@prefix sh: <http://www.w3.org/ns/shacl#> . @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . [] a sh:ValidationReport ; sh:conforms true .
WARNING: An illegal reflective access operation has occurred WARNING: Illegal reflective access by com.google.inject.internal.cglib.core.$ReflectUtils$2 (file:/usr/lib/pellet/cli/target/pelletcli/lib/guice-4.0.jar) to method java.lang.ClassLoader.defineClass(java.lang.String,byte[],int,int,java.security.ProtectionDomain) WARNING: Please consider reporting this to the maintainers of com.google.inject.internal.cglib.core.$ReflectUtils$2 WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations WARNING: All illegal access operations will be denied in a future release [main] WARN org.semanticweb.owlapi.util.SAXParsers - http://www.oracle.com/xml/jaxp/properties/entityExpansionLimit not supported by parser type org.apache.xerces.jaxp.SAXParserImpl [main] WARN org.semanticweb.owlapi.util.SAXParsers - entityExpansionLimit not supported by parser type org.apache.xerces.jaxp.SAXParserImpl [main] WARN org.semanticweb.owlapi.util.SAXParsers - http://www.oracle.com/xml/jaxp/properties/entityExpansionLimit not supported by parser type org.apache.xerces.jaxp.SAXParserImpl [main] WARN org.semanticweb.owlapi.util.SAXParsers - entityExpansionLimit not supported by parser type org.apache.xerces.jaxp.SAXParserImpl [main] INFO org.semanticweb.owlapi.rdf.rdfxml.parser.OWLRDFConsumer - dumping remaining triples
There are 1 input files: /usr/local/archivo-data/semanticscience.org/ontology--sio--owl/2023.02.02-070636/ontology--sio--owl_type=parsed.ttl Start loading Feb 02, 2023 7:12:55 AM org.mindswap.pellet.jena.graph.loader.DefaultGraphLoader addUnsupportedFeature WARNING: Unsupported axiom: Ignoring triple with unknown property from OWL namespace: http://semanticscience.org/ontology/sio.owl @owl:versionIRI http://semanticscience.org/ontology/sio/v1.57/sio-release.owl Finished loading in 00:00:21.552 Input size: Classes = 1580, Properties = 251, Individuals = 2813 Expressivity: SRIQ(D) Start consistency check Finished consistency check in 00:00:00.333
@prefix dc: <http://purl.org/dc/elements/1.1/> . @prefix owl: <http://www.w3.org/2002/07/owl#> . @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . @prefix sh: <http://www.w3.org/ns/shacl#> . @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . [] a sh:ValidationReport ; sh:conforms false ; sh:result [ a sh:ValidationResult ; sh:focusNode <http://semanticscience.org/resource/SIO_001058> ;
<http://semanticscience.org/resource/SIO_000004> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc7e8db11 . <http://semanticscience.org/resource/SIO_000004> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc7e8db12 . <http://semanticscience.org/resource/SIO_000005> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc7e8db16 . <http://semanticscience.org/resource/SIO_000006> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc7e8db17 . <http://semanticscience.org/resource/SIO_000006> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc7e8db18 . <http://semanticscience.org/resource/SIO_000010> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc7e8db19 . <http://semanticscience.org/resource/SIO_000014> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc7e8db20 . <http://semanticscience.org/resource/SIO_000015> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc7e8db21 . <http://semanticscience.org/resource/SIO_000022> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc7e8db22 . <http://semanticscience.org/resource/SIO_000026> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc7e8db23 .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> . @prefix protege: <http://protege.stanford.edu/plugins/owl/protege#> . @prefix dc: <http://purl.org/dc/elements/1.1/> . @prefix dct: <http://purl.org/dc/terms/> . @prefix cito: <http://purl.org/spar/cito/> . @prefix vann: <http://purl.org/vocab/vann/> . @prefix ns0: <http://schema.org/> . @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . @prefix owl: <http://www.w3.org/2002/07/owl#> . @prefix ns1: <http://rdfs.org/ns/void#> .
{ "http-data": { "accessed": "2023.02.02; 07:12:38", "best-header": "application/rdf+xml", "content-length": "124797", "e-tag": "W/\"e4b196feb087a9cfaf6c6deecc7b01ffdc2efeed6daa392a532a4adf02e5b187\"", "lastModified": "" }, "logs": { "nir-header": "{'Server': 'nginx/1.21.6', 'Date': 'Thu, 02 Feb 2023 07:06:36 GMT', 'Content-Type': 'text/html', 'Content-Length': '169', 'Connection': 'keep-alive', 'Location': 'https://semanticscience.org/ontology/sio.owl'}",
<http://protege.stanford.edu/plugins/owl/protege#defaultLanguage> <http://purl.org/dc/elements/1.1/identifier> "protege#defaultLanguage" . <http://protege.stanford.edu/plugins/owl/protege#defaultLanguage> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#AnnotationProperty> . <http://purl.org/dc/elements/1.1/contributor> <http://purl.org/dc/elements/1.1/identifier> "contributor" . <http://purl.org/dc/elements/1.1/contributor> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#AnnotationProperty> . <http://purl.org/dc/elements/1.1/creator> <http://purl.org/dc/elements/1.1/identifier> "creator" . <http://purl.org/dc/elements/1.1/creator> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#AnnotationProperty> . <http://purl.org/dc/elements/1.1/description> <http://purl.org/dc/elements/1.1/identifier> "description" . <http://purl.org/dc/elements/1.1/description> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#AnnotationProperty> . <http://purl.org/dc/terms/alternative> <http://purl.org/dc/elements/1.1/identifier> "alternative" . <http://purl.org/dc/terms/alternative> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#AnnotationProperty> .
