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Metadata

URI
http://purl.obolibrary.org/obo/olatdv.owl
Version URI
http://purl.obolibrary.org/obo/olatdv/releases/2020-03-10/olatdv.owl
Ontology RDF
RDF (turtle)

Description

adapted from MFO by Thorsten Henrich

Table of Contents

  1. Classes
  2. Object Properties
  3. Annotation Properties
  4. Namespaces
  5. Legend

Overview

Pictures say 1,000 words
Figure 1: Ontology overview

Classes ↑

developmental stagec # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000010
Sub-classes obo:OlatDv_0000210c
obo:OlatDv_0000070c
obo:OlatDv_0000140c
obo:OlatDv_0000040c
obo:OlatDv_0000310c
obo:OlatDv_0000120c
obo:OlatDv_0000400c
obo:OlatDv_0000180c
obo:OlatDv_0000280c
obo:OlatDv_0000250c
obo:OlatDv_0000290c
obo:OlatDv_0000150c
obo:OlatDv_0000470c
obo:OlatDv_0000330c
obo:OlatDv_0000090c
obo:OlatDv_0000320c
obo:OlatDv_0000060c
obo:OlatDv_0000350c
obo:OlatDv_0000270c
obo:OlatDv_0000100c
obo:OlatDv_0000380c
obo:OlatDv_0000190c
obo:OlatDv_0000050c
obo:OlatDv_0000430c
obo:OlatDv_0000260c
obo:OlatDv_0000420c
obo:OlatDv_0000130c
obo:OlatDv_0000230c
obo:OlatDv_0000200c
obo:OlatDv_0000460c
obo:OlatDv_0000340c
obo:OlatDv_0000170c
obo:OlatDv_0000240c
obo:OlatDv_0000390c
obo:OlatDv_0000030c
obo:OlatDv_0000220c
obo:OlatDv_0000410c
obo:OlatDv_0000370c
obo:OlatDv_0000450c
obo:OlatDv_0000020c
obo:OlatDv_0000440c
obo:OlatDv_0000360c
obo:OlatDv_0000080c
obo:OlatDv_0000110c
obo:OlatDv_0000160c
obo:OlatDv_0000300c

Medaka stage 0c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000020
Super-classes obo:OlatDv_0000010c

Medaka stage 1c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000030
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000020c

Medaka stage 2ac # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000040
Super-classes obo:OlatDv_0000010c

Medaka stage 2bc # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000050
Super-classes obo:OlatDv_0000010c

Medaka stage 3c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000060
Super-classes obo:OlatDv_0000010c

Medaka stage 4c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000070
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000060c

Medaka stage 5c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000080
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000070c

Medaka stage 6c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000090
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000080c

Medaka stage 7c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000100
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000090c

Medaka stage 8c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000110
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000100c

Medaka stage 9c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000120
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000110c

Medaka stage 10c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000130
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000120c

Medaka stage 11c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000140
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000130c

Medaka stage 12c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000150
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000140c

Medaka stage 13c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000160
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000150c

Medaka stage 14c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000170
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000160c

Medaka stage 15c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000180
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000170c

Medaka stage 16c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000190
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000180c

Medaka stage 17c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000200
Description

Head formation
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000190c

Medaka stage 18c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000210
Description

Optic bud formation
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000200c

Medaka stage 19c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000220
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000210c

Medaka stage 20c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000230
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000220c

Medaka stage 21c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000240
Description

Brain and otic vesicle formation
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000230c

Medaka stage 22c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000250
Description

Appearance of heart anlage
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000240c

Medaka stage 23c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000260
Description

Formation of tubular heart
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000250c

Medaka stage 24c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000270
Description

Start of heart beating
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000260c

Medaka stage 25c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000280
Description

Onset of blood circulation
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000270c

Medaka stage 26c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000290
Description

Development of guanophores and vacuolization of the notochord
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000280c

Medaka stage 27c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000300
Description

Appearance of pectoral fin bud
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000290c

Medaka stage 28c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000310
Description

Onset of retinal pigmentation
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000300c

Medaka stage 29c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000320
Description

Internal ear formation
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000310c

Medaka stage 30c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000330
Description

Blood vessel development
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000320c

Medaka stage 31c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000340
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000330c

Medaka stage 32c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000350
Description

Formation of pronephros and air bladder
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000340c

Medaka stage 33c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000360
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000350c

Medaka stage 34c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000370
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000360c

Medaka stage 35c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000380
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000370c

Medaka stage 36c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000390
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000380c

Medaka stage 37c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000400
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000390c

Medaka stage 38c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000410
Description

Differentiation of caudal fin begins
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000400c

Medaka stage 39c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000420
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000410c

Medaka stage 40c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000430
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000420c

Medaka stage 41c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000440
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000430c

Medaka stage 42c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000450
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000440c

Medaka stage 43c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000460
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000450c

Medaka stage 44c # Classes

URI http://purl.obolibrary.org/obo/OlatDv_0000470
Super-classes obo:OlatDv_0000010c
Restrictions obo:RO_0002087op some obo:OlatDv_0000460c

Object Properties ↑

part ofop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000050

preceded_byop # OPs

URI http://purl.obolibrary.org/obo/BFO_0000062

immediately_preceded_byop # OPs

URI http://purl.obolibrary.org/obo/RO_0002087
Super-properties obo:BFO_0000062op

Annotation Properties ↑

definitionap # APs

URI http://purl.obolibrary.org/obo/IAO_0000115

granular_stageap # APs

URI http://purl.obolibrary.org/obo/olatdv#granular_stage
Description

Subset consisting of classes describing highly granular developmental stages (for instance, '23-year-old'). Such stages might be useful for annotation purpose, but might be folded into less granular parents for display purpose.
Super-properties oboInOwl:SubsetPropertyap

subset_propertyap # APs

URI http://www.geneontology.org/formats/oboInOwl#SubsetProperty

default-namespaceap # APs

URI http://www.geneontology.org/formats/oboInOwl#default-namespace

database_cross_referenceap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasDbXref

has_exact_synonymap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasExactSynonym

has_obo_format_versionap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion

has_obo_namespaceap # APs

URI http://www.geneontology.org/formats/oboInOwl#hasOBONamespace

idap # APs

URI http://www.geneontology.org/formats/oboInOwl#id

shorthandap # APs

URI http://www.geneontology.org/formats/oboInOwl#shorthand

commentap # APs

URI http://www.w3.org/2000/01/rdf-schema#comment

labelap # APs

URI http://www.w3.org/2000/01/rdf-schema#label

Namespaces ↑

default (:)
http://purl.obolibrary.org/obo/olatdv.owl
dct
http://purl.org/dc/terms/
obo
http://purl.obolibrary.org/obo/
oboInOwl
http://www.geneontology.org/formats/oboInOwl#
olatdv
http://purl.obolibrary.org/obo/olatdv#
owl
http://www.w3.org/2002/07/owl#
prov
http://www.w3.org/ns/prov#
rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#
rdfs
http://www.w3.org/2000/01/rdf-schema#
sdo
https://schema.org/
skos
http://www.w3.org/2004/02/skos/core#
xsd
http://www.w3.org/2001/XMLSchema#

Legend

cClasses
opObject Properties
fpFunctional Properties
dpData Properties
dpAnnotation Properties
pProperties
niNamed Individuals