OBO Relations Ontology

Genetic variations can span any level of granularity from a full genome or genotype to an individual gene or sequence alteration. These variations can be represented at the physical level (DNA/RNA macromolecules or their parts, as in the ChEBI ontology and Molecular Sequence Ontology) or at the abstract level (generically dependent continuant sequence features that are carried by these macromolecules, as in the Sequence Ontology and Genotype Ontology). The causal relations in this hierarchy can be used in linking either physical or abstract genetic variations to phenotypes or diseases they cause or contribute to. Environmental exposures include those imposed by natural environments, experimentally applied conditions, or clinical interventions.

has super-properties: contributes to severity of condition^op

anabranch of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002378

has super-properties: distributary of^op

attached to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002371

has characteristics : symmetric

has super-properties: connected to^op; attached to part of^op
has sub-properties: has muscle insertion^op, has muscle origin^op

attached to part of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002177

has super-properties: mereotopologically related to^op; biomechanically related to^op
has sub-properties: attached to^op
has domain: c a r o 0000003
has range: c a r o 0000003
has sub-property chains: attached to^op o b f o 0000050^op

axon synapses in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002102

has super-properties: has presynaptic terminal in^op
has domain: c l 0000540
has sub-property chains: axon synapses in^op o b f o 0000050^op

b f o 0000050^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000050

has super-properties: overlaps^op
has sub-properties: active ingredient in^op, bounding layer of^op, branching part of^op, determined by^op, is subsequence of^op, lumen of^op, main stem of^op, occurrent part of^op, skeleton of^op, subcluster of^op

b f o 0000051^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000051

has super-properties: overlaps^op
has sub-properties: composed primarily of^op, has active ingredient^op, has branching part^op, has component^op, has plasma membrane part^op, has skeleton^op, has subsequence^op

biomechanically related to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002567

has super-properties: functionally related to^op
has sub-properties: attached to part of^op, has muscle antagonist^op, has muscle insertion^op, has muscle origin^op
has domain: c a r o 0000003
has range: c a r o 0000003

biotically interacts with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002437

has characteristics : symmetric

has super-properties: ecologically related to^op; interacts with^op
has sub-properties: participates in a abiotic-biotic interaction with^op, participates in a biotic-biotic interaction with^op
has domain: b f o 0000040
has range: b f o 0000040

bounding layer of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002007

A relationship that applies between a continuant and its outer, bounding layer. Examples include the relationship between a multicellular organism and its integument, between an animal cell and its plasma membrane, and between a membrane bound organelle and its outer/bounding membrane.

has super-properties: b f o 0000050^op
has domain: b f o 0000040 and (r o 0000053 some p a t o 0002124)
has range: b f o 0000040

bounds sequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002522

has characteristics : transitive

has super-properties: sequentially related to^op
has sub-properties: has subsequence^op
is inverse of: is bound by sequence of^op

branching part of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002380

has super-properties: b f o 0000050^op; in branching relationship with^op
has range: r o 0000053 some p a t o 0000402
is inverse of: has branching part^op
has sub-property chains: distributary of^op o main stem of^op

capable of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002215

has super-properties: capable of part of^op
has sub-properties: enables^op
has domain: b f o 0000004
has range: b f o 0000015

capable of inhibiting or preventing pathological process^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002599

has super-properties: capable of negatively regulating^op
has sub-properties: is substance that treats^op

capable of negatively regulating^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002597

has super-properties: capable of regulating^op
has sub-properties: capable of inhibiting or preventing pathological process^op
has sub-property chains: capable of^op o negatively regulates^op

capable of part of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002216

has super-properties: functionally related to^op; causal agent in process^op
has sub-properties: capable of^op, contributes to^op
has sub-property chains: capable of^op o b f o 0000050^op

capable of positively regulating^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002598

has super-properties: capable of regulating^op
has sub-properties: capable of upregulating or causing pathological process^op
has sub-property chains: capable of^op o positively regulates^op

capable of regulating^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002596

has super-properties: causal agent in process^op
has sub-properties: capable of negatively regulating^op, capable of positively regulating^op
has sub-property chains: capable of^op o regulates^op

capable of upregulating or causing pathological process^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002600

has super-properties: capable of positively regulating^op

causal agent in process^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002500

has super-properties: causal relation between material entity and a process^op
has sub-properties: acts upstream of or within^op, capable of part of^op, capable of regulating^op, involved in or involved in regulation of^op
is inverse of: process has causal agent^op

causal relation between entities^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002506

has super-properties: causally related to^op
has sub-properties: causally influenced by^op, causally influences^op, determined by part of^op
has domain: b f o 0000002
has range: b f o 0000002

causal relation between material entity and a process^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002595

has super-properties: causally related to^op
has sub-properties: causal agent in process^op, has part structure that is capable of^op
has domain: b f o 0000040
has range: b f o 0000015

causal relation between processes^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002501

has super-properties: causally related to^op
has sub-properties: causally downstream of or within^op, causally upstream of or within^op
has domain: b f o 0000003
has range: b f o 0000003

causal relationship with disease as subject^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004023

has super-properties: causally related to^op; disease relationship^op
has sub-properties: disease causes disruption of^op, disease causes dysfunction of^op, disease has basis in^op
has domain: o g m s 0000031

causally downstream of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002404

has super-properties: b f o 0000062; causally downstream of or within^op
has sub-properties: immediately causally downstream of^op
is inverse of: causally upstream of^op

causally downstream of or within^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002427

has characteristics : transitive

has super-properties: causal relation between processes^op
has sub-properties: causally downstream of^op, regulated by^op
is inverse of: causally upstream of or within^op

causally influenced by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002559

has super-properties: causal relation between entities^op
has sub-properties: determined by^op
is inverse of: causally influences^op

causally influences^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002566

has super-properties: causal relation between entities^op
has sub-properties: determines^op, regulates activity of^op, regulates quantity of^op
has domain: b f o 0000002
has range: b f o 0000002
is inverse of: causally influenced by^op
has sub-property chains: enables^op o causally upstream of^op o has input^op; enables^op o causally upstream of^op o enabled by^op

causally related to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002410

has sub-properties: causal relation between entities^op, causal relation between material entity and a process^op, causal relation between processes^op, causal relationship with disease as subject^op, causes or contributes to condition^op, condition ameliorated by^op, condition exacerbated by^op, condition has genetic basis in^op, is basis for realizable^op, is treated by substance^op, process has causal agent^op, realizable has basis in^op, realized in response to^op, realized in response to stimulus^op, regulates characteristic^op, related via exposure to^op

causally upstream of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002411

has characteristics : transitive

has super-properties: b f o 0000063; causally upstream of or within^op
has sub-properties: causally upstream of, negative effect^op, causally upstream of, positive effect^op, immediately causally upstream of^op, regulates^op, transitively provides input for^op
is inverse of: causally downstream of^op

causally upstream of or within^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002418

has characteristics : transitive

has super-properties: causal relation between processes^op
has sub-properties: causally upstream of^op, causally upstream of or within, negative effect^op, causally upstream of or within, positive effect^op, occurrent part of^op, regulates in other organism^op
is inverse of: causally downstream of or within^op

causally upstream of or within, negative effect^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004046

has super-properties: causally upstream of or within^op
has sub-properties: causally upstream of, negative effect^op

causally upstream of or within, positive effect^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004047

has super-properties: causally upstream of or within^op
has sub-properties: causally upstream of, positive effect^op

causally upstream of, negative effect^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002305

holds between x and y if and only if x is causally upstream of y and the progression of x decreases the frequency, rate or extent of y

has super-properties: causally upstream of^op; causally upstream of or within, negative effect^op
has sub-properties: negatively regulates^op

causally upstream of, positive effect^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002304

holds between x and y if and only if x is causally upstream of y and the progression of x increases the frequency, rate or extent of y

has super-properties: causally upstream of^op; causally upstream of or within, positive effect^op
has sub-properties: positively regulates^op

causes condition^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003303

has super-properties: causes or contributes to condition^op
has sub-properties: is causal germline mutation in^op, is causal somatic mutation in^op

causes or contributes to condition^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003302

has super-properties: causally related to^op
has sub-properties: causes condition^op, contributes to condition^op, has allergic trigger^op, has autoimmune trigger^op, is allergic trigger for^op, is autoimmune trigger for^op

cell expresses^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002009

has super-properties: expresses^op
has domain: c l 0000000

characteristic of part of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002314

has super-properties: depends on^op
has sub-property chains: r o 0000052 o b f o 0000050^op; characteristic of part of^op o b f o 0000050^op

child nucleus of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002476

has super-properties: developmentally preceded by^op
has sub-properties: child nucleus of in hermaphrodite^op, child nucleus of in male^op
has domain: g o 0005634
has range: g o 0005634

child nucleus of in hermaphrodite^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002477

has super-properties: child nucleus of^op

child nucleus of in male^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002478

has super-properties: child nucleus of^op

co-roosts with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002801

has characteristics : symmetric

has super-properties: ecologically co-occurs with^op

coincident with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002008

Example: if we define region of chromosome as any subdivision of a chromosome along its long axis, then we can define a region of chromosome that contains only gene x as 'chromosome region' that coincident_with some 'gene x', where the term gene X corresponds to a genomic sequence.

has super-properties: mereotopologically related to^op
has domain: b f o 0000002 and (r o 0000053 some p a t o 0001199)
has range: b f o 0000002 and (r o 0000053 some p a t o 0001199)

colocalizes with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002325

has super-properties: mereotopologically related to^op
has domain: b f o 0000040
has range: b f o 0000040

commensually interacts with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002441

has super-properties: symbiotically interacts with^op
has sub-property chains: partner in^op o is commensalism^op o

composed primarily of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002473

has super-properties: b f o 0000051^op
has domain: b f o 0000040
has range: b f o 0000040

condition ameliorated by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003310

has super-properties: causally related to^op

condition exacerbated by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003311

has super-properties: causally related to^op

condition has genetic basis in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004000

has super-properties: causally related to^op
has sub-properties: has major susceptibility factor^op, has material basis in gain of function germline mutation in^op, has material basis in germline mutation in^op, has material basis in loss of function germline mutation in^op, has material basis in somatic mutation in^op, has partial material basis in germline mutation in^op
has domain: b f o 0000017
has range: b f o 0000015 or b f o 0000019 or b f o 0000040
is inverse of: is genetic basis for condition^op

conduit for^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002570

has super-properties: overlaps^op
has domain: b f o 0000040
has range: b f o 0000040

confers advantage in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002322

has super-properties: ecologically related to^op
has range: e n v o 01000254

confers susceptibility to condition^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0019501

has super-properties: contributes to condition^op

connected to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002170

has super-properties: mereotopologically related to^op
has sub-properties: attached to^op, connecting branch of^op, distributary of^op, drains^op, electrically_synapsed_to^op, receives input from^op, sends output to^op, supplies^op, tributary of^op
has domain: b f o 0000050^op some system
has range: b f o 0000050^op some system
has sub-property chains: o connects^op

connecting branch of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002252

has super-properties: connected to^op; in branching relationship with^op
is inverse of: has connecting branch^op

connects^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002176

has super-properties: mereotopologically related to^op
has domain: b f o 0000004
has range: b f o 0000050^op some system

contained in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001018

has sub-properties: tracheates^op
has domain: b f o 0000040
has range: b f o 0000004
is inverse of: contains^op
has sub-property chains: r o 0001025 o b f o 0000050^op

contains^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001019

is inverse of: contained in^op

continuous with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002150

has super-properties: mereotopologically related to^op
has domain: b f o 0000004
has range: b f o 0000004

contributes to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002326

has super-properties: capable of part of^op; part of structure that is capable of^op

contributes to condition^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003304

has super-properties: causes or contributes to condition^op
has sub-properties: confers susceptibility to condition^op, contributes to frequency of condition^op, contributes to severity of condition^op, is causal germline mutation partially giving rise to^op

contributes to frequency of condition^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003306

has super-properties: contributes to condition^op

contributes to morphology of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002433

has super-properties: overlaps^op

contributes to severity of condition^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003305

has super-properties: contributes to condition^op
has sub-properties: ameliorates condition^op, exacerbates condition^op

correlated with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002610

has sub-properties: correlated with condition^op, is marker for^op

correlated with condition^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003308

has super-properties: correlated with^op

creates habitat for^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008505

has super-properties: ecologically related to^op
has domain: c a r o 0001010
has range: c a r o 0001010

decreased in magnitude relative to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015008

