OBO Relations Ontology

IRI:
http://purl.obolibrary.org/obo/ro.owl
Version IRI:
http://purl.obolibrary.org/obo/ro/releases/2024-04-24/ro.owl
Current version :
2024-04-24
Other visualisation :
Ontology source - WebVowl

Table of Content

  1. Classes
  2. Object Properties
  3. Data Properties
  4. Named Individuals
  5. Annotation Properties
  6. General Axioms
  7. SWRL Rules
  8. Namespace Declarations

Classes

anatomical entityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001062

has super-classes
independent continuantc
has sub-classes
immaterial anatomical entityc, material anatomical entityc
is in domain of
develops inop, has developmental contribution fromop, has developmental potential involvingop
is in range of
has developmental contribution fromop, has developmental potential involvingop, results in developmental progression ofop

anatomical structurec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000061

has super-classes
material anatomical entityc
has sub-classes
cellc, multicellular anatomical structurec, neuron projection bundlec
is in domain of
attached to part ofop, biomechanically related toop, has muscle insertionop, has muscle originop, has skeletonop, innervated_byop, releases neurotransmitterop, skeleton ofop, tracheatesop
is in range of
attached to part ofop, biomechanically related toop, directly supplies and drainsop, disease arises from alteration in structureop, results in acquisition of features ofop, skeleton ofop, tracheatesop, vessel drains blood fromop, vessel supplies blood toop

assayc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000070

has super-classes
planned processc
is in domain of
assay measures characteristicop
is in range of
characteristic measured by assayop

biological processc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0008150

A biological process is an evolved process
has super-classes
processc
is in domain of
results in developmental progression ofop
is disjoint with
gene product or complex activityc, planned processc

blood vesselc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001981

has super-classes
multicellular anatomical structurec
has sub-classes
capillaryc
is in domain of
vessel drains blood fromop, vessel supplies blood toop

branchedc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000402

has super-classes
qualityc

c h e b i 50906c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CHEBI_50906

has super-classes
qualityc

capillaryc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0001982

has super-classes
blood vesselc
is in domain of
directly supplies and drainsop

cellc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000000

CL and GO definitions of cell differ based on inclusive or exclusive of cell wall, etc.
has super-classes
anatomical structurec
has sub-classes
neuronc
is in domain of
cell expressesop, has characterizing marker setop, has high plasma membrane amountop, has low plasma membrane amountop
is in range of
results in commitment toop, results in determination ofop, results in specification ofop

cell nucleusc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0005634

has super-classes
material entityc
is in domain of
child nucleus ofop
is in range of
child nucleus ofop

characteristicc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000020

A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same.
has super-classes
continuantc
part ofop only characteristicc
has sub-classes
qualityc, qualityc, realizablec
is in domain of
characteristic measured by assayop, concretizesop, has modifierop
is in range of
assay measures characteristicop, differs in attributeop, has characteristicop, has modifierop, is concretized asop
is disjoint with
independent continuantc, generically dependent continuantc

containerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000967

has super-classes
devicec
is in domain of
contains measured amountop, has maximum capacityop

continuantc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000002

has super-classes
part ofop only continuantc
has prototypeop only continuantc
in similarity relationship withop only continuantc
has sub-classes
characteristicc, generically dependent continuantc, independent continuantc
is in domain of
causal relation between entitiesop, causally influencesop, developmentally preceded byop, expressed inop, genomically related toop, has gene productop, participates inop
is in range of
causal relation between entitiesop, causally influencesop, developmentally preceded byop, gene product ofop, genomically related toop, has participantop, related via localization toop
is disjoint with
occurrentc

curation status specificationc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000078

is equivalent to
{ example to be eventually removed , metadata complete , organizational term , ready for release , metadata incomplete , uncurated , pending final vetting , to be replaced with external ontology term , requires discussion }
has members
pending final vettingni, requires discussionni

devicec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000968

has super-classes
processed materialc
has sub-classes
containerc

diseasec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OGMS_0000031

has super-classes
dispositionc
is in domain of
causal relationship with disease as subjectop, disease causes disruption ofop, disease causes dysfunction ofop, disease has basis inop, disease has basis in featureop, disease has featureop, disease has inflammation siteop, disease has locationop, has symptomop

dispositionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000016

has super-classes
realizablec
has sub-classes
diseasec, functionc
is in range of
has dispositionop
is disjoint with
rolec

environmental systemc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ENVO_01000254

In ENVO's alignment with the Basic Formal Ontology, this class is being considered as a subclass of a proposed BFO class "system". The relation "environed_by" is also under development. Roughly, a system which includes a material entity (at least partially) within its site and causally influences that entity may be considered to environ it. Following the completion of this alignment, this class' definition and the definitions of its subclasses will be revised.
has super-classes
systemc
has sub-classes
habitatc
is in range of
confers advantage inop, has habitatop

exposure of organismc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0001000

has super-classes
processc
is in domain of
related via exposure toop

functionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000034

has super-classes
dispositionc
is in domain of
function ofop
is in range of
has functionop

gene product or complex activityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0003674

Note that, in addition to forming the root of the molecular function ontology, this term is recommended for use for the annotation of gene products whose molecular function is unknown. When this term is used for annotation, it indicates that no information was available about the molecular function of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. Despite its name, this is not a type of 'function' in the sense typically defined by upper ontologies such as Basic Formal Ontology (BFO). It is instead a BFO:process carried out by a single gene product or complex.
has super-classes
processc
has sub-classes
kinase activityc, myristoyltransferase activityc, ubiquitin-protein transferase activityc
is disjoint with
biological processc

generically dependent continuantc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000031

A continuant that is dependent on one or other independent continuant bearers. For every instance of A requires some instance of (an independent continuant type) B but which instance of B serves can change from time to time.
has super-classes
continuantc
part ofop only generically dependent continuantc
has sub-classes
information content entityc
is in domain of
generically depends onop, is concretized asop
is in range of
concretizesop, is carrier ofop
is disjoint with
independent continuantc, characteristicc

habitatc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/ENVO_01000739

A habitat's specificity to an ecological population differentiates it from other environment classes.
has super-classes
environmental systemc
is in range of
has roostop

immaterial anatomical entityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000466

has super-classes
immaterial entityc
anatomical entityc
is disjoint with
material anatomical entityc

immaterial entityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000141

has super-classes
independent continuantc
has sub-classes
immaterial anatomical entityc, spatial regionc
is in domain of
luminal space ofop
is in range of
has 2D boundaryop
is disjoint with
material entityc

independent continuantc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000004

A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything.
has super-classes
continuantc
part ofop only independent continuantc
has sub-classes
anatomical entityc, immaterial entityc, material entityc
is in domain of
adjacent toop, capable ofop, connectsop, continuous withop, develops fromop, gene product ofop, has dispositionop, has functionop, has roleop, is carrier ofop, located inop, relation between physical entity and a process or stageop
is in range of
adjacent toop, continuous withop, develops fromop, disease has inflammation siteop, disease has locationop, generically depends onop, has end locationop, has gene productop, has part that occurs inop, has start locationop, located inop, occurs inop
is disjoint with
characteristicc, generically dependent continuantc

information content entityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000030

has super-classes
generically dependent continuantc

kinase activityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0016301

Note that this term encompasses all activities that transfer a single phosphate group; although ATP is by far the most common phosphate donor, reactions using other phosphate donors are included in this term.
has super-classes
gene product or complex activityc
is kinase activityop

laminarc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0002124

has super-classes
qualityc

linearc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001199

has super-classes
qualityc

material anatomical entityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000465

has super-classes
material entityc
anatomical entityc
has sub-classes
anatomical structurec
is in domain of
developmentally induced byop, has plasma membrane partop
is in range of
developmentally induced byop, disease causes dysfunction ofop, disease has basis in dysfunction ofop, expressed inop, has plasma membrane partop, has skeletonop, has soma locationop
is disjoint with
immaterial anatomical entityc

material entityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000040

has super-classes
independent continuantc
has sub-classes
cell nucleusc, material anatomical entityc, organismc, processed materialc, systemc
is in domain of
biotically interacts withop, causal relation between material entity and a processop, colocalizes withop, composed primarily ofop, conduit forop, decreases by repression quantity ofop, destabilizes quantity ofop, directly negatively regulates activity ofop, directly negatively regulates quantity ofop, directly positively regulates activity ofop, directly positively regulates quantity ofop, directly regulates activity ofop, has 2D boundaryop, has active ingredientop, has consumerop, has substance addedop, has substance removedop, immersed inop, in branching relationship withop, increases by expression quantity ofop, increases expression ofop, indirectly positively regulates activity ofop, indirectly regulates activity ofop, interacts withop, is allergic trigger forop, is autoimmune trigger forop, produced byop, producesop, regulates activity ofop, regulates quantity ofop, represses expression ofop, stabilizes quantity ofop
is in range of
biotically interacts withop, bounding layer ofop, colocalizes withop, composed primarily ofop, conduit forop, decreases by repression quantity ofop, destabilizes quantity ofop, determined byop, determined by part ofop, directly negatively regulates activity ofop, directly negatively regulates quantity ofop, directly positively regulates activity ofop, directly positively regulates quantity ofop, directly regulates activity ofop, has active ingredientop, has allergic triggerop, has autoimmune triggerop, has substance addedop, has substance removedop, immersed inop, in branching relationship withop, increases by expression quantity ofop, increases expression ofop, indirectly positively regulates activity ofop, indirectly regulates activity ofop, interacts withop, lumen ofop, produced byop, producesop, realized in response to stimulusop, regulates activity ofop, regulates levels ofop, regulates quantity ofop, releases neurotransmitterop, represses expression ofop, stabilizes quantity ofop
is disjoint with
immaterial entityc

measurement datumc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/COB_0000121

is in range of
contains measured amountop, has maximum capacityop

multicellular anatomical structurec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0010000

has super-classes
anatomical structurec
has sub-classes
blood vesselc

myristoyltransferase activityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0019107

has super-classes
gene product or complex activityc
is myristoyltransferase activityop

neuronc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000540

These cells are also reportedly CD4-negative and CD200-positive. They are also capable of producing CD40L and IFN-gamma.
has super-classes
cellc
has sub-classes
sensory neuronc
is in domain of
axon synapses inop, dendrite synapsed inop, fasciculates withop, has postsynaptic terminal inop, has presynaptic terminal inop, has soma locationop, has synaptic terminal inop

neuron projection bundlec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UBERON_0000122

has super-classes
anatomical structurec
is in domain of
has fasciculating neuron projectionop, innervatesop
is in range of
fasciculates withop, innervated_byop

obsolete exposure event or processc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/RO_0002310

occurrentc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000003

has super-classes
part ofop only occurrentc
in similarity relationship withop only occurrentc
has sub-classes
processc
is in domain of
causal relation between processesop, has part that occurs inop, has participantop, occurrent part ofop, occurs inop, preceded byop, precedesop, starts duringop, temporally related toop
is in range of
causal relation between processesop, occurrent part ofop, participates inop, preceded byop, precedesop, relation between physical entity and a process or stageop, starts duringop, temporally related toop
is disjoint with
continuantc

organismc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0100026

has super-classes
material entityc
is in domain of
creates habitat forop, ecologically co-occurs withop, has habitatop, has roostop, participates in a biotic-biotic interaction withop
is in range of
creates habitat forop, ecologically co-occurs withop, has consumerop, in taxonop, participates in a biotic-biotic interaction withop

phenotypec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/UPHENO_0001001

has super-classes
qualityc
is in range of
has phenotypeop

planned processc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000011

has super-classes
processc
has sub-classes
assayc
is disjoint with
biological processc

processc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000015

An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t.
has super-classes
occurrentc
has prototypeop only processc
has sub-classes
biological processc, exposure of organismc, gene product or complex activityc, planned processc
is in domain of
has component processop, has end locationop, has inputop, has start locationop, realizesop, regulated byop, regulatesop, regulates characteristicop, regulates in another organismop, regulates levels ofop, related via localization toop, transitively provides input forop
is in range of
capable ofop, causal relation between material entity and a processop, disease causes disruption ofop, disease has basis in disruption ofop, has component processop, realized inop, realized in response toop, regulated byop, regulatesop, regulates in another organismop, transitively provides input forop

processed materialc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000047

has super-classes
material entityc
has sub-classes
devicec

proportionality toc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0001470

Examples: height to weight; brain size to body size. These could all be children of proportionality. Proportions can be measured as ratios. Some measures may be dimensionless. Not all ratios measure proportionality, eg m/s measures velocity which is not a proportion in the sense defined above, it is a quality in its own right.
has super-classes
qualityc
is in domain of
has denominatorop, has numeratorop

qualityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000019

has super-classes
characteristicc
part ofop only qualityc
is in range of
has qualityop
is disjoint with
realizablec

qualityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/PATO_0000001

has super-classes
characteristicc
has sub-classes
branchedc, c h e b i 50906c, laminarc, linearc, phenotypec, proportionality toc
is in domain of
decreased in magnitude relative toop, different in magnitude relative toop, increased in magnitude relative toop
is in range of
decreased in magnitude relative toop, different in magnitude relative toop, has denominatorop, has numeratorop, increased in magnitude relative toop, regulates characteristicop

realizablec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000017

has super-classes
characteristicc
part ofop only realizablec
has sub-classes
dispositionc, rolec
is in domain of
condition has genetic basis inop, realized inop, realized in response toop, realized in response to stimulusop
is in range of
is genetic basis for conditionop, realizesop
is disjoint with
qualityc

rolec back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000023

has super-classes
realizablec
is in range of
has roleop
is disjoint with
dispositionc

sensory neuronc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/CL_0000101

has super-classes
neuronc
is in domain of
has sensory dendrite inop

sequence atomic unitc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/RO_0002533

has super-classes
sequentially ordered entityc

sequence bearerc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/RO_0002534

has super-classes
sequentially ordered entityc

sequentially ordered entityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/RO_0002532

has super-classes
has subsequenceop some sequence atomic unitc
has sub-classes
sequence atomic unitc, sequence bearerc
is in domain of
sequentially related toop
is in range of
sequentially related toop

spatial regionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000006

has super-classes
immaterial entityc

systemc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/RO_0002577

has super-classes
material entityc
has sub-classes
environmental systemc
is in domain of
determined byop, determined by part ofop

ubiquitin-protein transferase activityc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/GO_0004842

has super-classes
gene product or complex activityc
is ubiquitinationop

Object Properties

2D boundary ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002000

has super-properties
mereotopologically related toop
is inverse of
has 2D boundaryop

acquires nutrients fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002457

has super-properties
biotically interacts withop
is inverse of
provides nutrients forop

active ingredient inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002249

has super-properties
part ofop
is inverse of
has active ingredientop

acts on population ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012003

has super-properties
has participantop

acts upstream ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002263

has super-properties
acts upstream of or withinop
has sub-properties
acts upstream of, negative effectop, acts upstream of, positive effectop, involved in regulation ofop
has sub-property chains
enablesop o causally upstream ofop

acts upstream of or withinop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002264

has super-properties
causal agent in processop
has sub-properties
acts upstream ofop, acts upstream of or within, negative effectop, acts upstream of or within, positive effectop, involved in or involved in regulation ofop
has sub-property chains
enablesop o causally upstream of or withinop

acts upstream of or within, negative effectop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004033

has super-properties
acts upstream of or withinop
has sub-properties
acts upstream of, negative effectop
has sub-property chains
enablesop o causally upstream of or within, negative effectop

acts upstream of or within, positive effectop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004032

has super-properties
acts upstream of or withinop
has sub-properties
acts upstream of, positive effectop
has sub-property chains
enablesop o causally upstream of or within, positive effectop

acts upstream of, negative effectop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004035

has super-properties
acts upstream ofop
acts upstream of or within, negative effectop
has sub-property chains
enablesop o causally upstream of, negative effectop

acts upstream of, positive effectop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004034

has super-properties
acts upstream ofop
acts upstream of or within, positive effectop
has sub-property chains
enablesop o causally upstream of, positive effectop

adjacent toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002220

has super-properties
spatially disjoint fromop
has sub-properties
surrounded byop, surroundsop
has domain
independent continuantc
has range
independent continuantc

aligned withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002001

allelopath ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002555

has super-properties
participates in a biotic-biotic interaction withop

ameliorates conditionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003307

Genetic variations can span any level of granularity from a full genome or genotype to an individual gene or sequence alteration. These variations can be represented at the physical level (DNA/RNA macromolecules or their parts, as in the ChEBI ontology and Molecular Sequence Ontology) or at the abstract level (generically dependent continuant sequence features that are carried by these macromolecules, as in the Sequence Ontology and Genotype Ontology). The causal relations in this hierarchy can be used in linking either physical or abstract genetic variations to phenotypes or diseases they cause or contribute to. Environmental exposures include those imposed by natural environments, experimentally applied conditions, or clinical interventions.
has super-properties
contributes to severity of conditionop

anabranch ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002378

has super-properties
distributary ofop

assay measures characteristicop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009006

has domain
assayc
has range
characteristicc
is inverse of
characteristic measured by assayop

attached toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002371

has characteristics : symmetric

has super-properties
connected toop
attached to part ofop
has sub-properties
has muscle insertionop, has muscle originop

attached to part ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002177

has super-properties
mereotopologically related toop
biomechanically related toop
has sub-properties
attached toop
has domain
anatomical structurec
has range
anatomical structurec
has sub-property chains
attached toop o part ofop

axon synapses inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002102

has super-properties
has presynaptic terminal inop
has domain
neuronc
has sub-property chains
axon synapses inop o part ofop

beforeop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002083

t1 before t2 iff:= t1 before_or_simulataneous_with t2 and not (t1 simultaeous_with t2)

has characteristics : transitive

has super-properties
before or simultaneous withop

before or simultaneous withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002081

