UniProt RDF schema ontology

Classes ↑

Absorption
Active Site
Activity Regulation
Allergen
Alternative Initiation
Alternative Products
Alternative Promoter Usage
Splice Variant
Alternative Splicing
Annotation
Attribution
Strand
Binding Site
Biophysicochemical Property
Biotechnology
Book Citation
Calcium Binding
Catalytic Activity
Catalytic Activity Annotation
Caution
Cellular Component
Chain
Citation
Citation Statement
Cluster (UniRef)
Cofactor
Coiled-Coil
Compositionally Biased Region
Concept
Crosslink
DNA
Database (description of)
Developmental Stage
Disease
Disease Annotation
Disruption Phenotype
Disulfide Bond
Domain
Domain Assignment Statement
Domain Extent
Electronic Citation
Endpoint Statement
Enzyme
Enzyme Regulation
Erroneous Gene Model Prediction
Erroneous Initiation
Erroneous Termination
Erroneous Translation
Experimental Information
External Sequence
Family Membership Statement
Frameshift
Function
Gene
Genomic DNA
Genomic RNA
Glycosylation Site
Helix
Induction
Initiator Methionine
Interaction
INTRAMEM
Journal
Journal Citation
Kinetics
Known Sequence
Lipid Binding
mRNA
Mass Measurement
Mass
Member Of Redudant Proteome
Metal Ion Binding Site
Method
Modification
Modified Residue
Modified Sequence
Molecule
Molecule Processing
Motif
Mutagenesis Site
Nucleotide Phosphate Binding
Sequence Variant
Natural Variation
Non-consecutive Residues
Non standard residue
Non-terminal Residue
Non self interaction
Not Obsolete
Not obsolete protein (record)
Not obsolete taxon (record)
DNA Binding
Nucleotide Mapping Statement
Nucleotide Resource
Observation Citation
Obsolete
Obsolete Protein
Obsolete Taxon
Organelle
Orientation
Other DNA
Other RNA
pH Dependence
PTM
Protein part
Interaction participant
Patent Citation
Pathway
Pathway annotation
Peptide
Pharmaceutical
Plasmid
Polymorphism
Propeptide
Protein
Protein existence evidence
Proteome
Proteome_Component
Published Citation
RNA
RNA Editing
Taxon rank
Redox Potential
Reference_Proteome
Region
Repeat
Representative_Proteome
Resource
Reviewed
Reviewed protein (records)
Ribosomal Frameshifting
Secondary Structure
Self protein interaction
Sequence
Sequence Annotation
Sequence Caution
Sequence Conflict
Unsure Residue
Signal Peptide
Similarity
Simple Sequence
Site
Status
Strain
Structure Determination
Structure Mapping Statement
Structure Resource
Structured_Name
Subcellular Location
Subcellular Location Annotation
Submission Citation
Subunit
Taxon
Temperature Dependence
Thesis Citation
Tissue
Tissue Specificity
Topological Domain
Topology
Toxic Dose
Transcribed RNA
Transcript Resource
Transit Peptide
Transmembrane
Transposon
Turn
Unassigned DNA
Unassigned RNA
Unknown Sequence
Unpublished Citation
Viral cRNA
Zinc Finger
rdf:Statement
rdfs:Resource
owl:Class
owl:Thing
skos:Concept
foaf:Image

Absorption^c # Classes

URI	`http://purl.uniprot.org/core/Absorption_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicates the wavelength in nm at which photoreactive proteins such as opsins and DNA photolyases show maximal absorption.
Super-classes	Biophysicochemical Property^c
In domain of	maximum^fp certain^fp

Active Site^c # Classes

URI	`http://purl.uniprot.org/core/Active_Site_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Amino acid(s) involved in the activity of an enzyme.
Super-classes	Site^c

Activity Regulation^c # Classes

URI	`http://purl.uniprot.org/core/Activity_Regulation_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of an enzyme, transporter and microbial transcription regulation mechanism.
Super-classes	Annotation^c

Allergen^c # Classes

URI	`http://purl.uniprot.org/core/Allergen_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Information relevant to allergenic proteins.
Super-classes	Annotation^c

Alternative Initiation^c # Classes

URI	`http://purl.uniprot.org/core/Alternative_Initiation_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Alternative Products^c

Alternative Products^c # Classes

URI	`http://purl.uniprot.org/core/Alternative_Products_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the existence of related protein sequences produced by alternative splicing of the same gene or by the use of alternative initiation codons.
Super-classes	Annotation^c
Sub-classes	Alternative Splicing^c Alternative Initiation^c Alternative Promoter Usage^c Ribosomal Frameshifting^c

Alternative Promoter Usage^c # Classes

URI	`http://purl.uniprot.org/core/Alternative_Promoter_Usage_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Alternative Products^c

Splice Variant^c # Classes

URI	`http://purl.uniprot.org/core/Alternative_Sequence_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of sequence variants produced by alternative splicing.
Super-classes	Natural Variation^c
In range of	modification^op

Alternative Splicing^c # Classes

URI	`http://purl.uniprot.org/core/Alternative_Splicing_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Alternative Products^c

Annotation^c # Classes

URI	`http://purl.uniprot.org/core/Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of a resource on a specific topic.
Sub-classes	Allergen^c Domain^c Polymorphism^c Biotechnology^c Activity Regulation^c Tissue Specificity^c Cofactor^c Catalytic Activity Annotation^c Pathway annotation^c Pharmaceutical^c Sequence Annotation^c Subcellular Location Annotation^c Function^c Alternative Products^c Sequence Caution^c Biophysicochemical Property^c PTM^c Disruption Phenotype^c Disease Annotation^c Induction^c RNA Editing^c Developmental Stage^c Similarity^c Caution^c Subunit^c Toxic Dose^c
In range of	mapped annotation^op annotation^op

Attribution^c # Classes

URI	`http://purl.uniprot.org/core/Attribution`
Is Defined By	http://purl.uniprot.org/core/
Description	Entity used to attach evidence or provenance to a rdf statement via reification.
In domain of	source^op manual^fp
In range of	attribution^op

Strand^c # Classes

URI	`http://purl.uniprot.org/core/Beta_Strand_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Beta strand regions within the experimentally determined protein structure
Super-classes	Secondary Structure^c

Binding Site^c # Classes

URI	`http://purl.uniprot.org/core/Binding_Site_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Binding site for any chemical group (co-enzyme, prosthetic group, etc.).
Super-classes	Site^c

Biophysicochemical Property^c # Classes

URI	`http://purl.uniprot.org/core/Biophysicochemical_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Biophysical and physicochemical data such as pH dependence, temperature dependence, kinetic parameters, redox potentials, and maximal absorption.
Super-classes	Annotation^c
Sub-classes	pH Dependence^c Temperature Dependence^c Absorption^c Kinetics^c Redox Potential^c

Biotechnology^c # Classes

URI	`http://purl.uniprot.org/core/Biotechnology_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the use of a specific protein in a biotechnological process.
Super-classes	Annotation^c

Book Citation^c # Classes

URI	`http://purl.uniprot.org/core/Book_Citation`
Is Defined By	http://purl.uniprot.org/core/
Description	A chapter from a book.
Super-classes	Published Citation^c
Restrictions	name^dp exactly 1
In domain of	editor^dp publisher^dp

Calcium Binding^c # Classes

URI	`http://purl.uniprot.org/core/Calcium_Binding_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a calcium-binding region.
Super-classes	Region^c

Catalytic Activity^c # Classes

URI	`http://purl.uniprot.org/core/Catalytic_Activity`
Is Defined By	http://purl.uniprot.org/core/
Description	The catalytic activity of an enzyme.
In domain of	catalyzed reaction^op enzyme class^op
In range of	catalytic activity^op catalytic activity^op

Catalytic Activity Annotation^c # Classes

URI	`http://purl.uniprot.org/core/Catalytic_Activity_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the reactions catalyzed by an enzyme.
Super-classes	Annotation^c
In domain of	catalyzed physiological reaction^op catalytic activity^op

Caution^c # Classes

URI	`http://purl.uniprot.org/core/Caution_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Warning about possible errors and/or grounds for confusion.
Super-classes	Annotation^c

Cellular Component^c # Classes

URI	`http://purl.uniprot.org/core/Cellular_Component`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Subcellular Location^c
In range of	cellular component^op

Chain^c # Classes

URI	`http://purl.uniprot.org/core/Chain_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a polypeptide chain in the mature protein.
Super-classes	Molecule Processing^c

Citation^c # Classes

URI	`http://purl.uniprot.org/core/Citation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of a publication from which data was obtained.
Super-classes	(ub2676bL222C22^c or ub2676bL227C13^c or ub2676bL232C13^c)
Sub-classes	Unpublished Citation^c Published Citation^c
In domain of	locator^dp author^dp title^fp group^dp authorsIncomplete^dp published in^op
In range of	citation^op mapped citation^op

Citation Statement^c # Classes

URI	`http://purl.uniprot.org/core/Citation_Statement`
Is Defined By	http://purl.uniprot.org/core/
Description	The relationship between a resource and a citation.
Super-classes	rdf:Statement^c
Restrictions	context^op only (Strain^c or Tissue^c or Transposon^c)
In domain of	context^op scope^dp

Cluster (UniRef)^c # Classes

URI	`http://purl.uniprot.org/core/Cluster`
Is Defined By	http://purl.uniprot.org/core/
Description	Cluster of proteins with similar sequences.
Super-classes	owl:Thing^c
Restrictions	member^op only Sequence^c
In domain of	some members classified with^op identity^fp common taxon^op member^op
In range of	seed for^op member of^op representative for^op

Cofactor^c # Classes

URI	`http://purl.uniprot.org/core/Cofactor_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of an enzyme cofactor.
Super-classes	Annotation^c
In domain of	cofactor^op

Coiled-Coil^c # Classes

URI	`http://purl.uniprot.org/core/Coiled_Coil_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a coiled-coil region.
Super-classes	Region^c

Compositionally Biased Region^c # Classes

URI	`http://purl.uniprot.org/core/Compositional_Bias_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a compositionally biased region.
Super-classes	Region^c

Concept^c # Classes

URI	`http://purl.uniprot.org/core/Concept`
Is Defined By	http://purl.uniprot.org/core/
Description	A concept used to classify resources.
Super-classes	owl:Class^c
Restrictions	replaces^op only Concept^c
In range of	classified with^op

Crosslink^c # Classes

URI	`http://purl.uniprot.org/core/Cross-link_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Posttranslationally formed amino acid bonds.
Super-classes	Modification^c

DNA^c # Classes

URI	`http://purl.uniprot.org/core/DNA`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Molecule^c
Sub-classes	Genomic DNA^c Unassigned DNA^c Other DNA^c

Database (description of)^c # Classes

URI	`http://purl.uniprot.org/core/Database`
Is Defined By	http://purl.uniprot.org/core/
Description	Metadata for a life science database.
Super-classes	owl:Class^c
In domain of	link is explicit^dp URI template^dp category^op abstract^fp URL pattern^fp implicit^fp URL template^dp curated^dp
In range of	database^op

Developmental Stage^c # Classes

URI	`http://purl.uniprot.org/core/Developmental_Stage_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the developmentally-specific expression of a protein.
Super-classes	Annotation^c

Disease^c # Classes

URI	`http://purl.uniprot.org/core/Disease`
Is Defined By	http://purl.uniprot.org/core/
In range of	disease^op

Disease Annotation^c # Classes

URI	`http://purl.uniprot.org/core/Disease_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the diseases associated with a deficiency of a protein.
Super-classes	Annotation^c
In domain of	disease^op

Disruption Phenotype^c # Classes

URI	`http://purl.uniprot.org/core/Disruption_Phenotype_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Annotation^c

Disulfide Bond^c # Classes

URI	`http://purl.uniprot.org/core/Disulfide_Bond_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Describes residues which are linked by an intra-chain disulfide bond. If the endpoints are identical, the disulfide bond is an interchain one.
Super-classes	Modification^c

Domain^c # Classes

URI	`http://purl.uniprot.org/core/Domain_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the domain structure of a protein.
Super-classes	Annotation^c

Domain Assignment Statement^c # Classes

URI	`http://purl.uniprot.org/core/Domain_Assignment_Statement`
Is Defined By	http://purl.uniprot.org/core/
Description	The relationship between a protein and a protein domain.
Super-classes	rdf:Statement^c

Domain Extent^c # Classes

URI	`http://purl.uniprot.org/core/Domain_Extent_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.
Super-classes	Region^c

Electronic Citation^c # Classes

URI	`http://purl.uniprot.org/core/Electronic_Citation`
Is Defined By	http://purl.uniprot.org/core/
Description	An electronic publication.
Super-classes	Published Citation^c
Restrictions	name^dp exactly 1