This relation is used to determine the 'directionality' of relative qualities such as 'decreased strength', relative to the parent type, 'strength'.

has super-properties: different in magnitude relative to^op
has domain: p a t o 0000001
has range: p a t o 0000001

decreases by repression quantity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011007

has super-properties: indirectly negatively regulates quantity of^op
has domain: b f o 0000040
has range: b f o 0000040

dendrite synapsed in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002121

has super-properties: has postsynaptic terminal in^op
has domain: c l 0000540
has sub-property chains: dendrite synapsed in^op o b f o 0000050^op

depends on^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002502

has sub-properties: characteristic of part of^op, towards^op

derived by descent from^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002156

has characteristics : transitive

has super-properties: evolutionarily related to^op
has sub-properties: derived from ancestral fusion of^op
is inverse of: has derived by descendant^op

derived from ancestral fusion of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002374

A has_fused_element B does not imply that A has_part some B: rather than A has_part some B', where B' that has some evolutionary relationship to B.

has super-properties: derived by descent from^op

destabilizes quantity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011014

has super-properties: directly negatively regulates quantity of^op
has domain: b f o 0000040
has range: b f o 0000040

determined by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002507

has super-properties: b f o 0000050^op; determined by part of^op; causally influenced by^op
has domain: system
has range: b f o 0000040
is inverse of: determines^op

determined by part of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002509

has super-properties: overlaps^op; causal relation between entities^op
has sub-properties: determined by^op
has domain: system
has range: b f o 0000040
has sub-property chains: determined by^op o b f o 0000050^op

determines^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002508

has super-properties: causally influences^op
is inverse of: determined by^op

developmentally contributes to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002255

has super-properties: developmentally succeeded by^op; has potential to developmentally contribute to^op
is inverse of: has developmental contribution from^op
has sub-property chains: develops into^op o b f o 0000050^op

developmentally induced by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002256

has super-properties: developmentally preceded by^op
has domain: c a r o 0000003
has range: c a r o 0000003
is inverse of: developmentally induces^op

developmentally induces^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002257

has super-properties: developmentally succeeded by^op; has potential to developmentally induce^op
is inverse of: developmentally induced by^op

developmentally preceded by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002258

This relation groups together various other developmental relations. It is fairly generic, encompassing induction, developmental contribution and direct and transitive develops from

has super-properties: developmentally related to^op
has sub-properties: child nucleus of^op, developmentally induced by^op, developmentally replaces^op, develops from^op, develops in^op, has developmental contribution from^op
has domain: b f o 0000002
has range: b f o 0000002
is inverse of: developmentally succeeded by^op

developmentally related to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002324

has sub-properties: developmentally preceded by^op, has developmental potential involving^op, results in developmental progression of^op

developmentally replaces^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002285

has super-properties: developmentally preceded by^op

developmentally succeeded by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002286

has super-properties: has developmental potential involving^op
has sub-properties: developmentally contributes to^op, developmentally induces^op, develops into^op, part of developmental precursor of^op
is inverse of: developmentally preceded by^op

develops from^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002202

This is the transitive form of the develops from relation

has characteristics : transitive

has super-properties: developmentally preceded by^op
has sub-properties: develops from part of^op, directly develops from^op, transformation of^op
has domain: b f o 0000004
has range: b f o 0000004
is inverse of: develops into^op

develops from part of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002225

has super-properties: develops from^op
has sub-property chains: directly develops from^op o b f o 0000050^op

develops in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002226

has super-properties: developmentally preceded by^op
has domain: c a r o 0000000
has sub-property chains: directly develops from^op o r o 0001025

develops into^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002203

has characteristics : transitive

has super-properties: developmentally succeeded by^op; has potential to develop into^op; has potential to directly develop into^op
has sub-properties: directly develops into^op
is inverse of: develops from^op

different in magnitude relative to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015006

has sub-properties: decreased in magnitude relative to^op, increased in magnitude relative to^op
has domain: p a t o 0000001
has range: p a t o 0000001

differs in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002424

This is an exploratory relation

has sub-properties: differs in attribute^op, differs in attribute of^op

differs in attribute^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002426

has super-properties: differs in^op
has range: b f o 0000020

differs in attribute of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002425

has super-properties: differs in^op
has range: b f o 0000004 or b f o 0000015

directly activates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002406

has super-properties: directly positively regulates^op

directly develops from^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002207

TODO - add child relations from DOS

has super-properties: develops from^op
has sub-properties: immediate transformation of^op
has domain: c a r o 0010000 or c l 0000000
has range: c a r o 0010000 or c l 0000000
is inverse of: directly develops into^op

directly develops into^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002210

has super-properties: develops into^op
is inverse of: directly develops from^op

directly inhibits^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002408

has super-properties: directly negatively regulates^op

directly negatively regulated by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002023

has super-properties: directly regulated by^op
is inverse of: directly negatively regulates^op

directly negatively regulates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002630

has super-properties: negatively regulates^op; directly regulates^op
has sub-properties: directly inhibits^op
is inverse of: directly negatively regulated by^op

directly negatively regulates activity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002449

has super-properties: directly regulates activity of^op
has sub-properties: represses expression of^op
has domain: b f o 0000040
has range: b f o 0000040
has sub-property chains: enables^op o directly negatively regulates^op o enabled by^op

directly negatively regulates quantity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011010

has super-properties: directly regulates quantity of^op
has sub-properties: destabilizes quantity of^op
has domain: b f o 0000040
has range: b f o 0000040

directly positively regulated by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002024

has super-properties: directly regulated by^op
is inverse of: directly positively regulates^op

directly positively regulates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002629

has super-properties: positively regulates^op; directly regulates^op
has sub-properties: directly activates^op
is inverse of: directly positively regulated by^op

directly positively regulates activity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002450

has super-properties: directly regulates activity of^op
has sub-properties: increases expression of^op
has domain: b f o 0000040
has range: b f o 0000040
has sub-property chains: enables^op o directly positively regulates^op o enabled by^op

directly positively regulates quantity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011009

has super-properties: directly regulates quantity of^op
has sub-properties: stabilizes quantity of^op
has domain: b f o 0000040
has range: b f o 0000040

directly provides input for^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002413

has super-properties: immediately causally upstream of^op; transitively provides input for^op
has sub-property chains: obsolete has direct output^op o has direct input^op

directly regulated by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002022

Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2.

has super-properties: regulated by^op
has sub-properties: directly negatively regulated by^op, directly positively regulated by^op
is inverse of: directly regulates^op

directly regulates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002578

has super-properties: regulates^op; immediately causally upstream of^op
has sub-properties: directly negatively regulates^op, directly positively regulates^op
is inverse of: directly regulated by^op

directly regulates activity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002448

has super-properties: molecularly interacts with^op; regulates activity of^op
has sub-properties: directly negatively regulates activity of^op, directly positively regulates activity of^op
has domain: b f o 0000040
has range: b f o 0000040
has sub-property chains: enables^op o regulates^op o enabled by^op

directly regulates quantity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011021

has super-properties: regulates quantity of^op
has sub-properties: directly negatively regulates quantity of^op, directly positively regulates quantity of^op

disease arises from alteration in structure^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004030

has super-properties: disease has basis in^op
has range: c a r o 0000003

disease causes disruption of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004024

has super-properties: causal relationship with disease as subject^op
has domain: o g m s 0000031
has range: b f o 0000015
has sub-property chains: disease causes disruption of^op o b f o 0000050^op; disease causes dysfunction of^op o capable of^op

disease causes dysfunction of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004025

has super-properties: causal relationship with disease as subject^op
has domain: o g m s 0000031
has range: c a r o 0000006
has sub-property chains: disease causes dysfunction of^op o b f o 0000050^op

disease has basis in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004019

has super-properties: realizable has basis in^op; causal relationship with disease as subject^op
has sub-properties: disease arises from alteration in structure^op, disease has basis in disruption of^op, disease has basis in dysfunction of^op, disease has basis in feature^op, disease has infectious agent^op
has domain: o g m s 0000031

disease has basis in disruption of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004021

has super-properties: disease has basis in^op
has range: b f o 0000015

disease has basis in dysfunction of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004020

has super-properties: disease has basis in^op
has range: c a r o 0000006

disease has basis in feature^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004022

has super-properties: has phenotype^op; disease has basis in^op
has domain: o g m s 0000031
has range: o g m s 0000031 or u p h e n o 0001001

disease has feature^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004029

has super-properties: disease relationship^op
has domain: o g m s 0000031
has range: o g m s 0000031 or u p h e n o 0001001

disease has infectious agent^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0014001

has super-properties: disease has basis in^op

disease has inflammation site^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004027

has super-properties: disease has location^op
has domain: o g m s 0000031
has range: b f o 0000004; c a r o 0000006 or c a r o 0000007

disease has location^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004026

has super-properties: disease relationship^op
has sub-properties: disease has inflammation site^op
has domain: o g m s 0000031
has range: b f o 0000004; c a r o 0000006 or c a r o 0000007

disease relationship^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0040035

has sub-properties: causal relationship with disease as subject^op, disease has feature^op, disease has location^op

distributary of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002377

This is both a mereotopological relationship and a relationship defined in connection to processes. It concerns both the connecting structure, and how this structure is disposed to causally affect flow processes

has super-properties: connected to^op; in branching relationship with^op
has sub-properties: anabranch of^op, proper distributary of^op

does not overlap sequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002527

has characteristics : symmetric

has super-properties: sequentially related to^op
has sub-properties: is downstream of sequence of^op, is upstream of sequence of^op, sequentially adjacent to^op

drains^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002179

has super-properties: connected to^op

eats^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002470

has super-properties: trophically interacts with^op

ecologically co-occurs with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008506

has characteristics : symmetric

has super-properties: ecologically related to^op
has sub-properties: co-roosts with^op
has domain: c a r o 0001010
has range: c a r o 0001010

ecologically related to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002321

has sub-properties: biotically interacts with^op, confers advantage in^op, creates habitat for^op, ecologically co-occurs with^op, has habitat^op, transmitted by^op

ectoparasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002632

has super-properties: parasite of^op
is inverse of: has ectoparasite^op

electrically_synapsed_to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002003

has super-properties: connected to^op

enabled by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002333

has super-properties: r o 0000057; functionally related to^op
is inverse of: enables^op

enables^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002327

has super-properties: capable of^op
is inverse of: enabled by^op
has sub-property chains: enables^op o b f o 0000051^op; enables^op o has component activity^op

enables subfunction^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004031

has super-properties: functionally related to^op
has sub-property chains: enables^op o b f o 0000051^op

encompasses^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002085

Previously had ID http://purl.obolibrary.org/obo/RO_0002124 in test files in sandpit - but this seems to have been dropped from ro-edit.owl at some point. No re-use under this ID AFAIK, but leaving note here in case we run in to clashes down the line. Official ID now chosen from DOS ID range.