Primitive instance level timing relation between events
has super-properties
temporally related toop
has sub-properties
beforeop, simultaneous withop

biomechanically related toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002567

has super-properties
functionally related toop
has sub-properties
attached to part ofop, has muscle antagonistop, has muscle insertionop, has muscle originop
has domain
anatomical structurec
has range
anatomical structurec

biotically interacts withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002437

has characteristics : symmetric

has super-properties
ecologically related toop
interacts withop
has sub-properties
acquires nutrients fromop, eatsop, is eaten byop, participates in a abiotic-biotic interaction withop, participates in a biotic-biotic interaction withop, provides nutrients forop
has domain
material entityc
has range
material entityc

bounding layer ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002007

A relationship that applies between a continuant and its outer, bounding layer. Examples include the relationship between a multicellular organism and its integument, between an animal cell and its plasma membrane, and between a membrane bound organelle and its outer/bounding membrane.
has super-properties
part ofop
has domain
material entityc and (has characteristicop some laminarc)
has range
material entityc

bounds sequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002522

has characteristics : transitive

has super-properties
sequentially related toop
has sub-properties
has subsequenceop
is inverse of
is bound by sequence ofop

branching part ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002380

has super-properties
part ofop
in branching relationship withop
has range
has characteristicop some branchedc
is inverse of
has branching partop
has sub-property chains
distributary ofop o main stem ofop

capable ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002215

has super-properties
capable of part ofop
has sub-properties
enablesop
has domain
independent continuantc
has range
processc

capable of inhibiting or preventing pathological processop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002599

has super-properties
capable of negatively regulatingop
has sub-properties
is substance that treatsop

capable of negatively regulatingop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002597

has super-properties
capable of regulatingop
has sub-properties
capable of inhibiting or preventing pathological processop, is small molecule inhibitor ofop
has sub-property chains
capable ofop o negatively regulatesop

capable of part ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002216

has super-properties
functionally related toop
causal agent in processop
has sub-properties
capable ofop, contributes toop
has sub-property chains
capable ofop o part ofop

capable of positively regulatingop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002598

has super-properties
capable of regulatingop
has sub-properties
capable of upregulating or causing pathological processop, is small molecule activator ofop
has sub-property chains
capable ofop o positively regulatesop

capable of regulatingop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002596

has super-properties
causal agent in processop
has sub-properties
capable of negatively regulatingop, capable of positively regulatingop, is small molecule regulator ofop
has sub-property chains
capable ofop o regulatesop

capable of upregulating or causing pathological processop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002600

has super-properties
capable of positively regulatingop

causal agent in processop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002500

has super-properties
causal relation between material entity and a processop
has sub-properties
acts upstream of or withinop, capable of part ofop, capable of regulatingop, involved in or involved in regulation ofop
is inverse of
process has causal agentop

causal relation between entitiesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002506

has super-properties
causally related toop
has sub-properties
causally influenced byop, causally influencesop, determined by part ofop
has domain
continuantc
has range
continuantc

causal relation between material entity and a processop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002595

has super-properties
causally related toop
has sub-properties
causal agent in processop, has part structure that is capable ofop
has domain
material entityc
has range
processc

causal relation between processesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002501

has super-properties
causally related toop
has sub-properties
causally downstream of or withinop, causally upstream of or withinop
has domain
occurrentc
has range
occurrentc

causal relationship with disease as subjectop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004023

has super-properties
causally related toop
disease relationshipop
has sub-properties
disease causes disruption ofop, disease causes dysfunction ofop, disease has basis inop
has domain
diseasec

causally downstream ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002404

has super-properties
preceded byop
causally downstream of or withinop
has sub-properties
immediately causally downstream ofop
is inverse of
causally upstream ofop

causally downstream of or withinop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002427

has characteristics : transitive

has super-properties
causal relation between processesop
has sub-properties
causally downstream ofop, regulated byop
is inverse of
causally upstream of or withinop

causally influenced byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002559

has super-properties
causal relation between entitiesop
has sub-properties
determined byop
is inverse of
causally influencesop

causally influencesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002566

has super-properties
causal relation between entitiesop
has sub-properties
determinesop, regulates activity ofop, regulates quantity ofop
has domain
continuantc
has range
continuantc
is inverse of
causally influenced byop
has sub-property chains
enablesop o causally upstream ofop o has inputop
enablesop o causally upstream ofop o enabled byop

causally related toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002410

has sub-properties
causal relation between entitiesop, causal relation between material entity and a processop, causal relation between processesop, causal relationship with disease as subjectop, causes or contributes to conditionop, condition ameliorated byop, condition exacerbated byop, condition has genetic basis inop, is basis for realizableop, is treated by substanceop, process has causal agentop, realizable has basis inop, realized in response toop, realized in response to stimulusop, regulates characteristicop, related via exposure toop

causally upstream ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002411

has characteristics : transitive

has super-properties
precedesop
causally upstream of or withinop
has sub-properties
causally upstream of, negative effectop, causally upstream of, positive effectop, immediately causally upstream ofop, indirectly causally upstream ofop, regulatesop
is inverse of
causally downstream ofop

causally upstream of or withinop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002418

has characteristics : transitive

has super-properties
causal relation between processesop
has sub-properties
causally upstream ofop, causally upstream of or within, negative effectop, causally upstream of or within, positive effectop, occurrent part ofop, regulates in another organismop
is inverse of
causally downstream of or withinop

causally upstream of or within, negative effectop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004046

has super-properties
causally upstream of or withinop
has sub-properties
causally upstream of, negative effectop

causally upstream of or within, positive effectop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004047

has super-properties
causally upstream of or withinop
has sub-properties
causally upstream of, positive effectop, transitively provides input forop

causally upstream of, negative effectop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002305

has super-properties
causally upstream ofop
causally upstream of or within, negative effectop
has sub-properties
negatively regulatesop, removes input forop

causally upstream of, positive effectop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002304

holds between x and y if and only if x is causally upstream of y and the progression of x increases the frequency, rate or extent of y
has super-properties
causally upstream ofop
causally upstream of or within, positive effectop
has sub-properties
constitutively upstream ofop, positively regulatesop

causes conditionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003303

has super-properties
causes or contributes to conditionop
has sub-properties
is causal germline mutation inop, is causal somatic mutation inop

causes or contributes to conditionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003302

Genetic variations can span any level of granularity from a full genome or genotype to an individual gene or sequence alteration. These variations can be represented at the physical level (DNA/RNA macromolecules or their parts, as in the ChEBI ontology and Molecular Sequence Ontology) or at the abstract level (generically dependent continuant sequence features that are carried by these macromolecules, as in the Sequence Ontology and Genotype Ontology). The causal relations in this hierarchy can be used in linking either physical or abstract genetic variations to phenotypes or diseases they cause or contribute to. Environmental exposures include those imposed by natural environments, experimentally applied conditions, or clinical interventions.
has super-properties
causally related toop
has sub-properties
causes conditionop, contributes to conditionop, has allergic triggerop, has autoimmune triggerop, is allergic trigger forop, is autoimmune trigger forop

cell expressesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002009

has super-properties
expressesop
has domain
cellc

characteristic measured by assayop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009007

has domain
characteristicc
has range
assayc
is inverse of
assay measures characteristicop

characteristic ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000052

Note that this relation was previously called "inheres in", but was changed to be called "characteristic of" because BFO2 uses "inheres in" in a more restricted fashion. This relation differs from BFO2:inheres_in in two respects: (1) it does not impose a range constraint, and thus it allows qualities of processes, as well as of information entities, whereas BFO2 restricts inheres_in to only apply to independent continuants (2) it is declared functional, i.e. something can only be a characteristic of one thing.

has characteristics : functional

has super-properties
characteristic of part ofop
has sub-properties
disposition ofop, function ofop, quality ofop, role ofop
is inverse of
has characteristicop

characteristic of part ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002314

has super-properties
depends onop
has sub-properties
characteristic ofop
has sub-property chains
characteristic ofop o part ofop
characteristic of part ofop o part ofop

chemical relationshipop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018030

has sub-properties
has functional parentop, has parent hydrideop, is deprotonated form ofop, is enantiomer ofop, is matched small molecular pair withop, is protonated form ofop, is substitutent group fromop, is tautomer ofop

child nucleus ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002476

has super-properties
developmentally preceded byop
has sub-properties
child nucleus of in hermaphroditeop, child nucleus of in maleop
has domain
cell nucleusc
has range
cell nucleusc

child nucleus of in hermaphroditeop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002477

has super-properties
child nucleus ofop

child nucleus of in maleop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002478

has super-properties
child nucleus ofop

co-roosts withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002801

has characteristics : symmetric

has super-properties
ecologically co-occurs withop

coincident withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002008

Example: if we define region of chromosome as any subdivision of a chromosome along its long axis, then we can define a region of chromosome that contains only gene x as 'chromosome region' that coincident_with some 'gene x', where the term gene X corresponds to a genomic sequence.
has super-properties
mereotopologically related toop
has domain
continuantc and (has characteristicop some linearc)
has range
continuantc and (has characteristicop some linearc)

colocalizes withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002325

has super-properties
mereotopologically related toop
has domain
material entityc
has range
material entityc

commensually interacts withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002441

has super-properties
symbiotically interacts withop
has sub-property chains
partner inop o is commensalismop o

composed primarily ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002473

has super-properties
has partop
has domain
material entityc
has range
material entityc

concretizesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000059

has domain
characteristicc
has range
generically dependent continuantc
is inverse of
is concretized asop

condition ameliorated byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003310

has super-properties
causally related toop

condition exacerbated byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003311

has super-properties
causally related toop

condition has genetic basis inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004000

has super-properties
causally related toop
has sub-properties
has major susceptibility factorop, has material basis in gain of function germline mutation inop, has material basis in germline mutation inop, has material basis in loss of function germline mutation inop, has material basis in somatic mutation inop, has partial material basis in germline mutation inop
has domain
realizablec
has range
processc or qualityc or material entityc
is inverse of
is genetic basis for conditionop

conduit forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002570

has super-properties
overlapsop
has domain
material entityc
has range
material entityc

confers advantage inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002322

has super-properties
ecologically related toop
has range
environmental systemc

confers susceptibility to conditionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0019501

has super-properties
contributes to conditionop

connected toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002170

has super-properties
mereotopologically related toop
has sub-properties
attached toop, connecting branch ofop, distributary ofop, drainsop, electrically_synapsed_toop, receives input fromop, sends output toop, suppliesop, tributary ofop
has domain
part ofop some systemc
has range
part ofop some systemc
has sub-property chains
o connectsop

connecting branch ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002252

has super-properties
connected toop
in branching relationship withop
is inverse of
has connecting branchop

connectsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002176

has super-properties
mereotopologically related toop
has domain
independent continuantc
has range
part ofop some systemc

constitutively upstream ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012009

has super-properties
causally upstream of, positive effectop

contains measured amountop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0017005

has domain
containerc
has range
measurement datumc

contains processop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000067

is defined by
http://purl.obolibrary.org/obo/bfo.owl
Paraphrase of definition: a relation between an independent continuant and a process, in which the process takes place entirely within the independent continuant
is inverse of
occurs inop

continuous withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002150

has characteristics : symmetric

has super-properties
mereotopologically related toop
has domain
independent continuantc
has range
independent continuantc

contributes toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002326

has super-properties
capable of part ofop
part of structure that is capable ofop

contributes to conditionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003304

has super-properties
causes or contributes to conditionop
has sub-properties
confers susceptibility to conditionop, contributes to frequency of conditionop, contributes to severity of conditionop, is causal germline mutation partially giving rise toop

contributes to frequency of conditionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003306

has super-properties
contributes to conditionop

contributes to morphology ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002433

has super-properties
overlapsop

contributes to severity of conditionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003305

has super-properties
contributes to conditionop
has sub-properties
ameliorates conditionop, exacerbates conditionop

correlated withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002610

has sub-properties
correlated with conditionop, is marker forop, negatively correlated withop, positively correlated withop

correlated with conditionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003308

has super-properties
correlated withop

creates habitat forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008505

has super-properties
ecologically related toop
has domain
organismc
has range
organismc

decreased in magnitude relative toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015008

This relation is used to determine the 'directionality' of relative qualities such as 'decreased strength', relative to the parent type, 'strength'.
has super-properties
different in magnitude relative toop
has domain
qualityc
has range
qualityc

decreases by repression quantity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011007

has super-properties
indirectly negatively regulates quantity ofop
has domain
material entityc
has range
material entityc

dendrite synapsed inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002121

has super-properties
has postsynaptic terminal inop
has domain
neuronc
has sub-property chains
dendrite synapsed inop o part ofop

depends onop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002502

has sub-properties
characteristic of part ofop, towardsop

DEPRECATED bearer ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004097

DEPRECATED inheres inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004096

DEPRECATED This relation is similar to but different in important respects to the characteristic-of relation. See comments on that relation for more information.

derived by descent fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002156

has characteristics : transitive

has super-properties
evolutionarily related toop
has sub-properties
derived from ancestral fusion ofop
is inverse of
has derived by descendantop

derived from ancestral fusion ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002374

A has_fused_element B does not imply that A has_part some B: rather than A has_part some B', where B' that has some evolutionary relationship to B.
has super-properties
derived by descent fromop

derives fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001000

is inverse of
derives intoop

derives from part ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/ENVO_01003004

derives intoop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001001

is inverse of
derives fromop

destabilizes quantity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011014

has super-properties
directly negatively regulates quantity ofop
has domain
material entityc
has range
material entityc

determined byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002507

has super-properties
part ofop
determined by part ofop
causally influenced byop
has domain
systemc
has range
material entityc
is inverse of
determinesop

determined by part ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002509

has super-properties
overlapsop
causal relation between entitiesop
has sub-properties
determined byop
has domain
systemc
has range
material entityc
has sub-property chains
determined byop o part ofop

determinesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002508

has super-properties
causally influencesop
is inverse of
determined byop

developmentally contributes toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002255

has super-properties
developmentally succeeded byop
has potential to developmentally contribute toop
is inverse of
has developmental contribution fromop
has sub-property chains
develops intoop o part ofop

developmentally induced byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002256

has super-properties
developmentally preceded byop
has domain
material anatomical entityc
has range
material anatomical entityc
is inverse of
developmentally inducesop

developmentally inducesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002257

has super-properties
developmentally succeeded byop
has potential to developmentally induceop
is inverse of
developmentally induced byop

developmentally preceded byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002258