Endpoint Statement^c # Classes

URI	`http://purl.uniprot.org/core/Endpoint_Statement`
Is Defined By	http://purl.uniprot.org/core/
Description	Metadata for an endpoint of a range on a sequence.
Super-classes	rdf:Statement^c

Enzyme^c # Classes

URI	`http://purl.uniprot.org/core/Enzyme`
Is Defined By	http://purl.uniprot.org/core/
Description	A specific catalytic activity, defined by the Enzyme Commission of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (IUBMB).
Restrictions	replaced by^op only Enzyme^c replaces^op only Enzyme^c
In domain of	cofactorLabel^dp catalytic activity^op
In range of	enzyme^op enzyme class^op

Enzyme Regulation^c # Classes

URI	`http://purl.uniprot.org/core/Enzyme_Regulation_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	The use of this class has been replaced by Activity_Regulation_Annotation

Erroneous Gene Model Prediction^c # Classes

URI	`http://purl.uniprot.org/core/Erroneous_Gene_Model_Prediction_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Sequence Caution^c

Erroneous Initiation^c # Classes

URI	`http://purl.uniprot.org/core/Erroneous_Initiation_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Sequence Caution^c

Erroneous Termination^c # Classes

URI	`http://purl.uniprot.org/core/Erroneous_Termination_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Sequence Caution^c

Erroneous Translation^c # Classes

URI	`http://purl.uniprot.org/core/Erroneous_Translation_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Sequence Caution^c

Experimental Information^c # Classes

URI	`http://purl.uniprot.org/core/Experimental_Information_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Sequence Annotation^c
Sub-classes	Sequence Conflict^c Non-terminal Residue^c Unsure Residue^c Mutagenesis Site^c Mass^c Non-consecutive Residues^c

External Sequence^c # Classes

URI	`http://purl.uniprot.org/core/External_Sequence`
Is Defined By	http://purl.uniprot.org/core/
Description	The protein described in the linked record is an alternative splice form of the same gene product as described in this record. The function between the two isoforms is highly divergent.
Super-classes	Known Sequence^c
In domain of	translated from^op
In range of	conflicting sequence^op

Family Membership Statement^c # Classes

URI	`http://purl.uniprot.org/core/Family_Membership_Statement`

Frameshift^c # Classes

URI	`http://purl.uniprot.org/core/Frameshift_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Sequence Caution^c

Function^c # Classes

URI	`http://purl.uniprot.org/core/Function_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	General description of the functions of a protein.
Super-classes	Annotation^c

Gene^c # Classes

URI	`http://purl.uniprot.org/core/Gene`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	skos:Concept^c owl:Thing^c
Restrictions	skos:prefLabel^op exactly 1 Gene^c
In domain of	ORF name^dp locus name^op
In range of	encoded by^op

Genomic DNA^c # Classes

URI	`http://purl.uniprot.org/core/Genomic_DNA`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	DNA^c

Genomic RNA^c # Classes

URI	`http://purl.uniprot.org/core/Genomic_RNA`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	RNA^c

Glycosylation Site^c # Classes

URI	`http://purl.uniprot.org/core/Glycosylation_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Describes the occurrence of the attachment of a glycan (mono- or polysaccharide) to a residue of a protein.
Super-classes	Modification^c

Helix^c # Classes

URI	`http://purl.uniprot.org/core/Helix_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Helical regions within the experimentally determined protein structure
Super-classes	Secondary Structure^c

Induction^c # Classes

URI	`http://purl.uniprot.org/core/Induction_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the compounds or conditions that stimulate the synthesis of a protein.
Super-classes	Annotation^c

Initiator Methionine^c # Classes

URI	`http://purl.uniprot.org/core/Initiator_Methionine_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicates that the initiator methionine has been cleaved off and is not shown in the sequence.
Super-classes	Molecule Processing^c

Interaction^c # Classes

URI	`http://purl.uniprot.org/core/Interaction`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of a protein-protein interaction.
Sub-classes	Non self interaction^c Self protein interaction^c
In domain of	participant^op experiments^fp negative^fp xeno^fp
In range of	interaction^op

INTRAMEM^c # Classes

URI	`http://purl.uniprot.org/core/Intramembrane_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a region located in a membrane without crossing it
Super-classes	Region^c

Journal^c # Classes

URI	`http://purl.uniprot.org/core/Journal`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	owl:Thing^c
In domain of	shortCoden^dp
In range of	published in^op

Journal Citation^c # Classes

URI	`http://purl.uniprot.org/core/Journal_Citation`
Is Defined By	http://purl.uniprot.org/core/
Description	An article published in a journal.
Super-classes	Published Citation^c
Restrictions	name^dp exactly 1

Kinetics^c # Classes

URI	`http://purl.uniprot.org/core/Kinetics_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Mentions the Michaelis-Menten constant (KM) and maximal velocity (Vmax) of enzymes.
Super-classes	Biophysicochemical Property^c
In domain of	measured affinity^dp measured activity^dp

Known Sequence^c # Classes

URI	`http://purl.uniprot.org/core/Known_Sequence`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Sequence^c
Sub-classes	External Sequence^c Modified Sequence^c Simple Sequence^c

Lipid Binding^c # Classes

URI	`http://purl.uniprot.org/core/Lipidation_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Covalent binding of a lipid moiety.
Super-classes	Modification^c

mRNA^c # Classes

URI	`http://purl.uniprot.org/core/MRNA`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	RNA^c

Mass Measurement^c # Classes

URI	`http://purl.uniprot.org/core/Mass_Measurement_Method`
Is Defined By	http://purl.uniprot.org/core/
Description	An experimental method for measuring the mass of a molecule.
Super-classes	Method^c
Members	API SELDI FAB PD LSIMS ESI MALDI

Mass^c # Classes

URI	`http://purl.uniprot.org/core/Mass_Spectrometry_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicates the mass of a sequence determined by mass spectrometry.
Super-classes	Experimental Information^c
Restrictions	method^op max 1 method^op only Mass Measurement^c
In domain of	measured error^fp measured value^fp

Member Of Redudant Proteome^c # Classes

URI	`http://purl.uniprot.org/core/Member_Of_Redudant_Proteome`
Is Defined By	http://purl.uniprot.org/core/
Description	This entry was obsoleted because its sequence belongs to a redundant protoeome
Super-classes	Obsolete Protein^c

Metal Ion Binding Site^c # Classes

URI	`http://purl.uniprot.org/core/Metal_Binding_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Binding site for a metal ion.
Super-classes	Site^c

Method^c # Classes

URI	`http://purl.uniprot.org/core/Method`
Is Defined By	http://purl.uniprot.org/core/
Description	An experimental method.
Sub-classes	Mass Measurement^c Structure Determination^c
In range of	method^op

Modification^c # Classes

URI	`http://purl.uniprot.org/core/Modification_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Describes amino acid modifications, post pre- and post-translational.
Super-classes	Sequence Annotation^c
Sub-classes	Modified Residue^c Crosslink^c Lipid Binding^c Glycosylation Site^c Non standard residue^c Disulfide Bond^c

Modified Residue^c # Classes

URI	`http://purl.uniprot.org/core/Modified_Residue_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Posttranslational modification of a residue.
Super-classes	Modification^c

Modified Sequence^c # Classes

URI	`http://purl.uniprot.org/core/Modified_Sequence`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Known Sequence^c
Restrictions	based on^op only Simple Sequence^c modification^op only Splice Variant^c
In domain of	based on^op modification^op

Molecule^c # Classes

URI	`http://purl.uniprot.org/core/Molecule`
Is Defined By	http://purl.uniprot.org/core/
Description	A biological molecule.
Sub-classes	DNA^c RNA^c
In range of	located on^op

Molecule Processing^c # Classes

URI	`http://purl.uniprot.org/core/Molecule_Processing_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Sequence Annotation^c
Sub-classes	Transit Peptide^c Propeptide^c Peptide^c Chain^c Initiator Methionine^c Signal Peptide^c

Motif^c # Classes

URI	`http://purl.uniprot.org/core/Motif_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Short (<=20 amino acids) sequence motif of biological interest.
Super-classes	Region^c

Mutagenesis Site^c # Classes

URI	`http://purl.uniprot.org/core/Mutagenesis_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Site which has been experimentally altered.
Super-classes	Experimental Information^c

Nucleotide Phosphate Binding^c # Classes

URI	`http://purl.uniprot.org/core/NP_Binding_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a nucleotide phosphate-binding region.
Super-classes	Region^c

Sequence Variant^c # Classes

URI	`http://purl.uniprot.org/core/Natural_Variant_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Authors report that sequence variants exist.
Super-classes	Natural Variation^c

Natural Variation^c # Classes

URI	`http://purl.uniprot.org/core/Natural_Variation_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Sequence Annotation^c
Sub-classes	Sequence Variant^c Splice Variant^c

Non-consecutive Residues^c # Classes

URI	`http://purl.uniprot.org/core/Non-adjacent_Residues_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicates that two residues in a sequence are not consecutive and that there are a number of unsequenced residues between them.
Super-classes	Experimental Information^c

Non standard residue^c # Classes

URI	`http://purl.uniprot.org/core/Non-standard_Residue_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Describes the occurrence of a non standard residue in the sequence record.
Super-classes	Modification^c

Non-terminal Residue^c # Classes

URI	`http://purl.uniprot.org/core/Non-terminal_Residue_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	The residue at an extremity of the sequence is not the terminal residue.
Super-classes	Experimental Information^c

Non self interaction^c # Classes

URI	`http://purl.uniprot.org/core/Non_Self_Interaction`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of a non self protein-protein interaction.
Super-classes	Interaction^c

Not Obsolete^c # Classes

URI	`http://purl.uniprot.org/core/Not_Obsolete`
Is Defined By	http://purl.uniprot.org/core/
Description	A class introduced to group all records that are currently in the database.
Sub-classes	Not obsolete taxon (record)^c Not obsolete protein (record)^c

Not obsolete protein (record)^c # Classes

URI	`http://purl.uniprot.org/core/Not_Obsolete_Protein`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Protein^c Not Obsolete^c
Restrictions	sequence^op some Simple Sequence^c organism^op exactly 1 existence^op some Protein existence evidence^c

Not obsolete taxon (record)^c # Classes

URI	`http://purl.uniprot.org/core/Not_Obsolete_Taxon`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Taxon^c Not Obsolete^c
Restrictions	scientific name^fp exactly 1

DNA Binding^c # Classes

URI	`http://purl.uniprot.org/core/Nucleotide_Binding_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a DNA-binding region.
Super-classes	Region^c

Nucleotide Mapping Statement^c # Classes

URI	`http://purl.uniprot.org/core/Nucleotide_Mapping_Statement`
Is Defined By	http://purl.uniprot.org/core/
Description	The relationship between a protein and a nucleotide sequence.
Super-classes	rdf:Statement^c

Nucleotide Resource^c # Classes

URI	`http://purl.uniprot.org/core/Nucleotide_Resource`
Is Defined By	http://purl.uniprot.org/core/
Description	A resource that descripes a nucleotide sequence.
Super-classes	Resource^c
In domain of	sequence discrepancy^op located on^op
In range of	nucleotideSequenceMappingIssue^op translated from^op

Observation Citation^c # Classes

URI	`http://purl.uniprot.org/core/Observation_Citation`
Is Defined By	http://purl.uniprot.org/core/
Description	Citation of an unpublished result.
Super-classes	Unpublished Citation^c

Obsolete^c # Classes

URI	`http://purl.uniprot.org/core/Obsolete`
Is Defined By	http://purl.uniprot.org/core/
Description	The class of all obsolete records in the database (i.e. records that where once published but are now removed).
Sub-classes	Obsolete Protein^c Obsolete Taxon^c

Obsolete Protein^c # Classes

URI	`http://purl.uniprot.org/core/Obsolete_Protein`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Obsolete^c Protein^c
Sub-classes	Member Of Redudant Proteome^c

Obsolete Taxon^c # Classes

URI	`http://purl.uniprot.org/core/Obsolete_Taxon`
Is Defined By	http://purl.uniprot.org/core/
Description	Taxa are occasionally removed from the taxonomy database (particularly internal nodes, during a taxonomic revision) – these taxids are deleted, and are not reused.
Super-classes	Obsolete^c Taxon^c

Organelle^c # Classes

URI	`http://purl.uniprot.org/core/Organelle`
Is Defined By	http://purl.uniprot.org/core/
Members	Cyanelle Mitochondrion Non-photosynthetic_plastid Organellar_chromatophore Chloroplast Nucleomorph Hydrogenosome Plastid Apicoplast

Orientation^c # Classes

URI	`http://purl.uniprot.org/core/Orientation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Subcellular Location^c
In range of	orientation^op

Other DNA^c # Classes

URI	`http://purl.uniprot.org/core/Other_DNA`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	DNA^c

Other RNA^c # Classes

URI	`http://purl.uniprot.org/core/Other_RNA`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	RNA^c

pH Dependence^c # Classes

URI	`http://purl.uniprot.org/core/PH_Dependence_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Describes the optimum pH for enzyme activity and/or the variation of enzyme activity with pH variation.
Super-classes	Biophysicochemical Property^c

PTM^c # Classes

URI	`http://purl.uniprot.org/core/PTM_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of a posttranslational modification.
Super-classes	Annotation^c

Protein part^c # Classes

URI	`http://purl.uniprot.org/core/Part`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of a part of a protein.
Super-classes	owl:Thing^c
In range of	proteome component^op domain^op part^op

Interaction participant^c # Classes

URI	`http://purl.uniprot.org/core/Participant`
Is Defined By	http://purl.uniprot.org/core/
Description	A participant in a protein-protein interaction.
In range of	participant^op

Patent Citation^c # Classes

URI	`http://purl.uniprot.org/core/Patent_Citation`
Is Defined By	http://purl.uniprot.org/core/
Description	A patent application.
Super-classes	Published Citation^c

Pathway^c # Classes

URI	`http://purl.uniprot.org/core/Pathway`
Is Defined By	http://purl.uniprot.org/core/
Description	A hierarchical discription of a metabolic pathway.