has characteristics : transitive

has super-properties: r o 0002088
is inverse of: r o 0002092

endoparasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002634

has super-properties: parasite of^op
has sub-properties: intercellular endoparasite of^op, intracellular endoparasite of^op
is inverse of: has endoparasite^op

epiphyte of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008501

has super-properties: symbiotically interacts with^op
is inverse of: has epiphyte^op

evolutionarily related to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002320

has sub-properties: derived by descent from^op, evolutionary variant of^op, has derived by descendant^op, in taxon^op, serially homologous to^op, shares ancestor with^op

evolutionary variant of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002312

has super-properties: evolutionarily related to^op

exacerbates condition^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003309

has super-properties: contributes to severity of condition^op

exemplar data of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015002

has super-properties: top object property
is inverse of: has exemplar data^op

existence ends at start of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002593

has super-properties: existence ends during or before^op

existence ends during^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002492

The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription.

has super-properties: existence overlaps^op; existence ends during or before^op
has sub-properties: existence ends with^op, existence starts and ends during^op
has sub-property chains: existence ends during^op o b f o 0000050^op; existence ends at start of^op o b f o 0000050^op

existence ends during or before^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002497

has super-properties: relation between physical entity and a process or stage^op
has sub-properties: existence ends at start of^op, existence ends during^op
has sub-property chains: b f o 0000050^op o existence ends during or before^op; developmentally succeeded by^op o existence ends during or before^op; existence ends during or before^op o b f o 0000050^op; existence ends during or before^op o b f o 0000063; existence ends during or before^op o r o 0002082; existence ends at start of^op o b f o 0000063 o

existence ends with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002493

has super-properties: existence ends during^op

existence overlaps^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002490

has super-properties: relation between physical entity and a process or stage^op
has sub-properties: existence ends during^op, existence starts during^op

existence starts and ends during^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002491

has super-properties: existence starts during^op; existence ends during^op

existence starts at end of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002583

has super-properties: existence starts during or after^op

existence starts during^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002488

has super-properties: existence overlaps^op; existence starts during or after^op
has sub-properties: existence starts and ends during^op, existence starts with^op
has sub-property chains: existence starts during^op o b f o 0000050^op; existence starts at end of^op o b f o 0000050^op

existence starts during or after^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002496

has super-properties: relation between physical entity and a process or stage^op
has sub-properties: existence starts at end of^op, existence starts during^op
has sub-property chains: b f o 0000050^op o existence starts during or after^op; developmentally preceded by^op o existence starts during or after^op; existence starts during or after^op o b f o 0000050^op; existence starts during or after^op o b f o 0000062; existence starts during or after^op o r o 0002082; existence starts at end of^op o b f o 0000062 o

existence starts with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002489

has super-properties: existence starts during^op

exports^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002345

has super-properties: transports^op

expressed in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002206

has super-properties: genomically related to^op
has sub-properties: over-expressed in^op, ubiquitously expressed in^op, under-expressed in^op
has domain: b f o 0000002; b f o 0000031 or b f o 0000040
has range: c a r o 0000006
is inverse of: expresses^op
has sub-property chains: expressed in^op o b f o 0000050^op

expresses^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002292

has super-properties: genomically related to^op
has sub-properties: cell expresses^op, ubiquitously expresses^op
is inverse of: expressed in^op

facultative parasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002228

has super-properties: parasite of^op

fasciculates with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002101

has super-properties: overlaps^op
has domain: c l 0000540
has range: c a r o 0001001
is inverse of: has fasciculating neuron projection^op

formed as result of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002354

has super-properties: output of^op
is inverse of: results in formation of^op

functionally related to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002328

has sub-properties: biomechanically related to^op, capable of part of^op, enabled by^op, enables subfunction^op, has part structure that is capable of^op, input of^op, involved in or involved in regulation of^op, is active in^op, output of^op, part of structure that is capable of^op, regulates levels of^op

gene product of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002204

has super-properties: genomically related to^op
has domain: b f o 0000004; b f o 0000031 or b f o 0000040
has range: b f o 0000002; b f o 0000031 or b f o 0000040
is inverse of: has gene product^op
has sub-property chains: ribosomal translation of^op o transcribed from^op

generically depends on^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0010001

has domain: b f o 0000031
has range: b f o 0000004
is inverse of: is carrier of^op
has sub-property chains: r o 0000052 o r o 0000058

genetically interacts with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002435

has characteristics : symmetric

has super-properties: interacts with^op

genomically related to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002330

has sub-properties: expressed in^op, expresses^op, gene product of^op, has gene product^op, ribosomal translation of^op, ribosomally translates to^op, transcribed from^op, transcribed to^op
has domain: b f o 0000002
has range: b f o 0000002

has active ingredient^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002248

has super-properties: b f o 0000051^op
has domain: b f o 0000040
has range: b f o 0000040
is inverse of: active ingredient in^op

has allergic trigger^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001022

has super-properties: causes or contributes to condition^op
has range: b f o 0000040
is inverse of: is allergic trigger for^op

has autoimmune trigger^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001023

has super-properties: causes or contributes to condition^op
has range: b f o 0000040
is inverse of: is autoimmune trigger for^op

has branching part^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002569

has super-properties: b f o 0000051^op; in branching relationship with^op
is inverse of: branching part of^op

has characterizing marker set^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015004

Contributors :: https://orcid.org/0000-0001-7258-9596

has domain: c l 0000000

has component^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002180

has super-properties: b f o 0000051^op
has sub-properties: has component process^op

has component activity^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002017

A 'has component activity' B if A is A and B are molecular functions (GO_0003674) and A has_component B.

has super-properties: has component process^op
has sub-properties: has effector activity^op, has necessary component activity^op, has regulatory component activity^op

has component participant^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002238

has super-properties: r o 0000057

has component process^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002018

has super-properties: has component^op
has sub-properties: has component activity^op
has domain: b f o 0000015
has range: b f o 0000015

has connecting branch^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002253

has super-properties: in branching relationship with^op
is inverse of: connecting branch of^op

has consumer^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009004

has domain: b f o 0000040
has range: c a r o 0001010

has cross section^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015011

Example: a spherical object has the quality of being spherical, and the spherical quality has_cross_section round.

has dendrite location^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002360

has super-properties: overlaps^op
has sub-properties: has sensory dendrite in^op

has derived by descendant^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002157

has characteristics : transitive

has super-properties: evolutionarily related to^op
is inverse of: derived by descent from^op

has developmental contribution from^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002254

has super-properties: developmentally preceded by^op
has domain: c a r o 0000000
has range: c a r o 0000000
is inverse of: developmentally contributes to^op
has sub-property chains: b f o 0000051^op o develops from^op

has developmental potential involving^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002384

has super-properties: developmentally related to^op
has sub-properties: developmentally succeeded by^op, has potential to develop into^op, has potential to developmentally contribute to^op, has potential to developmentally induce^op
has domain: c a r o 0000000
has range: c a r o 0000000

has direct input^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002400

has super-properties: has input^op
has sub-property chains: r o 0002224 o has direct input^op

has disease^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0016002

Date :: 05T17:30:44Z/11/2021

Contributors :: http://orcid.org/0000-0002-7463-6306

has super-properties: has phenotype or disease^op

has disease driver^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0007001

has super-properties: has driver^op

has driver^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0007000

has sub-properties: has disease driver^op

has ectoparasite^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002633

has super-properties: parasitized by^op
is inverse of: ectoparasite of^op

has effector activity^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002025

This relation is designed for constructing compound molecular functions, typically in combination with one or more regulatory component activity relations.

has characteristics : functional

has super-properties: has component activity^op

has eggs laid in by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002625

has super-properties: parasitized by^op; visited by^op
is inverse of: lays eggs in^op

has eggs laid on by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008508

has super-properties: visited by^op
is inverse of: lays eggs on^op

has end location^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002232

has super-properties: has part that occurs in^op
has domain: b f o 0000015
has range: b f o 0000004
has sub-property chains: r o 0002230 o b f o 0000066

has end sequence^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002518

has characteristics : transitive

has super-properties: has subsequence^op
is inverse of: is end sequence of^op

has endoparasite^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002635

has super-properties: parasitized by^op
has sub-properties: has intercellular endoparasite^op, has intracellular endoparasite^op
is inverse of: endoparasite of^op

has epiphyte^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008502

has super-properties: symbiotically interacts with^op
is inverse of: epiphyte of^op

has evidence^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002558

x has evidence y iff , x is an information content entity, material entity or process, and y supports either the existence of x, or the truth value of x.

has super-properties: related via evidence or inference to^op
is inverse of: is evidence for^op

has exemplar data^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015001

has super-properties: top object property
is inverse of: exemplar data of^op
has sub-property chains: has exemplar data^op o subcluster of^op

has exposure medium^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0016004

Date :: 14T20:41:45Z/12/2021

has super-properties: related via exposure to^op

has exposure receptor^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002240

has super-properties: related via exposure to^op

has exposure route^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002242

has super-properties: related via exposure to^op

has exposure stimulus^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002309

has super-properties: related via exposure to^op
has sub-properties: has exposure stressor^op

has exposure stressor^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002241

has super-properties: has exposure stimulus^op

has exposure transport path^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002243

has super-properties: related via exposure to^op

has fasciculating neuron projection^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002132

has super-properties: overlaps^op
has domain: c a r o 0001001
has range: c l 0000540 or (b f o 0000050^op some c l 0000540)
is inverse of: fasciculates with^op

has flowers visited by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002623

has super-properties: visited by^op
is inverse of: visits flowers of^op

has gene product^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002205

has super-properties: genomically related to^op
has domain: b f o 0000002
has range: b f o 0000004
is inverse of: gene product of^op
has sub-property chains: transcribed to^op o ribosomally translates to^op

has habitat^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002303

A population of xs will possess adaptations (either evolved naturally or via artifical selection) which permit it to exist and grow in y.