This relation groups together various other developmental relations. It is fairly generic, encompassing induction, developmental contribution and direct and transitive develops from
has super-properties
developmentally related toop
has sub-properties
child nucleus ofop, developmentally induced byop, developmentally replacesop, develops fromop, develops inop, has developmental contribution fromop
has domain
continuantc
has range
continuantc
is inverse of
developmentally succeeded byop

developmentally related toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002324

has sub-properties
developmentally preceded byop, has developmental potential involvingop, results in developmental progression ofop

developmentally replacesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002285

has super-properties
developmentally preceded byop

developmentally succeeded byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002286

has super-properties
has developmental potential involvingop
has sub-properties
developmentally contributes toop, developmentally inducesop, develops intoop, part of developmental precursor ofop
is inverse of
developmentally preceded byop

develops fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002202

This is the transitive form of the develops from relation

has characteristics : transitive

has super-properties
has developmental contribution fromop
developmentally preceded byop
has sub-properties
develops from part ofop, directly develops fromop, transformation ofop
has domain
independent continuantc
has range
independent continuantc
is inverse of
develops intoop

develops from part ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002225

has super-properties
develops fromop
has sub-property chains
directly develops fromop o part ofop

develops inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002226

has super-properties
developmentally preceded byop
has domain
anatomical entityc
has sub-property chains
directly develops fromop o located inop

develops intoop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002203

has characteristics : transitive

has super-properties
developmentally succeeded byop
has potential to develop intoop
has potential to directly develop intoop
has sub-properties
directly develops intoop
is inverse of
develops fromop

device utilizes materialop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0017001

has sub-property chains
capable ofop o has inputop

different in magnitude relative toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015006

has sub-properties
decreased in magnitude relative toop, increased in magnitude relative toop
has domain
qualityc
has range
qualityc

differs inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002424

This is an exploratory relation
has sub-properties
differs in attributeop, differs in attribute ofop

differs in attributeop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002426

has super-properties
differs inop
has range
characteristicc

differs in attribute ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002425

has super-properties
differs inop
has range
independent continuantc or processc

directly develops fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002207

TODO - add child relations from DOS
has super-properties
develops fromop
has sub-properties
immediate transformation ofop
has domain
cellc or multicellular anatomical structurec
has range
cellc or multicellular anatomical structurec
is inverse of
directly develops intoop

directly develops intoop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002210

has super-properties
develops intoop
is inverse of
directly develops fromop

directly negatively regulated byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002023

has super-properties
directly regulated byop
is inverse of
directly negatively regulatesop

directly negatively regulatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002630

has super-properties
negatively regulatesop
directly regulatesop
is inverse of
directly negatively regulated byop

directly negatively regulates activity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002449

has super-properties
directly regulates activity ofop
has sub-properties
is antagonist ofop, is inverse agonist ofop, represses expression ofop
has domain
material entityc
has range
material entityc
has sub-property chains
enablesop o directly negatively regulatesop o enabled byop

directly negatively regulates quantity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011010

has super-properties
directly regulates quantity ofop
has sub-properties
destabilizes quantity ofop
has domain
material entityc
has range
material entityc

directly positively regulated byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002024

has super-properties
directly regulated byop
is inverse of
directly positively regulatesop

directly positively regulatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002629

has super-properties
positively regulatesop
directly regulatesop
is inverse of
directly positively regulated byop

directly positively regulates activity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002450

has super-properties
directly regulates activity ofop
has sub-properties
increases expression ofop, is agonist ofop
has domain
material entityc
has range
material entityc
has sub-property chains
enablesop o directly positively regulatesop o enabled byop

directly positively regulates quantity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011009

has super-properties
directly regulates quantity ofop
has sub-properties
stabilizes quantity ofop
has domain
material entityc
has range
material entityc

directly regulated byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002022

Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2.
has super-properties
regulated byop
has sub-properties
directly negatively regulated byop, directly positively regulated byop
is inverse of
directly regulatesop

directly regulatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002578

has super-properties
regulatesop
immediately causally upstream ofop
has sub-properties
directly negatively regulatesop, directly positively regulatesop
is inverse of
directly regulated byop

directly regulates activity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002448

has super-properties
molecularly interacts withop
regulates activity ofop
has sub-properties
directly negatively regulates activity ofop, directly positively regulates activity ofop
has domain
material entityc
has range
material entityc
has sub-property chains
enablesop o regulatesop o enabled byop

directly regulates quantity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011021

has super-properties
regulates quantity ofop
has sub-properties
directly negatively regulates quantity ofop, directly positively regulates quantity ofop

directly supplies and drainsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0020103

has super-properties
suppliesop
drainsop
has domain
capillaryc
has range
anatomical structurec

disease arises from alteration in structureop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004030

has super-properties
disease has basis inop
has range
anatomical structurec

disease causes disruption ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004024

has super-properties
causal relationship with disease as subjectop
has domain
diseasec
has range
processc
has sub-property chains
disease causes disruption ofop o part ofop
disease causes dysfunction ofop o capable ofop

disease causes dysfunction ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004025

has super-properties
causal relationship with disease as subjectop
has domain
diseasec
has range
material anatomical entityc
has sub-property chains
disease causes dysfunction ofop o part ofop

disease has basis inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004019

has super-properties
realizable has basis inop
causal relationship with disease as subjectop
has sub-properties
disease arises from alteration in structureop, disease has basis in disruption ofop, disease has basis in dysfunction ofop, disease has basis in featureop, disease has infectious agentop
has domain
diseasec

disease has basis in disruption ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004021

has super-properties
disease has basis inop
has range
processc

disease has basis in dysfunction ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004020

has super-properties
disease has basis inop
has range
material anatomical entityc

disease has basis in featureop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004022

has super-properties
has phenotypeop
disease has basis inop
has domain
diseasec
has range
diseasec or phenotypec

disease has featureop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004029

has super-properties
disease relationshipop
has domain
diseasec
has range
diseasec or phenotypec

disease has infectious agentop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0014001

has super-properties
disease has basis inop

disease has inflammation siteop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004027

has super-properties
disease has locationop
has domain
diseasec
has range
independent continuantc
material anatomical entityc or immaterial anatomical entityc

disease has locationop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004026

has super-properties
disease relationshipop
has sub-properties
disease has inflammation siteop
has domain
diseasec
has range
independent continuantc
material anatomical entityc or immaterial anatomical entityc

disease relationshipop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0040035

has sub-properties
causal relationship with disease as subjectop, disease has featureop, disease has locationop

disposition ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000092

This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.
has super-properties
characteristic ofop
is inverse of
has dispositionop

distributary ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002377

This is both a mereotopological relationship and a relationship defined in connection to processes. It concerns both the connecting structure, and how this structure is disposed to causally affect flow processes
has super-properties
connected toop
in branching relationship withop
has sub-properties
anabranch ofop, proper distributary ofop

does not overlap sequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002527

has characteristics : symmetric

has super-properties
sequentially related toop
has sub-properties
is downstream of sequence ofop, is upstream of sequence ofop, sequentially adjacent toop

drainsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002179

has super-properties
connected toop
has sub-properties
directly supplies and drainsop, vessel drains blood fromop

during which endsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002084

Previously had ID http://purl.obolibrary.org/obo/RO_0002122 in test files in sandpit - but this seems to have been dropped from ro-edit.owl at some point. No re-use under this ID AFAIK, but leaving note here in case we run in to clashes down the line. Official ID now chosen from DOS ID range.
has super-properties
temporally related toop
is inverse of
ends duringop

during which startsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002088

Previously had ID http://purl.obolibrary.org/obo/RO_0002123 in test files in sandpit - but this seems to have been dropped from ro-edit.owl at some point. No re-use under this ID AFAIK, but leaving note here in case we run in to clashes down the line. Official ID now chosen from DOS ID range.
has super-properties
temporally related toop
has sub-properties
encompassesop
is inverse of
starts duringop

eatsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002470

has super-properties
biotically interacts withop

ecologically co-occurs withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008506

has characteristics : symmetric

has super-properties
ecologically related toop
has sub-properties
co-roosts withop
has domain
organismc
has range
organismc

ecologically related toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002321

has sub-properties
biotically interacts withop, confers advantage inop, creates habitat forop, ecologically co-occurs withop, has habitatop, transmitted byop

ectoparasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002632

has super-properties
parasite ofop
is inverse of
has ectoparasiteop

electrically_synapsed_toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002003

has super-properties
connected toop

enabled byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002333

has super-properties
has participantop
functionally related toop
is inverse of
enablesop

enablesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002327

has super-properties
capable ofop
is inverse of
enabled byop
has sub-property chains
enablesop o has partop
enablesop o has component activityop

enables subfunctionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004031

has super-properties
functionally related toop
has sub-property chains
enablesop o has partop

encompassesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002085

Previously had ID http://purl.obolibrary.org/obo/RO_0002124 in test files in sandpit - but this seems to have been dropped from ro-edit.owl at some point. No re-use under this ID AFAIK, but leaving note here in case we run in to clashes down the line. Official ID now chosen from DOS ID range.

has characteristics : transitive

has super-properties
during which startsop
is inverse of
happens duringop

endoparasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002634

has super-properties
parasite ofop
has sub-properties
intercellular endoparasite ofop, intracellular endoparasite ofop
is inverse of
has endoparasiteop

endsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002229

has super-properties
part ofop
temporally related toop
is inverse of
ends withop

ends afterop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002086

X ends_after Y iff: end(Y) before_or_simultaneous_with end(X)

has characteristics : transitive

has super-properties
temporally related toop
has sub-properties
preceded byop
has sub-property chains
ends duringop o preceded byop

ends duringop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002093

X ends_during Y iff: ((start(Y) before_or_simultaneous_with end(X)) AND end(X) before_or_simultaneous_with end(Y).
has super-properties
temporally related toop
has sub-properties
happens duringop
is inverse of
during which endsop

ends withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002230

has characteristics : transitive

has super-properties
has partop
temporally related toop
is inverse of
endsop

epiphyte ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008501

has super-properties
symbiotically interacts withop
is inverse of
has epiphyteop

evolutionarily related toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002320

has sub-properties
derived by descent fromop, evolutionary variant ofop, has derived by descendantop, in homocracy relationship withop, in taxonop, serially homologous toop, shares ancestor withop

evolutionary variant ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002312

has super-properties
evolutionarily related toop

exacerbates conditionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003309

has super-properties
contributes to severity of conditionop

exemplar data ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015002

has super-properties
top object property
is inverse of
has exemplar dataop

existence ends at start ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002593

has super-properties
existence ends during or beforeop

existence ends duringop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002492

The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription.
has super-properties
existence overlapsop
existence ends during or beforeop
has sub-properties
existence ends withop, existence starts and ends duringop
has sub-property chains
existence ends duringop o part ofop
existence ends at start ofop o part ofop

existence ends during or beforeop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002497

The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription.
has super-properties
relation between physical entity and a process or stageop
has sub-properties
existence ends at start ofop, existence ends duringop
has sub-property chains
part ofop o existence ends during or beforeop
developmentally succeeded byop o existence ends during or beforeop
existence ends during or beforeop o part ofop
existence ends during or beforeop o precedesop
existence ends during or beforeop o simultaneous withop
existence ends at start ofop o precedesop o

existence ends withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002493

The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription.
has super-properties
existence ends duringop

existence overlapsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002490

The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription.
has super-properties
relation between physical entity and a process or stageop
has sub-properties
existence ends duringop, existence starts duringop

existence starts and ends duringop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002491

The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription.
has super-properties
existence starts duringop
existence ends duringop

existence starts at end ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002583

has super-properties
existence starts during or afterop

existence starts duringop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002488

has super-properties
existence overlapsop
existence starts during or afterop
has sub-properties
existence starts and ends duringop, existence starts withop
has sub-property chains
existence starts duringop o part ofop
existence starts at end ofop o part ofop

existence starts during or afterop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002496

The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription.
has super-properties
relation between physical entity and a process or stageop
has sub-properties
existence starts at end ofop, existence starts duringop
has sub-property chains
part ofop o existence starts during or afterop
developmentally preceded byop o existence starts during or afterop
existence starts during or afterop o part ofop
existence starts during or afterop o preceded byop
existence starts during or afterop o simultaneous withop
existence starts at end ofop o preceded byop o

existence starts withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002489

has super-properties
existence starts duringop

exportsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002345

has super-properties
transportsop

expressed inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002206

has super-properties
genomically related toop
has sub-properties
over-expressed inop, ubiquitously expressed inop, under-expressed inop
has domain
continuantc
generically dependent continuantc or material entityc
has range
material anatomical entityc
is inverse of
expressesop
has sub-property chains
expressed inop o part ofop

expressesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002292

has super-properties
genomically related toop
has sub-properties
cell expressesop, ubiquitously expressesop
is inverse of
expressed inop

facultative parasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002228

has super-properties
parasite ofop

fasciculates withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002101

has super-properties
overlapsop
has domain
neuronc
has range
neuron projection bundlec
is inverse of
has fasciculating neuron projectionop

formed as result ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002354

has super-properties
output ofop
is inverse of
results in formation of anatomical entityop

function ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000079

This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.
has super-properties
characteristic ofop
has domain
functionc
is inverse of
has functionop

functionally related toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002328

has sub-properties
biomechanically related toop, capable of part ofop, enabled byop, enables subfunctionop, has part structure that is capable ofop, input ofop, involved in or involved in regulation ofop, is active inop, output ofop, part of structure that is capable ofop, regulates levels ofop

gene product ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002204

has super-properties
genomically related toop
has domain
independent continuantc
generically dependent continuantc or material entityc
has range
continuantc
generically dependent continuantc or material entityc
is inverse of
has gene productop
has sub-property chains
ribosomal translation ofop o transcribed fromop

generically depends onop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0010001

has domain
generically dependent continuantc
has range
independent continuantc
is inverse of
is carrier ofop
has sub-property chains
characteristic ofop o is concretized asop

genetically interacts withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002435

has characteristics : symmetric

has super-properties
interacts withop

genomically related toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002330

has sub-properties
expressed inop, expressesop, gene product ofop, has gene productop, ribosomal translation ofop, ribosomally translates toop, transcribed fromop, transcribed toop
has domain
continuantc
has range
continuantc

happens duringop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002092

X happens_during Y iff: (start(Y) before_or_simultaneous_with start(X)) AND (end(X) before_or_simultaneous_with end(Y))

has characteristics : transitive

has super-properties
starts duringop
ends duringop
is inverse of
encompassesop

has 2D boundaryop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002002

has super-properties
mereotopologically related toop
has domain
material entityc
has range
immaterial entityc
is inverse of
2D boundary ofop

has active ingredientop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002248

has super-properties
has partop
has domain
material entityc
has range
material entityc
is inverse of
active ingredient inop

has allergic triggerop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001022

has super-properties
causes or contributes to conditionop
has range
material entityc
is inverse of
is allergic trigger forop

has application roleop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002261

has super-properties
has roleop

has autoimmune triggerop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001023

has super-properties
causes or contributes to conditionop
has range
material entityc
is inverse of
is autoimmune trigger forop

has biological roleop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002260

has super-properties
has roleop

has branching partop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002569

has characteristics : transitive

has super-properties
has partop
in branching relationship withop
is inverse of
branching part ofop

has characteristicop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000053

has characteristics : inverse functional

has sub-properties
has dispositionop, has functionop, has qualityop, has roleop
has range
characteristicc
is inverse of
characteristic ofop

has characterizing marker setop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015004

has domain
cellc

has chemical roleop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002262

has super-properties
has roleop

has componentop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002180

has super-properties
has partop
has sub-properties
has component processop

has component activityop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002017

A 'has component activity' B if A is A and B are molecular functions (GO_0003674) and A has_component B.
has super-properties
has component processop
has sub-properties
has effector activityop, has necessary component activityop, has regulatory component activityop

has component participantop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002238

has super-properties
has participantop

has component processop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002018

has super-properties
has componentop
has sub-properties
has component activityop
has domain
processc
has range
processc

has connecting branchop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002253

has super-properties
in branching relationship withop
is inverse of
connecting branch ofop

has consumerop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009004

has domain
material entityc
has range
organismc

has cross sectionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015011

Example: a spherical object has the quality of being spherical, and the spherical quality has_cross_section round.

has dendrite locationop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002360

has super-properties
overlapsop
has sub-properties
has sensory dendrite inop

has denominatorop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0020203

has super-properties
has partop
has domain
proportionality toc
has range
qualityc

has derived by descendantop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002157

has characteristics : transitive

has super-properties
evolutionarily related toop
is inverse of
derived by descent fromop

has developmental contribution fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002254

has super-properties
developmentally preceded byop
has sub-properties
develops fromop
has domain
anatomical entityc
has range
anatomical entityc
is inverse of
developmentally contributes toop
has sub-property chains
has partop o develops fromop

has developmental potential involvingop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002384

has super-properties
developmentally related toop
has sub-properties
developmentally succeeded byop, has potential to develop intoop, has potential to developmentally contribute toop, has potential to developmentally induceop
has domain
anatomical entityc
has range
anatomical entityc

has direct inputop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002400

has super-properties
has inputop
has sub-property chains
starts withop o has direct inputop

has diseaseop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0016002

has super-properties
has phenotype or diseaseop

has disease driverop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0007001

has super-properties
has driverop

has dispositionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000091

has super-properties
has characteristicop
has domain
independent continuantc
has range
dispositionc
is inverse of
disposition ofop

has driverop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0007000

has sub-properties
has disease driverop

has ectoparasiteop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002633

has super-properties
parasitized byop
is inverse of
ectoparasite ofop

has effector activityop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002025

This relation is designed for constructing compound molecular functions, typically in combination with one or more regulatory component activity relations.