Pathway annotation^c # Classes

URI	`http://purl.uniprot.org/core/Pathway_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the metabolic pathways with which a protein is associated.
Super-classes	Annotation^c

Peptide^c # Classes

URI	`http://purl.uniprot.org/core/Peptide_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a released active peptide.
Super-classes	Molecule Processing^c

Pharmaceutical^c # Classes

URI	`http://purl.uniprot.org/core/Pharmaceutical_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the use of a protein as a pharmaceutical drug.
Super-classes	Annotation^c

Plasmid^c # Classes

URI	`http://purl.uniprot.org/core/Plasmid`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of a Plasmid

Polymorphism^c # Classes

URI	`http://purl.uniprot.org/core/Polymorphism_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of polymorphisms.
Super-classes	Annotation^c

Propeptide^c # Classes

URI	`http://purl.uniprot.org/core/Propeptide_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a propeptide.
Super-classes	Molecule Processing^c

Protein^c # Classes

URI	`http://purl.uniprot.org/core/Protein`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of a protein.
Super-classes	owl:Thing^c
Restrictions	replaced by^op only Protein^c replaces^op only Protein^c
Sub-classes	Obsolete Protein^c Not obsolete protein (record)^c Reviewed protein (records)^c
In domain of	old mnemonic^dp domain^op isolatedFrom^op proteome component^op encoded by^op mapped citation^op encoded in^op existence^op potential sequence^op chainSequenceMapping^op annotation^op interaction^op classified with^op

Protein existence evidence^c # Classes

URI	`http://purl.uniprot.org/core/Protein_Existence`
Is Defined By	http://purl.uniprot.org/core/
Members	Evidence_at_Protein_Level_Existence Evidence_at_Transcript_Level_Existence Uncertain_Existence Predicted_Existence Inferred_from_Homology_Existence

Proteome^c # Classes

URI	`http://purl.uniprot.org/core/Proteome`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of a proteome.
Sub-classes	Representative_Proteome^c Reference_Proteome^c
In domain of	proteome exclusion reason^dp panproteome^op
In range of	panproteome^op redundantTo^op

Proteome_Component^c # Classes

URI	`http://purl.uniprot.org/core/Proteome_Component`
Is Defined By	http://purl.uniprot.org/core/
Description	The component of a proteome. e.g. Chromosome, Contig or Plasmid
Super-classes	owl:Thing^c

Published Citation^c # Classes

URI	`http://purl.uniprot.org/core/Published_Citation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Citation^c
Sub-classes	Thesis Citation^c Journal Citation^c Electronic Citation^c Patent Citation^c Submission Citation^c Book Citation^c
In domain of	erratum^op erratum for^op
In range of	erratum^op erratum for^op

RNA^c # Classes

URI	`http://purl.uniprot.org/core/RNA`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Molecule^c
Sub-classes	Viral cRNA^c mRNA^c Other RNA^c Transcribed RNA^c Unassigned RNA^c Genomic RNA^c

RNA Editing^c # Classes

URI	`http://purl.uniprot.org/core/RNA_Editing_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of any type of RNA editing that leads to one or more amino acid changes.
Super-classes	Annotation^c
In domain of	frameshift^dp

Taxon rank^c # Classes

URI	`http://purl.uniprot.org/core/Rank`
Is Defined By	http://purl.uniprot.org/core/
Description	A rank of a taxon.
In range of	rank^op
Members	Subgenus Subcohort Superclass Order Suborder Cohort Species Genus Parvorder Subphylum Isotype Kingdom Superkingdom Paratype Species_Group Subclass Subkingdom Subspecies Forma Varietas Class Superorder Subfamily Infraorder Superphylum Phylum Tribe Infraclass Subtribe Species_Subgroup Family Superfamily

Redox Potential^c # Classes

URI	`http://purl.uniprot.org/core/Redox_Potential_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Reports the value of the standard (midpoint) oxido-reduction potential(s) for electron transport proteins.
Super-classes	Biophysicochemical Property^c

Reference_Proteome^c # Classes

URI	`http://purl.uniprot.org/core/Reference_Proteome`
Is Defined By	http://purl.uniprot.org/core/
Description	Some proteomes have been (manually and algorithmically) selected as reference proteomes.
Super-classes	Proteome^c

Region^c # Classes

URI	`http://purl.uniprot.org/core/Region_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Sequence Annotation^c
Sub-classes	Coiled-Coil^c Domain Extent^c Transmembrane^c Motif^c Compositionally Biased Region^c Calcium Binding^c Repeat^c DNA Binding^c Nucleotide Phosphate Binding^c Zinc Finger^c INTRAMEM^c Topological Domain^c

Repeat^c # Classes

URI	`http://purl.uniprot.org/core/Repeat_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of an internal sequence repetition.
Super-classes	Region^c

Representative_Proteome^c # Classes

URI	`http://purl.uniprot.org/core/Representative_Proteome`
Is Defined By	http://purl.uniprot.org/core/
Description	A proteome that is believed by curators, or selected programmatically to be representative for a number of related Proteomes
Super-classes	Proteome^c

Resource^c # Classes

URI	`http://purl.uniprot.org/core/Resource`
Is Defined By	http://purl.uniprot.org/core/
Description	A life science resource.
Sub-classes	Transcript Resource^c Nucleotide Resource^c Structure Resource^c
In domain of	signature sequence match^op database^op

Reviewed^c # Classes

URI	`http://purl.uniprot.org/core/Reviewed`
Is Defined By	http://purl.uniprot.org/core/
Description	The class of all reviewed records in the database (i.e. records that where looked at by a curator for integration into the database).
Sub-classes	Reviewed protein (records)^c

Reviewed protein (records)^c # Classes

URI	`http://purl.uniprot.org/core/Reviewed_Protein`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Reviewed^c Protein^c
In domain of	nucleotideSequenceMappingIssue^op

Ribosomal Frameshifting^c # Classes

URI	`http://purl.uniprot.org/core/Ribosomal_Frameshifting`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Alternative Products^c

Secondary Structure^c # Classes

URI	`http://purl.uniprot.org/core/Secondary_Structure_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Describes the secondary structure of proteins whose tertiary structure is known experimentally.
Super-classes	Sequence Annotation^c
Sub-classes	Turn^c Helix^c Strand^c

Self protein interaction^c # Classes

URI	`http://purl.uniprot.org/core/Self_Interaction`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of a self protein-protein interaction.
Super-classes	Interaction^c

Sequence^c # Classes

URI	`http://purl.uniprot.org/core/Sequence`
Is Defined By	http://purl.uniprot.org/core/
Description	An amino acid sequence.
Sub-classes	Unknown Sequence^c Known Sequence^c
In domain of	seed for^op sequence for^op MD5 checksum^fp member of^op length^fp predicted mass^fp
In range of	sequence^op potential sequence^op member^op

Sequence Annotation^c # Classes

URI	`http://purl.uniprot.org/core/Sequence_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of a special region or site in a protein sequence.
Super-classes	Annotation^c
Sub-classes	Experimental Information^c Secondary Structure^c Site^c Region^c Modification^c Natural Variation^c Molecule Processing^c

Sequence Caution^c # Classes

URI	`http://purl.uniprot.org/core/Sequence_Caution_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Warning about possible errors related to the protein sequence
Super-classes	Annotation^c
Sub-classes	Erroneous Termination^c Frameshift^c Erroneous Initiation^c Erroneous Translation^c Erroneous Gene Model Prediction^c

Sequence Conflict^c # Classes

URI	`http://purl.uniprot.org/core/Sequence_Conflict_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Different sources report differing sequences.
Super-classes	Experimental Information^c

Unsure Residue^c # Classes

URI	`http://purl.uniprot.org/core/Sequence_Uncertainty_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Used to describe region(s) of a sequence for which the authors are unsure about the sequence assignment.
Super-classes	Experimental Information^c

Signal Peptide^c # Classes

URI	`http://purl.uniprot.org/core/Signal_Peptide_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a signal sequence (prepeptide).
Super-classes	Molecule Processing^c

Similarity^c # Classes

URI	`http://purl.uniprot.org/core/Similarity_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the similarities (sequence or structural) of a protein with other proteins.
Super-classes	Annotation^c

Simple Sequence^c # Classes

URI	`http://purl.uniprot.org/core/Simple_Sequence`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Known Sequence^c
In domain of	precursor^dp fragment^dp
In range of	based on^op

Site^c # Classes

URI	`http://purl.uniprot.org/core/Site_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Any interesting single amino-acid site on the sequence, that is not defined by another feature key. It can also apply to an amino acid bond which is represented by the positions of the two flanking amino acids.
Super-classes	Sequence Annotation^c
Sub-classes	Binding Site^c Metal Ion Binding Site^c Active Site^c

Status^c # Classes

URI	`http://purl.uniprot.org/core/Status`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicator for the reliability of a piece of information.
Members	Experimental By_Similarity Probable Potential

Strain^c # Classes

URI	`http://purl.uniprot.org/core/Strain`
Is Defined By	http://purl.uniprot.org/core/
Description	A strain of a species.
In range of	strain^op

Structure Determination^c # Classes

URI	`http://purl.uniprot.org/core/Structure_Determination_Method`
Is Defined By	http://purl.uniprot.org/core/
Description	An experimental method for determining the 3D structure of a protein.
Super-classes	Method^c
Members	X-Ray_Crystallography Fiber_Diffraction Electron_Microscopy Neutron_Diffraction Infrared_Spectroscopy Prediction NMR_Spectroscopy

Structure Mapping Statement^c # Classes

URI	`http://purl.uniprot.org/core/Structure_Mapping_Statement`
Is Defined By	http://purl.uniprot.org/core/
Description	The relationship between a protein and a 3D structure.
Super-classes	rdf:Statement^c
In domain of	chain^dp

Structure Resource^c # Classes

URI	`http://purl.uniprot.org/core/Structure_Resource`
Is Defined By	http://purl.uniprot.org/core/
Description	A resource that describes the 3D structure of a protein.
Super-classes	Resource^c
In domain of	resolution in Angstrom^fp

Structured_Name^c # Classes

URI	`http://purl.uniprot.org/core/Structured_Name`
Is Defined By	http://purl.uniprot.org/core/
Description	A resource that holds a set of the known names for this protein together.
In domain of	structured name type^dp
In range of	recommended name^op structured name^op submitted name^op alternativeName^op

Subcellular Location^c # Classes

URI	`http://purl.uniprot.org/core/Subcellular_Location`
Is Defined By	http://purl.uniprot.org/core/
Sub-classes	Cellular Component^c Orientation^c Topology^c
In domain of	related location^op part of^op
In range of	related location^op part of^op encoded in^op

Subcellular Location Annotation^c # Classes

URI	`http://purl.uniprot.org/core/Subcellular_Location_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the subcellular location of the mature protein.
Super-classes	Annotation^c
In domain of	located in^op

Submission Citation^c # Classes

URI	`http://purl.uniprot.org/core/Submission_Citation`
Is Defined By	http://purl.uniprot.org/core/
Description	Data that was submitted directly to a database.
Super-classes	Published Citation^c
Restrictions	submitted to^dp exactly 1
In domain of	submitted to^dp