has super-properties: ecologically related to^op
has domain: c a r o 0001010
has range: e n v o 01000254

has high plasma membrane amount^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015015

has super-properties: has plasma membrane part^op
has domain: c l 0000000

has host^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002454

has super-properties: symbiotically interacts with^op
has sub-properties: hyperparasite of^op, parasite of^op, pathogen of^op

has input^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002233

has super-properties: r o 0000057
has sub-properties: has direct input^op, has ligand^op, has primary input^op, results in breakdown of^op, results in remodeling of^op
has domain: b f o 0000015
is inverse of: input of^op
has sub-property chains: r o 0002224 o has input^op

has intercellular endoparasite^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002639

has super-properties: has endoparasite^op
is inverse of: intercellular endoparasite of^op

has intermediate^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002505

has super-properties: r o 0000057

has intracellular endoparasite^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002641

has super-properties: has endoparasite^op
is inverse of: intracellular endoparasite of^op

has ligand^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002019

has super-properties: has input^op

has low plasma membrane amount^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015016

has super-properties: has plasma membrane part^op
has domain: c l 0000000

has major susceptibility factor^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004005

has super-properties: condition has genetic basis in^op
is inverse of: is causal susceptibility factor for^op

has material basis in gain of function germline mutation in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004001

has super-properties: condition has genetic basis in^op
is inverse of: is causal gain of function germline mutation of in^op

has material basis in germline mutation in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004003

has super-properties: condition has genetic basis in^op
is inverse of: is causal germline mutation in^op

has material basis in loss of function germline mutation in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004002

has super-properties: condition has genetic basis in^op
is inverse of: is causal loss of function germline mutation of in^op

has material basis in somatic mutation in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004004

has super-properties: condition has genetic basis in^op
is inverse of: is causal somatic mutation in^op

has mesoparasite^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002637

has super-properties: parasitized by^op
is inverse of: mesoparasite of^op

has model^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002615

is inverse of: has role in modeling^op

has modifier^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002573

has domain: b f o 0000020
has range: b f o 0000020

has muscle antagonist^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002568

has super-properties: biomechanically related to^op

has muscle insertion^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002373

has super-properties: attached to^op; biomechanically related to^op
has domain: c a r o 0000003

has muscle origin^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002372

has super-properties: attached to^op; biomechanically related to^op
has domain: c a r o 0000003

has necessary component activity^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002016

A has necessary component activity B if A and B are GO molecular functions (GO_0003674), A has_component B and B is necessary for A. For example, ATPase coupled transporter activity has necessary component ATPase activity; transcript factor activity has necessary component DNA binding activity.

has super-properties: has component activity^op; positively regulated by^op

has negative regulatory component activity^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002014

By convention GO molecular functions are classified by their effector function. Internal regulatory functions are treated as components. For example, NMDA glutmate receptor activity is a cation channel activity with positive regulatory component 'glutamate binding' and negative regulatory components including 'zinc binding' and 'magnesium binding'.

has super-properties: has regulatory component activity^op; negatively regulated by^op

has output^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002234

has super-properties: r o 0000057
has sub-properties: has primary output^op, results in formation of^op
is inverse of: output of^op
has sub-property chains: r o 0002230 o has output^op

has parasitoid^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002209

has super-properties: parasitized by^op
is inverse of: parasitoid of^op

has part structure that is capable of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002584

has super-properties: functionally related to^op; causal relation between material entity and a process^op
has sub-property chains: b f o 0000051^op o capable of^op

has part that occurs in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002479

has sub-properties: has end location^op, has start location^op, occurs across^op
has domain: b f o 0000003
has range: b f o 0000004
has sub-property chains: b f o 0000051^op o b f o 0000066

has partial material basis in germline mutation in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004006

has super-properties: condition has genetic basis in^op
is inverse of: is causal germline mutation partially giving rise to^op

has pathogen^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002557

has super-properties: host of^op
is inverse of: pathogen of^op

has phenotype^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002200

has super-properties: has phenotype or disease^op
has sub-properties: disease has basis in feature^op, has symptom^op
has domain: b f o 0000031 or c a r o 0000006 or o g m s 0000031
has range: u p h e n o 0001001
is inverse of: phenotype of^op

has phenotype or disease^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0016001

Date :: 05T17:30:14Z/11/2021

Contributors :: http://orcid.org/0000-0002-7463-6306

has sub-properties: has disease^op, has phenotype^op

has plasma membrane part^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002104

has super-properties: b f o 0000051^op
has sub-properties: has high plasma membrane amount^op, has low plasma membrane amount^op
has domain: c a r o 0000006
has range: c a r o 0000006

has positive regulatory component activity^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002015

By convention GO molecular functions are classified by their effector function and internal regulatory functions are treated as components. So, for example calmodulin has a protein binding activity that has positive regulatory component activity calcium binding activity. Receptor tyrosine kinase activity is a tyrosine kinase activity that has positive regulatory component 'ligand binding'.

has super-properties: has regulatory component activity^op; positively regulated by^op

has postsynaptic terminal in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002110

has super-properties: has synaptic terminal in^op
has sub-properties: dendrite synapsed in^op, receives synaptic input in region^op
has domain: c l 0000540
is inverse of: has presynaptic terminal in^op
has sub-property chains: has postsynaptic terminal in^op o b f o 0000050^op

has potential to develop into^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002387

has super-properties: has developmental potential involving^op
has sub-properties: develops into^op, has potential to directly develop into^op

has potential to developmentally contribute to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002385

has super-properties: has developmental potential involving^op
has sub-properties: developmentally contributes to^op

has potential to developmentally induce^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002386

has super-properties: has developmental potential involving^op
has sub-properties: developmentally induces^op

has potential to directly develop into^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002388

has super-properties: has potential to develop into^op
has sub-properties: develops into^op

has presynaptic terminal in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002113

has super-properties: has synaptic terminal in^op
has sub-properties: axon synapses in^op, sends synaptic output to region^op
has domain: c l 0000540
is inverse of: has postsynaptic terminal in^op
has sub-property chains: has presynaptic terminal in^op o b f o 0000050^op

has primary input^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004009

has super-properties: has input^op; has primary input or output^op

has primary input or output^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004007

has super-properties: r o 0000057
has sub-properties: has primary input^op, has primary output^op

has primary output^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004008

has super-properties: has output^op; has primary input or output^op

has primary substance added^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009005

has characteristics : irreflexive

has super-properties: has substance added^op

has prototype^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002214

has domain: b f o 0000004 or b f o 0000015

has regulatory component activity^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002013

has super-properties: has component activity^op; regulated by^op
has sub-properties: has negative regulatory component activity^op, has positive regulatory component activity^op

has relative magnitude^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015010

has role in modeling^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003301

The primary use case for this relation was to link a biological model system such as a cell line or model organism to a disease it is used to investigate, in virtue of the model system exhibiting features similar to that of the disease of interest. But the relation is defined more broadly to support other use cases, such as linking genes in which alterations are made to create model systems to the condition the system is used to interrogate, or computational models to real-world phenomena they are defined to simulate.

has characteristics : asymmetric, irreflexive

is inverse of: has model^op

has sensory dendrite in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013007

has super-properties: has dendrite location^op
has domain: c l 0000101^c
has sub-property chains: has sensory dendrite in^op o b f o 0000050^op

has skeleton^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002551

has characteristics : asymmetric, irreflexive

has super-properties: b f o 0000051^op
has domain: c a r o 0000003
has range: c a r o 0000006
is inverse of: skeleton of^op

has small molecule activator^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012001

has super-properties: has small molecule regulator^op

has small molecule inhibitor^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012002

has super-properties: has small molecule regulator^op

has small molecule regulator^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012000

has super-properties: r o 0000057
has sub-properties: has small molecule activator^op, has small molecule inhibitor^op

has soma location^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002100

has super-properties: overlaps^op
has domain: c l 0000540
has range: c a r o 0000003
has sub-property chains: has soma location^op o b f o 0000050^op

has start location^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002231

has super-properties: has part that occurs in^op
has domain: b f o 0000015
has range: b f o 0000004
has sub-property chains: r o 0002224 o b f o 0000066

has start sequence^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002516

has characteristics : transitive

has super-properties: has subsequence^op
is inverse of: is start sequence of^op

has subsequence^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002524

has characteristics : transitive

has super-properties: b f o 0000051^op; bounds sequence of^op; overlaps sequence of^op
has sub-properties: has end sequence^op, has start sequence^op, is consecutive sequence of^op
is inverse of: is subsequence of^op

has substance added^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009001

has characteristics : irreflexive

has sub-properties: has primary substance added^op
has domain: b f o 0000040
has range: b f o 0000040

has substance removed^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009002

has characteristics : irreflexive

has domain: b f o 0000040
has range: b f o 0000040

has symptom^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002452

has super-properties: has phenotype^op
has domain: o g m s 0000031

has synaptic IO in region^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013001

has super-properties: has synaptic terminal in^op
has sub-properties: has synaptic IO throughout^op, receives synaptic input in region^op, sends synaptic output to region^op
has sub-property chains: has synaptic IO in region^op o b f o 0000050^op

has synaptic IO throughout^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013004

has super-properties: has synaptic IO in region^op
has sub-properties: receives synaptic input throughout^op, sends synaptic output throughout^op

has synaptic terminal in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002130

has super-properties: overlaps^op
has sub-properties: has postsynaptic terminal in^op, has presynaptic terminal in^op, has synaptic IO in region^op
has domain: c l 0000540
is inverse of: has synaptic terminal of^op
has sub-property chains: has synaptic terminal in^op o b f o 0000050^op

has synaptic terminal of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002006

has super-properties: overlaps^op
is inverse of: has synaptic terminal in^op

has target end location^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002339

has super-properties: results in transport to from or in^op
has sub-property chains: has target end location^op o b f o 0000050^op

has target start location^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002338

has super-properties: results in transport to from or in^op
has sub-property chains: has target start location^op o b f o 0000050^op

has vector^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002460

has super-properties: participates in a biotic-biotic interaction with^op
is inverse of: is vector for^op

helper property (not for use in curation)^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002464

has sub-properties: interaction relation helper property^op

hemiparasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002237

has super-properties: parasite of^op

host of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002453

has super-properties: symbiotically interacts with^op
has sub-properties: has pathogen^op, hyperparasitized by^op, parasitized by^op

hyperparasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002553

has super-properties: has host^op
is inverse of: hyperparasitized by^op
has sub-property chains: parasite of^op o parasite of^op

hyperparasitized by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002554

has super-properties: host of^op
is inverse of: hyperparasite of^op
has sub-property chains: parasitized by^op o parasitized by^op

immediate transformation of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002495

has super-properties: directly develops from^op; transformation of^op

immediately causally downstream of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002405

has super-properties: r o 0002087; causally downstream of^op
is inverse of: immediately causally upstream of^op

immediately causally upstream of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002412

has super-properties: r o 0002090; causally upstream of^op
has sub-properties: directly provides input for^op, directly regulates^op
is inverse of: immediately causally downstream of^op

immersed in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009003

has characteristics : irreflexive

has domain: b f o 0000040
has range: b f o 0000040

imports^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002340

has super-properties: transports^op

in branching relationship with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002375

has super-properties: mereotopologically related to^op
has sub-properties: branching part of^op, connecting branch of^op, distributary of^op, has branching part^op, has connecting branch^op, main stem of^op, tributary of^op
has domain: b f o 0000040
has range: b f o 0000040

in register with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002026

has super-properties: mereotopologically related to^op
has domain: image^c
has range: image^c

in taxon^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002162

Connects a biological entity to its taxon of origin.

