WARNING: An illegal reflective access operation has occurred WARNING: Illegal reflective access by com.google.inject.internal.cglib.core.$ReflectUtils$1 (file:/usr/local/src/webapp/archivo/archivo/helpingBinaries/profilechecker-1.1.0.jar) to method java.lang.ClassLoader.defineClass(java.lang.String,byte[],int,int,java.security.ProtectionDomain) WARNING: Please consider reporting this to the maintainers of com.google.inject.internal.cglib.core.$ReflectUtils$1 WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations WARNING: All illegal access operations will be denied in a future release [main] INFO org.semanticweb.owlapi.rdf.rdfxml.parser.AbstractState - Notice: root element does not have an xml:base. Relative IRIs will be resolved against https://w3id.org/lbd/aec3po/check_method [main] INFO org.semanticweb.owlapi.rdf.rdfxml.parser.AbstractState - Notice: root element does not have an xml:base. Relative IRIs will be resolved against https://w3id.org/lbd/aec3po/statement [main] INFO org.semanticweb.owlapi.rdf.rdfxml.parser.AbstractState - Notice: root element does not have an xml:base. Relative IRIs will be resolved against https://w3id.org/lbd/aec3po/document [main] INFO org.semanticweb.owlapi.rdf.rdfxml.parser.AbstractState - Notice: root element does not have an xml:base. Relative IRIs will be resolved against https://w3id.org/lbd/aec3po/compliance_verification_report [main] ERROR org.semanticweb.owlapi.rdf.rdfxml.parser.OWLRDFConsumer - Entity not properly recognized, missing triples in input? http://org.semanticweb.owlapi/error#Error1 for type Class [main] INFO org.semanticweb.owlapi.rdf.rdfxml.parser.OWLRDFConsumer - Unparsed triple: _:genid-nodeid-nc78f1c3247c14c5e944ec41edbd518fcb3 -> http://www.w3.org/2002/07/owl#onProperty -> https://w3id.org/lbd/aec3po/hasSeverity [main] INFO org.semanticweb.owlapi.rdf.rdfxml.parser.OWLRDFConsumer - Unparsed triple: http://www.w3.org/2002/07/owl#eqivalentProperty -> https://w3id.org/lbd/aec3po/hasUnit -> http://qudt.org/schema/qudt/hasValue [main] INFO org.semanticweb.owlapi.rdf.rdfxml.parser.AbstractState - Notice: root element does not have an xml:base. Relative IRIs will be resolved against https://w3id.org/lbd/aec3po/checking_act [main] INFO org.semanticweb.owlapi.rdf.rdfxml.parser.AbstractState - Notice: root element does not have an xml:base. Relative IRIs will be resolved against https://w3id.org/lbd/aec3po/conformance_report [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - OWLOntologyManagerImpl.checkForOntologyIDChange() existing:Ontology(OntologyID(OntologyIRI() VersionIRI())) [Axioms: 59 Logical Axioms: 14] First 20 axioms: {DataPropertyRange( xsd:boolean) Declaration(ObjectProperty()) Declaration(Class()) Declaration(Class()) Declaration(ObjectProperty()) Declaration(DataProperty()) Declaration(DataProperty()) Declaration(Class()) Declaration(NamedIndividual()) Declaration(NamedIndividual()) Declaration(NamedIndividual()) Declaration(ObjectProperty()) ClassAssertion( ) ClassAssertion( ) ClassAssertion( ) ObjectPropertyDomain( ) ObjectPropertyDomain( ) ObjectPropertyDomain( ) DataPropertyDomain( ) DataPropertyDomain( ) } [main] ERROR uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl - OWLOntologyManagerImpl.checkForOntologyIDChange() new:Ontology(OntologyID(Anonymous-14)) [Axioms: 2 Logical Axioms: 0] First 20 axioms: {Declaration(Class()) Declaration(Class()) } Exception in thread "main" org.semanticweb.owlapi.model.UnloadableImportException: Could not load imported ontology: Cause: Ontology already exists. OntologyID(OntologyIRI() VersionIRI()) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.makeLoadImportRequest(OWLOntologyManagerImpl.java:1682) at org.semanticweb.owlapi.rdf.rdfxml.parser.TripleHandlers$TPImportsHandler.handleTriple(TripleHandlers.java:1440) at org.semanticweb.owlapi.rdf.rdfxml.parser.TripleHandlers$HandlerAccessor.handleStreaming(TripleHandlers.java:262) at org.semanticweb.owlapi.rdf.rdfxml.parser.OWLRDFConsumer.statementWithResourceValue(OWLRDFConsumer.java:1459) at org.semanticweb.owlapi.rdf.turtle.parser.OWLRDFConsumerAdapter.handleTriple(OWLRDFConsumerAdapter.java:53) at org.semanticweb.owlapi.rdf.turtle.parser.TurtleParser.parseObject(TurtleParser.java:581) at org.semanticweb.owlapi.rdf.turtle.parser.TurtleParser.parseObjectList(TurtleParser.java:535) at org.semanticweb.owlapi.rdf.turtle.parser.TurtleParser.parsePredicateObjectList(TurtleParser.java:459) at org.semanticweb.owlapi.rdf.turtle.parser.TurtleParser.parseTriples(TurtleParser.java:331) at org.semanticweb.owlapi.rdf.turtle.parser.TurtleParser.parseStatement(TurtleParser.java:320) at org.semanticweb.owlapi.rdf.turtle.parser.TurtleParser.parseDocument(TurtleParser.java:253) at