The semanticscience integrated ontology (SIO) provides a simple, integrated ontology (types, relations) for objects, processes and their attributes. This project provides foundational support for the Bio2RDF (http://bio2rdf.org) and SADI (http://sadiframework.org) projects. website: http://semanticscience.org email: sio-ontology@googlegroups.com mailing list: http://groups.google.com/group/sio-ontology
Semanticscience Integrated Ontology (SIO)
## All DBpedia Archivo ontologies from semanticscience.org domain Each artifact in this group deals as the archive for snapshots of one ontology of the [DBpedia Archivo](https://databus.dbpedia.org/ontologies) - A Web-Scale Interface for Ontology Archiving under Consumer-oriented Aspects. Find out more at [http://archivo.dbpedia.org](http://archivo.dbpedia.org). The description for the individual files in the artifact can be found [here](http://dev.dbpedia.org/DBpedia_Archvio#files).
## DBpedia Archivo Ontology Snapshot | Attribute | Value | | - | - | | Ontology URI | <http://semanticscience.org/ontology/sio.owl> | Archivo Ontology Factsheet| [Link](http://archivo.dbpedia.org/info?o=http://semanticscience.org/ontology/sio.owl) | Snapshot File URL | <https://raw.githubusercontent.com/micheldumontier/semanticscience/master/ontology/sio/release/sio-release.owl> | Snapshot OWL Version IRI | <http://semanticscience.org/ontology/sio/v1.57/sio-release.owl> | Snapshot Time | 2023-02-02 07:06:36 The [DBpedia Archivo Databus agent](https://databus.dbpedia.org/ontologies) generates only basic, static documentation for the archived snapshots of the ontologies. ## Ontology Metadata DBpedia Archivo extracts metadata from the ontology for well known properties (e.g. dct:description). This subsection shows the content of every property individually using a separate heading. ### dct:description The semanticscience integrated ontology (SIO) provides a simple, integrated ontology (types, relations) for objects, processes and their attributes. This project provides foundational support for the Bio2RDF (http://bio2rdf.org) and SADI (http://sadiframework.org) projects. website: http://semanticscience.org email: sio-ontology@googlegroups.com mailing list: http://groups.google.com/group/sio-ontology
<?xml version="1.0" encoding="utf-8"?> <rdf:RDF xmlns:cito="http://purl.org/spar/cito/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dct="http://purl.org/dc/terms/" xmlns:ns0="http://schema.org/" xmlns:ns1="http://rdfs.org/ns/void#" xmlns:ns2="http://www.w3.org/2004/02/skos/core#" xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:protege="http://protege.stanford.edu/plugins/owl/protege#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:sio="http://semanticscience.org/resource/" xmlns:vann="http://purl.org/vocab/vann/" xmlns:xsd="http://www.w3.org/2001/XMLSchema#"> <rdf:Description rdf:about="http://semanticscience.org/ontology/sio.owl"> <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Ontology"/> </rdf:Description> <rdf:Description rdf:about="http://semanticscience.org/ontology/sio.owl"> <protege:defaultLanguage>en</protege:defaultLanguage> </rdf:Description> <rdf:Description rdf:about="http://semanticscience.org/ontology/sio.owl"> <dc:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Contributors are those that engage in discussions in the context of SIO (in alphabetical order):
Error: Unable to access jarfile /data/home/dstreitmatter/profilechecker-1.1.0.jar
<?xml version="1.0" encoding="UTF-8"?> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:protege="http://protege.stanford.edu/plugins/owl/protege#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dct="http://purl.org/dc/terms/" xmlns:cito="http://purl.org/spar/cito/" xmlns:vann="http://purl.org/vocab/vann/" xmlns:ns0="http://schema.org/" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:owl="http://www.w3.org/2002/07/owl#"
There are 1 input files: /usr/local/archivo-data/semanticscience.org/ontology--sio--owl/2023.02.02-070636/ontology--sio--owl_type=parsed.ttl Start loading Feb 02, 2023 7:13:18 AM org.mindswap.pellet.jena.graph.loader.DefaultGraphLoader addUnsupportedFeature WARNING: Unsupported axiom: Ignoring triple with unknown property from OWL namespace: http://semanticscience.org/ontology/sio.owl @owl:versionIRI http://semanticscience.org/ontology/sio/v1.57/sio-release.owl Finished loading in 00:00:21.657 Input size: Classes = 1580, Properties = 251, Individuals = 2813 Expressivity: SRIQ(D) Start consistency check Finished consistency check in 00:00:00.308
