑

defaultLanguageap # APs

URI http://protege.stanford.edu/plugins/owl/protege#defaultLanguage

BFO OWL specification labelap # APs

URI http://purl.obolibrary.org/obo/BFO_0000179
Super-properties rdfs:labelap

BFO CLIF specification labelap # APs

URI http://purl.obolibrary.org/obo/BFO_0000180
Super-properties rdfs:labelap

editor preferred termap # APs

URI http://purl.obolibrary.org/obo/IAO_0000111
Is Defined By http://purl.obolibrary.org/obo/iao.owl

example of usageap # APs

URI http://purl.obolibrary.org/obo/IAO_0000112
Is Defined By http://purl.obolibrary.org/obo/iao.owl

has curation statusap # APs

URI http://purl.obolibrary.org/obo/IAO_0000114

definitionap # APs

URI http://purl.obolibrary.org/obo/IAO_0000115
Is Defined By http://purl.obolibrary.org/obo/iao.owl

editor noteap # APs

URI http://purl.obolibrary.org/obo/IAO_0000116
Is Defined By http://purl.obolibrary.org/obo/iao.owl

term editorap # APs

URI http://purl.obolibrary.org/obo/IAO_0000117
Is Defined By http://purl.obolibrary.org/obo/iao.owl

alternative termap # APs

URI http://purl.obolibrary.org/obo/IAO_0000118
Is Defined By http://purl.obolibrary.org/obo/iao.owl

definition sourceap # APs

URI http://purl.obolibrary.org/obo/IAO_0000119
Is Defined By http://purl.obolibrary.org/obo/iao.owl

has obsolescence reasonap # APs

URI http://purl.obolibrary.org/obo/IAO_0000231

curator noteap # APs

URI http://purl.obolibrary.org/obo/IAO_0000232
Is Defined By http://purl.obolibrary.org/obo/iao.owl

term tracker itemap # APs

URI http://purl.obolibrary.org/obo/IAO_0000233
Description

The 'tracker item' can associate a tracker with a specific ontology term.

ontology term requesterap # APs

URI http://purl.obolibrary.org/obo/IAO_0000234
Description

The 'term requester' can credit the person, organization or project who request the ontology term.

imported fromap # APs

URI http://purl.obolibrary.org/obo/IAO_0000412
Is Defined By http://purl.obolibrary.org/obo/iao.owl

expand expression toap # APs

URI http://purl.obolibrary.org/obo/IAO_0000424

OBO foundry unique labelap # APs

URI http://purl.obolibrary.org/obo/IAO_0000589

elucidationap # APs

URI http://purl.obolibrary.org/obo/IAO_0000600
Is Defined By http://purl.obolibrary.org/obo/iao.owl

has associated axiom(nl)ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000601
Is Defined By http://purl.obolibrary.org/obo/iao.owl

has associated axiom(fol)ap # APs

URI http://purl.obolibrary.org/obo/IAO_0000602
Is Defined By http://purl.obolibrary.org/obo/iao.owl

has axiom labelap # APs

URI http://purl.obolibrary.org/obo/IAO_0010000
Is Defined By http://purl.obolibrary.org/obo/iao.owl

term replaced byap # APs

URI http://purl.obolibrary.org/obo/IAO_0100001
Description

Add as annotation triples in the granting ontology

ISA alternative termap # APs

URI http://purl.obolibrary.org/obo/OBI_0001847
Super-properties obo:IAO_0000118ap

NIAID GSCID-BRC alternative termap # APs

URI http://purl.obolibrary.org/obo/OBI_0001886
Super-properties obo:IAO_0000118ap

IEDB alternative termap # APs

URI http://purl.obolibrary.org/obo/OBI_9991118
Super-properties obo:IAO_0000118ap

temporal interpretationap # APs

URI http://purl.obolibrary.org/obo/RO_0001900

Contributorap # APs

URI http://purl.org/dc/elements/1.1/contributor
Is Defined By http://purl.org/dc/elements/1.1/

Creatorap # APs

URI http://purl.org/dc/elements/1.1/creator
Is Defined By http://purl.org/dc/elements/1.1/

Dateap # APs

URI http://purl.org/dc/elements/1.1/date
Is Defined By http://purl.org/dc/elements/1.1/