has super-properties: evolutionarily related to^op
has sub-properties: only in taxon^op
has range: c a r o 0001010
has sub-property chains: b f o 0000050^op o in taxon^op; b f o 0000051^op o in taxon^op; develops from^op o in taxon^op; expressed in^op o in taxon^op; has prototype^op o in taxon^op; capable of^op o in taxon^op; develops from part of^op o in taxon^op; has developmental contribution from^op o in taxon^op; results in developmental progression of^op o in taxon^op

increased in magnitude relative to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015007

This relation is used to determine the 'directionality' of relative qualities such as 'increased strength', relative to the parent type, 'strength'.

has super-properties: different in magnitude relative to^op
has domain: p a t o 0000001
has range: p a t o 0000001

increases by expression quantity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011008

has super-properties: indirectly positively regulates quantity of^op
has domain: b f o 0000040
has range: b f o 0000040

increases expression of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003003

has super-properties: directly positively regulates activity of^op
has domain: b f o 0000040
has range: b f o 0000040

indirectly activates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002407

has characteristics : transitive

has super-properties: positively regulates^op
has sub-property chains: directly activates^op o directly activates^op; directly activates^op o indirectly activates^op; indirectly activates^op o directly activates^op; indirectly inhibits^op o indirectly inhibits^op

indirectly inhibits^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002409

has characteristics : transitive

has super-properties: negatively regulates^op
has sub-property chains: directly inhibits^op o directly inhibits^op; directly inhibits^op o indirectly inhibits^op; indirectly inhibits^op o directly inhibits^op

indirectly negatively regulates activity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011016

has super-properties: indirectly regulates activity of^op

indirectly negatively regulates quantity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011023

has super-properties: indirectly regulates quantity of^op
has sub-properties: decreases by repression quantity of^op

indirectly positively regulates activity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011013

has super-properties: indirectly regulates activity of^op
has domain: b f o 0000040
has range: b f o 0000040

indirectly positively regulates quantity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011024

has super-properties: indirectly regulates quantity of^op
has sub-properties: increases by expression quantity of^op

indirectly regulates activity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011004

has super-properties: regulates activity of^op
has sub-properties: indirectly negatively regulates activity of^op, indirectly positively regulates activity of^op
has domain: b f o 0000040
has range: b f o 0000040

indirectly regulates quantity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011022

has super-properties: regulates quantity of^op
has sub-properties: indirectly negatively regulates quantity of^op, indirectly positively regulates quantity of^op

innervated_by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002005

has domain: c a r o 0000003
has range: c a r o 0001001
is inverse of: innervates^op

innervates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002134

has domain: c a r o 0001001
is inverse of: innervated_by^op
has sub-property chains: innervates^op o b f o 0000050^op

input of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002352

has super-properties: r o 0000056; functionally related to^op
is inverse of: has input^op

interaction relation helper property^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002563

has super-properties: helper property (not for use in curation)^op
has sub-properties: is symbiosis^op, molecular interaction relation helper property^op

interacts with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002434

has characteristics : symmetric

has sub-properties: biotically interacts with^op, genetically interacts with^op, molecularly interacts with^op
has domain: b f o 0000040
has range: b f o 0000040

interacts with via parasite-host interaction^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002443

has super-properties: symbiotically interacts with^op
has sub-properties: parasite of^op, parasitized by^op
has sub-property chains: partner in^op o is parasitism^op o

intercellular endoparasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002638

has super-properties: endoparasite of^op
is inverse of: has intercellular endoparasite^op

intracellular endoparasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002640

has super-properties: endoparasite of^op
is inverse of: has intracellular endoparasite^op

involved in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002331

has super-properties: r o 0000056; involved in or involved in regulation of^op
has sub-property chains: enables^op o b f o 0000050^op; involved in^op o b f o 0000050^op

involved in negative regulation of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002430

has super-properties: involved in regulation of^op
has sub-property chains: enables^op o negatively regulates^op; involved in^op o negatively regulates^op

involved in or involved in regulation of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002431

has super-properties: acts upstream of or within^op; functionally related to^op; causal agent in process^op
has sub-properties: involved in^op, involved in regulation of^op

involved in positive regulation of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002429

has super-properties: involved in regulation of^op
has sub-property chains: enables^op o positively regulates^op; involved in^op o positively regulates^op

involved in regulation of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002428

has super-properties: acts upstream of^op; involved in or involved in regulation of^op
has sub-properties: involved in negative regulation of^op, involved in positive regulation of^op
has sub-property chains: enables^op o regulates^op; involved in^op o regulates^op

is active in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002432

has super-properties: overlaps^op; functionally related to^op
has sub-property chains: enables^op o b f o 0000066

is allergic trigger for^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001020

has super-properties: causes or contributes to condition^op
has domain: b f o 0000040
is inverse of: has allergic trigger^op

is autoimmune trigger for^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001021

has super-properties: causes or contributes to condition^op
has domain: b f o 0000040
is inverse of: has autoimmune trigger^op

is basis for realizable^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004018

has super-properties: causally related to^op
has sub-properties: is genetic basis for condition^op
is inverse of: realizable has basis in^op

is bound by sequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002523

has characteristics : transitive

has super-properties: sequentially related to^op
has sub-properties: is subsequence of^op
is inverse of: bounds sequence of^op

is carrier of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0010002

has domain: b f o 0000004
has range: b f o 0000031
is inverse of: generically depends on^op
has sub-property chains: r o 0000059 o r o 0000053

is causal gain of function germline mutation of in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004011

has super-properties: is genetic basis for condition^op
is inverse of: has material basis in gain of function germline mutation in^op

is causal germline mutation in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004013

has super-properties: causes condition^op; is genetic basis for condition^op
is inverse of: has material basis in germline mutation in^op

is causal germline mutation partially giving rise to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004016

has super-properties: contributes to condition^op; is genetic basis for condition^op
is inverse of: has partial material basis in germline mutation in^op

is causal loss of function germline mutation of in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004012

has super-properties: is genetic basis for condition^op
is inverse of: has material basis in loss of function germline mutation in^op

is causal somatic mutation in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004014

has super-properties: causes condition^op; is genetic basis for condition^op
is inverse of: has material basis in somatic mutation in^op

is causal susceptibility factor for^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004015

has super-properties: is genetic basis for condition^op
is inverse of: has major susceptibility factor^op

is commensalism^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002466

has super-properties: is symbiosis^op

is consecutive sequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002520

has super-properties: has subsequence^op

is downstream of sequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002529

has characteristics : transitive

has super-properties: does not overlap sequence of^op
has sub-properties: is immediately downstream of sequence of^op
is inverse of: is downstream of sequence of^op, is downstream of sequence of^op

is eaten by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002471

has super-properties: trophically interacts with^op

is end sequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002519

has characteristics : transitive

has super-properties: is subsequence of^op
is inverse of: has end sequence^op

is evidence for^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002472

has super-properties: related via evidence or inference to^op
is inverse of: has evidence^op

is evidence with support from^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002614

In the Gene Ontology association model, this corresponds to the With/From field

has super-properties: related via evidence or inference to^op

is genetic basis for condition^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004010

has super-properties: is basis for realizable^op
has sub-properties: is causal gain of function germline mutation of in^op, is causal germline mutation in^op, is causal germline mutation partially giving rise to^op, is causal loss of function germline mutation of in^op, is causal somatic mutation in^op, is causal susceptibility factor for^op
has range: b f o 0000017
is inverse of: condition has genetic basis in^op

is immediately downstream of sequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002530

has super-properties: sequentially adjacent to^op; is downstream of sequence of^op

is immediately upstream of sequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002531

has super-properties: sequentially adjacent to^op; is upstream of sequence of^op

is killed by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002627

has super-properties: participates in a biotic-biotic interaction with^op
is inverse of: kills^op

is kinase activity^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002481

has super-properties: molecular interaction relation helper property^op

is marker for^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002607

has super-properties: correlated with^op

is mutualism^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002467

has super-properties: is symbiosis^op

is myristoyltransferase activity^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018001

has super-properties: molecular interaction relation helper property^op

is parasitism^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002468

has super-properties: is symbiosis^op

is sequentially aligned with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002521

has characteristics : symmetric

has super-properties: sequentially related to^op

is small molecule activator^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012005

has super-properties: is small molecule regulator^op

is small molecule inhibitor^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012006

has super-properties: is small molecule regulator^op

is small molecule regulator^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012004

has super-properties: r o 0000057
has sub-properties: is small molecule activator^op, is small molecule inhibitor^op

is start sequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002517

has characteristics : transitive

has super-properties: is subsequence of^op
is inverse of: has start sequence^op

is subsequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002525

has characteristics : transitive

has super-properties: b f o 0000050^op; is bound by sequence of^op; overlaps sequence of^op
has sub-properties: is end sequence of^op, is start sequence of^op
is inverse of: has subsequence^op

is substance that treats^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002606

has super-properties: capable of inhibiting or preventing pathological process^op
is inverse of: is treated by substance^op

is symbiosis^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002465

has super-properties: interaction relation helper property^op
has sub-properties: is commensalism^op, is mutualism^op, is parasitism^op

is treated by substance^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002302

has super-properties: causally related to^op
is inverse of: is substance that treats^op

is ubiquitination^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002482

has super-properties: molecular interaction relation helper property^op

is upstream of sequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002528

has characteristics : transitive

has super-properties: does not overlap sequence of^op
has sub-properties: is immediately upstream of sequence of^op

is vector for^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002459

has super-properties: participates in a biotic-biotic interaction with^op
is inverse of: has vector^op

kills^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002626

has super-properties: participates in a biotic-biotic interaction with^op
is inverse of: is killed by^op

kleptoparasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008503

has super-properties: parasite of^op
is inverse of: kleptoparasitized by^op

kleptoparasitized by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008504

has super-properties: parasitized by^op
is inverse of: kleptoparasite of^op

lays eggs in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002624

has super-properties: parasite of^op; visits^op
is inverse of: has eggs laid in by^op

lays eggs on^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008507

has super-properties: visits^op
is inverse of: has eggs laid on by^op

lumen of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002571

has super-properties: b f o 0000050^op
has sub-properties: luminal space of^op
has range: b f o 0000040

luminal space of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002572

has super-properties: lumen of^op
has domain: b f o 0000141

main stem of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002381

has super-properties: b f o 0000050^op; in branching relationship with^op

mereotopologically related to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002323

has sub-properties: attached to part of^op, coincident with^op, colocalizes with^op, connected to^op, connects^op, continuous with^op, in branching relationship with^op, in register with^op, overlaps^op, spatially disjoint from^op

mesoparasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002636

has super-properties: parasite of^op
is inverse of: has mesoparasite^op

molecular interaction relation helper property^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002564

has super-properties: interaction relation helper property^op
has sub-properties: is kinase activity^op, is myristoyltransferase activity^op, is ubiquitination^op

molecularly interacts with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002436

has characteristics : symmetric

has super-properties: interacts with^op
has sub-properties: directly regulates activity of^op, myristoylates^op, phosphorylates^op, ubiquitinates^op

mutualistically interacts with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002442

has super-properties: symbiotically interacts with^op
has sub-properties: pollinated by^op, pollinates^op
has sub-property chains: partner in^op o is mutualism^op o

myristoylated by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018003

is inverse of: myristoylates^op

myristoylates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018002

has super-properties: molecularly interacts with^op
is inverse of: myristoylated by^op
has sub-property chains: capable of^op o is myristoyltransferase activity^op o has direct input^op

negatively regulated by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002335

has super-properties: regulated by^op
has sub-properties: has negative regulatory component activity^op
is inverse of: negatively regulates^op

negatively regulates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002212

has super-properties: regulates^op; causally upstream of, negative effect^op
has sub-properties: directly negatively regulates^op, indirectly inhibits^op
is inverse of: negatively regulated by^op
has sub-property chains: r o 0002230 o negatively regulates^op

negatively regulates characteristic^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0019002

has super-properties: regulates characteristic^op
has sub-property chains: negatively regulates^op o positively regulates characteristic^op; positively regulates^op o negatively regulates characteristic^op

obligate parasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002227

has super-properties: parasite of^op

obsolete actively participates in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002217