<http://semanticscience.org/ontology/sio.owl> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Ontology> . <http://semanticscience.org/ontology/sio.owl> <http://protege.stanford.edu/plugins/owl/protege#defaultLanguage> "en" . <http://semanticscience.org/ontology/sio.owl> <http://purl.org/dc/elements/1.1/contributor> "Contributors are those that engage in discussions in the context of SIO (in alphabetical order):\nsivaram arabandi\nchristopher baker\njoachim baran\njerven bolleman\nmatthew brush\nalison callahan\nleonid chepelev\nkevin cohen\nmelanie courtot\ngeraint duck\nlaura furlong\nelisa kendall\ntatsuya kushida\nluke mccarthy\njim mccusker\njose miguel cruz-toledo\nchris mungall\nrobert hoehndorf\nsimon jupp\njin-dong kim\ndana klassen\nthomas luetteke\njames malone\nchris mungall\ndavid osumi-sutherland\ntazro ohta\nnuria queralt\nstephen reed\nalexandre riazanov\nmatthias samwald\nrobert stevens\nmark wilkinson\nkarin verspoor\nnatalia villanueva-rosales"^^<http://www.w3.org/2001/XMLSchema#string> . <http://semanticscience.org/ontology/sio.owl> <http://purl.org/dc/elements/1.1/creator> "Michel Dumontier"@en . <http://semanticscience.org/ontology/sio.owl> <http://purl.org/dc/terms/creator> "http://orcid.org/0000-0003-4727-9435"^^<http://www.w3.org/2001/XMLSchema#anyURI> . <http://semanticscience.org/ontology/sio.owl> <http://purl.org/dc/terms/description> "The semanticscience integrated ontology (SIO) provides a simple, integrated ontology (types, relations) for objects, processes and their attributes.\n\nThis project provides foundational support for the Bio2RDF (http://bio2rdf.org) and SADI (http://sadiframework.org) projects. \n\nwebsite: http://semanticscience.org\nemail: sio-ontology@googlegroups.com\nmailing list: http://groups.google.com/group/sio-ontology\n"@en . <http://semanticscience.org/ontology/sio.owl> <http://purl.org/dc/terms/issued> "2010-03-29"^^<http://www.w3.org/2001/XMLSchema#date> . <http://semanticscience.org/ontology/sio.owl> <http://purl.org/dc/terms/license> <http://creativecommons.org/licenses/by/4.0/> . <http://semanticscience.org/ontology/sio.owl> <http://purl.org/dc/terms/rights> "free to use,share,modify. modify with attribution [http://creativecommons.org/licenses/by/4.0/]."^^<http://www.w3.org/2001/XMLSchema#string> . <http://semanticscience.org/ontology/sio.owl> <http://purl.org/dc/terms/title> "Semanticscience Integrated Ontology (SIO)"@en .
Metadata created by the DBpedia Databus Maven Plugin: https://github.com/dbpedia/databus-maven-plugin (Version 1.3-SNAPSHOT) The DataID ontology is a metadata omnibus, which can be extended to be interoperable with all metadata formats Note that the metadata (the dataid.ttl file) is always CC-0, the files are licensed individually Metadata created by https://yum-yab.github.io/webid.ttl#onto
DataID metadata for semanticscience.org/ontology--sio--owl
<?xml version="1.0" encoding="UTF-8"?> Semanticscience Integrated Ontology (SIO) Semanticscience Integrated Ontology (SIO) $(document).ready( function () { jQuery(".markdown").each(function(el){ jQuery(this).after(marked(jQuery(this).text())).remove()}); var list = $('a[name=" https://raw.githubusercontent.com/micheldumontier/semanticscience/master/ontology/sio/release/sio-release.owl "]'); if (list.size() != 0) {
<http://semanticscience.org/resource/SIO_000004> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc906bb11 . <http://semanticscience.org/resource/SIO_000004> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc906bb12 . <http://semanticscience.org/resource/SIO_000005> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc906bb16 . <http://semanticscience.org/resource/SIO_000006> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc906bb17 . <http://semanticscience.org/resource/SIO_000006> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc906bb18 . <http://semanticscience.org/resource/SIO_000010> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc906bb19 . <http://semanticscience.org/resource/SIO_000014> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc906bb20 . <http://semanticscience.org/resource/SIO_000015> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc906bb21 . <http://semanticscience.org/resource/SIO_000022> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc906bb22 . <http://semanticscience.org/resource/SIO_000026> <http://www.w3.org/2000/01/rdf-schema#subClassOf> _:arc906bb23 .