has characteristics : functional

has super-properties
has component activityop

has eggs laid in byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002625

has super-properties
parasitized byop
visited byop
is inverse of
lays eggs inop

has eggs laid on byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008508

has super-properties
visited byop
is inverse of
lays eggs onop

has end locationop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002232

has super-properties
has part that occurs inop
has domain
processc
has range
independent continuantc
has sub-property chains
ends withop o occurs inop

has end sequenceop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002518

has characteristics : transitive

has super-properties
has subsequenceop
is inverse of
is end sequence ofop

has endoparasiteop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002635

has super-properties
parasitized byop
has sub-properties
has intercellular endoparasiteop, has intracellular endoparasiteop
is inverse of
endoparasite ofop

has epiphyteop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008502

has super-properties
symbiotically interacts withop
is inverse of
epiphyte ofop

has evidenceop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002558

x has evidence y iff , x is an information content entity, material entity or process, and y supports either the existence of x, or the truth value of x.
has super-properties
related via evidence or inference toop
is inverse of
is evidence forop

has exemplar dataop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015001

has super-properties
top object property
is inverse of
exemplar data ofop
has sub-property chains
has exemplar dataop o subcluster ofop

has exposure mediumop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0016004

has super-properties
related via exposure toop

has exposure receptorop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002240

has super-properties
related via exposure toop

has exposure routeop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002242

has super-properties
related via exposure toop

has exposure stimulusop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002309

has super-properties
related via exposure toop
has sub-properties
has exposure stressorop

has exposure stressorop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002241

has super-properties
has exposure stimulusop

has exposure transport pathop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002243

has super-properties
related via exposure toop

has fasciculating neuron projectionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002132

has super-properties
overlapsop
has domain
neuron projection bundlec
has range
neuronc or (part ofop some neuronc)
is inverse of
fasciculates withop

has flowers visited byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002623

has super-properties
visited byop
is inverse of
visits flowers ofop

has functionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000085

has super-properties
has characteristicop
has domain
independent continuantc
has range
functionc
is inverse of
function ofop

has functional parentop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018038

has super-properties
chemical relationshipop

has gene productop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002205

has super-properties
genomically related toop
has domain
continuantc
has range
independent continuantc
is inverse of
gene product ofop
has sub-property chains
transcribed toop o ribosomally translates toop

has habitatop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002303

A population of xs will possess adaptations (either evolved naturally or via artifical selection) which permit it to exist and grow in y.
has super-properties
ecologically related toop
has sub-properties
has roostop
has domain
organismc
has range
environmental systemc

has high plasma membrane amountop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015015

has super-properties
has plasma membrane partop
has domain
cellc

has hostop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002454

has super-properties
symbiotically interacts withop
has sub-properties
has reservoir hostop, hyperparasite ofop, parasite ofop, pathogen ofop

has inputop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002233

has super-properties
has participantop
has sub-properties
has direct inputop, has ligandop, has primary inputop, results in breakdown ofop, results in remodeling ofop
has domain
processc
is inverse of
input ofop
has sub-property chains
starts withop o has inputop

has intercellular endoparasiteop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002639

has super-properties
has endoparasiteop
is inverse of
intercellular endoparasite ofop

has intermediateop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002505

has super-properties
has participantop

has intracellular endoparasiteop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002641

has super-properties
has endoparasiteop
is inverse of
intracellular endoparasite ofop

has ligandop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002019

has super-properties
has inputop

has low plasma membrane amountop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015016

has super-properties
has plasma membrane partop
has domain
cellc

has major susceptibility factorop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004005

has super-properties
condition has genetic basis inop
is inverse of
is causal susceptibility factor forop

has material basis in gain of function germline mutation inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004001

has super-properties
condition has genetic basis inop
is inverse of
is causal gain of function germline mutation of inop

has material basis in germline mutation inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004003

has super-properties
condition has genetic basis inop
is inverse of
is causal germline mutation inop

has material basis in loss of function germline mutation inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004002

has super-properties
condition has genetic basis inop
is inverse of
is causal loss of function germline mutation of inop

has material basis in somatic mutation inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004004

has super-properties
condition has genetic basis inop
is inverse of
is causal somatic mutation inop

has maximum capacityop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0017006

has domain
containerc
has range
measurement datumc

has memberop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002351

has characteristics : irreflexive

has super-properties
has partop
is inverse of
member ofop

has mesoparasiteop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002637

has super-properties
parasitized byop
is inverse of
mesoparasite ofop

has modelop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002615

is inverse of
has role in modelingop

has modifierop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002573

has domain
characteristicc
has range
characteristicc

has muscle antagonistop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002568

has super-properties
biomechanically related toop

has muscle insertionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002373

has super-properties
attached toop
biomechanically related toop
has domain
anatomical structurec

has muscle originop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002372

has super-properties
attached toop
biomechanically related toop
has domain
anatomical structurec

has necessary component activityop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002016

A has necessary component activity B if A and B are GO molecular functions (GO_0003674), A has_component B and B is necessary for A. For example, ATPase coupled transporter activity has necessary component ATPase activity; transcript factor activity has necessary component DNA binding activity.
has super-properties
has component activityop
positively regulated byop

has negative regulatory component activityop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002014

By convention GO molecular functions are classified by their effector function. Internal regulatory functions are treated as components. For example, NMDA glutmate receptor activity is a cation channel activity with positive regulatory component 'glutamate binding' and negative regulatory components including 'zinc binding' and 'magnesium binding'.
has super-properties
has regulatory component activityop
negatively regulated byop

has numeratorop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0020202

has super-properties
has partop
has domain
proportionality toc
has range
qualityc

has outputop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002234

has super-properties
has participantop
has sub-properties
has primary outputop, results in formation of anatomical entityop
is inverse of
output ofop
has sub-property chains
ends withop o has outputop

has parasitoidop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002209

has super-properties
parasitized byop
is inverse of
parasitoid ofop

has parent hydrideop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018040

has super-properties
chemical relationshipop

has partop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000051

has characteristics : transitive

has super-properties
overlapsop
has sub-properties
composed primarily ofop, ends withop, has active ingredientop, has branching partop, has componentop, has denominatorop, has memberop, has numeratorop, has plasma membrane partop, has skeletonop, has subsequenceop, starts withop
is inverse of
part ofop

has part structure that is capable ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002584

has super-properties
functionally related toop
causal relation between material entity and a processop
has sub-property chains
has partop o capable ofop

has part that occurs inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002479

has sub-properties
has end locationop, has start locationop, occurs acrossop
has domain
occurrentc
has range
independent continuantc
has sub-property chains
has partop o occurs inop

has partial material basis in germline mutation inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004006

has super-properties
condition has genetic basis inop
is inverse of
is causal germline mutation partially giving rise toop

has participantop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000057

has sub-properties
acts on population ofop, enabled byop, has component participantop, has inputop, has intermediateop, has outputop, has primary input or outputop, has small molecule regulatorop, results in changes to anatomical or cellular structureop
has domain
occurrentc
has range
continuantc
is inverse of
participates inop
has sub-property chains
has partop o realizesop o characteristic ofop
has partop o has participantop

has pathogenop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002557

has super-properties
host ofop
is inverse of
pathogen ofop

has phenotypeop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002200

has super-properties
has phenotype or diseaseop
has sub-properties
disease has basis in featureop, has symptomop
has domain
generically dependent continuantc or diseasec or material anatomical entityc
has range
phenotypec
is inverse of
phenotype ofop

has phenotype or diseaseop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0016001

has sub-properties
has diseaseop, has phenotypeop

has plasma membrane partop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002104

has super-properties
has partop
has sub-properties
has high plasma membrane amountop, has low plasma membrane amountop
has domain
material anatomical entityc
has range
material anatomical entityc

has positive regulatory component activityop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002015

By convention GO molecular functions are classified by their effector function and internal regulatory functions are treated as components. So, for example calmodulin has a protein binding activity that has positive regulatory component activity calcium binding activity. Receptor tyrosine kinase activity is a tyrosine kinase activity that has positive regulatory component 'ligand binding'.
has super-properties
has regulatory component activityop
positively regulated byop

has postsynaptic terminal inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002110

has super-properties
has synaptic terminal inop
has sub-properties
dendrite synapsed inop, receives synaptic input in regionop
has domain
neuronc
is inverse of
has presynaptic terminal inop
has sub-property chains
has postsynaptic terminal inop o part ofop

has potential to develop intoop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002387

has super-properties
has developmental potential involvingop
has sub-properties
develops intoop, has potential to directly develop intoop

has potential to developmentally contribute toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002385

has super-properties
has developmental potential involvingop
has sub-properties
developmentally contributes toop

has potential to developmentally induceop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002386

has super-properties
has developmental potential involvingop
has sub-properties
developmentally inducesop

has potential to directly develop intoop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002388

has super-properties
has potential to develop intoop
has sub-properties
develops intoop

has presynaptic terminal inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002113

has super-properties
has synaptic terminal inop
has sub-properties
axon synapses inop, sends synaptic output to regionop
has domain
neuronc
is inverse of
has postsynaptic terminal inop
has sub-property chains
has presynaptic terminal inop o part ofop

has primary inputop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004009

has super-properties
has inputop
has primary input or outputop

has primary input or outputop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004007

has super-properties
has participantop
has sub-properties
has primary inputop, has primary outputop

has primary outputop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004008

has super-properties
has outputop
has primary input or outputop

has primary substance addedop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009005

has characteristics : irreflexive

has super-properties
has substance addedop

has prototypeop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002214

has domain
independent continuantc or processc

has qualityop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000086

has super-properties
has characteristicop
has range
qualityc
is inverse of
quality ofop

has regulatory component activityop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002013

has super-properties
has component activityop
regulated byop
has sub-properties
has negative regulatory component activityop, has positive regulatory component activityop

has relative magnitudeop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015010

has reservoir hostop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002803

has super-properties
has hostop
is inverse of
reservoir host ofop

has roleop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000087

has super-properties
has characteristicop
has sub-properties
has application roleop, has biological roleop, has chemical roleop
has domain
independent continuantc
has range
rolec
is inverse of
role ofop

has role in modelingop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003301

The primary use case for this relation was to link a biological model system such as a cell line or model organism to a disease it is used to investigate, in virtue of the model system exhibiting features similar to that of the disease of interest. But the relation is defined more broadly to support other use cases, such as linking genes in which alterations are made to create model systems to the condition the system is used to interrogate, or computational models to real-world phenomena they are defined to simulate.

has characteristics : asymmetric, irreflexive

is inverse of
has modelop

has roostop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008509

A population of xs will possess adaptations (either evolved naturally or via artifical selection) which permit it to rest in y.
has super-properties
has habitatop
has domain
organismc
has range
habitatc

has sensory dendrite inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013007

has super-properties
has dendrite locationop
has domain
sensory neuronc
has sub-property chains
has sensory dendrite inop o part ofop

has skeletonop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002551

has characteristics : asymmetric, irreflexive

has super-properties
has partop
has domain
anatomical structurec
has range
material anatomical entityc
is inverse of
skeleton ofop

has small molecule activatorop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012001

has super-properties
has small molecule regulatorop
is inverse of
is small molecule activator ofop

has small molecule inhibitorop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012002

has super-properties
has small molecule regulatorop
is inverse of
is small molecule inhibitor ofop

has small molecule regulatorop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012000

has super-properties
has participantop
has sub-properties
has small molecule activatorop, has small molecule inhibitorop
is inverse of
is small molecule regulator ofop

has soma locationop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002100

has super-properties
overlapsop
has domain
neuronc
has range
material anatomical entityc
has sub-property chains
has soma locationop o part ofop

has start locationop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002231

has super-properties
has part that occurs inop
has domain
processc
has range
independent continuantc
has sub-property chains
starts withop o occurs inop

has start sequenceop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002516

has characteristics : transitive

has super-properties
has subsequenceop
is inverse of
is start sequence ofop

has subsequenceop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002524

has characteristics : transitive

has super-properties
has partop
bounds sequence ofop
overlaps sequence ofop
has sub-properties
has end sequenceop, has start sequenceop, is consecutive sequence ofop
is inverse of
is subsequence ofop

has substance addedop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009001

has characteristics : irreflexive

has sub-properties
has primary substance addedop
has domain
material entityc
has range
material entityc

has substance removedop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009002

has characteristics : irreflexive

has domain
material entityc
has range
material entityc

has symptomop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002452

has super-properties
has phenotypeop
has domain
diseasec

has synaptic IO in regionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013001

has super-properties
has synaptic terminal inop
has sub-properties
has synaptic IO throughoutop, receives synaptic input in regionop, sends synaptic output to regionop
has sub-property chains
has synaptic IO in regionop o part ofop

has synaptic IO throughoutop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013004

has super-properties
has synaptic IO in regionop
has sub-properties
receives synaptic input throughoutop, sends synaptic output throughoutop

has synaptic terminal inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002130

has super-properties
overlapsop
has sub-properties
has postsynaptic terminal inop, has presynaptic terminal inop, has synaptic IO in regionop
has domain
neuronc
is inverse of
has synaptic terminal ofop
has sub-property chains
has synaptic terminal inop o part ofop

has synaptic terminal ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002006

has super-properties
overlapsop
is inverse of
has synaptic terminal inop

has target end locationop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002339

has super-properties
results in transport to from or inop
has sub-property chains
has target end locationop o part ofop

has target start locationop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002338

has super-properties
results in transport to from or inop
has sub-property chains
has target start locationop o part ofop

has vectorop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002460

has super-properties
participates in a biotic-biotic interaction withop
is inverse of
is vector forop

helper property (not for use in curation)op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002464

has sub-properties
interaction relation helper propertyop

hemiparasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002237

has super-properties
parasite ofop

host ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002453

has super-properties
symbiotically interacts withop
has sub-properties
has pathogenop, hyperparasitized byop, parasitized byop, reservoir host ofop

hyperparasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002553

has super-properties
has hostop
is inverse of
hyperparasitized byop
has sub-property chains
parasite ofop o parasite ofop

hyperparasitized byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002554

has super-properties
host ofop
is inverse of
hyperparasite ofop
has sub-property chains
parasitized byop o parasitized byop

immediate transformation ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002495

has super-properties
directly develops fromop
transformation ofop

immediately causally downstream ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002405

has super-properties
immediately preceded byop
causally downstream ofop
is inverse of
immediately causally upstream ofop

immediately causally upstream ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002412

has super-properties
immediately precedesop
causally upstream ofop
has sub-properties
directly regulatesop, provides input forop
is inverse of
immediately causally downstream ofop

immediately preceded byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002087

X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y)
has super-properties
preceded byop
has sub-properties
immediately causally downstream ofop
is inverse of
immediately precedesop
has sub-property chains
starts withop o ends withop

immediately precedesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002090

X immediately_precedes_Y iff: end(X) simultaneous_with start(Y)
has super-properties
precedesop
has sub-properties
immediately causally upstream ofop
is inverse of
immediately preceded byop
has sub-property chains
ends withop o starts withop

immersed inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009003

has characteristics : irreflexive

has domain
material entityc
has range
material entityc

importsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002340

has super-properties
transportsop

in 1 to 1 homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000019

has characteristics : symmetric

has super-properties
in historical homology relationship withop
has sub-properties
in 1 to 1 orthology relationship withop, in apparent orthology relationship withop

in 1 to 1 orthology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000020

has characteristics : symmetric

has super-properties
in orthology relationship withop
in 1 to 1 homology relationship withop

in 1 to many homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000037

has characteristics : symmetric

has super-properties
in historical homology relationship withop
has sub-properties
in 1 to many orthology relationship withop

in 1 to many orthology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000034

has characteristics : symmetric

has super-properties
in orthology relationship withop
in 1 to many homology relationship withop
has sub-properties
in pro-orthology relationship withop, in semi-orthology relationship withop

in apomorphy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000042

has characteristics : symmetric

has super-properties
in historical homology relationship withop

in apparent orthology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000060

The genes are actually paralogs but appear to be orthologous due to differential, lineage-specific gene loss.

has characteristics : symmetric

has super-properties
in 1 to 1 homology relationship withop
in between-species paralogy relationship withop

in between-species paralogy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000050

The genes have diverged before a speciation event.

has characteristics : symmetric

has super-properties
in paralogy relationship withop
has sub-properties
in apparent orthology relationship withop

in biological homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000008

Applicable only to morphology. A certain degree of ambiguity is accepted between biological homology and parallelism.

has characteristics : symmetric

has super-properties
in homology relationship withop
has sub-properties
in heterochronous homology relationship withop, in homeosis relationship withop, in iterative homology relationship withop

in branching relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002375

has super-properties
mereotopologically related toop
has sub-properties
branching part ofop, connecting branch ofop, distributary ofop, has branching partop, has connecting branchop, main stem ofop, tributary ofop
has domain
material entityc
has range
material entityc

in chromosomal homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000047

has characteristics : symmetric

has super-properties
in historical homology relationship withop
has sub-properties
in gametology relationship withop

in convergence relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000004

Convergence usually implies a notion of adaptation.

has characteristics : symmetric

has super-properties
in homoplasy relationship withop
has sub-properties
in mimicry relationship withop

in deep homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000044

Used for structures in distantly related taxa.

has characteristics : symmetric

has super-properties
in homocracy relationship withop
in parallelism relationship withop

in equivalogy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000062

This may include examples of orthology, paralogy and xenology.

has characteristics : symmetric

has super-properties
in historical homology relationship withop
in functional equivalence relationship withop
has sub-properties
in isoorthology relationship withop

in functional equivalence relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000065

has characteristics : symmetric

has super-properties
in similarity relationship withop
has sub-properties
in equivalogy relationship withop

in gametology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000046

has characteristics : symmetric

has super-properties
in chromosomal homology relationship withop

in hemiplasy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000045

has characteristics : symmetric

has super-properties
in historical homology relationship withop

in heterochronous homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000028

has characteristics : symmetric

has super-properties
in biological homology relationship withop
has sub-properties
in paedomorphorsis relationship withop, in peramorphosis relationship withop

in historical homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000007

has characteristics : symmetric

has super-properties
in homology relationship withop
has sub-properties
in 1 to 1 homology relationship withop, in 1 to many homology relationship withop, in apomorphy relationship withop, in chromosomal homology relationship withop, in equivalogy relationship withop, in hemiplasy relationship withop, in interology relationship withop, in many to many homology relationship withop, in orthology relationship withop, in paralogy relationship withop, in plesiomorphy relationship withop, in regulogy relationship withop, in xenology relationship withop

in homeosis relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000072

has characteristics : symmetric

has super-properties
in biological homology relationship withop

in homocracy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000003

Homology and homocracy are not mutually exclusive. The homology relationships of patterning genes may be unresolved and thus may include orthologues and paralogues.

has characteristics : symmetric

has super-properties
evolutionarily related toop
in similarity relationship withop
has sub-properties
in deep homology relationship withop, in paramorphism relationship withop, in syngeny relationship withop

in homoeology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000073

On a long term, it is hard to distinguish allopolyploidy from whole genome duplication.