Descriptionap # APs

URI http://purl.org/dc/elements/1.1/description
Is Defined By http://purl.org/dc/elements/1.1/

Formatap # APs

URI http://purl.org/dc/elements/1.1/format
Is Defined By http://purl.org/dc/elements/1.1/

licenseap # APs

URI http://purl.org/dc/elements/1.1/license

memberap # APs

URI http://purl.org/dc/elements/1.1/member

Sourceap # APs

URI http://purl.org/dc/elements/1.1/source
Is Defined By http://purl.org/dc/elements/1.1/

Subject and Keywordsap # APs

URI http://purl.org/dc/elements/1.1/subject
Is Defined By http://purl.org/dc/elements/1.1/

titleap # APs

URI http://purl.org/dc/elements/1.1/title

licenseap # APs

URI http://purl.org/dc/terms/license

titleap # APs

URI http://purl.org/dc/terms/title

definitionap # APs

URI http://www.ebi.ac.uk/efo/definition

hasOBONamespaceap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasOBONamespace

shorthandap # APs

URI http://www.geneontology.org/formats/oboInOwl#shorthand

typeap # APs

URI http://www.w3.org/1999/02/22-rdf-syntax-ns#type

commentap # APs

URI http://www.w3.org/2000/01/rdf-schema#comment

isDefinedByap # APs

URI http://www.w3.org/2000/01/rdf-schema#isDefinedBy

labelap # APs

URI http://www.w3.org/2000/01/rdf-schema#label

seeAlsoap # APs

URI http://www.w3.org/2000/01/rdf-schema#seeAlso

homepageap # APs

URI http://xmlns.com/foaf/0.1/homepage

mboxap # APs

URI http://xmlns.com/foaf/0.1/mbox

pageap # APs

URI http://xmlns.com/foaf/0.1/page

Named Individuals ↑

geographic locationni

Class(es)
owl:Class
rdfs:Class
URI http://purl.obolibrary.org/obo/GAZ_00000448

example to be eventually removedni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000002

failed exploratory termni

Class(es)
obo:IAO_0000225
owl:Thing
URI http://purl.obolibrary.org/obo/IAO_0000103

metadata completeni

Class(es)
obo:IAO_0000078
owl:Thing
URI http://purl.obolibrary.org/obo/IAO_0000120

organizational termni

Class(es)
obo:IAO_0000078
owl:Thing
URI http://purl.obolibrary.org/obo/IAO_0000121

ready for releaseni

Class(es)
obo:IAO_0000078
owl:Thing
URI http://purl.obolibrary.org/obo/IAO_0000122

metadata incompleteni

Class(es)
obo:IAO_0000078
owl:Thing
URI http://purl.obolibrary.org/obo/IAO_0000123

uncuratedni

Class(es)
obo:IAO_0000078
owl:Thing
URI http://purl.obolibrary.org/obo/IAO_0000124

pending final vettingni

Class(es)
obo:IAO_0000078
owl:Thing
URI http://purl.obolibrary.org/obo/IAO_0000125

placeholder removedni

Class(es)
obo:IAO_0000225
owl:Thing
URI http://purl.obolibrary.org/obo/IAO_0000226

terms mergedni

Class(es)
obo:IAO_0000225
URI http://purl.obolibrary.org/obo/IAO_0000227

term importedni

Class(es)
obo:IAO_0000225
URI http://purl.obolibrary.org/obo/IAO_0000228

term splitni

Class(es)
obo:IAO_0000225
URI http://purl.obolibrary.org/obo/IAO_0000229

universalni

Class(es)
obo:IAO_0000409
URI http://purl.obolibrary.org/obo/IAO_0000410

defined classni

Class(es)
obo:IAO_0000409
URI http://purl.obolibrary.org/obo/IAO_0000420

named class expressionni

Class(es)
obo:IAO_0000409
URI http://purl.obolibrary.org/obo/IAO_0000421

to be replaced with external ontology termni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000423

requires discussionni

Class(es)
obo:IAO_0000078
URI http://purl.obolibrary.org/obo/IAO_0000428

Affymetrixni

Class(es)
ub385bL11265C45
ub385bL11269C8
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0000462

Thermoni

Class(es)
obo:OBI_0000245
ub385bL11574C45
URI http://purl.obolibrary.org/obo/OBI_0000752

Watersni

Class(es)
ub385bL11585C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0000753