Obsoleted as the inverse property was obsoleted.

obsolete downstream in neural circuit with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000302

Obsoleted as no longer a useful relationship (all neurons in an organism are in a neural circuit with each other).

obsolete has active participant^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002218

obsolete has direct output^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002402

obsolete has indirect input^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002401

Likely to be obsoleted. See: https://docs.google.com/document/d/1QMhs9J-P_q3o_rDh-IX4ZEnz0PnXrzLRVkI3vvz8NEQ/edit

obsolete has indirect output^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002403

Likely to be obsoleted. See: https://docs.google.com/document/d/1QMhs9J-P_q3o_rDh-IX4ZEnz0PnXrzLRVkI3vvz8NEQ/edit

has sub-property chains: causally upstream of^op o obsolete has direct output^op

obsolete in neural circuit with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000300

Obsoleted as no longer a useful relationship (all neurons in an organism are in a neural circuit with each other).

obsolete related via dependence to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002609

obsolete upstream in neural circuit with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000301

Obsoleted as no longer a useful relationship (all neurons in an organism are in a neural circuit with each other).

occurrent part of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002012

has super-properties: b f o 0000050^op; causally upstream of or within^op
has domain: b f o 0000003
has range: b f o 0000003

occurs across^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002021

has super-properties: has part that occurs in^op
has sub-properties: results in transport across^op

only in taxon^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002160

has super-properties: in taxon^op

output of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002353

has super-properties: r o 0000056; functionally related to^op
has sub-properties: formed as result of^op
is inverse of: has output^op

over-expressed in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002245

has super-properties: expressed in^op

overlaps^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002131

has characteristics : symmetric

has super-properties: mereotopologically related to^op
has sub-properties: b f o 0000050^op, b f o 0000051^op, conduit for^op, contributes to morphology of^op, determined by part of^op, fasciculates with^op, has dendrite location^op, has fasciculating neuron projection^op, has soma location^op, has synaptic terminal in^op, has synaptic terminal of^op, is active in^op, overlaps sequence of^op, partially overlaps^op, spatially coextensive with^op
has sub-property chains: b f o 0000050^op o b f o 0000050^op; b f o 0000051^op o b f o 0000050^op; b f o 0000051^op o overlaps^op; overlaps^op o b f o 0000050^op

overlaps sequence of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002526

has characteristics : symmetric

has super-properties: overlaps^op; sequentially related to^op
has sub-properties: has subsequence^op, is subsequence of^op
has sub-property chains: has subsequence^op o is subsequence of^op

parasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002444

has super-properties: interacts with via parasite-host interaction^op; has host^op
has sub-properties: ectoparasite of^op, endoparasite of^op, facultative parasite of^op, hemiparasite of^op, kleptoparasite of^op, lays eggs in^op, mesoparasite of^op, obligate parasite of^op, parasitoid of^op, root parasite of^op, stem parasite of^op
is inverse of: parasitized by^op
has sub-property chains: subject participant in^op o is parasitism^op o

parasitized by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002445

has super-properties: interacts with via parasite-host interaction^op; host of^op
has sub-properties: has ectoparasite^op, has eggs laid in by^op, has endoparasite^op, has mesoparasite^op, has parasitoid^op, kleptoparasitized by^op
is inverse of: parasite of^op

parasitoid of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002208

has super-properties: parasite of^op
is inverse of: has parasitoid^op

part of developmental precursor of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002287

has super-properties: developmentally succeeded by^op
has sub-property chains: b f o 0000050^op o directly develops into^op

part of structure that is capable of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002329

has super-properties: functionally related to^op
has sub-properties: contributes to^op
has sub-property chains: b f o 0000050^op o capable of^op

partially overlaps^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002151

has super-properties: overlaps^op

participates in a abiotic-biotic interaction with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002446

has super-properties: biotically interacts with^op

participates in a biotic-biotic interaction with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002574

has super-properties: biotically interacts with^op
has sub-properties: allelopath of^op, has vector^op, is killed by^op, is vector for^op, kills^op, symbiotically interacts with^op, trophically interacts with^op, visited by^op, visits^op
has domain: c a r o 0001010
has range: c a r o 0001010

partner in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002461

has super-properties: r o 0000056
has sub-properties: subject participant in^op, target participant in^op

pathogen of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002556

has super-properties: has host^op
is inverse of: has pathogen^op

phenotype of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002201

has characteristics : functional

is inverse of: has phenotype^op

phosphorylates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002447

has super-properties: molecularly interacts with^op
has sub-property chains: capable of^op o is kinase activity^op o has direct input^op

pollinated by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002456

has super-properties: mutualistically interacts with^op
is inverse of: pollinates^op

pollinates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002455

has super-properties: mutualistically interacts with^op
is inverse of: pollinated by^op

positively regulated by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002336

has super-properties: regulated by^op
has sub-properties: has necessary component activity^op, has positive regulatory component activity^op
is inverse of: positively regulates^op

positively regulates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002213

has characteristics : transitive

has super-properties: regulates^op; causally upstream of, positive effect^op
has sub-properties: directly positively regulates^op, indirectly activates^op
is inverse of: positively regulated by^op
has sub-property chains: negatively regulates^op o negatively regulates^op; r o 0002230 o positively regulates^op

positively regulates characteristic^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0019001

has super-properties: regulates characteristic^op
has sub-property chains: positively regulates^op o positively regulates characteristic^op

preyed upon by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002458

has super-properties: trophically interacts with^op
is inverse of: preys on^op

preys on^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002439

has super-properties: trophically interacts with^op
is inverse of: preyed upon by^op

process has causal agent^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002608

has super-properties: causally related to^op
is inverse of: causal agent in process^op

produced by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003001

has domain: b f o 0000040
has range: b f o 0000040
is inverse of: produces^op

produces^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003000

Note that this definition doesn't quite distinguish the output of a transformation process from a production process, which is related to the identity/granularity issue.

has domain: b f o 0000040
has range: b f o 0000040
is inverse of: produced by^op
has sub-property chains: o has output^op

proper distributary of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002382

has super-properties: distributary of^op

proper tributary of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002383

has super-properties: tributary of^op

provides nutrients for^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002469

has super-properties: trophically interacts with^op
is inverse of: acquires nutrients from^op

r o 0002222^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002222

realizable has basis in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004017

has super-properties: causally related to^op
has sub-properties: disease has basis in^op
is inverse of: is basis for realizable^op

realized in response to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009501

has super-properties: causally related to^op
has domain: b f o 0000017
has range: b f o 0000015
has sub-property chains: b f o 0000054 o causally downstream of^op

realized in response to stimulus^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004028

has super-properties: causally related to^op
has domain: b f o 0000017
has range: b f o 0000040
has sub-property chains: realized in response to^op o has input^op

receives input from^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002485

has super-properties: connected to^op
has sub-properties: synapsed by^op
is inverse of: sends output to^op

receives synaptic input from neuron^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013008

has super-properties: synapsed by^op
is inverse of: sends synaptic output to cell^op

receives synaptic input in region^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013002

has super-properties: has postsynaptic terminal in^op; has synaptic IO in region^op
has sub-properties: receives synaptic input throughout^op
has sub-property chains: receives synaptic input in region^op o b f o 0000050^op

receives synaptic input throughout^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013005

has super-properties: receives synaptic input in region^op; has synaptic IO throughout^op

reciprocal of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015012

There are frequently two ways to state the same thing: we can say 'spermatocyte lacks asters' or 'asters absent from spermatocyte'. In this case the quality is 'lacking all parts of type' - it is a (relational) quality of the spermatocyte, and it is with respect to instances of 'aster'. One of the popular requirements of PATO is that it continue to support 'absent', so we need to relate statements which use this quality to the 'lacking all parts of type' quality.

regulated by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002334

has characteristics : transitive

has super-properties: causally downstream of or within^op
has sub-properties: directly regulated by^op, has regulatory component activity^op, negatively regulated by^op, positively regulated by^op
has domain: b f o 0000015
has range: b f o 0000015
is inverse of: regulates^op

regulates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002211

has characteristics : transitive

has super-properties: causally upstream of^op
has sub-properties: directly regulates^op, negatively regulates^op, positively regulates^op
has domain: b f o 0000015
has range: b f o 0000015
is inverse of: regulated by^op
has sub-property chains: regulates^op o has effector activity^op; r o 0002230 o regulates^op; directly regulates^op o directly regulates^op

regulates activity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011002

has super-properties: causally influences^op
has sub-properties: directly regulates activity of^op, indirectly regulates activity of^op
has domain: b f o 0000040
has range: b f o 0000040

regulates characteristic^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0019000

has super-properties: causally related to^op
has sub-properties: negatively regulates characteristic^op, positively regulates characteristic^op
has domain: b f o 0000015
has range: p a t o 0000001
has sub-property chains: regulates^op o regulates characteristic^op

regulates in other organism^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002010

has super-properties: causally upstream of or within^op
has domain: b f o 0000015
has range: b f o 0000015

regulates levels of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002332

has super-properties: functionally related to^op
has domain: b f o 0000015
has range: b f o 0000040

regulates quantity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011003

has super-properties: causally influences^op
has sub-properties: directly regulates quantity of^op, indirectly regulates quantity of^op
has domain: b f o 0000040
has range: b f o 0000040

regulates transport of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002011

has sub-property chains: regulates^op o transports or maintains localization of^op

related via evidence or inference to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002616

has sub-properties: has evidence^op, is evidence for^op, is evidence with support from^op

related via exposure to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002244

has super-properties: causally related to^op
has sub-properties: has exposure medium^op, has exposure receptor^op, has exposure route^op, has exposure stimulus^op, has exposure transport path^op
has domain: exposure event or process^c

related via localization to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002337

has sub-properties: results in transport along^op, results in transport to from or in^op, transports or maintains localization of^op
has domain: b f o 0000015
has range: b f o 0000002

relation between physical entity and a process or stage^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002487