has characteristics : symmetric

has super-properties
in ohnology relationship withop
in synology relationship withop

in homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000001

This broad definition encompasses all the working definitions proposed so far in the literature.

has characteristics : symmetric

has super-properties
shares ancestor withop
in similarity relationship withop
has sub-properties
in biological homology relationship withop, in historical homology relationship withop, in structural homology relationship withop

in homoplasy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000002

has characteristics : symmetric

has super-properties
in similarity relationship withop
has sub-properties
in convergence relationship withop, in parallelism relationship withop, in reversal relationship withop

in homotopy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000071

Theissen (2005) mentions that some authors may consider homotopy to be distinct from homology, but this is not the standard use.

has characteristics : symmetric

has super-properties
in structural homology relationship withop

in hypermorphosis relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000052

has characteristics : symmetric

has super-properties
in peramorphosis relationship withop

in in-paralogy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000023

has characteristics : symmetric

has super-properties
in paralogy relationship withop

in interology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000063

has characteristics : symmetric

has super-properties
in historical homology relationship withop

in isoorthology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000054

has characteristics : symmetric

has super-properties
in orthology relationship withop
in equivalogy relationship withop

in iterative homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000066

has characteristics : symmetric

has super-properties
in biological homology relationship withop
has sub-properties
in paramorphism relationship withop, in serial homology relationship withop

in latent homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000057

Used for structures in closely related taxa.

has characteristics : symmetric

has super-properties
in parallelism relationship withop
in syngeny relationship withop

in many to many homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000036

has characteristics : symmetric

has super-properties
in historical homology relationship withop
has sub-properties
in many to many orthology relationship withop

in many to many orthology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000048

has characteristics : symmetric

has super-properties
in orthology relationship withop
in many to many homology relationship withop

in mimicry relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000033

has characteristics : symmetric

has super-properties
in convergence relationship withop

in neoteny relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000032

has characteristics : symmetric

has super-properties
in paedomorphorsis relationship withop

in non functional homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000016

has characteristics : symmetric

has super-properties
in structural homology relationship withop

in ohnology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000022

has characteristics : symmetric

has super-properties
in paralogy relationship withop
has sub-properties
in homoeology relationship withop

in orthology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000017

The term is sometimes also used for anatomical structures.

has characteristics : symmetric

has super-properties
in historical homology relationship withop
has sub-properties
in 1 to 1 orthology relationship withop, in 1 to many orthology relationship withop, in isoorthology relationship withop, in many to many orthology relationship withop

in out-paralogy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000024

has characteristics : symmetric

has super-properties
in paralogy relationship withop

in paedomorphorsis relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000029

has characteristics : symmetric

has super-properties
in heterochronous homology relationship withop
has sub-properties
in neoteny relationship withop, in postdisplacement relationship withop, in progenesis relationship withop

in parallelism relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000005

Can be applied for features present in closely related organisms but not present continuously in all the members of the lineage.

has characteristics : symmetric

has super-properties
in homoplasy relationship withop
has sub-properties
in deep homology relationship withop, in latent homology relationship withop

in paralogy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000011

has characteristics : symmetric

has super-properties
in historical homology relationship withop
has sub-properties
in between-species paralogy relationship withop, in in-paralogy relationship withop, in ohnology relationship withop, in out-paralogy relationship withop, in plerology relationship withop, in syntenic paralogy relationship withop, in tandem paralogy relationship withop, in within-species paralogy relationship withop

in paramorphism relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000074

has characteristics : symmetric

has super-properties
in homocracy relationship withop
in iterative homology relationship withop

in paraxenology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000068

has characteristics : symmetric

has super-properties
in xenology relationship withop

in partial homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000014

has characteristics : symmetric

has super-properties
in structural homology relationship withop

in peramorphosis relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000030

has characteristics : symmetric

has super-properties
in heterochronous homology relationship withop
has sub-properties
in hypermorphosis relationship withop

in plerology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000069

This phenomenon is usually due to gene conversion process.

has characteristics : symmetric

has super-properties
in paralogy relationship withop

in plesiomorphy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000043

This term is usually contrasted to apomorphy.

has characteristics : symmetric

has super-properties
in historical homology relationship withop

in postdisplacement relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000051

has characteristics : symmetric

has super-properties
in paedomorphorsis relationship withop

in pro-orthology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000025

has characteristics : symmetric

has super-properties
in 1 to many orthology relationship withop

in progenesis relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000031

has characteristics : symmetric

has super-properties
in paedomorphorsis relationship withop

in protein structural homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000015

has characteristics : symmetric

has super-properties
in structural homology relationship withop

in pseudoparalogy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000061

These genes may come out as paralogs in a single-genome analysis.

has characteristics : symmetric

has super-properties
in xenology relationship withop

in register withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002026

has super-properties
mereotopologically related toop
has domain
imagec
has range
imagec

in regulogy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000075

has characteristics : symmetric

has super-properties
in historical homology relationship withop

in reversal relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000009

has characteristics : symmetric

has super-properties
in homoplasy relationship withop

in semi-orthology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000026

The converse of pro-orthologous.

has characteristics : symmetric

has super-properties
in 1 to many orthology relationship withop

in serial homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000027

has characteristics : symmetric

has super-properties
in iterative homology relationship withop

in similarity relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000000

has characteristics : symmetric

has sub-properties
in functional equivalence relationship withop, in homocracy relationship withop, in homology relationship withop, in homoplasy relationship withop

in structural homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000006

has characteristics : symmetric

has super-properties
in homology relationship withop
has sub-properties
in homotopy relationship withop, in non functional homology relationship withop, in partial homology relationship withop, in protein structural homology relationship withop, in syntenic homology relationship withop

in syngeny relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000058

Cannot be used when orthologous patterning gene are organizing obviously non-homologous structures in different organisms due for example to pleiotropic functions of these genes.

has characteristics : symmetric

has super-properties
in homocracy relationship withop
has sub-properties
in latent homology relationship withop

in synology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000053

has characteristics : symmetric

has super-properties
in xenology relationship withop
has sub-properties
in homoeology relationship withop

in syntenic homology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000010

has characteristics : symmetric

has super-properties
in structural homology relationship withop
has sub-properties
in syntenic orthology relationship withop, in syntenic paralogy relationship withop

in syntenic orthology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000013

has characteristics : symmetric

has super-properties
in syntenic homology relationship withop

in syntenic paralogy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000012

has characteristics : symmetric

has super-properties
in syntenic homology relationship withop
in paralogy relationship withop

in tandem paralogy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000055

has characteristics : symmetric

has super-properties
in paralogy relationship withop

in taxonop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002162

Connects a biological entity to its taxon of origin.
has super-properties
evolutionarily related toop
has sub-properties
only in taxonop
has range
organismc
has sub-property chains
has partop o in taxonop
develops fromop o in taxonop
expressed inop o in taxonop
has prototypeop o in taxonop
capable ofop o in taxonop
develops from part ofop o in taxonop
has developmental contribution fromop o in taxonop
results in developmental progression ofop o in taxonop
part ofop o in taxonop

in within-species paralogy relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000049

has characteristics : symmetric

has super-properties
in paralogy relationship withop

in xenology relationship withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_HOM0000018

The term is sometimes also used for anatomical structures (e.g. in case of a symbiosis).

has characteristics : symmetric

has super-properties
in historical homology relationship withop
has sub-properties
in paraxenology relationship withop, in pseudoparalogy relationship withop, in synology relationship withop

increased in magnitude relative toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015007

This relation is used to determine the 'directionality' of relative qualities such as 'increased strength', relative to the parent type, 'strength'.
has super-properties
different in magnitude relative toop
has domain
qualityc
has range
qualityc

increases by expression quantity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011008

has super-properties
indirectly positively regulates quantity ofop
has domain
material entityc
has range
material entityc

increases expression ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003003

has super-properties
directly positively regulates activity ofop
has domain
material entityc
has range
material entityc

indirectly causally upstream ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012011

has super-properties
causally upstream ofop
has sub-properties
indirectly regulatesop

indirectly negatively regulatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002409

has characteristics : transitive

has super-properties
negatively regulatesop
indirectly regulatesop
has sub-property chains
indirectly negatively regulatesop o directly negatively regulatesop
directly negatively regulatesop o indirectly negatively regulatesop
directly negatively regulatesop o directly negatively regulatesop

indirectly negatively regulates activity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011016

has super-properties
indirectly regulates activity ofop

indirectly negatively regulates quantity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011023

has super-properties
indirectly regulates quantity ofop
has sub-properties
decreases by repression quantity ofop

indirectly positively regulatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002407

has characteristics : transitive

has super-properties
positively regulatesop
indirectly regulatesop
has sub-property chains
indirectly positively regulatesop o directly positively regulatesop
indirectly negatively regulatesop o indirectly negatively regulatesop
directly positively regulatesop o indirectly positively regulatesop
directly positively regulatesop o directly positively regulatesop

indirectly positively regulates activity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011013

has super-properties
indirectly regulates activity ofop
has domain
material entityc
has range
material entityc

indirectly positively regulates quantity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011024

has super-properties
indirectly regulates quantity ofop
has sub-properties
increases by expression quantity ofop

indirectly regulatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012012

has super-properties
regulatesop
indirectly causally upstream ofop
has sub-properties
indirectly negatively regulatesop, indirectly positively regulatesop

indirectly regulates activity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011004

has super-properties
regulates activity ofop
has sub-properties
indirectly negatively regulates activity ofop, indirectly positively regulates activity ofop
has domain
material entityc
has range
material entityc

indirectly regulates quantity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011022

has super-properties
regulates quantity ofop
has sub-properties
indirectly negatively regulates quantity ofop, indirectly positively regulates quantity ofop

innervated_byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002005

has domain
anatomical structurec
has range
neuron projection bundlec
is inverse of
innervatesop

innervatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002134

has domain
neuron projection bundlec
is inverse of
innervated_byop
has sub-property chains
innervatesop o part ofop

input ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002352

has super-properties
participates inop
functionally related toop
is inverse of
has inputop

interaction relation helper propertyop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002563

has super-properties
helper property (not for use in curation)op
has sub-properties
is symbiosisop, molecular interaction relation helper propertyop

interacts withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002434

has characteristics : symmetric

has sub-properties
biotically interacts withop, genetically interacts withop, molecularly interacts withop
has domain
material entityc
has range
material entityc

interacts with via parasite-host interactionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002443

has super-properties
symbiotically interacts withop
has sub-properties
parasite ofop, parasitized byop
has sub-property chains
partner inop o is parasitismop o

intercellular endoparasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002638

has super-properties
endoparasite ofop
is inverse of
has intercellular endoparasiteop

intracellular endoparasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002640

has super-properties
endoparasite ofop
is inverse of
has intracellular endoparasiteop

involved inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002331

has super-properties
participates inop
involved in or involved in regulation ofop
has sub-property chains
enablesop o part ofop
involved inop o part ofop

involved in negative regulation ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002430

has super-properties
involved in regulation ofop
has sub-property chains
enablesop o negatively regulatesop
involved inop o negatively regulatesop

involved in or involved in regulation ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002431

has super-properties
acts upstream of or withinop
functionally related toop
causal agent in processop
has sub-properties
involved inop, involved in regulation ofop

involved in positive regulation ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002429

has super-properties
involved in regulation ofop
has sub-property chains
enablesop o positively regulatesop
involved inop o positively regulatesop

involved in regulation ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002428

has super-properties
acts upstream ofop
involved in or involved in regulation ofop
has sub-properties
involved in negative regulation ofop, involved in positive regulation ofop
has sub-property chains
enablesop o regulatesop
involved inop o regulatesop

is active inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002432

has super-properties
overlapsop
functionally related toop
has sub-property chains
enablesop o occurs inop

is agonist ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018027

has super-properties
directly positively regulates activity ofop

is allergic trigger forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001020

has super-properties
causes or contributes to conditionop
has domain
material entityc
is inverse of
has allergic triggerop

is antagonist ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018029

has super-properties
directly negatively regulates activity ofop

is autoimmune trigger forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001021

has super-properties
causes or contributes to conditionop
has domain
material entityc
is inverse of
has autoimmune triggerop

is basis for realizableop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004018

has super-properties
causally related toop
has sub-properties
is genetic basis for conditionop
is inverse of
realizable has basis inop

is bound by sequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002523

has characteristics : transitive

has super-properties
sequentially related toop
has sub-properties
is subsequence ofop
is inverse of
bounds sequence ofop

is carrier ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0010002

has domain
independent continuantc
has range
generically dependent continuantc
is inverse of
generically depends onop
has sub-property chains
concretizesop o has characteristicop

is causal gain of function germline mutation of inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004011

has super-properties
is genetic basis for conditionop
is inverse of
has material basis in gain of function germline mutation inop

is causal germline mutation inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004013

has super-properties
causes conditionop
is genetic basis for conditionop
is inverse of
has material basis in germline mutation inop

is causal germline mutation partially giving rise toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004016

has super-properties
contributes to conditionop
is genetic basis for conditionop
is inverse of
has partial material basis in germline mutation inop

is causal loss of function germline mutation of inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004012

has super-properties
is genetic basis for conditionop
is inverse of
has material basis in loss of function germline mutation inop

is causal somatic mutation inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004014

has super-properties
causes conditionop
is genetic basis for conditionop
is inverse of
has material basis in somatic mutation inop

is causal susceptibility factor forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004015

has super-properties
is genetic basis for conditionop
is inverse of
has major susceptibility factorop

is commensalismop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002466

has super-properties
is symbiosisop

is concretized asop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000058

has domain
generically dependent continuantc
has range
characteristicc
is inverse of
concretizesop

is consecutive sequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002520

has super-properties
has subsequenceop

is deprotonated form ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018033

has characteristics : transitive

has super-properties
chemical relationshipop
has sub-properties
is direct conjugate base ofop
is inverse of
is protonated form ofop

is direct conjugate acid ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018032

has super-properties
is protonated form ofop
is inverse of
is direct conjugate base ofop

is direct conjugate base ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018031

has super-properties
is deprotonated form ofop
is inverse of
is direct conjugate acid ofop

is downstream of sequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002529

has characteristics : transitive

has super-properties
does not overlap sequence ofop
has sub-properties
is immediately downstream of sequence ofop
is inverse of
is downstream of sequence ofop, is downstream of sequence ofop

is eaten byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002471

has super-properties
biotically interacts withop

is enantiomer ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018039

has characteristics : symmetric

has super-properties
chemical relationshipop

is end sequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002519

has characteristics : transitive

has super-properties
is subsequence ofop
is inverse of
has end sequenceop

is evidence forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002472

has super-properties
related via evidence or inference toop
is inverse of
has evidenceop

is evidence with support fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002614