BIO-RADni

Class(es)
ub385bL11596C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0000754

Ambionni

Class(es)
ub385bL11607C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0000756

Helicosni

Class(es)
ub385bL11618C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0000757

Rocheni

Class(es)
ub385bL11629C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0000758

Illuminani

Class(es)
obo:OBI_0000245
ub385bL11640C45
URI http://purl.obolibrary.org/obo/OBI_0000759

Agilentni

Class(es)
obo:OBI_0000245
ub385bL11651C45
URI http://purl.obolibrary.org/obo/OBI_0000765

Li-Corni

Class(es)
ub385bL11662C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0000769

Bruker Corporationni

Class(es)
obo:OBI_0000245
ub385bL11673C45
URI http://purl.obolibrary.org/obo/OBI_0000770

Applied Biosystemsni

Class(es)
ub385bL11684C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0000776

Bruker Daltonicsni

Class(es)
ub385bL11695C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0000779

Sysmex Corporation, Kobe, Japanni

Class(es)
ub385bL11740C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0000829

U.S. Food and Drug Administrationni

Class(es)
ub385bL11917C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0000901

Edingburgh handedness inventoryni

Class(es)
obo:OBI_0001000
URI http://purl.obolibrary.org/obo/OBI_0001004

eBioscienceni

Class(es)
obo:OBI_0000245
ub385bL12665C45
URI http://purl.obolibrary.org/obo/OBI_0001213

Cytopeiani

Class(es)
ub385bL12678C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001224

Exalpha Biologicalni

Class(es)
ub385bL12691C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001287

Apogee Flow Systemsni

Class(es)
ub385bL12704C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001312

Exbio Antibodiesni

Class(es)
obo:OBI_0000245
ub385bL12717C45
URI http://purl.obolibrary.org/obo/OBI_0001320

Becton Dickinson (BD Biosciences)ni

Class(es)
obo:OBI_0000245
ub385bL12730C45
URI http://purl.obolibrary.org/obo/OBI_0001321

Dako Cytomationni

Class(es)
obo:OBI_0000245
ub385bL12743C45
URI http://purl.obolibrary.org/obo/OBI_0001338

Milliporeni

Class(es)
ub385bL12756C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001340

Antigenixni

Class(es)
obo:OBI_0000245
ub385bL12769C45
URI http://purl.obolibrary.org/obo/OBI_0001347

Partecni

Class(es)
ub385bL12782C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001355

Beckman Coulterni

Class(es)
ub385bL12795C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001372

Advanced Instruments Inc. (AI Companies)ni

Class(es)
ub385bL12808C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001375

Miltenyi Biotecni

Class(es)
ub385bL12870C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001424

AES Chemunexni

Class(es)
ub385bL12883C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001428

Bentley Instrumentsni

Class(es)
obo:OBI_0000245
ub385bL12896C45
URI http://purl.obolibrary.org/obo/OBI_0001431

Invitrogenni

Class(es)
ub385bL12909C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001434

Luminexni

Class(es)
ub385bL12922C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001443

CytoBuoyni

Class(es)
ub385bL12935C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0001458

Nimblegenni

Class(es)
obo:OBI_0000245
ub385bL13185C45
URI http://purl.obolibrary.org/obo/OBI_0001855

Pacific Biosciencesni

Class(es)
obo:OBI_0000245
ub385bL13197C45
URI http://purl.obolibrary.org/obo/OBI_0001856

NanoString Technologiesni

Class(es)
obo:OBI_0000245
ub385bL13208C45
URI http://purl.obolibrary.org/obo/OBI_0001860