Subunit^c # Classes

URI	`http://purl.uniprot.org/core/Subunit_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the quaternary structure of a protein.
Super-classes	Annotation^c

Taxon^c # Classes

URI	`http://purl.uniprot.org/core/Taxon`
Is Defined By	http://purl.uniprot.org/core/
Description	An element of a taxonomy for classifying life forms.
Restrictions	replaces^op only Taxon^c Mnemonic^dp max 1
Sub-classes	Not obsolete taxon (record)^c Obsolete Taxon^c
In domain of	host^op complete^dp synonym^fp part of lineage^fp other name^dp scientific name^fp rank^op strain^op common name^op
In range of	host^op common taxon^op organism^op

Temperature Dependence^c # Classes

URI	`http://purl.uniprot.org/core/Temperature_Dependence_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicates the optimum temperature for enzyme activity and/or the variation of enzyme activity with temperature variation; the thermostability/thermolability of the enzyme is also mentioned when it is known.
Super-classes	Biophysicochemical Property^c

Thesis Citation^c # Classes

URI	`http://purl.uniprot.org/core/Thesis_Citation`
Is Defined By	http://purl.uniprot.org/core/
Description	A Ph.D. thesis.
Super-classes	Published Citation^c
Restrictions	institution^dp exactly 1
In domain of	institution^dp

Tissue^c # Classes

URI	`http://purl.uniprot.org/core/Tissue`
Is Defined By	http://purl.uniprot.org/core/
Description	A tissue such as lung or heart.
In range of	isolatedFrom^op

Tissue Specificity^c # Classes

URI	`http://purl.uniprot.org/core/Tissue_Specificity_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Description of the tissue specificity of a protein.
Super-classes	Annotation^c

Topological Domain^c # Classes

URI	`http://purl.uniprot.org/core/Topological_Domain_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	A topological domain.
Super-classes	Region^c

Topology^c # Classes

URI	`http://purl.uniprot.org/core/Topology`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Subcellular Location^c
In range of	topology^op

Toxic Dose^c # Classes

URI	`http://purl.uniprot.org/core/Toxic_Dose_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Information on the LD(50). LD stands for "Lethal Dose". LD(50) is the amount of a toxin, given all at once, which causes the death of 50% (one half) of a group of test animals.
Super-classes	Annotation^c

Transcribed RNA^c # Classes

URI	`http://purl.uniprot.org/core/Transcribed_RNA`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	RNA^c

Transcript Resource^c # Classes

URI	`http://purl.uniprot.org/core/Transcript_Resource`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Resource^c
In domain of	translated to^op transcribed from^op

Transit Peptide^c # Classes

URI	`http://purl.uniprot.org/core/Transit_Peptide_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a transit peptide (mitochondrion, chloroplast, thylakoid, cyanelle or microbody).
Super-classes	Molecule Processing^c

Transmembrane^c # Classes

URI	`http://purl.uniprot.org/core/Transmembrane_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a transmembrane region.
Super-classes	Region^c

Transposon^c # Classes

URI	`http://purl.uniprot.org/core/Transposon`
Is Defined By	http://purl.uniprot.org/core/
Description	A transposon

Turn^c # Classes

URI	`http://purl.uniprot.org/core/Turn_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Turns within the experimentally determined protein structure.
Super-classes	Secondary Structure^c

Unassigned DNA^c # Classes

URI	`http://purl.uniprot.org/core/Unassigned_DNA`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	DNA^c

Unassigned RNA^c # Classes

URI	`http://purl.uniprot.org/core/Unassigned_RNA`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	RNA^c

Unknown Sequence^c # Classes

URI	`http://purl.uniprot.org/core/Unknown_Sequence`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Sequence^c

Unpublished Citation^c # Classes

URI	`http://purl.uniprot.org/core/Unpublished_Citation`
Is Defined By	http://purl.uniprot.org/core/
Super-classes	Citation^c
Sub-classes	Observation Citation^c

Viral cRNA^c # Classes

URI	`http://purl.uniprot.org/core/Viral_cRNA`
Is Defined By	http://purl.uniprot.org/core/
Description	Positive cRNA molecule that is made from from a single stranded genomic RNA.
Super-classes	RNA^c

Zinc Finger^c # Classes

URI	`http://purl.uniprot.org/core/Zinc_Finger_Annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Extent of a zinc finger region.
Super-classes	Region^c

Statement^c # Classes

URI	`http://www.w3.org/1999/02/22-rdf-syntax-ns#Statement`
Sub-classes	Structure Mapping Statement^c Nucleotide Mapping Statement^c Domain Assignment Statement^c Citation Statement^c Endpoint Statement^c

Resource^c # Classes

URI	`http://www.w3.org/2000/01/rdf-schema#Resource`
In domain of	redundantTo^op

Class^c # Classes

URI	`http://www.w3.org/2002/07/owl#Class`
Sub-classes	Database (description of)^c Concept^c
Members	Non self interaction ub2676bL1900C17 Glycosylation Site Chain Alternative Splicing Pathway annotation Cofactor Zinc Finger Unassigned RNA ub2676bL2943C16 Observation Citation Modified Sequence Sequence Conflict ub2676bL2081C17 Structure Mapping Statement Propeptide Annotation Peptide Nucleotide Resource Lipid Binding ub2676bL2602C17 Molecule Biophysicochemical Property Disease Annotation Non-consecutive Residues Proteome_Component Subcellular Location ub2676bL2489C17 Caution Subunit Temperature Dependence skos:Concept ub2676bL2590C17 Biotechnology ub2676bL2829C17 rdf:Statement Catalytic Activity Region RNA Structure Resource Splice Variant ub2676bL2855C17 Sequence Annotation ub2676bL2882C17 Topological Domain ub2676bL2028C17 Known Sequence ub2676bL220C21 Repeat Gene Toxic Dose Family Membership Statement ub2676bL2396C17 Taxon rank ub2676bL2808C17 Tissue Domain Modification Orientation Polymorphism Pathway Frameshift Metal Ion Binding Site Representative_Proteome Enzyme Regulation Mass Member Of Redudant Proteome Not Obsolete Erroneous Termination ub2676bL2639C17 Reviewed Genomic DNA ub2676bL1459C25 Activity Regulation Submission Citation ub2676bL1197C25 Crosslink Simple Sequence Erroneous Initiation Plasmid RNA Editing ub2676bL2979C16 Unpublished Citation Journal Citation Obsolete Topology Domain Assignment Statement Pharmaceutical Protein part Status ub2676bL2526C17 rdfs:Resource Attribution Turn Subcellular Location Annotation Concept Nucleotide Phosphate Binding Genomic RNA ub2676bL2918C17 Function ub2676bL1958C17 Not obsolete taxon (record) Interaction Viral cRNA ub2676bL3028C17 Non-terminal Residue Alternative Products Journal Strand Signal Peptide ub2676bL2842C13 Database (description of) Citation ub2676bL248C27 Sequence Caution Resource Natural Variation owl:Thing Mass Measurement Self protein interaction Cellular Component Disease Helix Developmental Stage Site foaf:Image Motif Ribosomal Frameshifting Absorption Endpoint Statement Molecule Processing INTRAMEM Allergen Compositionally Biased Region Modified Residue ub2676bL2772C17 Taxon ub2676bL3006C17 Binding Site Book Citation Alternative Initiation Cluster (UniRef) ub2676bL1791C17 ub2676bL3141C17 PTM Structure Determination Kinetics Active Site Method Patent Citation Structured_Name ub2676bL2839C16 Unsure Residue Disulfide Bond Sequence Erroneous Gene Model Prediction Unassigned DNA Alternative Promoter Usage Published Citation owl:Class Reviewed protein (records) Reference_Proteome Unknown Sequence Coiled-Coil Thesis Citation Obsolete Protein ub2676bL3154C17 Similarity Transit Peptide Enzyme Calcium Binding Protein existence evidence Not obsolete protein (record) ub2676bL3049C17 Tissue Specificity Secondary Structure ub2676bL1813C17 pH Dependence DNA Non standard residue ub2676bL2502C17 External Sequence Mutagenesis Site ub2676bL2817C16 Nucleotide Mapping Statement Electronic Citation Erroneous Translation Disruption Phenotype Redox Potential mRNA DNA Binding Induction Interaction participant Obsolete Taxon Other RNA Initiator Methionine ub2676bL2561C17 Proteome Transcript Resource Protein ub2676bL3078C17 ub2676bL2148C17 ub2676bL2712C17 Domain Extent Transposon Sequence Variant Transmembrane Citation Statement Organelle Experimental Information ub2676bL2341C16 Strain ub2676bL2053C17 Transcribed RNA Other DNA Catalytic Activity Annotation

Thing^c # Classes

URI	`http://www.w3.org/2002/07/owl#Thing`
Sub-classes	Protein part^c Journal^c Protein^c Cluster (UniRef)^c Gene^c Proteome_Component^c
Members	X-Ray_Crystallography Evidence_at_Protein_Level_Existence Evidence_at_Transcript_Level_Existence LSIMS Experimental Hydrogenosome MALDI Predicted_Existence Subclass Fiber_Diffraction Plastid Apicoplast By_Similarity Subkingdom Mitochondrion Non-photosynthetic_plastid Suborder API Genus Organellar_chromatophore Chloroplast Parvorder Subspecies Forma Kingdom Class Paratype Electron_Microscopy Neutron_Diffraction Species_Group Subfamily Infrared_Spectroscopy Infraorder Superphylum Probable Phylum Potential SELDI Varietas Species_Subgroup Superfamily Superorder FAB Subgenus Prediction Subcohort ESI NMR_Spectroscopy Uncertain_Existence Nucleomorph Superclass Inferred_from_Homology_Existence Cyanelle Order Cohort Species Tribe Infraclass Subphylum Subtribe PD Isotype Family Superkingdom

Concept^c # Classes

URI	`http://www.w3.org/2004/02/skos/core#Concept`
Sub-classes	Gene^c

Image^c # Classes

URI	`http://xmlns.com/foaf/0.1/Image`
In domain of	width^fp height^fp

Object Properties ↑

location
reference
catalytic activity
alternativeName
annotation
attribution
based on
catalytic activity
catalyzed physiological reaction
catalyzed reaction
category
cellular component
chainSequenceMapping
citation
classified with
cofactor
common name
common taxon
proteome component
conflicting sequence
context
database
disease
domain
encoded by
encoded in
enzyme
enzyme class
erratum
erratum for
existence
host
interaction
isolatedFrom
located in
located on
locus name
mapped annotation
mapped citation
member
member of
method
modification
nucleotideSequenceMappingIssue
organism
orientation
panproteome
part
part of
participant
potential sequence
published in
rank
recommended name
redundantTo
related location
replaced by
replaces
representative for
seed for
sequence
sequence discrepancy
sequence for
signature sequence match
some members classified with
source
status
strain
structured name
submitted name
topology
transcribed from
translated from
translated to
withdrawnFromINSDC
label
prefLabel

location^op # OPs

URI	`http://biohackathon.org/resource/faldo#location`

reference^op # OPs

URI	`http://biohackathon.org/resource/faldo#reference`

catalytic activity^op # OPs

URI	`http://purl.uniprot.org/core/activity`
Is Defined By	http://purl.uniprot.org/core/
Description	The catalytic activity of an enzyme.
Domain(s)	Enzyme^c
Range(s)	Catalytic_Activity^c

alternativeName^op # OPs

URI	`http://purl.uniprot.org/core/alternativeName`
Is Defined By	http://purl.uniprot.org/core/
Description	A synonym of the recommended name.
Super-properties	structured name^op
Domain(s)	(Protein part^c or Protein^c)
Range(s)	Structured_Name^c

annotation^op # OPs

URI	`http://purl.uniprot.org/core/annotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Attaches an annotation to a resource.
Domain(s)	Protein^c
Range(s)	Annotation^c

attribution^op # OPs

URI	`http://purl.uniprot.org/core/attribution`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	(Protein^c or rdf:Statement^c)
Range(s)	Attribution^c

based on^op # OPs

URI	`http://purl.uniprot.org/core/basedOn`
Is Defined By	http://purl.uniprot.org/core/
Description	The sequence on which the description of a modified sequence is based.
Domain(s)	Modified Sequence^c
Range(s)	Simple_Sequence^c

catalytic activity^op # OPs

URI	`http://purl.uniprot.org/core/catalyticActivity`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Catalytic Activity Annotation^c
Range(s)	Catalytic_Activity^c