In the Gene Ontology association model, this corresponds to the With/From field
has super-properties
related via evidence or inference toop

is genetic basis for conditionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004010

has super-properties
is basis for realizableop
has sub-properties
is causal gain of function germline mutation of inop, is causal germline mutation inop, is causal germline mutation partially giving rise toop, is causal loss of function germline mutation of inop, is causal somatic mutation inop, is causal susceptibility factor forop
has range
realizablec
is inverse of
condition has genetic basis inop

is immediately downstream of sequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002530

has super-properties
sequentially adjacent toop
is downstream of sequence ofop

is immediately upstream of sequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002531

has super-properties
sequentially adjacent toop
is upstream of sequence ofop

is inverse agonist ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018028

has super-properties
directly negatively regulates activity ofop

is killed byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002627

has super-properties
participates in a biotic-biotic interaction withop
is inverse of
killsop

is kinase activityop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002481

has super-properties
molecular interaction relation helper propertyop

is marker forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002607

has super-properties
correlated withop

is matched small molecular pair withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018035

has characteristics : symmetric

has super-properties
chemical relationshipop

is mutualismop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002467

has super-properties
is symbiosisop

is myristoyltransferase activityop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018001

has super-properties
molecular interaction relation helper propertyop

is owned byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0017009

is inverse of
ownsop

is parasitismop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002468

has super-properties
is symbiosisop

is protonated form ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018034

has characteristics : transitive

has super-properties
chemical relationshipop
has sub-properties
is direct conjugate acid ofop
is inverse of
is deprotonated form ofop

is sequentially aligned withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002521

has characteristics : symmetric

has super-properties
sequentially related toop

is small molecule activator ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012005

has super-properties
capable of positively regulatingop
is small molecule regulator ofop
is inverse of
has small molecule activatorop

is small molecule inhibitor ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012006

has super-properties
capable of negatively regulatingop
is small molecule regulator ofop
is inverse of
has small molecule inhibitorop

is small molecule regulator ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012004

has super-properties
capable of regulatingop
has sub-properties
is small molecule activator ofop, is small molecule inhibitor ofop
is inverse of
has small molecule regulatorop

is start sequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002517

has characteristics : transitive

has super-properties
is subsequence ofop
is inverse of
has start sequenceop

is subsequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002525

has characteristics : transitive

has super-properties
part ofop
is bound by sequence ofop
overlaps sequence ofop
has sub-properties
is end sequence ofop, is start sequence ofop
is inverse of
has subsequenceop

is substance that treatsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002606

has super-properties
capable of inhibiting or preventing pathological processop
is inverse of
is treated by substanceop

is substitutent group fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018037

has super-properties
chemical relationshipop

is symbiosisop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002465

has super-properties
interaction relation helper propertyop
has sub-properties
is commensalismop, is mutualismop, is parasitismop

is tautomer ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018036

has characteristics : symmetric

has super-properties
chemical relationshipop

is treated by substanceop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002302

has super-properties
causally related toop
is inverse of
is substance that treatsop

is ubiquitinationop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002482

has super-properties
molecular interaction relation helper propertyop

is upstream of sequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002528

has characteristics : transitive

has super-properties
does not overlap sequence ofop
has sub-properties
is immediately upstream of sequence ofop

is vector forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002459

has super-properties
participates in a biotic-biotic interaction withop
is inverse of
has vectorop

killsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002626

has super-properties
participates in a biotic-biotic interaction withop
is inverse of
is killed byop

kleptoparasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008503

has super-properties
parasite ofop
is inverse of
kleptoparasitized byop

kleptoparasitized byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008504

has super-properties
parasitized byop
is inverse of
kleptoparasite ofop

lays eggs inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002624

has super-properties
parasite ofop
visitsop
is inverse of
has eggs laid in byop

lays eggs onop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0008507

has super-properties
visitsop
is inverse of
has eggs laid on byop

located inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001025

has characteristics : transitive

has sub-properties
tracheatesop
has domain
independent continuantc
independent continuantc and (not (spatial regionc))
has range
independent continuantc
independent continuantc and (not (spatial regionc))
is inverse of
location ofop
has sub-property chains
located inop o part ofop

location ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001015

has characteristics : transitive

is inverse of
located inop

lumen ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002571

has super-properties
part ofop
has sub-properties
luminal space ofop
has range
material entityc

luminal space ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002572

has super-properties
lumen ofop
has domain
immaterial entityc

main stem ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002381

has super-properties
part ofop
in branching relationship withop

member ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002350

has super-properties
part ofop
is inverse of
has memberop

mereotopologically related toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002323

has sub-properties
2D boundary ofop, attached to part ofop, coincident withop, colocalizes withop, connected toop, connectsop, continuous withop, has 2D boundaryop, in branching relationship withop, in register withop, overlapsop, spatially disjoint fromop

mesoparasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002636

has super-properties
parasite ofop
is inverse of
has mesoparasiteop

molecular interaction relation helper propertyop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002564

has super-properties
interaction relation helper propertyop
has sub-properties
is kinase activityop, is myristoyltransferase activityop, is ubiquitinationop

molecularly interacts withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002436

has characteristics : symmetric

has super-properties
interacts withop
has sub-properties
directly regulates activity ofop, myristoylatesop, phosphorylatesop, ubiquitinatesop

mutualistically interacts withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002442

has super-properties
symbiotically interacts withop
has sub-properties
pollinated byop, pollinatesop
has sub-property chains
partner inop o is mutualismop o

myristoylated byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018003

is inverse of
myristoylatesop

myristoylatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0018002

has super-properties
molecularly interacts withop
is inverse of
myristoylated byop
has sub-property chains
capable ofop o is myristoyltransferase activityop o has direct inputop

negatively correlated withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0017004

has characteristics : irreflexive, symmetric

has super-properties
correlated withop

negatively regulated byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002335

has super-properties
regulated byop
has sub-properties
has negative regulatory component activityop
is inverse of
negatively regulatesop

negatively regulatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002212

has super-properties
regulatesop
causally upstream of, negative effectop
has sub-properties
directly negatively regulatesop, indirectly negatively regulatesop
is inverse of
negatively regulated byop
has sub-property chains
ends withop o negatively regulatesop

negatively regulates characteristicop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0019002

has super-properties
regulates characteristicop
has sub-property chains
negatively regulatesop o positively regulates characteristicop
positively regulatesop o negatively regulates characteristicop

negatively regulates in another organismop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012014

has super-properties
regulates in another organismop

obligate parasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002227

has super-properties
parasite ofop

obsolete actively participates inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002217

Obsoleted as the inverse property was obsoleted.

obsolete contained inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001018

obsolete containsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001019

obsolete directly activatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002406

This term was obsoleted because it has the same meaning as 'directly positively regulates'.

obsolete directly inhibitsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002408

This term was obsoleted because it has the same meaning as 'directly negatively regulates'.

obsolete downstream in neural circuit withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000302

Obsoleted as no longer a useful relationship (all neurons in an organism are in a neural circuit with each other).

obsolete has active participantop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002218

obsolete has direct outputop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002402

obsolete has indirect inputop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002401

Likely to be obsoleted. See: https://docs.google.com/document/d/1QMhs9J-P_q3o_rDh-IX4ZEnz0PnXrzLRVkI3vvz8NEQ/edit

obsolete has indirect outputop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002403

Likely to be obsoleted. See: https://docs.google.com/document/d/1QMhs9J-P_q3o_rDh-IX4ZEnz0PnXrzLRVkI3vvz8NEQ/edit
has sub-property chains
causally upstream ofop o obsolete has direct outputop

obsolete in neural circuit withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000300

Obsoleted as no longer a useful relationship (all neurons in an organism are in a neural circuit with each other).

obsolete preceded byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000060

accidentally included in BFO 1.2 proposal - should have been BFO_0000062

obsolete related via dependence toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002609

obsolete upstream in neural circuit withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000301

Obsoleted as no longer a useful relationship (all neurons in an organism are in a neural circuit with each other).

occurrent part ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002012

has super-properties
part ofop
causally upstream of or withinop
has domain
occurrentc
has range
occurrentc

occurs acrossop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002021

has super-properties
has part that occurs inop
has sub-properties
results in transport acrossop

occurs inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000066

is defined by
http://purl.obolibrary.org/obo/bfo.owl
Paraphrase of definition: a relation between a process and an independent continuant, in which the process takes place entirely within the independent continuant
has domain
occurrentc
has range
independent continuantc
is inverse of
contains processop
has sub-property chains
part ofop o occurs inop
occurs inop o part ofop

only in taxonop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002160

has super-properties
in taxonop

output ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002353

has super-properties
participates inop
functionally related toop
has sub-properties
formed as result ofop
is inverse of
has outputop

over-expressed inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002245

has super-properties
expressed inop

overlapsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002131

has characteristics : symmetric

has super-properties
mereotopologically related toop
has sub-properties
conduit forop, contributes to morphology ofop, determined by part ofop, fasciculates withop, has dendrite locationop, has fasciculating neuron projectionop, has partop, has soma locationop, has synaptic terminal inop, has synaptic terminal ofop, is active inop, overlaps sequence ofop, part ofop, partially overlapsop, spatially coextensive withop
has sub-property chains
part ofop o part ofop
has partop o part ofop
has partop o overlapsop
overlapsop o part ofop

overlaps sequence ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002526

has characteristics : symmetric

has super-properties
overlapsop
sequentially related toop
has sub-properties
has subsequenceop, is subsequence ofop
has sub-property chains
has subsequenceop o is subsequence ofop

ownsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0017008

is inverse of
is owned byop

parasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002444

has super-properties
interacts with via parasite-host interactionop
has hostop
has sub-properties
ectoparasite ofop, endoparasite ofop, facultative parasite ofop, hemiparasite ofop, kleptoparasite ofop, lays eggs inop, mesoparasite ofop, obligate parasite ofop, parasitoid ofop, root parasite ofop, stem parasite ofop
is inverse of
parasitized byop
has sub-property chains
subject participant inop o is parasitismop o

parasitized byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002445

has super-properties
interacts with via parasite-host interactionop
host ofop
has sub-properties
has ectoparasiteop, has eggs laid in byop, has endoparasiteop, has mesoparasiteop, has parasitoidop, kleptoparasitized byop
is inverse of
parasite ofop

parasitoid ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002208

has super-properties
parasite ofop
is inverse of
has parasitoidop

part ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000050

has characteristics : transitive

has super-properties
overlapsop
has sub-properties
active ingredient inop, bounding layer ofop, branching part ofop, determined byop, endsop, is subsequence ofop, lumen ofop, main stem ofop, member ofop, occurrent part ofop, skeleton ofop, startsop, subcluster ofop
is inverse of
has partop

part of developmental precursor ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002287

has super-properties
developmentally succeeded byop
has sub-property chains
part ofop o directly develops intoop

part of structure that is capable ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002329

has super-properties
functionally related toop
has sub-properties
contributes toop
has sub-property chains
part ofop o capable ofop

partially overlapsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002151

has super-properties
overlapsop

participates inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000056

has sub-properties
input ofop, involved inop, output ofop, partner inop
has domain
continuantc
has range
occurrentc
is inverse of
has participantop

participates in a abiotic-biotic interaction withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002446

has super-properties
biotically interacts withop

participates in a biotic-biotic interaction withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002574

has super-properties
biotically interacts withop
has sub-properties
allelopath ofop, has vectorop, is killed byop, is vector forop, killsop, symbiotically interacts withop, trophically interacts withop, visited byop, visitsop
has domain
organismc
has range
organismc

partner inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002461

has super-properties
participates inop
has sub-properties
subject participant inop, target participant inop

pathogen ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002556

has super-properties
has hostop
is inverse of
has pathogenop

phenotype ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002201

has characteristics : functional

is inverse of
has phenotypeop

phosphorylatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002447

has super-properties
molecularly interacts withop
has sub-property chains
capable ofop o is kinase activityop o has direct inputop

pollinated byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002456

has super-properties
mutualistically interacts withop
is inverse of
pollinatesop

pollinatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002455

has super-properties
mutualistically interacts withop
is inverse of
pollinated byop

positively correlated withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0017003

has characteristics : symmetric

has super-properties
correlated withop

positively regulated byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002336

has super-properties
regulated byop
has sub-properties
has necessary component activityop, has positive regulatory component activityop
is inverse of
positively regulatesop

positively regulatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002213

has characteristics : transitive

has super-properties
regulatesop
causally upstream of, positive effectop
has sub-properties
directly positively regulatesop, indirectly positively regulatesop
is inverse of
positively regulated byop
has sub-property chains
negatively regulatesop o negatively regulatesop
ends withop o positively regulatesop

positively regulates characteristicop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0019001

has super-properties
regulates characteristicop
has sub-property chains
positively regulatesop o positively regulates characteristicop

positively regulates in another organismop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012013

has super-properties
regulates in another organismop

preceded byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000062

has characteristics : transitive

has super-properties
ends afterop
has sub-properties
causally downstream ofop, immediately preceded byop
has domain
occurrentc
has range
occurrentc
is inverse of
precedesop
has sub-property chains
part ofop o preceded byop
starts duringop o preceded byop
happens duringop o preceded byop

precedesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000063

has characteristics : transitive

has super-properties
temporally related toop
has sub-properties
causally upstream ofop, immediately precedesop
has domain
occurrentc
has range
occurrentc
is inverse of
preceded byop
has sub-property chains
happens duringop o precedesop
part ofop o precedesop

preyed upon byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002458

has super-properties
trophically interacts withop
is inverse of
preys onop

preys onop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002439

has super-properties
trophically interacts withop
is inverse of
preyed upon byop

process has causal agentop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002608

has super-properties
causally related toop
is inverse of
causal agent in processop

produced byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003001

has domain
material entityc
has range
material entityc
is inverse of
producesop

producesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003000

Note that this definition doesn't quite distinguish the output of a transformation process from a production process, which is related to the identity/granularity issue.
has domain
material entityc
has range
material entityc
is inverse of
produced byop
has sub-property chains
o has outputop

proper distributary ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002382

has super-properties
distributary ofop

proper tributary ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002383

has super-properties
tributary ofop

provides input forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002413

has super-properties
immediately causally upstream ofop
transitively provides input forop
has sub-property chains
obsolete has direct outputop o has direct inputop

provides nutrients forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002469

has super-properties
biotically interacts withop
is inverse of
acquires nutrients fromop

quality ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000080

This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.
has super-properties
characteristic ofop
is inverse of
has qualityop

realizable has basis inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004017

has super-properties
causally related toop
has sub-properties
disease has basis inop
is inverse of
is basis for realizableop

realized inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000054

is defined by
http://purl.obolibrary.org/obo/bfo.owl
Paraphrase of elucidation: a relation between a realizable entity and a process, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process
has domain
realizablec
has range
processc
is inverse of
realizesop

realized in response toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0009501

has super-properties
causally related toop
has domain
realizablec
has range
processc
has sub-property chains
realized inop o causally downstream ofop

realized in response to stimulusop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004028

has super-properties
causally related toop
has domain
realizablec
has range
material entityc
has sub-property chains
realized in response toop o has inputop

realizesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000055

is defined by
http://purl.obolibrary.org/obo/iao.owl
Paraphrase of elucidation: a relation between a process and a realizable entity, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process
has domain
processc
has range
realizablec
is inverse of
realized inop

receives input fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002485

has super-properties
connected toop
has sub-properties
synapsed byop
is inverse of
sends output toop

receives synaptic input from neuronop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013008

has super-properties
synapsed byop
is inverse of
sends synaptic output to cellop

receives synaptic input in regionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013002

has super-properties
has postsynaptic terminal inop
has synaptic IO in regionop
has sub-properties
receives synaptic input throughoutop
has sub-property chains
receives synaptic input in regionop o part ofop

receives synaptic input throughoutop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013005

has super-properties
receives synaptic input in regionop
has synaptic IO throughoutop

reciprocal ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015012

There are frequently two ways to state the same thing: we can say 'spermatocyte lacks asters' or 'asters absent from spermatocyte'. In this case the quality is 'lacking all parts of type' - it is a (relational) quality of the spermatocyte, and it is with respect to instances of 'aster'. One of the popular requirements of PATO is that it continue to support 'absent', so we need to relate statements which use this quality to the 'lacking all parts of type' quality.

regulated byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002334

has characteristics : transitive

has super-properties
causally downstream of or withinop
has sub-properties
directly regulated byop, has regulatory component activityop, negatively regulated byop, positively regulated byop
has domain
processc
has range
processc
is inverse of
regulatesop

regulatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002211

has characteristics : transitive

has super-properties
causally upstream ofop
has sub-properties
directly regulatesop, indirectly regulatesop, negatively regulatesop, positively regulatesop
has domain
processc
has range
processc
is inverse of
regulated byop
has sub-property chains
regulatesop o has effector activityop
ends withop o regulatesop
directly regulatesop o directly regulatesop

regulates activity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011002

has super-properties
causally influencesop
has sub-properties
directly regulates activity ofop, indirectly regulates activity ofop
has domain
material entityc
has range
material entityc

regulates characteristicop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0019000

has super-properties
causally related toop
has sub-properties
negatively regulates characteristicop, positively regulates characteristicop
has domain
processc
has range
qualityc
has sub-property chains
regulatesop o regulates characteristicop

regulates in another organismop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002010

has super-properties
causally upstream of or withinop
has sub-properties
negatively regulates in another organismop, positively regulates in another organismop
has domain
processc
has range
processc

regulates levels ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002332

has super-properties
functionally related toop
has domain
processc
has range
material entityc

regulates quantity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011003

has super-properties
causally influencesop
has sub-properties
directly regulates quantity ofop, indirectly regulates quantity ofop
has domain
material entityc
has range
material entityc

regulates transport ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002011

has sub-property chains
regulatesop o transports or maintains localization ofop

related via evidence or inference toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002616

has sub-properties
has evidenceop, is evidence forop, is evidence with support fromop

related via exposure toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002244

has super-properties
causally related toop
has sub-properties
has exposure mediumop, has exposure receptorop, has exposure routeop, has exposure stimulusop, has exposure transport pathop
has domain
exposure of organismc

related via localization toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002337

has sub-properties
results in transport alongop, results in transport to from or inop, transports or maintains localization ofop
has domain
processc
has range
continuantc

relation between physical entity and a process or stageop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002487

has sub-properties
existence ends during or beforeop, existence overlapsop, existence starts during or afterop
has domain
independent continuantc
has range
occurrentc

releases neurotransmitterop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002111

has domain
anatomical structurec
has range
material entityc

removes input forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012010

has super-properties
causally upstream of, negative effectop

represses expression ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0003002

has super-properties
directly negatively regulates activity ofop
has domain
material entityc
has range
material entityc

reservoir host ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002802

A reservoir is a population, species or community (assemblage of different species in a given geographic area) in which a microorganism naturally occurs and is indefinitely maintained. Some zoonotic pathogens, particularly bacterial pathogens, may also have environmental reservoirs. Microorganisms with multiple reservoir species may be indefinitely maintained across the community of species even if they are not always present in each individual reservoir species. In the reservoir species or community, the microorganism may cause either asymptomatic infection or disease and this may vary among individuals. A pathogen may also be more genetically diverse in its reservoir host than in other taxa, in part because the pathogen is endemic to reservoir hosts.
has super-properties
host ofop
is inverse of
has reservoir hostop

results in acquisition of features ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002315

has super-properties
results in developmental progression ofop
results in changes to anatomical or cellular structureop
has range
anatomical structurec

results in adhesion ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012007

has super-properties
results in changes to anatomical or cellular structureop

results in assembly ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002588

has super-properties
results in formation of anatomical entityop
results in organization ofop

results in breakdown ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002586

has super-properties
has inputop
has sub-properties
results in catabolism ofop, results in disassembly ofop