0-non autolyisni

Class(es)
obo:OBIB_0000087
URI http://purl.obolibrary.org/obo/OBI_0002009

1-slight autolysisni

Class(es)
obo:OBIB_0000087
URI http://purl.obolibrary.org/obo/OBI_0002010

2-moderate autolysisni

Class(es)
obo:OBIB_0000087
URI http://purl.obolibrary.org/obo/OBI_0002011

3-severe autolysisni

Class(es)
obo:OBIB_0000087
URI http://purl.obolibrary.org/obo/OBI_0002012

Thermo Fisher Scientificni

Class(es)
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0002193

G1: Well differentiatedni

Class(es)
obo:OBI_0002205
URI http://purl.obolibrary.org/obo/OBI_0002206

G2: Moderately differentiatedni

Class(es)
obo:OBI_0002205
URI http://purl.obolibrary.org/obo/OBI_0002207

G3: Poorly differentiatedni

Class(es)
obo:OBI_0002205
URI http://purl.obolibrary.org/obo/OBI_0002208

G4: Undifferentiatedni

Class(es)
obo:OBI_0002205
URI http://purl.obolibrary.org/obo/OBI_0002209

G1 (Fuhrman)ni

Class(es)
obo:OBI_0002210
URI http://purl.obolibrary.org/obo/OBI_0002211

G2 (Fuhrman)ni

Class(es)
obo:OBI_0002210
URI http://purl.obolibrary.org/obo/OBI_0002212

G3 (Fuhrman)ni

Class(es)
obo:OBI_0002210
URI http://purl.obolibrary.org/obo/OBI_0002213

G4 (Fuhrman)ni

Class(es)
obo:OBI_0002210
URI http://purl.obolibrary.org/obo/OBI_0002214

Low grade ovarian tumorni

Class(es)
obo:OBI_0002216
URI http://purl.obolibrary.org/obo/OBI_0002217

High grade ovarian tumorni

Class(es)
obo:OBI_0002216
URI http://purl.obolibrary.org/obo/OBI_0002218

G1 (WHO)ni

Class(es)
obo:OBI_0002219
URI http://purl.obolibrary.org/obo/OBI_0002220

G2 (WHO)ni

Class(es)
obo:OBI_0002219
URI http://purl.obolibrary.org/obo/OBI_0002221

G3 (WHO)ni

Class(es)
obo:OBI_0002219
URI http://purl.obolibrary.org/obo/OBI_0002222

G4 (WHO)ni

Class(es)
obo:OBI_0002219
URI http://purl.obolibrary.org/obo/OBI_0002223

pT0 (colon)ni

Class(es)
obo:OBI_0002224
URI http://purl.obolibrary.org/obo/OBI_0002225

pTis (colon)ni

Class(es)
obo:OBI_0002224
URI http://purl.obolibrary.org/obo/OBI_0002226

pT1 (colon)ni

Class(es)
obo:OBI_0002224
URI http://purl.obolibrary.org/obo/OBI_0002227

pT2 (colon)ni

Class(es)
obo:OBI_0002224
URI http://purl.obolibrary.org/obo/OBI_0002228

pT3 (colon)ni

Class(es)
obo:OBI_0002224
URI http://purl.obolibrary.org/obo/OBI_0002229

pT4a (colon)ni

Class(es)
obo:OBI_0002224
URI http://purl.obolibrary.org/obo/OBI_0002230

pT4b (colon)ni

Class(es)
obo:OBI_0002224
URI http://purl.obolibrary.org/obo/OBI_0002231

pT0 (lung)ni

Class(es)
obo:OBI_0002232
URI http://purl.obolibrary.org/obo/OBI_0002233

pTis (lung)ni

Class(es)
obo:OBI_0002232
URI http://purl.obolibrary.org/obo/OBI_0002234

pT1 (lung)ni

Class(es)
obo:OBI_0002232
URI http://purl.obolibrary.org/obo/OBI_0002235

pT1a (lung)ni

Class(es)
obo:OBI_0002232
URI http://purl.obolibrary.org/obo/OBI_0002236

pT1b (lung)ni

Class(es)
obo:OBI_0002232
URI http://purl.obolibrary.org/obo/OBI_0002237

pT2 (lung)ni

Class(es)
obo:OBI_0002232
URI http://purl.obolibrary.org/obo/OBI_0002238

pT2a (lung)ni

Class(es)
obo:OBI_0002232
URI http://purl.obolibrary.org/obo/OBI_0002239

pT2b (lung)ni

Class(es)
obo:OBI_0002232
URI http://purl.obolibrary.org/obo/OBI_0002240

pT3 (lung)ni

Class(es)
obo:OBI_0002232
URI http://purl.obolibrary.org/obo/OBI_0002241

pT4 (lung)ni

Class(es)
obo:OBI_0002232
URI http://purl.obolibrary.org/obo/OBI_0002242

pT0 (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002244

pT1 (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002245

pT1a (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002246

pT1b (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002247

pT2 (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002248

pT2a (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002249

pT2b (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002250

pT3 (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002251

pT3a (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002252