catalyzed physiological reaction^op # OPs

URI	`http://purl.uniprot.org/core/catalyzedPhysiologicalReaction`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Catalytic Activity Annotation^c

catalyzed reaction^op # OPs

URI	`http://purl.uniprot.org/core/catalyzedReaction`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Catalytic Activity^c

category^op # OPs

URI	`http://purl.uniprot.org/core/category`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Database (description of)^c

cellular component^op # OPs

URI	`http://purl.uniprot.org/core/cellularComponent`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	(ub2676bL1902C29^c and ub2676bL1908C13^c and ub2676bL1914C13^c)
Range(s)	Cellular_Component^c

chainSequenceMapping^op # OPs

URI	`http://purl.uniprot.org/core/chainSequenceMapping`
Is Defined By	http://purl.uniprot.org/core/
Description	A mapping between a Sequence/Entry and aminoacids described in a PDB record.
Domain(s)	Protein^c

citation^op # OPs

URI	`http://purl.uniprot.org/core/citation`
Is Defined By	http://purl.uniprot.org/core/
Description	A publication from which data was extracted, or which contains additional information.
Domain(s)	(Cellular Component^c or Database (description of)^c or External Sequence^c or Nucleotide Resource^c or Orientation^c or Protein^c or Topology^c)
Range(s)	Citation^c

classified with^op # OPs

URI	`http://purl.uniprot.org/core/classifiedWith`
Is Defined By	http://purl.uniprot.org/core/
Description	A concept that classifies this resource.
Domain(s)	Protein^c
Range(s)	Concept^c

cofactor^op # OPs

URI	`http://purl.uniprot.org/core/cofactor`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Cofactor^c

common name^op # OPs

URI	`http://purl.uniprot.org/core/commonName`
Is Defined By	http://purl.uniprot.org/core/
Super-properties	name^dp
Domain(s)	Taxon^c

common taxon^op # OPs

URI	`http://purl.uniprot.org/core/commonTaxon`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Cluster (UniRef)^c
Range(s)	Taxon^c

proteome component^op # OPs

URI	`http://purl.uniprot.org/core/component`
Is Defined By	http://purl.uniprot.org/core/
Description	A component of a protein.
Super-properties	part^op
Domain(s)	Protein^c
Range(s)	Part^c

conflicting sequence^op # OPs

URI	`http://purl.uniprot.org/core/conflictingSequence`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	(Protein^c or Sequence Caution^c or Sequence Conflict^c)
Range(s)	External_Sequence^c

context^op # OPs

URI	`http://purl.uniprot.org/core/context`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Citation Statement^c

database^op # OPs

URI	`http://purl.uniprot.org/core/database`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Resource^c
Range(s)	Database^c

disease^op # OPs

URI	`http://purl.uniprot.org/core/disease`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Disease Annotation^c
Range(s)	Disease^c

domain^op # OPs

URI	`http://purl.uniprot.org/core/domain`
Is Defined By	http://purl.uniprot.org/core/
Description	A domain of a protein.
Super-properties	part^op
Domain(s)	Protein^c
Range(s)	Part^c

encoded by^op # OPs

URI	`http://purl.uniprot.org/core/encodedBy`
Is Defined By	http://purl.uniprot.org/core/
Description	The gene by which a protein is encoded.
Domain(s)	Protein^c
Range(s)	Gene^c

encoded in^op # OPs

URI	`http://purl.uniprot.org/core/encodedIn`
Is Defined By	http://purl.uniprot.org/core/
Description	The subcellular location where a protein is encoded.
Domain(s)	Protein^c
Range(s)	Subcellular_Location^c

enzyme^op # OPs

URI	`http://purl.uniprot.org/core/enzyme`
Is Defined By	http://purl.uniprot.org/core/
Description	The catalytic activity associated with a protein. or part of a protein.
Domain(s)	(Protein part^c or Protein^c)
Range(s)	Enzyme^c

enzyme class^op # OPs

URI	`http://purl.uniprot.org/core/enzymeClass`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Catalytic Activity^c
Range(s)	Enzyme^c

erratum^op # OPs

URI	`http://purl.uniprot.org/core/erratum`
Is Defined By	http://purl.uniprot.org/core/
Description	An erratum for a publication.
Inverse properties	erratum for^op
Domain(s)	Published Citation^c
Range(s)	Published_Citation^c

erratum for^op # OPs

URI	`http://purl.uniprot.org/core/erratumFor`
Is Defined By	http://purl.uniprot.org/core/
Description	The publication which an erratum refers to.
Domain(s)	Published Citation^c
Range(s)	Published_Citation^c

existence^op # OPs

URI	`http://purl.uniprot.org/core/existence`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Protein^c

host^op # OPs

URI	`http://purl.uniprot.org/core/host`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Taxon^c
Range(s)	Taxon^c

interaction^op # OPs

URI	`http://purl.uniprot.org/core/interaction`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Protein^c
Range(s)	Interaction^c

isolatedFrom^op # OPs

URI	`http://purl.uniprot.org/core/isolatedFrom`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Protein^c
Range(s)	Tissue^c

located in^op # OPs

URI	`http://purl.uniprot.org/core/locatedIn`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Subcellular Location Annotation^c
Range(s)	ub2676bL2343C29 ub2676bL2349C13 ub2676bL2355C13

located on^op # OPs

URI	`http://purl.uniprot.org/core/locatedOn`
Is Defined By	http://purl.uniprot.org/core/
Description	The molecule a this resource is located on.
Domain(s)	Nucleotide Resource^c
Range(s)	Molecule^c

locus name^op # OPs

URI	`http://purl.uniprot.org/core/locusName`
Is Defined By	http://purl.uniprot.org/core/
Super-properties	name^dp
Domain(s)	Gene^c

mapped annotation^op # OPs

URI	`http://purl.uniprot.org/core/mappedAnnotation`
Is Defined By	http://purl.uniprot.org/core/
Description	Maps annotation to a resource. Used to link annotations/comments from external non UniProt sources via Citations to UniProt resources.
Domain(s)	(Citation Statement^c or Protein^c)
Range(s)	Annotation^c

mapped citation^op # OPs

URI	`http://purl.uniprot.org/core/mappedCitation`
Is Defined By	http://purl.uniprot.org/core/
Description	A publication from which data was by a extracted by a mapping from non UniProt origin, or which contains additional information.
Domain(s)	Protein^c
Range(s)	Citation^c

member^op # OPs

URI	`http://purl.uniprot.org/core/member`
Is Defined By	http://purl.uniprot.org/core/
Description	One of several similar resources.
Inverse properties	member of^op
Domain(s)	Cluster (UniRef)^c
Range(s)	Sequence^c

member of^op # OPs

URI	`http://purl.uniprot.org/core/memberOf`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Sequence^c
Range(s)	Cluster^c

method^op # OPs

URI	`http://purl.uniprot.org/core/method`
Is Defined By	http://purl.uniprot.org/core/
Description	The experimental method that was used.
Domain(s)	(Mass^c or Structure Resource^c)
Range(s)	Method^c

modification^op # OPs

URI	`http://purl.uniprot.org/core/modification`
Is Defined By	http://purl.uniprot.org/core/
Description	A modification of a sequence.
Domain(s)	Modified Sequence^c
Range(s)	Alternative_Sequence_Annotation^c

nucleotideSequenceMappingIssue^op # OPs

URI	`http://purl.uniprot.org/core/nucleotideSequenceMappingIssue`
Is Defined By	http://purl.uniprot.org/core/
Description	When a CDS differs substantially from a reviewed UniProtKB/Swiss-Prot sequence, the UniProt curators indicate the nature of the difference in the corresponding cross-reference.
Domain(s)	Reviewed protein (records)^c
Range(s)	Nucleotide_Resource^c

organism^op # OPs

URI	`http://purl.uniprot.org/core/organism`
Is Defined By	http://purl.uniprot.org/core/
Description	The organism in which a protein occurs.
Domain(s)	(Protein^c or Sequence^c)
Range(s)	Taxon^c

orientation^op # OPs

URI	`http://purl.uniprot.org/core/orientation`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	(ub2676bL2604C29^c and ub2676bL2610C13^c and ub2676bL2616C13^c)
Range(s)	Orientation^c

panproteome^op # OPs

URI	`http://purl.uniprot.org/core/panproteome`
Is Defined By	http://purl.uniprot.org/core/
Description	The current pan proteome sequences are derived from the reference proteome clusters (75% proteome similarity for Fungus and 55% proteome similarity for Archaea and Bacteria). A reference proteome cluster is also known as a representative proteome group (RPG) (Chen et al., 2011). A RPG contains similar proteomes calculated based on their co-membership in UniRef50 clusters. For each non-singleton reference proteome cluster, a pan proteome is a set of sequences consisting of all the sequences in the reference proteome, plus the addition of unique protein sequences that are found in other species or strains of the cluster but not in the reference proteome. These additional sequences are identified using UniRef50 membership.
Domain(s)	Proteome^c
Range(s)	Proteome^c

part^op # OPs

URI	`http://purl.uniprot.org/core/part`
Is Defined By	http://purl.uniprot.org/core/
Range(s)	Part^c

part of^op # OPs

URI	`http://purl.uniprot.org/core/partOf`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Subcellular Location^c
Range(s)	Subcellular_Location^c

participant^op # OPs

URI	`http://purl.uniprot.org/core/participant`
Is Defined By	http://purl.uniprot.org/core/
Description	A protein that participates in a protein-protein interaction.
Domain(s)	Interaction^c
Range(s)	Participant^c

potential sequence^op # OPs

URI	`http://purl.uniprot.org/core/potentialSequence`
Is Defined By	http://purl.uniprot.org/core/
Description	This is a predicate added by an automated procedure to link entries/proteins that might be isoforms of each other.
Domain(s)	Protein^c
Range(s)	Sequence^c

published in^op # OPs

URI	`http://purl.uniprot.org/core/publishedIn`
Is Defined By	http://purl.uniprot.org/core/
Description	Reserved predicate to link a citation to the Journal that it appeared in.
Domain(s)	Citation^c
Range(s)	Journal^c

rank^op # OPs

URI	`http://purl.uniprot.org/core/rank`
Is Defined By	http://purl.uniprot.org/core/
Description	The rank of a taxon.
Domain(s)	Taxon^c
Range(s)	Rank^c

recommended name^op # OPs

URI	`http://purl.uniprot.org/core/recommendedName`
Is Defined By	http://purl.uniprot.org/core/
Description	The name recommended by the UniProt consortium.
Super-properties	structured name^op
Domain(s)	(Protein part^c or Protein^c)
Range(s)	Structured_Name^c

redundantTo^op # OPs

URI	`http://purl.uniprot.org/core/redundantTo`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicates which proteome this proteome is redundant to.
Domain(s)	rdfs:Resource^c
Range(s)	Proteome^c

related location^op # OPs

URI	`http://purl.uniprot.org/core/relatedLocation`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Subcellular Location^c
Range(s)	Subcellular_Location^c

replaced by^op # OPs

URI	`http://purl.uniprot.org/core/replacedBy`
Is Defined By	http://purl.uniprot.org/core/
Description	A resource that replaces this resource.
Inverse properties	replaces^op
Domain(s)	(Enzyme^c or Protein^c or Taxon^c)
Range(s)	http://purl.uniprot.org/core/Enzyme http://purl.uniprot.org/core/Protein http://purl.uniprot.org/core/Taxon

replaces^op # OPs

URI	`http://purl.uniprot.org/core/replaces`
Is Defined By	http://purl.uniprot.org/core/
Description	A resource that is replaced by this resource.
Domain(s)	(Enzyme^c or Protein^c or Taxon^c or Proteome^c)
Range(s)	http://purl.uniprot.org/core/Obsolete ub2676bL2842C13

representative for^op # OPs

URI	`http://purl.uniprot.org/core/representativeFor`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	(Protein^c or Sequence^c)
Range(s)	Cluster^c

seed for^op # OPs

URI	`http://purl.uniprot.org/core/seedFor`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Sequence^c
Range(s)	Cluster^c

sequence^op # OPs

URI	`http://purl.uniprot.org/core/sequence`
Is Defined By	http://purl.uniprot.org/core/
Description	An amino acid sequence.
Inverse properties	sequence for^op
Domain(s)	(Annotation^c or Protein^c or Resource^c)
Range(s)	Sequence^c

sequence discrepancy^op # OPs

URI	`http://purl.uniprot.org/core/sequenceDiscrepancy`
Is Defined By	http://purl.uniprot.org/core/
Description	Used when a CoDing Sequences (CDS) from the INSDC differs substantially from a reviewed UniProtKB/Swiss-Prot sequence, the UniProt curators indicate the nature of the difference as a rdfs:comment linked via this predicate.
Domain(s)	Nucleotide Resource^c