has sub-properties: existence ends during or before^op, existence overlaps^op, existence starts during or after^op
has domain: b f o 0000004
has range: b f o 0000003

releases neurotransmitter^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002111

has domain: c a r o 0000003
has range: b f o 0000040

represses expression of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003002

has super-properties: directly negatively regulates activity of^op
has domain: b f o 0000040
has range: b f o 0000040

results in acquisition of features of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002315

has super-properties: results in developmental progression of^op; results in changes to anatomical or cellular structure^op
has range: c a r o 0000003

results in adhesion of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012007

has super-properties: results in changes to anatomical or cellular structure^op

results in assembly of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002588

has super-properties: results in formation of^op; results in organization of^op

results in breakdown of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002586

has super-properties: has input^op
has sub-properties: results in catabolism of^op, results in disassembly of^op

results in catabolism of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002589

has super-properties: results in breakdown of^op

results in changes to anatomical or cellular structure^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0040036

has super-properties: r o 0000057
has sub-properties: results in acquisition of features of^op, results in adhesion of^op, results in closure of^op, results in development of^op, results in ending of^op, results in growth of^op, results in maturation of^op, results in morphogenesis of^op, results in movement of^op, results in organization of^op, results in structural organization of^op, transports or maintains localization of^op

results in closure of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002585

has super-properties: results in developmental progression of^op; results in changes to anatomical or cellular structure^op

results in commitment to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002348

has super-properties: results in developmental progression of^op
has range: c l 0000000

results in determination of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002349

has super-properties: results in developmental progression of^op
has range: c l 0000000

results in development of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002296

has super-properties: results in developmental progression of^op; results in changes to anatomical or cellular structure^op

results in developmental induction of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002357

has super-properties: results in developmental progression of^op

results in developmental progression of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002295

has super-properties: developmentally related to^op
has sub-properties: results in acquisition of features of^op, results in closure of^op, results in commitment to^op, results in determination of^op, results in development of^op, results in developmental induction of^op, results in ending of^op, results in formation of^op, results in growth of^op, results in maturation of^op, results in morphogenesis of^op, results in specification of^op, results in structural organization of^op
has domain: g o 0008150
has range: c a r o 0000003

results in developmental regression of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002301

has super-properties: results in ending of^op

results in disappearance of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002300

has super-properties: results in ending of^op

results in disassembly of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002590

has super-properties: results in breakdown of^op; results in organization of^op

results in ending of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002552

has super-properties: results in developmental progression of^op; results in changes to anatomical or cellular structure^op
has sub-properties: results in developmental regression of^op, results in disappearance of^op

results in formation of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002297

has super-properties: has output^op; results in developmental progression of^op
has sub-properties: results in assembly of^op, results in synthesis of^op
is inverse of: formed as result of^op

results in fusion of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012008

has super-properties: results in organization of^op

results in growth of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002343

has super-properties: results in developmental progression of^op; results in changes to anatomical or cellular structure^op

results in maturation of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002299

has super-properties: results in developmental progression of^op; results in changes to anatomical or cellular structure^op

results in morphogenesis of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002298

has super-properties: results in developmental progression of^op; results in changes to anatomical or cellular structure^op

results in movement of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002565

has super-properties: results in changes to anatomical or cellular structure^op

results in organization of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002592

has super-properties: results in changes to anatomical or cellular structure^op
has sub-properties: results in assembly of^op, results in disassembly of^op, results in fusion of^op, results in remodeling of^op

results in remodeling of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002591

has super-properties: has input^op; results in organization of^op

results in specification of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002356

has super-properties: results in developmental progression of^op
has range: c l 0000000

results in structural organization of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002355

has super-properties: results in developmental progression of^op; results in changes to anatomical or cellular structure^op

results in synthesis of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002587

has super-properties: results in formation of^op

results in transport across^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002342

has super-properties: occurs across^op; results in transport to from or in^op

results in transport along^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002341

has super-properties: related via localization to^op

results in transport to from or in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002344

has super-properties: related via localization to^op
has sub-properties: has target end location^op, has target start location^op, results in transport across^op

ribosomal translation of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002512

has super-properties: genomically related to^op
has domain: b f o 0000031 or b f o 0000040
has range: b f o 0000031 or b f o 0000040
is inverse of: ribosomally translates to^op

ribosomally translates to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002513

has super-properties: genomically related to^op
has domain: b f o 0000031 or b f o 0000040
has range: b f o 0000031 or b f o 0000040
is inverse of: ribosomal translation of^op

root parasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002236

has super-properties: parasite of^op

sends output to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002486

has super-properties: connected to^op
has sub-properties: synapsed to^op
is inverse of: receives input from^op

sends synaptic output throughout^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013006

has super-properties: sends synaptic output to region^op; has synaptic IO throughout^op

sends synaptic output to cell^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013009

Not restricting range to 'cell' - object may be a muscle containing a cell targeted by the neuron.

has super-properties: synapsed to^op
is inverse of: receives synaptic input from neuron^op

sends synaptic output to region^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013003

has super-properties: has presynaptic terminal in^op; has synaptic IO in region^op
has sub-properties: sends synaptic output throughout^op
has sub-property chains: sends synaptic output to region^op o b f o 0000050^op

sequentially adjacent to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002515

has super-properties: does not overlap sequence of^op
has sub-properties: is immediately downstream of sequence of^op, is immediately upstream of sequence of^op

sequentially related to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002514

has sub-properties: bounds sequence of^op, does not overlap sequence of^op, is bound by sequence of^op, is sequentially aligned with^op, overlaps sequence of^op
has domain: sequentially ordered entity^c
has range: sequentially ordered entity^c

serially homologous to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002159

has characteristics : symmetric, transitive

has super-properties: evolutionarily related to^op

shares ancestor with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002158

VBO calls this homologous_to

has characteristics : symmetric, transitive

has super-properties: evolutionarily related to^op
has sub-property chains: derived by descent from^op o has derived by descendant^op

similar in magnitude relative to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015009

skeleton of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002576

has super-properties: b f o 0000050^op
has domain: c a r o 0000003
has range: c a r o 0000003
is inverse of: has skeleton^op

spatially coextensive with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002379

has super-properties: overlaps^op
has sub-property chains: r o 0001025 o

spatially disjoint from^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002163

has super-properties: mereotopologically related to^op
has sub-properties: adjacent to^op

stabilizes quantity of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011015

has super-properties: directly positively regulates quantity of^op
has domain: b f o 0000040
has range: b f o 0000040

stem parasite of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002235

has super-properties: parasite of^op

subcluster of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015003

has characteristics : transitive

has super-properties: b f o 0000050^op

subject participant in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002462

has super-properties: partner in^op

supplies^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002178

has super-properties: connected to^op

surrounded by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002219

has super-properties: adjacent to^op
is inverse of: surrounds^op

surrounds^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002221

has super-properties: adjacent to^op
is inverse of: surrounded by^op

symbiotically interacts with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002440

has characteristics : symmetric

has super-properties: participates in a biotic-biotic interaction with^op
has sub-properties: commensually interacts with^op, epiphyte of^op, has epiphyte^op, has host^op, host of^op, interacts with via parasite-host interaction^op, mutualistically interacts with^op
has sub-property chains: partner in^op o is symbiosis^op o

synapsed by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002103

has super-properties: receives input from^op
has sub-properties: receives synaptic input from neuron^op, synapsed_by_via_type_III_bouton^op, synapsed_by_via_type_II_bouton^op, synapsed_by_via_type_Ib_bouton^op, synapsed_by_via_type_Is_bouton^op
has range: c l 0000540 or (b f o 0000050^op some c l 0000540)
is inverse of: synapsed to^op

synapsed to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002120

N1 synapsed_to some N2 Expands to: N1 SubclassOf ( has_part some ( ‘pre-synaptic membrane ; GO:0042734’ that part_of some ( ‘synapse ; GO:0045202’ that has_part some ( ‘post-synaptic membrane ; GO:0045211’ that part_of some N2))))

has super-properties: sends output to^op
has sub-properties: sends synaptic output to cell^op, synapsed_via_type_III_bouton_to^op, synapsed_via_type_II_bouton_to^op, synapsed_via_type_Ib_bouton_to^op, synapsed_via_type_Is_bouton_to^op
has domain: c l 0000540 or (b f o 0000050^op some c l 0000540)
is inverse of: synapsed by^op

synapsed_by_via_type_Ib_bouton^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002109

Expands to: has_part some ('presynaptic membrane' that part_of some ('synapse' that has_part some ('type Ib terminal button' that has_part some 'postsynaptic membrane' that part_of some ?Y)))))

has super-properties: synapsed by^op
is inverse of: synapsed_via_type_Ib_bouton_to^op

synapsed_by_via_type_II_bouton^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002108

Expands to: has_part some ('presynaptic membrane' that part_of some ('synapse' that has_part some ('type II terminal button' that has_part some 'postsynaptic membrane' that part_of some ?Y)))))

has super-properties: synapsed by^op
is inverse of: synapsed_via_type_II_bouton_to^op

synapsed_by_via_type_III_bouton^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002115

Expands to: has_part some ('presynaptic membrane' that part_of some ('synapse' that has_part some ('type III terminal button' that has_part some 'postsynaptic membrane' that part_of some ?Y)))))

has super-properties: synapsed by^op
is inverse of: synapsed_via_type_III_bouton_to^op

synapsed_by_via_type_Is_bouton^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002112

Expands to: has_part some ('presynaptic membrane' that part_of some ('synapse' that has_part some ('type Is terminal button' that has_part some 'postsynaptic membrane' that part_of some ?Y)))))

has super-properties: synapsed by^op
is inverse of: synapsed_via_type_Is_bouton_to^op

synapsed_via_type_Ib_bouton_to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002105

Expands to: has_part some ('type Ib terminal button' that has_part some ('pre-synaptic membrane' that part_of some ('synapse' that has_part some ('post-synaptic membrane' that part_of some ?Y))))

has super-properties: synapsed to^op
is inverse of: synapsed_by_via_type_Ib_bouton^op

synapsed_via_type_II_bouton_to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002107

Expands to: has_part some ('type II terminal button' that has_part some ('pre-synaptic membrane' that part_of some ('synapse' that has_part some ('post-synaptic membrane' that part_of some ?Y))))

has super-properties: synapsed to^op
is inverse of: synapsed_by_via_type_II_bouton^op

synapsed_via_type_III_bouton_to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002114

Expands to: has_part some ('type III terminal button' that has_part some ('pre-synaptic membrane' that part_of some ('synapse' that has_part some ('post-synaptic membrane' that part_of some ?Y))))

has super-properties: synapsed to^op
is inverse of: synapsed_by_via_type_III_bouton^op

synapsed_via_type_Is_bouton_to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002106