pT3b (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002253

pT3c (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002254

pT4 (kidney)ni

Class(es)
obo:OBI_0002243
URI http://purl.obolibrary.org/obo/OBI_0002255

pT0 (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002257

pT1 (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002258

pT1a (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002259

pT1b (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002260

pT1c (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002261

pT2 (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002262

pT2a (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002263

pT2b (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002264

pT2c (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002265

pT3 (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002266

pT3a (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002267

pT3b (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002268

pT3c (ovary)ni

Class(es)
obo:OBI_0002256
URI http://purl.obolibrary.org/obo/OBI_0002269

pN0 (colon)ni

Class(es)
obo:OBI_0002270
URI http://purl.obolibrary.org/obo/OBI_0002271

pN1 (colon)ni

Class(es)
obo:OBI_0002270
URI http://purl.obolibrary.org/obo/OBI_0002272

pN1a (colon)ni

Class(es)
obo:OBI_0002270
URI http://purl.obolibrary.org/obo/OBI_0002273

pN1b (colon)ni

Class(es)
obo:OBI_0002270
URI http://purl.obolibrary.org/obo/OBI_0002274

pN1c (colon)ni

Class(es)
obo:OBI_0002270
URI http://purl.obolibrary.org/obo/OBI_0002275

pN2 (colon)ni

Class(es)
obo:OBI_0002270
URI http://purl.obolibrary.org/obo/OBI_0002276

pN2a (colon)ni

Class(es)
obo:OBI_0002270
URI http://purl.obolibrary.org/obo/OBI_0002277

pN2b (colon)ni

Class(es)
obo:OBI_0002270
URI http://purl.obolibrary.org/obo/OBI_0002278

pN0 (lung)ni

Class(es)
obo:OBI_0002279
URI http://purl.obolibrary.org/obo/OBI_0002280

pN1 (lung)ni

Class(es)
obo:OBI_0002279
URI http://purl.obolibrary.org/obo/OBI_0002281

pN2 (lung)ni

Class(es)
obo:OBI_0002279
URI http://purl.obolibrary.org/obo/OBI_0002282

pN3 (lung)ni

Class(es)
obo:OBI_0002279
URI http://purl.obolibrary.org/obo/OBI_0002283

pN0 (kidney)ni

Class(es)
obo:OBI_0002284
URI http://purl.obolibrary.org/obo/OBI_0002285

pN1 (kidney)ni

Class(es)
obo:OBI_0002284
URI http://purl.obolibrary.org/obo/OBI_0002286

pN0 (ovary)ni

Class(es)
obo:OBI_0002287
URI http://purl.obolibrary.org/obo/OBI_0002288

pN1 (ovary)ni

Class(es)
obo:OBI_0002287
URI http://purl.obolibrary.org/obo/OBI_0002289

cM0 (colon)ni

Class(es)
obo:OBI_0002290
URI http://purl.obolibrary.org/obo/OBI_0002291

cM1 (colon)ni

Class(es)
obo:OBI_0002290
URI http://purl.obolibrary.org/obo/OBI_0002292

cM1a (colon)ni

Class(es)
obo:OBI_0002290
URI http://purl.obolibrary.org/obo/OBI_0002293

cM1b (colon)ni

Class(es)
obo:OBI_0002290
URI http://purl.obolibrary.org/obo/OBI_0002294

pM1 (colon)ni

Class(es)
obo:OBI_0002290
URI http://purl.obolibrary.org/obo/OBI_0002295

pM1a (colon)ni

Class(es)
obo:OBI_0002290
URI http://purl.obolibrary.org/obo/OBI_0002296

pM1b (colon)ni

Class(es)
obo:OBI_0002290
URI http://purl.obolibrary.org/obo/OBI_0002297

cM0 (lung)ni

Class(es)
obo:OBI_0002298
URI http://purl.obolibrary.org/obo/OBI_0002299

cM1 (lung)ni

Class(es)
obo:OBI_0002298
URI http://purl.obolibrary.org/obo/OBI_0002300

cM1a (lung)ni

Class(es)
obo:OBI_0002298
URI http://purl.obolibrary.org/obo/OBI_0002301

cM1b (lung)ni

Class(es)
obo:OBI_0002298
URI http://purl.obolibrary.org/obo/OBI_0002302

pM1 (lung)ni

Class(es)
obo:OBI_0002298
URI http://purl.obolibrary.org/obo/OBI_0002303

pM1a (lung)ni

Class(es)
obo:OBI_0002298
URI http://purl.obolibrary.org/obo/OBI_0002304

pM1b (lung)ni

Class(es)
obo:OBI_0002298
URI http://purl.obolibrary.org/obo/OBI_0002305

cM0 (kidney)ni

Class(es)
obo:OBI_0002306
URI http://purl.obolibrary.org/obo/OBI_0002307

cM1 (kidney)ni

Class(es)
obo:OBI_0002306
URI http://purl.obolibrary.org/obo/OBI_0002308