sequence for^op # OPs

URI	`http://purl.uniprot.org/core/sequenceFor`
Is Defined By	http://purl.uniprot.org/core/
Description	A resource that describes this sequence.
Domain(s)	Sequence^c
Range(s)	http://purl.uniprot.org/core/Annotation http://purl.uniprot.org/core/Protein http://purl.uniprot.org/core/Resource

signature sequence match^op # OPs

URI	`http://purl.uniprot.org/core/signatureSequenceMatch`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicates that the signature described by the subject resource matches mathematically and that that match is described by the object of a triple using this property as predicate.
Domain(s)	Resource^c

some members classified with^op # OPs

URI	`http://purl.uniprot.org/core/someMembersClassifiedWith`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicates which GO terms are somewhat consistently used to annotate UniProtKB members of this cluster.
Domain(s)	Cluster (UniRef)^c
Range(s)	http://purl.obolibrary.org/obo/GO_0003674 http://purl.obolibrary.org/obo/GO_0005575 http://purl.obolibrary.org/obo/GO_0008150

source^op # OPs

URI	`http://purl.uniprot.org/core/source`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Attribution^c

status^op # OPs

URI	`http://purl.uniprot.org/core/status`

strain^op # OPs

URI	`http://purl.uniprot.org/core/strain`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Taxon^c
Range(s)	Strain^c

structured name^op # OPs

URI	`http://purl.uniprot.org/core/structuredName`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	(Protein part^c or Protein^c)
Range(s)	Structured_Name^c

submitted name^op # OPs

URI	`http://purl.uniprot.org/core/submittedName`
Is Defined By	http://purl.uniprot.org/core/
Description	A name provided by the submitter of the underlying nucleotide sequence.
Super-properties	structured name^op
Domain(s)	(Protein part^c or Protein^c)
Range(s)	Structured_Name^c

topology^op # OPs

URI	`http://purl.uniprot.org/core/topology`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	(ub2676bL3080C29^c and ub2676bL3086C13^c and ub2676bL3092C13^c)
Range(s)	Topology^c

transcribed from^op # OPs

URI	`http://purl.uniprot.org/core/transcribedFrom`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Transcript Resource^c

translated from^op # OPs

URI	`http://purl.uniprot.org/core/translatedFrom`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	External Sequence^c
Range(s)	Nucleotide_Resource^c

translated to^op # OPs

URI	`http://purl.uniprot.org/core/translatedTo`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Transcript Resource^c

withdrawnFromINSDC^op # OPs

URI	`http://purl.uniprot.org/core/withdrawnFromINSDC`
Is Defined By	http://purl.uniprot.org/core/

label^op # OPs

URI	`http://www.w3.org/2000/01/rdf-schema#label`

prefLabel^op # OPs

URI	`http://www.w3.org/2004/02/skos/core#prefLabel`

abstract^fp # FPs

URI	`http://purl.uniprot.org/core/abstract`
Is Defined By	http://purl.uniprot.org/core/
Description	True if the class does not have any direct instances.
Domain(s)	Database (description of)^c
Range(s)	xsd:boolean^c

Datatype Properties ↑

alias
allergen name
atypical
author
authorsIncomplete
base
begin
biotechName
CD molecule antigen name
chain
checksum
cofactorLabel
complete
crc64Checksum
curated
domains
EC as a name
editor
end
proteome exclusion reason
fragment
frameshift
fullName
fused
group
hits
institution
international non proprietary name
limit
link is explicit
locator
measured activity
measured affinity
Mnemonic
name
old mnemonic
ORF name
other name
partial
position
precursor
publisher
range
reference proteome
representative proteome
scope
shortCoden
short name
structured name type
submitted to
substitution
URI template
URL template

alias^dp # DPs

URI	`http://purl.uniprot.org/core/alias`
Is Defined By	http://purl.uniprot.org/core/
Description	An alternative name used in the flat text format.
Range(s)	xsd:string^c

allergen name^dp # DPs

URI	`http://purl.uniprot.org/core/allergenName`
Is Defined By	http://purl.uniprot.org/core/
Description	See http://www.expasy.org/cgi-bin/lists?allergen.txt
Super-properties	structured name type^dp

atypical^dp # DPs

URI	`http://purl.uniprot.org/core/atypical`
Is Defined By	http://purl.uniprot.org/core/

author^dp # DPs

URI	`http://purl.uniprot.org/core/author`
Is Defined By	http://purl.uniprot.org/core/
Description	The author of a publication.
Domain(s)	Citation^c
Range(s)	xsd:string^c

authorsIncomplete^dp # DPs

URI	`http://purl.uniprot.org/core/authorsIncomplete`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Citation^c
Range(s)	xsd:boolean^c

base^dp # DPs

URI	`http://purl.uniprot.org/core/base`

begin^dp # DPs

URI	`http://purl.uniprot.org/core/begin`

biotechName^dp # DPs

URI	`http://purl.uniprot.org/core/biotechName`
Is Defined By	http://purl.uniprot.org/core/
Description	A name used in a biotechnological context.
Super-properties	structured name type^dp

CD molecule antigen name^dp # DPs

URI	`http://purl.uniprot.org/core/cdAntigenName`
Is Defined By	http://purl.uniprot.org/core/
Description	A name from the Human Cell Differentiation Molecules (HCDM) nomenclature.
Super-properties	structured name type^dp

chain^dp # DPs

URI	`http://purl.uniprot.org/core/chain`
Is Defined By	http://purl.uniprot.org/core/
Description	Maps a series of symbols representing chains of a protein to a range of amino acids.
Domain(s)	Structure Mapping Statement^c
Range(s)	xsd:string^c

checksum^dp # DPs

URI	`http://purl.uniprot.org/core/checksum`
Is Defined By	http://purl.uniprot.org/core/
Description	An caclulated value that is used to detect if there are errors in the sequence as shown due to among others IO errors. Both the crc64 and md5sum have collisions in UniProt data and cannot be used as unique keys.

cofactorLabel^dp # DPs

URI	`http://purl.uniprot.org/core/cofactorLabel`
Is Defined By	http://purl.uniprot.org/core/
Description	A cofactor required for a catalytic activity.
Domain(s)	Enzyme^c
Range(s)	xsd:string^c

complete^dp # DPs

URI	`http://purl.uniprot.org/core/complete`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Taxon^c
Range(s)	xsd:boolean^c

crc64Checksum^dp # DPs

URI	`http://purl.uniprot.org/core/crc64Checksum`
Is Defined By	http://purl.uniprot.org/core/

curated^dp # DPs

URI	`http://purl.uniprot.org/core/curated`
Is Defined By	http://purl.uniprot.org/core/
Description	If true the described database has some level of curation.
Domain(s)	Database (description of)^c
Range(s)	xsd:boolean^c

domains^dp # DPs

URI	`http://purl.uniprot.org/core/domains`

EC as a name^dp # DPs

URI	`http://purl.uniprot.org/core/ecName`
Is Defined By	http://purl.uniprot.org/core/
Description	The ecName is the enzyme classification associated with a structured name of the protein. Proteins are often named after their enzymatic activity but can have more than one activity leading to multiple names.
Super-properties	structured name type^dp

editor^dp # DPs

URI	`http://purl.uniprot.org/core/editor`
Is Defined By	http://purl.uniprot.org/core/
Description	The editor of a publication.
Domain(s)	Book Citation^c
Range(s)	xsd:string^c

end^dp # DPs

URI	`http://purl.uniprot.org/core/end`

proteome exclusion reason^dp # DPs

URI	`http://purl.uniprot.org/core/exclusionReason`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicates why the proteins of an Proteome where excluded from UniProtKB.
Domain(s)	Proteome^c
Range(s)	xsd:string^c

fragment^dp # DPs

URI	`http://purl.uniprot.org/core/fragment`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicates if a sequence is complete or consists of one or more fragments.
Domain(s)	Simple Sequence^c

frameshift^dp # DPs

URI	`http://purl.uniprot.org/core/frameshift`
Is Defined By	http://purl.uniprot.org/core/
Description	True if a sequence modification causes a frameshift.
Domain(s)	RNA Editing^c
Range(s)	xsd:boolean^c

fullName^dp # DPs

URI	`http://purl.uniprot.org/core/fullName`
Is Defined By	http://purl.uniprot.org/core/
Description	The full name.
Super-properties	structured name type^dp

fused^dp # DPs

URI	`http://purl.uniprot.org/core/fused`

group^dp # DPs

URI	`http://purl.uniprot.org/core/group`
Is Defined By	http://purl.uniprot.org/core/
Description	The group or consortium that authored a publication.
Super-properties	author^dp
Domain(s)	Citation^c
Range(s)	xsd:string^c

hits^dp # DPs

URI	`http://purl.uniprot.org/core/hits`

institution^dp # DPs

URI	`http://purl.uniprot.org/core/institution`
Is Defined By	http://purl.uniprot.org/core/
Description	The institution at which a thesis was written.
Domain(s)	Thesis Citation^c
Range(s)	xsd:string^c

international non proprietary name^dp # DPs

URI	`http://purl.uniprot.org/core/internationalNonproprietaryName`
Is Defined By	http://purl.uniprot.org/core/
Description	The international nonproprietary name: A generic name for a pharmaceutical substance or active pharmaceutical ingredient that is globally recognized and is a public property.
Super-properties	structured name type^dp

limit^dp # DPs

URI	`http://purl.uniprot.org/core/limit`

link is explicit^dp # DPs

URI	`http://purl.uniprot.org/core/linkIsExplicit`
Is Defined By	http://purl.uniprot.org/core/
Description	True if the Database is linked by an explicit action to UniProt, false if it is done using a simple hardcoded rule.
Domain(s)	Database (description of)^c
Range(s)	xsd:boolean^c

locator^dp # DPs

URI	`http://purl.uniprot.org/core/locator`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Citation^c
Range(s)	xsd:string^c

measured activity^dp # DPs

URI	`http://purl.uniprot.org/core/measuredActivity`
Is Defined By	http://purl.uniprot.org/core/
Description	The maximum velocity, Vmax.
Domain(s)	Kinetics^c
Range(s)	xsd:string^c

measured affinity^dp # DPs

URI	`http://purl.uniprot.org/core/measuredAffinity`
Is Defined By	http://purl.uniprot.org/core/
Description	The Michaelis-Menten constant, Km.
Domain(s)	Kinetics^c
Range(s)	xsd:string^c

Mnemonic^dp # DPs

URI	`http://purl.uniprot.org/core/mnemonic`
Is Defined By	http://purl.uniprot.org/core/
Description	A easy to remember identifier for a UniProtKB entry, but it is not a stable identifier and should not be used by programs to identify entries.
Super-properties	name^dp
Domain(s)	(Cluster (UniRef)^c or Protein^c or Sequence^c)
Range(s)	xsd:string^c

name^dp # DPs

URI	`http://purl.uniprot.org/core/name`
Is Defined By	http://purl.uniprot.org/core/
Range(s)	xsd:string^c

old mnemonic^dp # DPs

URI	`http://purl.uniprot.org/core/oldMnemonic`
Is Defined By	http://purl.uniprot.org/core/
Description	A mnemonic that is no longer in use for this entry.
Super-properties	name^dp
Domain(s)	Protein^c
Range(s)	xsd:string^c

