Pathogen Transmission Ontology

IRI:
http://purl.obolibrary.org/obo/trans.owl
Version IRI:
http://purl.obolibrary.org/obo/trans/releases/2020-08-04/trans.owl
Other visualisation:
Ontology source

Abstract

Table of Content

  1. Introduction
  2. Classes
  3. Annotation Properties
  4. Namespace Declarations

Introduction

The Pathogen Transmission Ontology describes the tranmission methods of human disease pathogens describing how a pathogen is transmitted from one host, reservoir, or source to another host. The pathogen transmission may occur either directly or indirectly and may involve animate vectors or inanimate vehicles.

Classes

airborne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000009

has super-classes
indirect transmissionc

Anopheles gambiae borne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000022

has super-classes
mosquito borne transmissionc

arachnid borne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000027

has super-classes
arthropod borne transmissionc
has sub-classes
tick borne transmissionc

arthropod borne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000019

has super-classes
vector-borne transmissionc
has sub-classes
arachnid borne transmissionc, insect borne transmissionc

biologic transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000015

has super-classes
vector-borne transmissionc
has sub-classes
cyclodevelopmental transmissionc, cyclopropagative transmissionc, propagative transmissionc, trans-stadial transmissionc, transovarial transmissionc, veneral transmissionc, vertical transmissionc

congenital transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000006

has super-classes
direct transmissionc
has sub-classes
placental transmissionc

contact transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000007

has super-classes
direct transmissionc

copepod borne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000025

has super-classes
vector-borne transmissionc
has sub-classes
Dracunculus medinensis borne transmissionc

cyclodevelopmental transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000030

has super-classes
biologic transmissionc

cyclopropagative transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000029

has super-classes
biologic transmissionc

direct transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000001

has super-classes
transmission processc
has sub-classes
congenital transmissionc, contact transmissionc, droplet spread transmissionc

Dracunculus medinensis borne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000026

has super-classes
copepod borne transmissionc

droplet spread transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000008

has super-classes
direct transmissionc

flea borne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000023

has super-classes
insect borne transmissionc

indirect transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000002

has super-classes
transmission processc
has sub-classes
airborne transmissionc, vector-borne transmissionc, vehicle-borne transmissionc

insect borne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000020

has super-classes
arthropod borne transmissionc
has sub-classes
flea borne transmissionc, mosquito borne transmissionc

mechanical transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000003

has super-classes
vector-borne transmissionc

mosquito borne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000021

has super-classes
insect borne transmissionc
has sub-classes
Anopheles gambiae borne transmissionc

obsolete not curatedc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000017

obsolete undocumentedc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000016

obsolete unknownc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000004

placental transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000018

has super-classes
congenital transmissionc

propagative transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000028

has super-classes
biologic transmissionc

tick borne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000024

has super-classes
arachnid borne transmissionc

trans-stadial transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000033

has super-classes
biologic transmissionc

transmission processc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000000

has sub-classes
direct transmissionc, indirect transmissionc

transovarial transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000031

has super-classes
biologic transmissionc

vector-borne bite transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000014

has super-classes
vector-borne transmissionc

vector-borne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000005

has super-classes
indirect transmissionc
has sub-classes
arthropod borne transmissionc, biologic transmissionc, copepod borne transmissionc, mechanical transmissionc, vector-borne bite transmissionc

vehicle-borne fomite transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000011

has super-classes
vehicle-borne transmissionc

vehicle-borne ingestion transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000012

has super-classes
vehicle-borne transmissionc

vehicle-borne medical transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000013

has super-classes
vehicle-borne transmissionc

vehicle-borne transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000010

has super-classes
indirect transmissionc
has sub-classes
vehicle-borne fomite transmissionc, vehicle-borne ingestion transmissionc, vehicle-borne medical transmissionc

veneral transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000034

has super-classes
biologic transmissionc

vertical transmissionc back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/TRANS_0000032

has super-classes
biologic transmissionc

Annotation Properties

auto generated byap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#auto-generated-by

database_cross_referenceap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#hasDbXref

dateap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#date

default namespaceap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#default-namespace

definitionap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000115

deprecatedap back to ToC or Annotation Property ToC

IRI: http://www.w3.org/2002/07/owl#deprecated

descriptionap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/description

has_exact_synonymap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#hasExactSynonym

has_obo_format_versionap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion

has_obo_namespaceap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#hasOBONamespace

idap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#id

labelap back to ToC or Annotation Property ToC

IRI: http://www.w3.org/2000/01/rdf-schema#label

licenseap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/license

saved byap back to ToC or Annotation Property ToC

IRI: http://www.geneontology.org/formats/oboInOwl#saved-by

titleap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/title

Namespace Declarations back to ToC

default namespace
http://purl.obolibrary.org/obo/trans.owl#
2020-08-04
http://purl.obolibrary.org/obo/trans/releases/2020-08-04/
dc
http://purl.org/dc/elements/1.1/
obo
http://purl.obolibrary.org/obo/
oboInOwl
http://www.geneontology.org/formats/oboInOwl#
owl
http://www.w3.org/2002/07/owl#
rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#
rdfs
http://www.w3.org/2000/01/rdf-schema#
terms
http://purl.org/dc/terms/
xsd
http://www.w3.org/2001/XMLSchema#

This HTML document was obtained by processing the OWL ontology source code through LODE, Live OWL Documentation Environment, developed by Silvio Peroni.