org.semanticweb.owlapi.rdf.turtle.parser.TurtleOntologyParser.parse(TurtleOntologyParser.java:54) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyFactoryImpl.loadOWLOntology(OWLOntologyFactoryImpl.java:188) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.load(OWLOntologyManagerImpl.java:1072) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.loadOntology(OWLOntologyManagerImpl.java:1033) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.loadOntologyFromOntologyDocument(OWLOntologyManagerImpl.java:973) at no.s11.owlapi.ProfileChecker.loadOntology(ProfileChecker.java:152) at no.s11.owlapi.ProfileChecker.checkOntology(ProfileChecker.java:81) at no.s11.owlapi.ProfileChecker.check(ProfileChecker.java:76) at no.s11.owlapi.ProfileChecker.main(ProfileChecker.java:177) Caused by: org.semanticweb.owlapi.model.OWLOntologyAlreadyExistsException: Ontology already exists. OntologyID(OntologyIRI() VersionIRI()) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.load(OWLOntologyManagerImpl.java:1085) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.loadOntology(OWLOntologyManagerImpl.java:1033) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.loadOntology(OWLOntologyManagerImpl.java:930) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.loadImports(OWLOntologyManagerImpl.java:1635) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.makeLoadImportRequest(OWLOntologyManagerImpl.java:1675) ... 19 more Caused by: org.semanticweb.owlapi.model.OWLOntologyRenameException: Could not rename ontology. An ontology with this ID already exists: OntologyID(OntologyIRI() VersionIRI()) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.checkForOntologyIDChange(OWLOntologyManagerImpl.java:729) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.enactChangeApplication(OWLOntologyManagerImpl.java:587) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.actuallyApply(OWLOntologyManagerImpl.java:635) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.applyChangesAndGetDetails(OWLOntologyManagerImpl.java:604) at org.semanticweb.owlapi.model.HasApplyChanges.applyChanges(HasApplyChanges.java:37) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.applyChange(OWLOntologyManagerImpl.java:683) at org.semanticweb.owlapi.model.OWLOntology.applyChange(OWLOntology.java:90) at uk.ac.manchester.cs.owl.owlapi.concurrent.ConcurrentOWLOntologyImpl.applyChange(ConcurrentOWLOntologyImpl.java:2342) at org.semanticweb.owlapi.rdf.rdfxml.parser.TripleHandlers$TypeOntologyHandler.handleTriple(TripleHandlers.java:2699) at org.semanticweb.owlapi.rdf.rdfxml.parser.TripleHandlers$HandlerAccessor.handleStreaming(TripleHandlers.java:245) at org.semanticweb.owlapi.rdf.rdfxml.parser.OWLRDFConsumer.statementWithResourceValue(OWLRDFConsumer.java:1453) at org.semanticweb.owlapi.rdf.rdfxml.parser.RDFParser.statementWithResourceValue(RDFParser.java:380) at org.semanticweb.owlapi.rdf.rdfxml.parser.NodeElement.startElement(StartRDF.java:332) at org.semanticweb.owlapi.rdf.rdfxml.parser.ResourceOrLiteralElement.startElement(StartRDF.java:542) at org.semanticweb.owlapi.rdf.rdfxml.parser.RDFParser.startElement(RDFParser.java:216) at java.xml/com.sun.org.apache.xerces.internal.parsers.AbstractSAXParser.startElement(AbstractSAXParser.java:510) at java.xml/com.sun.org.apache.xerces.internal.impl.XMLNSDocumentScannerImpl.scanStartElement(XMLNSDocumentScannerImpl.java:374) at java.xml/com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl$FragmentContentDriver.next(XMLDocumentFragmentScannerImpl.java:2710) at java.xml/com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(XMLDocumentScannerImpl.java:605) at java.xml/com.sun.org.apache.xerces.internal.impl.XMLNSDocumentScannerImpl.next(XMLNSDocumentScannerImpl.java:112) at java.xml/com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(XMLDocumentFragmentScannerImpl.java:534) at java.xml/com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:888) at java.xml/com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:824) at java.xml/com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(XMLParser.java:141) at java.xml/com.sun.org.apache.xerces.internal.parsers.AbstractSAXParser.parse(AbstractSAXParser.java:1216) at java.xml/com.sun.org.apache.xerces.internal.jaxp.SAXParserImpl$JAXPSAXParser.parse(SAXParserImpl.java:635) at java.xml/com.sun.org.apache.xerces.internal.jaxp.SAXParserImpl.parse(SAXParserImpl.java:324) at org.semanticweb.owlapi.rdf.rdfxml.parser.RDFParser.parse(RDFParser.java:158) at org.semanticweb.owlapi.rdf.rdfxml.parser.RDFXMLParser.parse(RDFXMLParser.java:60) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyFactoryImpl.loadOWLOntology(OWLOntologyFactoryImpl.java:188) at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.load(OWLOntologyManagerImpl.java:1072) ... 23 more