results in catabolism ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002589

has super-properties
results in breakdown ofop

results in changes to anatomical or cellular structureop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0040036

has super-properties
has participantop
has sub-properties
results in acquisition of features ofop, results in adhesion ofop, results in closure ofop, results in development ofop, results in ending ofop, results in growth ofop, results in maturation ofop, results in morphogenesis ofop, results in movement ofop, results in organization ofop, results in structural organization ofop, transports or maintains localization ofop

results in closure ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002585

has super-properties
results in developmental progression ofop
results in changes to anatomical or cellular structureop

results in commitment toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002348

has super-properties
results in developmental progression ofop
has range
cellc

results in determination ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002349

has super-properties
results in developmental progression ofop
has range
cellc

results in development ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002296

has super-properties
results in developmental progression ofop
results in changes to anatomical or cellular structureop

results in developmental induction ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002357

has super-properties
results in developmental progression ofop

results in developmental progression ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002295

has super-properties
developmentally related toop
has sub-properties
results in acquisition of features ofop, results in closure ofop, results in commitment toop, results in determination ofop, results in development ofop, results in developmental induction ofop, results in ending ofop, results in formation of anatomical entityop, results in growth ofop, results in maturation ofop, results in morphogenesis ofop, results in specification ofop, results in structural organization ofop
has domain
biological processc
has range
anatomical entityc

results in developmental regression ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002301

has super-properties
results in ending ofop

results in disappearance ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002300

has super-properties
results in ending ofop

results in disassembly ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002590

has super-properties
results in breakdown ofop
results in organization ofop

results in ending ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002552

has super-properties
results in developmental progression ofop
results in changes to anatomical or cellular structureop
has sub-properties
results in developmental regression ofop, results in disappearance ofop

results in formation of anatomical entityop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002297

has super-properties
has outputop
results in developmental progression ofop
has sub-properties
results in assembly ofop, results in synthesis ofop
is inverse of
formed as result ofop

results in fusion ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0012008

has super-properties
results in organization ofop

results in growth ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002343

has super-properties
results in developmental progression ofop
results in changes to anatomical or cellular structureop

results in maturation ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002299

has super-properties
results in developmental progression ofop
results in changes to anatomical or cellular structureop

results in morphogenesis ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002298

has super-properties
results in developmental progression ofop
results in changes to anatomical or cellular structureop

results in movement ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002565

has super-properties
results in changes to anatomical or cellular structureop

results in organization ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002592

has super-properties
results in changes to anatomical or cellular structureop
has sub-properties
results in assembly ofop, results in disassembly ofop, results in fusion ofop, results in remodeling ofop

results in remodeling ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002591

has super-properties
has inputop
results in organization ofop

results in specification ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002356

has super-properties
results in developmental progression ofop
has range
cellc

results in structural organization ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002355

has super-properties
results in developmental progression ofop
results in changes to anatomical or cellular structureop

results in synthesis ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002587

has super-properties
results in formation of anatomical entityop

results in transport acrossop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002342

has super-properties
occurs acrossop
results in transport to from or inop

results in transport alongop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002341

has super-properties
related via localization toop

results in transport to from or inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002344

has super-properties
related via localization toop
has sub-properties
has target end locationop, has target start locationop, results in transport acrossop

ribosomal translation ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002512

has super-properties
genomically related toop
has domain
generically dependent continuantc or material entityc
has range
generically dependent continuantc or material entityc
is inverse of
ribosomally translates toop

ribosomally translates toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002513

has super-properties
genomically related toop
has domain
generically dependent continuantc or material entityc
has range
generically dependent continuantc or material entityc
is inverse of
ribosomal translation ofop

role ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000081

This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.
has super-properties
characteristic ofop
is inverse of
has roleop

root parasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002236

has super-properties
parasite ofop

sends output toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002486

has super-properties
connected toop
has sub-properties
synapsed toop
is inverse of
receives input fromop

sends synaptic output throughoutop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013006

has super-properties
sends synaptic output to regionop
has synaptic IO throughoutop

sends synaptic output to cellop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013009

Not restricting range to 'cell' - object may be a muscle containing a cell targeted by the neuron.
has super-properties
synapsed toop
is inverse of
receives synaptic input from neuronop

sends synaptic output to regionop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0013003

has super-properties
has presynaptic terminal inop
has synaptic IO in regionop
has sub-properties
sends synaptic output throughoutop
has sub-property chains
sends synaptic output to regionop o part ofop

sequentially adjacent toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002515

has super-properties
does not overlap sequence ofop
has sub-properties
is immediately downstream of sequence ofop, is immediately upstream of sequence ofop

sequentially related toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002514

has sub-properties
bounds sequence ofop, does not overlap sequence ofop, is bound by sequence ofop, is sequentially aligned withop, overlaps sequence ofop
has domain
sequentially ordered entityc
has range
sequentially ordered entityc

serially homologous toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002159

has characteristics : symmetric, transitive

has super-properties
evolutionarily related toop

shares ancestor withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002158

VBO calls this homologous_to

has characteristics : symmetric, transitive

has super-properties
evolutionarily related toop
has sub-properties
in homology relationship withop
has sub-property chains
derived by descent fromop o has derived by descendantop

similar in magnitude relative toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015009

simultaneous withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002082

t1 simultaneous_with t2 iff:= t1 before_or_simultaneous_with t2 and not (t1 before t2)

has characteristics : symmetric, transitive

has super-properties
before or simultaneous withop

skeleton ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002576

has super-properties
part ofop
has domain
anatomical structurec
has range
anatomical structurec
is inverse of
has skeletonop

spatially coextensive withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002379

has super-properties
overlapsop
has sub-property chains
located inop o

spatially disjoint fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002163

has super-properties
mereotopologically related toop
has sub-properties
adjacent toop

stabilizes quantity ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0011015

has super-properties
directly positively regulates quantity ofop
has domain
material entityc
has range
material entityc

startsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002223

has super-properties
part ofop
temporally related toop
is inverse of
starts withop

starts beforeop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002089

has characteristics : transitive

has super-properties
temporally related toop
has sub-property chains
starts duringop o obsolete preceded byop

starts duringop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002091

X starts_during Y iff: (start(Y) before_or_simultaneous_with start(X)) AND (start(X) before_or_simultaneous_with end(Y))
has super-properties
temporally related toop
has sub-properties
happens duringop
has domain
occurrentc
has range
occurrentc
is inverse of
during which startsop

starts withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002224

has characteristics : transitive

has super-properties
has partop
temporally related toop
is inverse of
startsop

stem parasite ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002235

has super-properties
parasite ofop

subcluster ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0015003

has characteristics : transitive

has super-properties
part ofop

subject participant inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002462

has super-properties
partner inop

suppliesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002178

has super-properties
connected toop
has sub-properties
directly supplies and drainsop, vessel supplies blood toop

surrounded byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002219

has super-properties
adjacent toop
is inverse of
surroundsop

surroundsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002221

has super-properties
adjacent toop
is inverse of
surrounded byop

symbiotically interacts withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002440

has characteristics : symmetric

has super-properties
participates in a biotic-biotic interaction withop
has sub-properties
commensually interacts withop, epiphyte ofop, has epiphyteop, has hostop, host ofop, interacts with via parasite-host interactionop, mutualistically interacts withop
has sub-property chains
partner inop o is symbiosisop o

synapsed byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002103

has super-properties
receives input fromop
has sub-properties
receives synaptic input from neuronop, synapsed_by_via_type_III_boutonop, synapsed_by_via_type_II_boutonop, synapsed_by_via_type_Ib_boutonop, synapsed_by_via_type_Is_boutonop
has range
neuronc or (part ofop some neuronc)
is inverse of
synapsed toop

synapsed toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002120

N1 synapsed_to some N2 Expands to: N1 SubclassOf ( has_part some ( ‘pre-synaptic membrane ; GO:0042734’ that part_of some ( ‘synapse ; GO:0045202’ that has_part some ( ‘post-synaptic membrane ; GO:0045211’ that part_of some N2))))
has super-properties
sends output toop
has sub-properties
sends synaptic output to cellop, synapsed_via_type_III_bouton_toop, synapsed_via_type_II_bouton_toop, synapsed_via_type_Ib_bouton_toop, synapsed_via_type_Is_bouton_toop
has domain
neuronc or (part ofop some neuronc)
is inverse of
synapsed byop

synapsed_by_via_type_Ib_boutonop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002109

Expands to: has_part some ('presynaptic membrane' that part_of some ('synapse' that has_part some ('type Ib terminal button' that has_part some 'postsynaptic membrane' that part_of some ?Y)))))
has super-properties
synapsed byop
is inverse of
synapsed_via_type_Ib_bouton_toop

synapsed_by_via_type_II_boutonop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002108

Expands to: has_part some ('presynaptic membrane' that part_of some ('synapse' that has_part some ('type II terminal button' that has_part some 'postsynaptic membrane' that part_of some ?Y)))))
has super-properties
synapsed byop
is inverse of
synapsed_via_type_II_bouton_toop

synapsed_by_via_type_III_boutonop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002115

Expands to: has_part some ('presynaptic membrane' that part_of some ('synapse' that has_part some ('type III terminal button' that has_part some 'postsynaptic membrane' that part_of some ?Y)))))
has super-properties
synapsed byop
is inverse of
synapsed_via_type_III_bouton_toop

synapsed_by_via_type_Is_boutonop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002112

Expands to: has_part some ('presynaptic membrane' that part_of some ('synapse' that has_part some ('type Is terminal button' that has_part some 'postsynaptic membrane' that part_of some ?Y)))))
has super-properties
synapsed byop
is inverse of
synapsed_via_type_Is_bouton_toop

synapsed_via_type_Ib_bouton_toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002105

Expands to: has_part some ('type Ib terminal button' that has_part some ('pre-synaptic membrane' that part_of some ('synapse' that has_part some ('post-synaptic membrane' that part_of some ?Y))))
has super-properties
synapsed toop
is inverse of
synapsed_by_via_type_Ib_boutonop

synapsed_via_type_II_bouton_toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002107

Expands to: has_part some ('type II terminal button' that has_part some ('pre-synaptic membrane' that part_of some ('synapse' that has_part some ('post-synaptic membrane' that part_of some ?Y))))
has super-properties
synapsed toop
is inverse of
synapsed_by_via_type_II_boutonop

synapsed_via_type_III_bouton_toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002114

Expands to: has_part some ('type III terminal button' that has_part some ('pre-synaptic membrane' that part_of some ('synapse' that has_part some ('post-synaptic membrane' that part_of some ?Y))))
has super-properties
synapsed toop
is inverse of
synapsed_by_via_type_III_boutonop

synapsed_via_type_Is_bouton_toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002106

Expands to: has_part some ('type Is terminal button' that has_part some ('pre-synaptic membrane' that part_of some ('synapse' that has_part some ('post-synaptic membrane' that part_of some ?Y))))
has super-properties
synapsed toop
is inverse of
synapsed_by_via_type_Is_boutonop

target participant inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002463

has super-properties
partner inop

temporally related toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002222

A relation that holds between two occurrents. This is a grouping relation that collects together all the Allen relations.
has sub-properties
before or simultaneous withop, during which endsop, during which startsop, endsop, ends afterop, ends duringop, ends withop, precedesop, startsop, starts beforeop, starts duringop, starts withop
has domain
occurrentc
has range
occurrentc

towardsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002503

has super-properties
depends onop

tracheatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002004

has super-properties
located inop
has domain
anatomical structurec
has range
anatomical structurec

transcribed fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002510

has super-properties
genomically related toop
has domain
generically dependent continuantc or material entityc
has range
generically dependent continuantc or material entityc
is inverse of
transcribed toop

transcribed toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002511

has super-properties
genomically related toop
is inverse of
transcribed fromop

transformation ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002494

has characteristics : transitive

has super-properties
develops fromop
has sub-properties
immediate transformation ofop

transitively provides input forop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002414

has characteristics : transitive

has super-properties
causally upstream of or within, positive effectop
has sub-properties
provides input forop
has domain
processc
has range
processc

transmitted byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002451

has super-properties
ecologically related toop

transportsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002020

has super-properties
transports or maintains localization ofop
has sub-properties
exportsop, importsop

transports or maintains localization ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002313

has super-properties
related via localization toop
results in changes to anatomical or cellular structureop
has sub-properties
transportsop

tributary ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002376

has super-properties
connected toop
in branching relationship withop
has sub-properties
proper tributary ofop

trophically interacts withop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002438

has super-properties
participates in a biotic-biotic interaction withop
has sub-properties
preyed upon byop, preys onop

ubiquitinatesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002480

has super-properties
molecularly interacts withop
has sub-property chains
capable ofop o is ubiquitinationop o has direct inputop

ubiquitously expressed inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002291

has super-properties
expressed inop
is inverse of
ubiquitously expressesop

ubiquitously expressesop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002293

has super-properties
expressesop
is inverse of
ubiquitously expressed inop

under-expressed inop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002246

has super-properties
expressed inop

vessel drains blood fromop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0020102

has super-properties
drainsop
has domain
blood vesselc
has range
anatomical structurec

vessel supplies blood toop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0020101

has super-properties
suppliesop
has domain
blood vesselc
has range
anatomical structurec

visited byop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002619

has super-properties
participates in a biotic-biotic interaction withop
has sub-properties
has eggs laid in byop, has eggs laid on byop, has flowers visited byop
is inverse of
visitsop

visitsop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002618

has super-properties
participates in a biotic-biotic interaction withop
has sub-properties
lays eggs inop, lays eggs onop, visits flowers ofop
is inverse of
visited byop

visits flowers ofop back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002622

has super-properties
visitsop
is inverse of
has flowers visited byop

Data Properties

has increased age-specific mortality ratedp back to ToC or Data Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002029

This could be used to record the increased infant morality rate in some population compared to wild-type. For examples of usage see http://purl.obolibrary.org/obo/FBcv_0000351 and subclasses.
has range

Named Individuals

Aleix Puig-Barbéni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0001-6677-8489

Anna Maria Mascini back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0003-1940-6740

Anne Thessenni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0002-2908-3327

Asiyah Yu Linni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0003-2620-0345

Austin Meierni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0001-6996-0040

axiom holds for all timesni back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/RO_0001901

Charles Tapley Hoytni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0003-4423-4370

Christian J Stoeckertni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0002-5714-991X

Christopher J. Mungallni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0002-6601-2165

Damion M Dooleyni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0002-8844-9165

David Osumi-Sutherlandni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0002-7073-9172

example to be eventually removedni back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000002

James P. Balhoffni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0002-8688-6599

Jie Zhengni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0002-2999-0103

Jorrit Poelenni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0003-3138-4118

Lauren E. Channi back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0002-7463-6306

Lindsay G Cowellni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0003-1617-8244

Lynn Schrimlni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0001-8910-9851

Marie-Angélique Laporteni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0002-8461-9745

Mathias Brochhausenni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0003-1834-3856

metadata completeni back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000120

metadata incompleteni back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000123

organizational termni back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000121

Pascale Gaudetni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0003-1813-6857

pending final vettingni back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000125

belongs to
curation status specificationc

Pier Luigi Buttigiegni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0002-4366-3088

Raymund Stefancsikni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0001-8314-2140

ready for releaseni back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000122

relation has no temporal argumentni back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/RO_0001902

requires discussionni back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000428

belongs to
curation status specificationc

S. Clint Dowlandni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0003-1909-9269

Shawn Zheng Kai Tanni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0001-7258-9596

to be replaced with external ontology termni back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000423

uncuratedni back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000124

William D Duncanni back to ToC or Named Individual ToC

IRI: https://orcid.org/0000-0001-9625-1899

Annotation Properties

alternative labelap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000118

Consider re-defing to: An alternative name for a class or property which can mean the same thing as the preferred name (semantically equivalent, narrow, broad or related).
has sub-properties
has broad synonymap, has exact synonymap, has narrow synonymap, has related synonymap

always present in taxonap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002504

has super-properties
present in taxonap

ambiguous for taxonap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002173

has super-properties
taxonomic class assertionap

annotation property cardinalityap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002419

has super-properties
logical macro assertion on an annotation propertyap
has range
non negative integer

axiom contradicted by evidenceap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002613

has super-properties
evidential logical macro assertion on an axiomap

axiom has evidenceap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002612

has super-properties
evidential logical macro assertion on an axiomap

bug databaseap back to ToC or Annotation Property ToC

IRI: http://usefulinc.com/ns/doap#bug-database

cites as authorityap back to ToC or Annotation Property ToC

IRI: http://purl.org/spar/cito/citesAsAuthority

close matchap back to ToC or Annotation Property ToC

IRI: http://www.w3.org/2004/02/skos/core#closeMatch

commentap back to ToC or Annotation Property ToC

IRI: http://www.w3.org/2000/01/rdf-schema#comment

common anatomyap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/uberon/core#common_anatomy

has super-properties
subset_propertyap

conforms toap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/conformsTo

contributorap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/contributor

contributorap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/contributor

created byap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#created_by

creation dateap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#creation_date

creatorap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/creator

creatorap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/creator

curator guidance linkap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002484

has super-properties
inherited annotation propertyap

curator noteap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000232

database_cross_referenceap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#hasDbXref

dateap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/date

default namespaceap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#default-namespace

defined by constructap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/OMO_0002000