ORF name^dp # DPs

URI	`http://purl.uniprot.org/core/orfName`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Gene^c
Range(s)	xsd:string^c

other name^dp # DPs

URI	`http://purl.uniprot.org/core/otherName`
Is Defined By	http://purl.uniprot.org/core/
Super-properties	name^dp
Domain(s)	Taxon^c
Range(s)	xsd:string^c

partial^dp # DPs

URI	`http://purl.uniprot.org/core/partial`

position^dp # DPs

URI	`http://purl.uniprot.org/core/position`

precursor^dp # DPs

URI	`http://purl.uniprot.org/core/precursor`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Simple Sequence^c
Range(s)	xsd:boolean^c

publisher^dp # DPs

URI	`http://purl.uniprot.org/core/publisher`
Is Defined By	http://purl.uniprot.org/core/
Description	The publisher of a book.
Domain(s)	Book Citation^c
Range(s)	xsd:string^c

range^dp # DPs

URI	`http://purl.uniprot.org/core/range`

reference proteome^dp # DPs

URI	`http://purl.uniprot.org/core/referenceProteome`
Is Defined By	http://purl.uniprot.org/core/

representative proteome^dp # DPs

URI	`http://purl.uniprot.org/core/representativeProteome`
Is Defined By	http://purl.uniprot.org/core/

scope^dp # DPs

URI	`http://purl.uniprot.org/core/scope`
Is Defined By	http://purl.uniprot.org/core/
Description	The extent of the work carried out by the authors of a publication.
Domain(s)	Citation Statement^c
Range(s)	xsd:string^c

shortCoden^dp # DPs

URI	`http://purl.uniprot.org/core/shortCoden`
Is Defined By	http://purl.uniprot.org/core/
Description	Used to link a Journal to its shortCoden
Domain(s)	Journal^c
Range(s)	xsd:string^c

short name^dp # DPs

URI	`http://purl.uniprot.org/core/shortName`
Is Defined By	http://purl.uniprot.org/core/
Description	An abbreviation of the full name or an acronym.
Super-properties	structured name type^dp

structured name type^dp # DPs

URI	`http://purl.uniprot.org/core/structuredNameType`
Is Defined By	http://purl.uniprot.org/core/
Description	All names of the protein, from commonly used to obsolete, to used in the literature..
Domain(s)	Structured_Name^c
Range(s)	xsd:string^c

submitted to^dp # DPs

URI	`http://purl.uniprot.org/core/submittedTo`
Is Defined By	http://purl.uniprot.org/core/
Description	The database a resource was submitted to.
Domain(s)	Submission Citation^c

substitution^dp # DPs

URI	`http://purl.uniprot.org/core/substitution`
Is Defined By	http://purl.uniprot.org/core/
Description	A replacement sequence.
Domain(s)	(Mutagenesis Site^c or Sequence Variant^c or Sequence Conflict^c)
Range(s)	xsd:string^c

URI template^dp # DPs

URI	`http://purl.uniprot.org/core/uriTemplate`
Is Defined By	http://purl.uniprot.org/core/
Description	An string template that can be used to figure out from the database id what uri desribes it.
Domain(s)	Database (description of)^c
Range(s)	xsd:string^c

URL template^dp # DPs

URI	`http://purl.uniprot.org/core/urlTemplate`
Is Defined By	http://purl.uniprot.org/core/
Description	An string template that can be used to figure out from the database id what html page talks about it.
Domain(s)	Database (description of)^c
Range(s)	xsd:string^c

Named Individuals ↑

Apicoplast
Atmospheric Pressure Ionization
By Similarity
Chloroplast
Cohort
Cyanelle
Electron Microscopy
Electrospray Ionization
Evidence at protein level
Evidence at transcript level
Fast Atom Bombardment
Fiber Diffraction
Hydrogenosome
Indicates that there is some experimental evidence that the given annotation could apply.
Inferred from homology
Infrared Spectroscopy
Liquid Secondary Ionization
Matrix-Assisted Laser Desorption
Mitochondrion
NMR Spectroscopy
Neutron Diffraction
Non-photosyntethic plastid
Nuleomorph
Organellar chromatophore
Plasma Desorption
Plastid
Potential
Predicted
Prediction
Probable
Subcohort
Surface Enhanced Laser Desorption Ionization
Taxonomic rank Species
Taxonomic rank Species Group
Taxonomic rank Species Subgroup
Taxonomic rank Subclass
Taxonomic rank Subfamily
Taxonomic rank Subgenus
Taxonomic rank Subkingdom
Taxonomic rank Suborder
Taxonomic rank Subphylum
Taxonomic rank Subspecies
Taxonomic rank Subtribe
Taxonomic rank Superclass
Taxonomic rank Superfamily
Taxonomic rank Superkingdom
Taxonomic rank Superorder
Taxonomic rank Superphylum
Taxonomic rank Tribe
Taxonomic rank Varietas
Taxonomy rank Class
Taxonomy rank Family
Taxonomy rank Forma
Taxonomy rank Genus
Taxonomy rank Infraclass
Taxonomy rank Infraorder
Taxonomy rank Isotype
Taxonomy rank Kingdom
Taxonomy rank Order
Taxonomy rank Paratype
Taxonomy rank Parvorder
Taxonomy rank Phylum
Uncertain
X-Ray Crystallography

Atmospheric Pressure Ionizationⁿⁱ

Class(es)

Mass_Measurement_Method
owl:Thing

URI	`http://purl.uniprot.org/core/API`
Is Defined By	http://purl.uniprot.org/core/
Description	Mass measurement using Atmospheric Pressure Ionization

Apicoplastⁿⁱ

Class(es)

owl:Thing
Organelle

URI	`http://purl.uniprot.org/core/Apicoplast`
Is Defined By	http://purl.uniprot.org/core/

By Similarityⁿⁱ

Class(es)

Status
owl:Thing

URI	`http://purl.uniprot.org/core/By_Similarity`
Is Defined By	http://purl.uniprot.org/core/

Chloroplastⁿⁱ

Class(es)

owl:Thing
Organelle

URI	`http://purl.uniprot.org/core/Chloroplast`
Is Defined By	http://purl.uniprot.org/core/

Taxonomy rank Classⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Class`
Is Defined By	http://purl.uniprot.org/core/

Cohortⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Cohort`
Is Defined By	http://purl.uniprot.org/core/
Description	Taxonomy rank cohort

Cyanelleⁿⁱ

Class(es)

owl:Thing
Organelle

URI	`http://purl.uniprot.org/core/Cyanelle`
Is Defined By	http://purl.uniprot.org/core/

Electrospray Ionizationⁿⁱ

Class(es)

Mass_Measurement_Method
owl:Thing

URI	`http://purl.uniprot.org/core/ESI`
Is Defined By	http://purl.uniprot.org/core/
See Also	dbpedia:Electrospray_ionization

Electron Microscopyⁿⁱ

Class(es)

Structure_Determination_Method
owl:Thing

URI	`http://purl.uniprot.org/core/Electron_Microscopy`
Is Defined By	http://purl.uniprot.org/core/
Description	The electron microscope is a microscope that can magnify very small details with high resolving power due to the use of electrons rather than light to scatter off material, magnifying at levels up to 500,000 times.
See Also	dbpedia:Electron_microscopy

Evidence at protein levelⁿⁱ

Class(es)

Protein_Existence
owl:Thing

URI	`http://purl.uniprot.org/core/Evidence_at_Protein_Level_Existence`
Is Defined By	http://purl.uniprot.org/core/

Evidence at transcript levelⁿⁱ

Class(es)

Protein_Existence
owl:Thing

URI	`http://purl.uniprot.org/core/Evidence_at_Transcript_Level_Existence`
Is Defined By	http://purl.uniprot.org/core/
Description	Indicates that the existence of a protein has not been strictly proven but that expression data (such as existence of cDNA(s), RT-PCR or Northern blots) indicate the existence of a transcript.

Indicates that there is some experimental evidence that the given annotation could apply.ⁿⁱ

Class(es)

Status
owl:Thing

URI	`http://purl.uniprot.org/core/Experimental`
Is Defined By	http://purl.uniprot.org/core/

Fast Atom Bombardmentⁿⁱ

Class(es)

Mass_Measurement_Method
owl:Thing

URI	`http://purl.uniprot.org/core/FAB`
Is Defined By	http://purl.uniprot.org/core/

Taxonomy rank Familyⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Family`
Is Defined By	http://purl.uniprot.org/core/

Fiber Diffractionⁿⁱ

Class(es)

Structure_Determination_Method
owl:Thing

URI	`http://purl.uniprot.org/core/Fiber_Diffraction`
Is Defined By	http://purl.uniprot.org/core/

Taxonomy rank Formaⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Forma`
Is Defined By	http://purl.uniprot.org/core/

Taxonomy rank Genusⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Genus`
Is Defined By	http://purl.uniprot.org/core/

Hydrogenosomeⁿⁱ

Class(es)

owl:Thing
Organelle

URI	`http://purl.uniprot.org/core/Hydrogenosome`
Is Defined By	http://purl.uniprot.org/core/

Inferred from homologyⁿⁱ

Class(es)

Protein_Existence
owl:Thing

URI	`http://purl.uniprot.org/core/Inferred_from_Homology_Existence`
Is Defined By	http://purl.uniprot.org/core/

Taxonomy rank Infraclassⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Infraclass`
Is Defined By	http://purl.uniprot.org/core/

Taxonomy rank Infraorderⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Infraorder`
Is Defined By	http://purl.uniprot.org/core/

Infrared Spectroscopyⁿⁱ

Class(es)

Structure_Determination_Method
owl:Thing

URI	`http://purl.uniprot.org/core/Infrared_Spectroscopy`
Is Defined By	http://purl.uniprot.org/core/
Description	A type of spectroscopy that uses the Infrared portion of the electromagnetic spectrum.
See Also	dbpedia:Infrared_spectroscopy

Taxonomy rank Isotypeⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Isotype`
Is Defined By	http://purl.uniprot.org/core/

Taxonomy rank Kingdomⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Kingdom`
Is Defined By	http://purl.uniprot.org/core/

Liquid Secondary Ionizationⁿⁱ

Class(es)

Mass_Measurement_Method
owl:Thing

URI	`http://purl.uniprot.org/core/LSIMS`
Is Defined By	http://purl.uniprot.org/core/

Matrix-Assisted Laser Desorptionⁿⁱ

Class(es)

Mass_Measurement_Method
owl:Thing

URI	`http://purl.uniprot.org/core/MALDI`
Is Defined By	http://purl.uniprot.org/core/
See Also	dbpedia:Matrix-assisted_laser_desorption_ionization

Mitochondrionⁿⁱ

Class(es)

owl:Thing
Organelle

URI	`http://purl.uniprot.org/core/Mitochondrion`
Is Defined By	http://purl.uniprot.org/core/

NMR Spectroscopyⁿⁱ

Class(es)

Structure_Determination_Method
owl:Thing

URI	`http://purl.uniprot.org/core/NMR_Spectroscopy`
Is Defined By	http://purl.uniprot.org/core/
See Also	dbpedia:NMR

Neutron Diffractionⁿⁱ

Class(es)

Structure_Determination_Method
owl:Thing

URI	`http://purl.uniprot.org/core/Neutron_Diffraction`
Is Defined By	http://purl.uniprot.org/core/
See Also	dbpedia:Neutron_diffraction

Non-photosyntethic plastidⁿⁱ

Class(es)

owl:Thing
Organelle

URI	`http://purl.uniprot.org/core/Non-photosynthetic_plastid`
Is Defined By	http://purl.uniprot.org/core/

Nuleomorphⁿⁱ

Class(es)

owl:Thing
Organelle

URI	`http://purl.uniprot.org/core/Nucleomorph`
Is Defined By	http://purl.uniprot.org/core/

Taxonomy rank Orderⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Order`
Is Defined By	http://purl.uniprot.org/core/

Organellar chromatophoreⁿⁱ

Class(es)

owl:Thing
Organelle

URI	`http://purl.uniprot.org/core/Organellar_chromatophore`
Is Defined By	http://purl.uniprot.org/core/

Plasma Desorptionⁿⁱ

Class(es)

Mass_Measurement_Method
owl:Thing

URI	`http://purl.uniprot.org/core/PD`
Is Defined By	http://purl.uniprot.org/core/
Description

Taxonomy rank Paratypeⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Paratype`
Is Defined By	http://purl.uniprot.org/core/

Taxonomy rank Parvorderⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Parvorder`
Is Defined By	http://purl.uniprot.org/core/

Taxonomy rank Phylumⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Phylum`
Is Defined By	http://purl.uniprot.org/core/

Plastidⁿⁱ

Class(es)

owl:Thing
Organelle

URI	`http://purl.uniprot.org/core/Plastid`
Is Defined By	http://purl.uniprot.org/core/

Potentialⁿⁱ

Class(es)

Status
owl:Thing

URI	`http://purl.uniprot.org/core/Potential`
Is Defined By	http://purl.uniprot.org/core/
Description	indicates that there is some logical or conclusive evidence that the given annotation could apply. This non-experimental qualifier is often used to present results from protein sequence analysis software tools, which are only annotated if the result makes sense in the biological context of a given protein. A typical example is the annotation of N-glycosylation sites in secreted proteins

Predictedⁿⁱ

Class(es)

Protein_Existence
owl:Thing

URI	`http://purl.uniprot.org/core/Predicted_Existence`
Is Defined By	http://purl.uniprot.org/core/
Description	This is used for proteins without evidence at protein, transcript, or homology levels.

Predictionⁿⁱ

Class(es)

Structure_Determination_Method
owl:Thing

URI	`http://purl.uniprot.org/core/Prediction`
Is Defined By	http://purl.uniprot.org/core/

Probableⁿⁱ

Class(es)

Status
owl:Thing

URI	`http://purl.uniprot.org/core/Probable`
Is Defined By	http://purl.uniprot.org/core/
Description	The status ‘Probable’ indicates stronger evidence than the qualifier ‘Potential’. This qualifier implies that there must be at least some experimental evidence, which indicates, that the information is expected to be found in the natural environment of a protein.