pM1 (kidney)ni

Class(es)
obo:OBI_0002306
URI http://purl.obolibrary.org/obo/OBI_0002309

cM0 (ovary)ni

Class(es)
obo:OBI_0002310
URI http://purl.obolibrary.org/obo/OBI_0002311

cM1 (ovary)ni

Class(es)
obo:OBI_0002310
URI http://purl.obolibrary.org/obo/OBI_0002312

pM1 (ovary)ni

Class(es)
obo:OBI_0002310
URI http://purl.obolibrary.org/obo/OBI_0002313

Occult Carcinoma (AJCC 7th)ni

Class(es)
obo:OBI_0002314
URI http://purl.obolibrary.org/obo/OBI_0002315

Stage 0 (AJCC 7th)ni

Class(es)
obo:OBI_0002314
URI http://purl.obolibrary.org/obo/OBI_0002316

Stage I (AJCC 7th)ni

Class(es)
obo:OBI_0002314
URI http://purl.obolibrary.org/obo/OBI_0002317

Stage IIA (AJCC 7th)ni

Class(es)
obo:OBI_0002314
URI http://purl.obolibrary.org/obo/OBI_0002318

Stage IIB (AJCC 7th)ni

Class(es)
obo:OBI_0002314
URI http://purl.obolibrary.org/obo/OBI_0002319

Stage IIC (AJCC 7th)ni

Class(es)
obo:OBI_0002314
URI http://purl.obolibrary.org/obo/OBI_0002320

Stage IIIA (AJCC 7th)ni

Class(es)
obo:OBI_0002314
URI http://purl.obolibrary.org/obo/OBI_0002321

Stage IIIB (AJCC 7th)ni

Class(es)
obo:OBI_0002314
URI http://purl.obolibrary.org/obo/OBI_0002322

Stage IIIC (AJCC 7th)ni

Class(es)
obo:OBI_0002314
URI http://purl.obolibrary.org/obo/OBI_0002323

Stage IVA (AJCC 7th)ni

Class(es)
obo:OBI_0002314
URI http://purl.obolibrary.org/obo/OBI_0002324

Stage IVB (AJCC 7th)ni

Class(es)
obo:OBI_0002314
URI http://purl.obolibrary.org/obo/OBI_0002325

Stage IA (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002327

Stage IA1 (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002328

Stage IA2 (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002329

Stage IB (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002330

Stage IB1 (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002331

Stage IB2 (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002332

Stage IIA (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002333

Stage IIA1 (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002334

Stage IIA2 (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002335

Stage IIB (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002336

Stage IIIA (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002337

Stage IIIB (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002338

Stage IVA (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002339

Stage IVB (FIGO)ni

Class(es)
obo:OBI_0002326
URI http://purl.obolibrary.org/obo/OBI_0002340

Stage 1 (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002342

Stage 1A (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002343

Stage 1B (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002344

Stage 1C (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002345

Stage 2 (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002346

Stage 2A (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002347

Stage 2B (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002348

Stage 2C (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002349

Stage 3 (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002350

Stage 3A (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002351

Stage 3B (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002352

Stage 3C (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002353

Stage 4 (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002354

Stage Unknown (FIGO)ni

Class(es)
obo:OBI_0002341
URI http://purl.obolibrary.org/obo/OBI_0002355

3: symptomatic in bed more than 50% of the day but not bed riddenni

Class(es)
obo:OBI_0002357
URI http://purl.obolibrary.org/obo/OBI_0002358

2: symptomatic but in bed less than 50% of the dayni

Class(es)
obo:OBI_0002357
URI http://purl.obolibrary.org/obo/OBI_0002359

4: bed riddenni

Class(es)
obo:OBI_0002357
URI http://purl.obolibrary.org/obo/OBI_0002360

0: asymptomaticni

Class(es)
obo:OBI_0002357
URI http://purl.obolibrary.org/obo/OBI_0002361