Contributors :
https://orcid.org/0000-0002-7356-1779
https://orcid.org/0000-0002-8688-6599

defined by inverseap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002259

has super-properties
subset_propertyap

definitionap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000115

definition sourceap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000119

descriptionap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/description

descriptionap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/description

dispositional interpretationap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002474

has super-properties
logical macro assertion on an object propertyap

dubious for taxonap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002174

This relation lacks a strong logical interpretation, but can be used in place of never_in_taxon where it is desirable to state that the definition of the class is too strict for the taxon under consideration, but placing a never_in_taxon link would result in a chain of inconsistencies that will take ongoing coordinated effort to resolve. Example: metencephalon in teleost
has super-properties
taxonomic class assertionap

eco subsetap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/ro/subsets#ro-eco

has super-properties
subset_propertyap

editor noteap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000116

editor noteap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#editor_note

editor preferred termap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000111

efo slimap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/uberon/core#efo_slim

has super-properties
subset_propertyap

elucidationap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000600

end, days post coitumap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002548

has super-properties
has end time valueap

end, days post fertilizationap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002540

has super-properties
has end time valueap

end, months post birthap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002544

has super-properties
has end time valueap

end, weeks post birthap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002550

has super-properties
has end time valueap

end, years post birthap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002542

has super-properties
has end time valueap

evidential logical macro assertion on an axiomap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002611

has super-properties
logical macro assertion on an axiomap
has sub-properties
axiom contradicted by evidenceap, axiom has evidenceap

exact matchap back to ToC or Annotation Property ToC

IRI: http://www.w3.org/2004/02/skos/core#exactMatch

example of usageap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000112

expand assertion toap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000425

expand expression toap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000424

first order logic expressionap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000426

has super-properties
logical macro assertion on an object propertyap

git repositoryap back to ToC or Annotation Property ToC

IRI: http://usefulinc.com/ns/doap#GitRepository

has broad synonymap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym

has super-properties
alternative labelap

has curation statusap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000114

has developmental stage markerap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002546

has super-properties
temporal logical macro assertion on a classap

has end time valueap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002538

has super-properties
temporal logical macro assertion on a classap
has sub-properties
end, days post coitumap, end, days post fertilizationap, end, months post birthap, end, weeks post birthap, end, years post birthap

has exact synonymap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#hasExactSynonym

has super-properties
alternative labelap

has narrow synonymap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym

has super-properties
alternative labelap

has no connections withap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002475

has super-properties
logical macro assertion on a classap

has ontology root termap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000700

has related synonymap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym

has super-properties
alternative labelap

has start time valueap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002537

has super-properties
temporal logical macro assertion on a classap
has sub-properties
start, days post coitumap, start, days post fertilizationap, start, months post birthap, start, weeks post birthap, start, years post birthap

has_obo_format_versionap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion

homepageap back to ToC or Annotation Property ToC

IRI: http://xmlns.com/foaf/0.1/homepage

human reference atlasap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas

has super-properties
subset_propertyap

idap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#id

imported fromap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000412

in approximate one to one relationship withap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002602

has super-properties
logical macro assertion involving identityap
has sub-properties
is approximately equivalent toap, is opposite ofap

in_subsetap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#inSubset

inherited annotation propertyap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002483

has sub-properties
curator guidance linkap

is a defining property chain axiomap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002581

has super-properties
logical macro assertion on an axiomap
has sub-properties
is a defining property chain axiom where second argument is reflexiveap

is a defining property chain axiom where second argument is reflexiveap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002582

has super-properties
is a defining property chain axiomap

is approximately equivalent toap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002603

has super-properties
in approximate one to one relationship withap
has sub-properties
is indistinguishable fromap

is asymmetric relational form of process classap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002560

has super-properties
is relational form of process classap

is direct form ofap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002575

has super-properties
logical macro assertion on an object propertyap

is directional form ofap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004048

has super-properties
logical macro assertion on an object propertyap
has sub-properties
is negative form ofap, is positive form ofap

is homeomorphic forap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0040042

R homeomorphic-for C expands to: C SubClassOf R only C. Additionally, for any class D that is disjoint with C, we can also expand to C DisjointWith R some D, D DisjointWith R some C.
has super-properties
logical macro assertion on an object propertyap

is indirect form ofap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002579

has super-properties
logical macro assertion on an object propertyap

is indistinguishable fromap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002605

has super-properties
is approximately equivalent toap

is negative form ofap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004050

has super-properties
is directional form ofap

is opposite ofap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002604

has super-properties
in approximate one to one relationship withap

is positive form ofap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004049

has super-properties
is directional form ofap

is referenced byap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/isReferencedBy

is relational form of a classap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002594

has super-properties
logical macro assertion on an object propertyap
has sub-properties
is relational form of process classap

is relational form of process classap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002562

has super-properties
is relational form of a classap
has sub-properties
is asymmetric relational form of process classap, is symmetric relational form of process classap

is representative IRI for equivalence setap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002617

has super-properties
logical macro assertion involving identityap

is rule enabledap back to ToC or Annotation Property ToC

IRI: http://swrl.stanford.edu/ontologies/3.3/swrla.owl#isRuleEnabled

is symmetric relational form of process classap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002561

has super-properties
is relational form of process classap

labelap back to ToC or Annotation Property ToC

IRI: http://www.w3.org/2000/01/rdf-schema#label

licenseap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/license

logical macro assertionap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002416

has sub-properties
logical macro assertion involving identityap, logical macro assertion on a classap, logical macro assertion on a propertyap, logical macro assertion on an axiomap

logical macro assertion involving identityap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002601

has super-properties
logical macro assertionap
has sub-properties
in approximate one to one relationship withap, is representative IRI for equivalence setap

logical macro assertion on a classap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002420

has super-properties
logical macro assertionap
has sub-properties
has no connections withap, mutually spatially disjoint withap, taxonomic class assertionap, temporal logical macro assertion on a classap

logical macro assertion on a propertyap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002421

has super-properties
logical macro assertionap
has sub-properties
logical macro assertion on an annotation propertyap, logical macro assertion on an object propertyap

logical macro assertion on an annotation propertyap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002423

has super-properties
logical macro assertion on a propertyap
has sub-properties
annotation property cardinalityap, measurement property has unitap

logical macro assertion on an axiomap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002580

has super-properties
logical macro assertionap
has sub-properties
evidential logical macro assertion on an axiomap, is a defining property chain axiomap

logical macro assertion on an object propertyap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002422

has super-properties
logical macro assertion on a propertyap
has sub-properties
dispositional interpretationap, first order logic expressionap, is direct form ofap, is directional form ofap, is homeomorphic forap, is indirect form ofap, is relational form of a classap, nominally disjoint withap, temporal interpretationap

mailing listap back to ToC or Annotation Property ToC

IRI: http://usefulinc.com/ns/doap#mailing-list

measurement property has unitap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002536

has super-properties
logical macro assertion on an annotation propertyap

month of gestationap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002545

has super-properties
temporal logical macro assertion on a classap

mutually spatially disjoint withap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002171

has super-properties
logical macro assertion on a classap

never in taxonap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002161

has super-properties
taxonomic class assertionap

nominally disjoint withap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0004036

has super-properties
logical macro assertion on an object propertyap

OBO foundry unique labelap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000589

pheno slimap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/uberon/core#pheno_slim

has super-properties
subset_propertyap

present in taxonap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002175

The SPARQL expansion for this relation introduces new named classes into the ontology. For this reason it is likely that the expansion should only be performed during a QC pipeline; the expanded output should usually not be included in a published version of the ontology.
has super-properties
taxonomic class assertionap
has sub-properties
always present in taxonap

publisherap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/publisher

s v n repositoryap back to ToC or Annotation Property ToC

IRI: http://usefulinc.com/ns/doap#SVNRepository

see alsoap back to ToC or Annotation Property ToC

IRI: http://www.w3.org/2000/01/rdf-schema#seeAlso

sourceap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/source

sourceap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/source

sourceap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#source

start, days post coitumap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002547

has super-properties
has start time valueap

start, days post fertilizationap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002539

has super-properties
has start time valueap

start, months post birthap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002543

has super-properties
has start time valueap

start, weeks post birthap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002549

has super-properties
has start time valueap

start, years post birthap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002541

has super-properties
has start time valueap

subset_propertyap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#SubsetProperty

has sub-properties
common anatomyap, defined by inverseap, eco subsetap, efo slimap, human reference atlasap, pheno slimap, uberon slimap, upper levelap, valid_for_go_annotation_extensionap, valid_for_go_gp2termap, valid_for_go_ontologyap, valid_for_gocamap, vertebrate coreap

taxonomic class assertionap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002172

has super-properties
logical macro assertion on a classap
has sub-properties
ambiguous for taxonap, dubious for taxonap, never in taxonap, present in taxonap

temporal interpretationap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001900

has super-properties
logical macro assertion on an object propertyap

temporal logical macro assertion on a classap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0002535

has super-properties
logical macro assertion on a classap
has sub-properties
has developmental stage markerap, has end time valueap, has start time valueap, month of gestationap

term editorap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000117

term replaced byap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0100001

Add as annotation triples in the granting ontology

term tracker itemap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000233

The 'tracker item' can associate a tracker with a specific ontology term.

titleap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/title

titleap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/title

treat xrefs as equivalentap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-equivalent

treat xrefs as has subclassap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-has-subclass

treat xrefs as is aap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-is_a

treat xrefs as reverse genus differentiaap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-reverse-genus-differentia

uberon slimap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/uberon/core#uberon_slim

has super-properties
subset_propertyap

upper levelap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/uberon/core#upper_level

has super-properties
subset_propertyap

valid_for_go_annotation_extensionap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension

has super-properties
subset_propertyap

valid_for_go_gp2termap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/valid_for_go_gp2term

has super-properties
subset_propertyap

valid_for_go_ontologyap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/valid_for_go_ontology

has super-properties
subset_propertyap

valid_for_gocamap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/valid_for_gocam

has super-properties
subset_propertyap

vertebrate coreap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

has super-properties
subset_propertyap

General Axioms

General Subclass Definition back to ToC

causally influencesop some material entityc is subclass of

(participates inop some causally upstream of or withinop some processc) or (capable ofop some participates inop some causally upstream of or withinop some processc)

SWRL rules

Rule #1back to ToC

has componentop(?w,?p) , processc(?w) , processc(?p) -> has component processop(?w,?p)

Rule #2back to ToC

has characteristicop(?e,?d) , dispositionc(?d) -> has dispositionop(?e,?d)

Rule #3back to ToC

has characteristicop(?e,?d) , qualityc(?d) -> has qualityop(?e,?d)

Rule #4back to ToC

has characteristicop(?e,?d) , rolec(?d) -> has roleop(?e,?d)

Rule #5back to ToC

has characteristicop(?e,?d) , functionc(?d) -> has functionop(?e,?d)

Rule #6back to ToC

enablesop(?z,?y) , directly regulatesop(?x,?y) , gene product or complex activityc(?x) , gene product or complex activityc(?y) -> has inputop(?x,?z)

Rule #7back to ToC

gene product or complex activityc(?y) , enablesop(?x,?y) , has partop(?y,?z) -> enablesop(?x,?z)

Rule #8back to ToC

biological processc(?z) , part ofop(?y,?z) , enablesop(?x,?y) -> involved inop(?x,?z)

Rule #9back to ToC

directly regulatesop(?a1,?a2) , kinase activityc(?a1) , enabled byop(?a1,?g1) , enabled byop(?a2,?g2) -> phosphorylatesop(?g1,?g2)

Rule #10back to ToC

input ofop(?B,?C) , enabled byop(?A,?B) , has regulatory component activityop(?D,?C) -> directly regulatesop(?A,?D)

Rule #11back to ToC

input ofop(?B,?C) , enabled byop(?A,?B) , has negative regulatory component activityop(?D,?C) -> directly negatively regulatesop(?A,?D)

Rule #12back to ToC

input ofop(?B,?C) , enabled byop(?A,?B) , has positive regulatory component activityop(?D,?C) -> directly positively regulatesop(?A,?D)

Rule #13back to ToC

has inputop(?eff,?in) , has effector activityop(?mf,?eff) -> has inputop(?mf,?in)

Rule #14back to ToC

has inputop(?mf,?in) , has effector activityop(?mf,?eff) -> has inputop(?eff,?in)

Rule #15back to ToC

has effector activityop(?mf,?eff) , directly regulatesop(?mf,?mf2) -> directly regulatesop(?eff,?mf2)

Rule #16back to ToC

directly positively regulatesop(?mf,?mf2) , has effector activityop(?mf,?eff) -> directly positively regulatesop(?eff,?mf2)

Rule #17back to ToC

has effector activityop(?mf,?eff) , directly negatively regulatesop(?mf,?mf2) -> directly negatively regulatesop(?eff,?mf2)

Rule #18back to ToC

causally downstream ofop(?x,?y) , overlapsop(?x,?y) -> nothing(?x) , nothing(?y)

Rule #19back to ToC

causally upstream ofop(?x,?y) , overlapsop(?x,?y) -> nothing(?x) , nothing(?y)

Rule #20back to ToC

indirectly causally upstream ofop(?p,?q) , regulatesop(?p,?q) -> indirectly regulatesop(?p,?q)

Rule #21back to ToC

positively regulatesop(?y,?z) , negatively regulatesop(?x,?y) -> negatively regulatesop(?x,?z)

Rule #22back to ToC

negatively regulates characteristicop(?y,?z) , negatively regulatesop(?x,?y) -> positively regulates characteristicop(?x,?z)

Rule #23back to ToC

positively regulatesop(?x,?y) , negatively regulatesop(?y,?z) -> negatively regulatesop(?x,?z)

Rule #24back to ToC

acts upstream of or withinop(?x,?y) , causally upstream ofop(?y,?z) -> acts upstream ofop(?x,?z)

Rule #25back to ToC

causally upstream ofop(?q,?u) , causally upstream ofop(?p,?q) -> indirectly causally upstream ofop(?p,?u)

Namespace Declarations back to ToC

default namespace
http://purl.obolibrary.org/obo/ro.owl#
10-1002
https://doi.org/10.1002/
10-1006
http://dx.doi.org/10.1006/
10-1007
http://dx.doi.org/10.1007/
10-1016
http://dx.doi.org/10.1016/
10-1021
https://doi.org/10.1021/
10-1038
http://dx.doi.org/10.1038/
10-1046
http://dx.doi.org/10.1046/
10-1073
http://dx.doi.org/10.1073/
10-1101
http://dx.doi.org/10.1101/
10-1126
http://dx.doi.org/10.1126/
10-1146
http://dx.doi.org/10.1146/
10-1186
http://dx.doi.org/10.1186/
10-3390
https://doi.org/10.3390/
2024-04-24
http://purl.obolibrary.org/obo/ro/releases/2024-04-24/
225
https://github.com/jhpoelen/eol-globi-data/issues/225#
27
http://biorxiv.org/content/early/2014/06/27/
cito
http://purl.org/spar/cito/
compara
http://www.ensembl.org/info/docs/compara/
core
http://purl.obolibrary.org/obo/uberon/core#
dc
http://purl.org/dc/elements/1.1/
doap
http://usefulinc.com/ns/doap#
docs
http://purl.obolibrary.org/obo/ro/docs/
entity
http://www.wikidata.org/entity/
envo
http://purl.obolibrary.org/obo/envo#
foaf
http://xmlns.com/foaf/0.1/
index-php
http://wiki.geneontology.org/index.php/
issues
https://github.com/ontodev/robot/issues/
molbev
http://dx.doi.org/10.1093/molbev/
nar
http://dx.doi.org/10.1093/nar/
obo
http://purl.obolibrary.org/obo/
obo-syntax-html
http://owlcollab.github.io/oboformat/doc/obo-syntax.html#
oboInOwl
http://www.geneontology.org/formats/oboInOwl#
ontology
http://dbpedia.org/ontology/
orcid-org
https://orcid.org/
ordo
http://www.orpha.net/ORDO/
owl
http://www.w3.org/2002/07/owl#
page
http://www.geneontology.org/page/
parasitism
https://en.wikipedia.org/wiki/Parasitism#
property
http://dbpedia.org/property/
pubmed
http://www.ncbi.nlm.nih.gov/pubmed/
rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#
rdfs
http://www.w3.org/2000/01/rdf-schema#
ro-metamodel
http://purl.obolibrary.org/obo/ro/ro-metamodel/
robot-obolibrary-org
http://robot.obolibrary.org/
skos
http://www.w3.org/2004/02/skos/core#
subsets
http://purl.obolibrary.org/obo/ro/subsets#
swrl
http://www.w3.org/2003/11/swrl#
swrla
http://swrl.stanford.edu/ontologies/3.3/swrla.owl#
swrlb
http://www.w3.org/2003/11/swrlb#
terms
http://purl.org/dc/terms/
wiki
https://github.com/obophenotype/uberon/wiki/
wiki-geneontology-org
https://wiki.geneontology.org/
xsd
http://www.w3.org/2001/XMLSchema#

This HTML document was obtained by processing the OWL ontology source code through LODE, Live OWL Documentation Environment, developed by Silvio Peroni .