Surface Enhanced Laser Desorption Ionizationⁿⁱ

Class(es)

Mass_Measurement_Method
owl:Thing

URI	`http://purl.uniprot.org/core/SELDI`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Speciesⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Species`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Species Groupⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Species_Group`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Species Subgroupⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Species_Subgroup`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Subclassⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Subclass`
Is Defined By	http://purl.uniprot.org/core/

Subcohortⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Subcohort`
Description	Taxonomy rank subcohort

Taxonomic rank Subfamilyⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Subfamily`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Subgenusⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Subgenus`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Subkingdomⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Subkingdom`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Suborderⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Suborder`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Subphylumⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Subphylum`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Subspeciesⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Subspecies`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Subtribeⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Subtribe`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Superclassⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Superclass`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Superfamilyⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Superfamily`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Superkingdomⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Superkingdom`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Superorderⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Superorder`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Superphylumⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Superphylum`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Tribeⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Tribe`
Is Defined By	http://purl.uniprot.org/core/

Uncertainⁿⁱ

Class(es)

Protein_Existence
owl:Thing

URI	`http://purl.uniprot.org/core/Uncertain_Existence`
Is Defined By	http://purl.uniprot.org/core/

Taxonomic rank Varietasⁿⁱ

Class(es)

owl:Thing
Rank

URI	`http://purl.uniprot.org/core/Varietas`
Is Defined By	http://purl.uniprot.org/core/

X-Ray Crystallographyⁿⁱ

Class(es)

Structure_Determination_Method
owl:Thing

URI	`http://purl.uniprot.org/core/X-Ray_Crystallography`
Is Defined By	http://purl.uniprot.org/core/
Description	A technique in crystallography in which the pattern produced by the diffraction of x-rays through the closely spaced lattice of atoms in a crystal is recorded and then analyzed to reveal the nature of that lattice.
See Also	dbpedia:X-ray_crystallography

URI	`http://purl.uniprot.org/core/certain`
Is Defined By	http://purl.uniprot.org/core/
Description	False if there is any uncertainty about a statement.
Domain(s)	Absorption^c
Range(s)	xsd:boolean^c

URI	`http://purl.uniprot.org/core/created`
Is Defined By	http://purl.uniprot.org/core/
Description	The date a resource was created.
Domain(s)	(Protein^c or Resource^c or Sequence^c)
Range(s)	xsd:date^c

URI	`http://purl.uniprot.org/core/date`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	(Attribution^c or Citation^c)

URI	`http://purl.uniprot.org/core/height`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	foaf:Image^c
Range(s)	xsd:int^c

URI	`http://purl.uniprot.org/core/identity`
Is Defined By	http://purl.uniprot.org/core/
Description	The level of sequence identity in a cluster.
Domain(s)	Cluster (UniRef)^c

URI	`http://purl.uniprot.org/core/implicit`
Is Defined By	http://purl.uniprot.org/core/
Description	True if existance of this resource can be inferred.
Domain(s)	Database (description of)^c
Range(s)	xsd:boolean^c

URI	`http://purl.uniprot.org/core/length`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Sequence^c
Range(s)	xsd:int^c

URI	`http://purl.uniprot.org/core/manual`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Attribution^c
Range(s)	xsd:boolean^c

URI	`http://purl.uniprot.org/core/mass`
Is Defined By	http://purl.uniprot.org/core/
Description	The predicted mass of a sequence in Daltons.
Domain(s)	Sequence^c
Range(s)	xsd:int^c

URI	`http://purl.uniprot.org/core/maximum`
Is Defined By	http://purl.uniprot.org/core/
Description	A maximum value.
Domain(s)	Absorption^c
Range(s)	xsd:float^c

URI	`http://purl.uniprot.org/core/md5Checksum`
Is Defined By	http://purl.uniprot.org/core/
Super-properties	checksum^dp
Domain(s)	Sequence^c
Range(s)	xsd:string^c

URI	`http://purl.uniprot.org/core/measuredError`
Is Defined By	http://purl.uniprot.org/core/
Description	The magnitude of the error of a value that was measured.
Domain(s)	Mass^c
Range(s)	xsd:float^c

URI	`http://purl.uniprot.org/core/measuredValue`
Is Defined By	http://purl.uniprot.org/core/
Description	A value that was measured.
Domain(s)	Mass^c
Range(s)	xsd:float^c

URI	`http://purl.uniprot.org/core/modified`
Is Defined By	http://purl.uniprot.org/core/
Description	The date a resource was last modified.
Domain(s)	(Cluster (UniRef)^c or Protein^c or Sequence^c)
Range(s)	xsd:date^c

URI	`http://purl.uniprot.org/core/negative`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Interaction^c
Range(s)	xsd:boolean^c

URI	`http://purl.uniprot.org/core/pages`
Is Defined By	http://purl.uniprot.org/core/
Description	The first and last page for a chapter or article.
Domain(s)	(Book Citation^c or Journal Citation^c)
Range(s)	xsd:string^c

URI	`http://purl.uniprot.org/core/partOfLineage`
Is Defined By	http://purl.uniprot.org/core/
Description	True for taxa that can appear as part of an organism's non abbreviated lineage. In the flatfile and XML views of an UniProt entry (as well as at INSDC) only these taxonomic nodes are shown.
Domain(s)	Taxon^c
Range(s)	xsd:boolean^c

URI	`http://purl.uniprot.org/core/pattern`
Is Defined By	http://purl.uniprot.org/core/
Description	A URL pattern, used to generate links by substituting an identifier.
Domain(s)	Database (description of)^c
Range(s)	xsd:string^c

URI	`http://purl.uniprot.org/core/place`
Is Defined By	http://purl.uniprot.org/core/
Description	The place where a publication was published. This usually includes a country name.
Domain(s)	(Book Citation^c or Thesis Citation^c)
Range(s)	xsd:string^c

URI	`http://purl.uniprot.org/core/resolution`
Is Defined By	http://purl.uniprot.org/core/
Description	The resolution of an experiment, in Angstrom.
Domain(s)	Structure Resource^c
Range(s)	xsd:float^c

UniProt RDF schema ontology

Metadata

Description

Table of Contents

Overview

Classes ↑

Absorptionc # Classes

Active Sitec # Classes

Activity Regulationc # Classes

Allergenc # Classes

Alternative Initiationc # Classes

Alternative Productsc # Classes

Alternative Promoter Usagec # Classes

Splice Variantc # Classes

Alternative Splicingc # Classes

Annotationc # Classes

Attributionc # Classes

Strandc # Classes

Binding Sitec # Classes

Biophysicochemical Propertyc # Classes

Biotechnologyc # Classes

Book Citationc # Classes

Calcium Bindingc # Classes

Catalytic Activityc # Classes

Catalytic Activity Annotationc # Classes

Cautionc # Classes

Cellular Componentc # Classes

Chainc # Classes

Citationc # Classes

Citation Statementc # Classes

Cluster (UniRef)c # Classes

Cofactorc # Classes

Coiled-Coilc # Classes

Compositionally Biased Regionc # Classes

Conceptc # Classes

Crosslinkc # Classes

DNAc # Classes

Database (description of)c # Classes

Developmental Stagec # Classes

Diseasec # Classes

Disease Annotationc # Classes

Disruption Phenotypec # Classes

Disulfide Bondc # Classes

Domainc # Classes

Domain Assignment Statementc # Classes

Domain Extentc # Classes

Electronic Citationc # Classes

Endpoint Statementc # Classes

Enzymec # Classes

Enzyme Regulationc # Classes

Erroneous Gene Model Predictionc # Classes

Erroneous Initiationc # Classes

Erroneous Terminationc # Classes

Erroneous Translationc # Classes

Experimental Informationc # Classes

External Sequencec # Classes

Family Membership Statementc # Classes

Frameshiftc # Classes

Functionc # Classes

Genec # Classes

Genomic DNAc # Classes

Genomic RNAc # Classes

Glycosylation Sitec # Classes

Helixc # Classes

Inductionc # Classes

Initiator Methioninec # Classes

Interactionc # Classes

INTRAMEMc # Classes

Journalc # Classes

Journal Citationc # Classes

Kineticsc # Classes

Known Sequencec # Classes

Lipid Bindingc # Classes

mRNAc # Classes

Mass Measurementc # Classes

Massc # Classes

Member Of Redudant Proteomec # Classes

Metal Ion Binding Sitec # Classes

Methodc # Classes

Modificationc # Classes

Absorption^c # Classes

Active Site^c # Classes

Activity Regulation^c # Classes

Allergen^c # Classes

Alternative Initiation^c # Classes

Alternative Products^c # Classes

Alternative Promoter Usage^c # Classes

Splice Variant^c # Classes

Alternative Splicing^c # Classes

Annotation^c # Classes

Attribution^c # Classes

Strand^c # Classes

Binding Site^c # Classes

Biophysicochemical Property^c # Classes

Biotechnology^c # Classes

Book Citation^c # Classes

Calcium Binding^c # Classes

Catalytic Activity^c # Classes

Catalytic Activity Annotation^c # Classes

Caution^c # Classes

Cellular Component^c # Classes

Chain^c # Classes

Citation^c # Classes

Citation Statement^c # Classes

Cluster (UniRef)^c # Classes

Cofactor^c # Classes

Coiled-Coil^c # Classes

Compositionally Biased Region^c # Classes

Concept^c # Classes

Crosslink^c # Classes

DNA^c # Classes

Database (description of)^c # Classes

Developmental Stage^c # Classes

Disease^c # Classes

Disease Annotation^c # Classes

Disruption Phenotype^c # Classes

Disulfide Bond^c # Classes

Domain^c # Classes

Domain Assignment Statement^c # Classes

Domain Extent^c # Classes

Electronic Citation^c # Classes

Endpoint Statement^c # Classes

Enzyme^c # Classes

Enzyme Regulation^c # Classes

Erroneous Gene Model Prediction^c # Classes

Erroneous Initiation^c # Classes

Erroneous Termination^c # Classes

Erroneous Translation^c # Classes

Experimental Information^c # Classes

External Sequence^c # Classes

Family Membership Statement^c # Classes

Frameshift^c # Classes

Function^c # Classes

Gene^c # Classes

Genomic DNA^c # Classes

Genomic RNA^c # Classes

Glycosylation Site^c # Classes

Helix^c # Classes

Induction^c # Classes

Initiator Methionine^c # Classes

Interaction^c # Classes

INTRAMEM^c # Classes

Journal^c # Classes

Journal Citation^c # Classes

Kinetics^c # Classes

Known Sequence^c # Classes

Lipid Binding^c # Classes

mRNA^c # Classes

Mass Measurement^c # Classes

Mass^c # Classes

Member Of Redudant Proteome^c # Classes

Metal Ion Binding Site^c # Classes

Method^c # Classes

Modification^c # Classes

Modified Residue^c # Classes

Modified Sequence^c # Classes

Molecule^c # Classes

Molecule Processing^c # Classes

Motif^c # Classes

Mutagenesis Site^c # Classes

URI	`http://purl.uniprot.org/core/scientificName`
Is Defined By	http://purl.uniprot.org/core/
Super-properties	name^dp
Domain(s)	Taxon^c
Range(s)	xsd:string^c

URI	`http://purl.uniprot.org/core/synonym`
Is Defined By	http://purl.uniprot.org/core/
Super-properties	name^dp
Domain(s)	Taxon^c
Range(s)	xsd:string^c

URI	`http://purl.uniprot.org/core/title`
Is Defined By	http://purl.uniprot.org/core/
Description	The title of a publication.
Domain(s)	Citation^c
Range(s)	xsd:string^c

URI	`http://purl.uniprot.org/core/version`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	(Protein^c or Sequence^c)
Range(s)	xsd:int^c

URI	`http://purl.uniprot.org/core/volume`
Is Defined By	http://purl.uniprot.org/core/
Description	The volume a publication is part of.
Domain(s)	(Book Citation^c or Journal Citation^c)

URI	`http://purl.uniprot.org/core/width`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	foaf:Image^c
Range(s)	xsd:int^c

URI	`http://purl.uniprot.org/core/xeno`
Is Defined By	http://purl.uniprot.org/core/
Domain(s)	Interaction^c
Range(s)	xsd:boolean^c

^c	Classes
^op	Object Properties
^fp	Functional Properties
^dp	Data Properties
^dp	Annotation Properties
^p	Properties
ⁿⁱ	Named Individuals