1: symptomatic but fully ambulatoryni

Class(es)
obo:OBI_0002357
URI http://purl.obolibrary.org/obo/OBI_0002362

100: asymptomaticni

Class(es)
obo:OBI_0002363
URI http://purl.obolibrary.org/obo/OBI_0002364

80-90: symptomatic but fully ambulatoryni

Class(es)
obo:OBI_0002363
URI http://purl.obolibrary.org/obo/OBI_0002365

60-70: symptomatic but in bed less than 50% of the dayni

Class(es)
obo:OBI_0002363
URI http://purl.obolibrary.org/obo/OBI_0002366

40-50: symptomatic, in bed more than 50% of the day, but not bed riddenni

Class(es)
obo:OBI_0002363
URI http://purl.obolibrary.org/obo/OBI_0002367

Oxford Nanopore Technologiesni

Class(es)
ub385bL19907C45
obo:OBI_0000245
URI http://purl.obolibrary.org/obo/OBI_0002755

axiom holds for all timesni

URI http://purl.obolibrary.org/obo/RO_0001901

secondni

Class(es)
obo:UO_0000003
URI http://purl.obolibrary.org/obo/UO_0000010

degree Celsiusni

Class(es)
obo:UO_0000005
URI http://purl.obolibrary.org/obo/UO_0000027

minuteni

Class(es)
obo:UO_0000003
URI http://purl.obolibrary.org/obo/UO_0000031

hourni

Class(es)
obo:UO_0000003
URI http://purl.obolibrary.org/obo/UO_0000032

dayni

Class(es)
obo:UO_0000003
URI http://purl.obolibrary.org/obo/UO_0000033

weekni

Class(es)
obo:UO_0000003
URI http://purl.obolibrary.org/obo/UO_0000034

monthni

Class(es)
obo:UO_0000003
URI http://purl.obolibrary.org/obo/UO_0000035

yearni

Class(es)
obo:UO_0000003
URI http://purl.obolibrary.org/obo/UO_0000036

molarni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000062

millimolarni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000063

micromolarni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000064

nanomolarni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000065

picomolarni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000066

mass percentageni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000163

mass volume percentageni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000164

volume percentageni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000165

gram per literni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000175

milligram per milliliterni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000176

degree Fahrenheitni

Class(es)
obo:UO_0000005
URI http://purl.obolibrary.org/obo/UO_0000195

pHni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000196

milliliter per literni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000207

gram per deciliterni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000208

colony forming unit per volumeni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000212

microgram per literni

Class(es)
obo:UO_0000051
URI http://purl.obolibrary.org/obo/UO_0000301

iao.owlni

URI http://purl.obolibrary.org/obo/iao.owl

Ontology for Biomedical Investigationsni

URI http://purl.obolibrary.org/obo/obi.owl
Description Please cite the OBI consortium http://purl.obolibrary.org/obo/obi where traditional citation is called for. However it is adequate that individual terms be attributed simply by use of the identifying PURL for the term, in projects that refer to them.

Namespaces ↑

default (:)
http://purl.obolibrary.org/obo/obib.owl
core
http://vivoweb.org/ontology/core#
dc
http://purl.org/dc/elements/1.1/
efo
http://www.ebi.ac.uk/efo/
foaf
http://xmlns.com/foaf/0.1/
obo
http://purl.obolibrary.org/obo/
oboInOwl
http://www.geneontology.org/formats/oboInOwl#
owl
http://www.w3.org/2002/07/owl#
protege
http://protege.stanford.edu/plugins/owl/protege#
prov
http://www.w3.org/ns/prov#
rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#
rdfs
http://www.w3.org/2000/01/rdf-schema#
sdo
https://schema.org/
skos
http://www.w3.org/2004/02/skos/core#
terms
http://purl.org/dc/terms/
xsd
http://www.w3.org/2001/XMLSchema#

Legend

cClasses
opObject Properties
fpFunctional Properties
dpData Properties
dpAnnotation Properties
pProperties
niNamed Individuals