Expands to: has_part some ('type Is terminal button' that has_part some ('pre-synaptic membrane' that part_of some ('synapse' that has_part some ('post-synaptic membrane' that part_of some ?Y))))

has super-properties: synapsed to^op
is inverse of: synapsed_by_via_type_Is_bouton^op

target participant in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002463

has super-properties: partner in^op

towards^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002503

has super-properties: depends on^op

tracheates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002004

has super-properties: contained in^op
has domain: c a r o 0000003
has range: c a r o 0000003

transcribed from^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002510

has super-properties: genomically related to^op
has domain: b f o 0000031 or b f o 0000040
has range: b f o 0000031 or b f o 0000040
is inverse of: transcribed to^op

transcribed to^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002511

has super-properties: genomically related to^op
is inverse of: transcribed from^op

transformation of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002494

has characteristics : transitive

has super-properties: develops from^op
has sub-properties: immediate transformation of^op

transitively provides input for^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002414

has characteristics : transitive

has super-properties: causally upstream of^op
has sub-properties: directly provides input for^op
has domain: b f o 0000015
has range: b f o 0000015

transmitted by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002451

has super-properties: ecologically related to^op

transports^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002020

has super-properties: transports or maintains localization of^op
has sub-properties: exports^op, imports^op

transports or maintains localization of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002313

has super-properties: related via localization to^op; results in changes to anatomical or cellular structure^op
has sub-properties: transports^op

tributary of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002376

has super-properties: connected to^op; in branching relationship with^op
has sub-properties: proper tributary of^op

trophically interacts with^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002438

has super-properties: participates in a biotic-biotic interaction with^op
has sub-properties: acquires nutrients from^op, eats^op, is eaten by^op, preyed upon by^op, preys on^op, provides nutrients for^op

ubiquitinates^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002480

has super-properties: molecularly interacts with^op
has sub-property chains: capable of^op o is ubiquitination^op o has direct input^op

ubiquitously expressed in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002291

has super-properties: expressed in^op
is inverse of: ubiquitously expresses^op

ubiquitously expresses^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002293

has super-properties: expresses^op
is inverse of: ubiquitously expressed in^op

under-expressed in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002246

has super-properties: expressed in^op

utilizes^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0017001

has sub-property chains: capable of^op o has input^op

visited by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002619

has super-properties: participates in a biotic-biotic interaction with^op
has sub-properties: has eggs laid in by^op, has eggs laid on by^op, has flowers visited by^op
is inverse of: visits^op

visits^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002618

has super-properties: participates in a biotic-biotic interaction with^op
has sub-properties: lays eggs in^op, lays eggs on^op, visits flowers of^op
is inverse of: visited by^op

visits flowers of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002622

has super-properties: visits^op
is inverse of: has flowers visited by^op

This HTML document was obtained by processing the OWL ontology source code through LODE, Live OWL Documentation Environment, developed by Silvio Peroni .

OBO Relations Ontology

Table of Content

Introduction

Classes

c h e b i 50906c back to ToC or Class ToC

c l 0000101c back to ToC or Class ToC

exposure event or processc back to ToC or Class ToC

g o 0004872c back to ToC or Class ToC

g o 0019107c back to ToC or Class ToC

imagec back to ToC or Class ToC

sequence atomic unitc back to ToC or Class ToC

sequence bearerc back to ToC or Class ToC

sequentially ordered entityc back to ToC or Class ToC

Object Properties

acquires nutrients fromop back to ToC or Object Property ToC

active ingredient inop back to ToC or Object Property ToC

acts on population ofop back to ToC or Object Property ToC

acts upstream ofop back to ToC or Object Property ToC

acts upstream of or withinop back to ToC or Object Property ToC

acts upstream of or within, negative effectop back to ToC or Object Property ToC

acts upstream of or within, positive effectop back to ToC or Object Property ToC

acts upstream of, negative effectop back to ToC or Object Property ToC

acts upstream of, positive effectop back to ToC or Object Property ToC

adjacent toop back to ToC or Object Property ToC

aligned withop back to ToC or Object Property ToC

allelopath ofop back to ToC or Object Property ToC

ameliorates conditionop back to ToC or Object Property ToC

anabranch ofop back to ToC or Object Property ToC

attached toop back to ToC or Object Property ToC

attached to part ofop back to ToC or Object Property ToC

axon synapses inop back to ToC or Object Property ToC

b f o 0000050op back to ToC or Object Property ToC

b f o 0000051op back to ToC or Object Property ToC

biomechanically related toop back to ToC or Object Property ToC

biotically interacts withop back to ToC or Object Property ToC

bounding layer ofop back to ToC or Object Property ToC

bounds sequence ofop back to ToC or Object Property ToC

branching part ofop back to ToC or Object Property ToC

capable ofop back to ToC or Object Property ToC

capable of inhibiting or preventing pathological processop back to ToC or Object Property ToC

capable of negatively regulatingop back to ToC or Object Property ToC

capable of part ofop back to ToC or Object Property ToC

capable of positively regulatingop back to ToC or Object Property ToC

capable of regulatingop back to ToC or Object Property ToC

capable of upregulating or causing pathological processop back to ToC or Object Property ToC

causal agent in processop back to ToC or Object Property ToC

causal relation between entitiesop back to ToC or Object Property ToC

causal relation between material entity and a processop back to ToC or Object Property ToC

causal relation between processesop back to ToC or Object Property ToC

causal relationship with disease as subjectop back to ToC or Object Property ToC

causally downstream ofop back to ToC or Object Property ToC

causally downstream of or withinop back to ToC or Object Property ToC

causally influenced byop back to ToC or Object Property ToC

causally influencesop back to ToC or Object Property ToC

causally related toop back to ToC or Object Property ToC

causally upstream ofop back to ToC or Object Property ToC

causally upstream of or withinop back to ToC or Object Property ToC

causally upstream of or within, negative effectop back to ToC or Object Property ToC

causally upstream of or within, positive effectop back to ToC or Object Property ToC

causally upstream of, negative effectop back to ToC or Object Property ToC

causally upstream of, positive effectop back to ToC or Object Property ToC

causes conditionop back to ToC or Object Property ToC

causes or contributes to conditionop back to ToC or Object Property ToC

cell expressesop back to ToC or Object Property ToC

characteristic of part ofop back to ToC or Object Property ToC

child nucleus ofop back to ToC or Object Property ToC

child nucleus of in hermaphroditeop back to ToC or Object Property ToC

child nucleus of in maleop back to ToC or Object Property ToC

co-roosts withop back to ToC or Object Property ToC

coincident withop back to ToC or Object Property ToC

colocalizes withop back to ToC or Object Property ToC

commensually interacts withop back to ToC or Object Property ToC

composed primarily ofop back to ToC or Object Property ToC

condition ameliorated byop back to ToC or Object Property ToC

condition exacerbated byop back to ToC or Object Property ToC

condition has genetic basis inop back to ToC or Object Property ToC

conduit forop back to ToC or Object Property ToC

confers advantage inop back to ToC or Object Property ToC

confers susceptibility to conditionop back to ToC or Object Property ToC

connected toop back to ToC or Object Property ToC

c h e b i 50906^c back to ToC or Class ToC

c l 0000101^c back to ToC or Class ToC

exposure event or process^c back to ToC or Class ToC

g o 0004872^c back to ToC or Class ToC

g o 0019107^c back to ToC or Class ToC

image^c back to ToC or Class ToC

sequence atomic unit^c back to ToC or Class ToC

sequence bearer^c back to ToC or Class ToC

sequentially ordered entity^c back to ToC or Class ToC

acquires nutrients from^op back to ToC or Object Property ToC

active ingredient in^op back to ToC or Object Property ToC

acts on population of^op back to ToC or Object Property ToC

acts upstream of^op back to ToC or Object Property ToC

acts upstream of or within^op back to ToC or Object Property ToC

acts upstream of or within, negative effect^op back to ToC or Object Property ToC

acts upstream of or within, positive effect^op back to ToC or Object Property ToC

acts upstream of, negative effect^op back to ToC or Object Property ToC

acts upstream of, positive effect^op back to ToC or Object Property ToC

adjacent to^op back to ToC or Object Property ToC

aligned with^op back to ToC or Object Property ToC

allelopath of^op back to ToC or Object Property ToC

ameliorates condition^op back to ToC or Object Property ToC

anabranch of^op back to ToC or Object Property ToC

attached to^op back to ToC or Object Property ToC

attached to part of^op back to ToC or Object Property ToC

axon synapses in^op back to ToC or Object Property ToC

b f o 0000050^op back to ToC or Object Property ToC

b f o 0000051^op back to ToC or Object Property ToC

biomechanically related to^op back to ToC or Object Property ToC

biotically interacts with^op back to ToC or Object Property ToC

bounding layer of^op back to ToC or Object Property ToC

bounds sequence of^op back to ToC or Object Property ToC

branching part of^op back to ToC or Object Property ToC

capable of^op back to ToC or Object Property ToC

capable of inhibiting or preventing pathological process^op back to ToC or Object Property ToC

capable of negatively regulating^op back to ToC or Object Property ToC

capable of part of^op back to ToC or Object Property ToC

capable of positively regulating^op back to ToC or Object Property ToC

capable of regulating^op back to ToC or Object Property ToC

capable of upregulating or causing pathological process^op back to ToC or Object Property ToC

causal agent in process^op back to ToC or Object Property ToC

causal relation between entities^op back to ToC or Object Property ToC

causal relation between material entity and a process^op back to ToC or Object Property ToC

causal relation between processes^op back to ToC or Object Property ToC

causal relationship with disease as subject^op back to ToC or Object Property ToC

causally downstream of^op back to ToC or Object Property ToC

causally downstream of or within^op back to ToC or Object Property ToC

causally influenced by^op back to ToC or Object Property ToC

causally influences^op back to ToC or Object Property ToC

causally related to^op back to ToC or Object Property ToC

causally upstream of^op back to ToC or Object Property ToC

causally upstream of or within^op back to ToC or Object Property ToC

causally upstream of or within, negative effect^op back to ToC or Object Property ToC

causally upstream of or within, positive effect^op back to ToC or Object Property ToC

causally upstream of, negative effect^op back to ToC or Object Property ToC

causally upstream of, positive effect^op back to ToC or Object Property ToC

causes condition^op back to ToC or Object Property ToC

causes or contributes to condition^op back to ToC or Object Property ToC

cell expresses^op back to ToC or Object Property ToC

characteristic of part of^op back to ToC or Object Property ToC

child nucleus of^op back to ToC or Object Property ToC

child nucleus of in hermaphrodite^op back to ToC or Object Property ToC

child nucleus of in male^op back to ToC or Object Property ToC

co-roosts with^op back to ToC or Object Property ToC

coincident with^op back to ToC or Object Property ToC

colocalizes with^op back to ToC or Object Property ToC

commensually interacts with^op back to ToC or Object Property ToC

composed primarily of^op back to ToC or Object Property ToC

condition ameliorated by^op back to ToC or Object Property ToC

condition exacerbated by^op back to ToC or Object Property ToC

condition has genetic basis in^op back to ToC or Object Property ToC

conduit for^op back to ToC or Object Property ToC

confers advantage in^op back to ToC or Object Property ToC

confers susceptibility to condition^op back to ToC or Object Property ToC

connected to^op back to ToC or Object Property ToC

connecting branch of^op back to ToC or Object Property ToC

connects^op back to ToC or Object Property ToC

contained in^op back to ToC or Object Property ToC

contains^op back to ToC or Object Property ToC

continuous with^op back to ToC or Object Property ToC