MedRed ontology: clinical data acquisition model

Classes

Arm
ArmList
CaseReportForm
Choice
ChoiceList
EventList
Information
Instrument
InstrumentList
Item
ItemList
LongitudinalStudy
Observation
Operation
Question
Questionnaire
Section
Study
StudyEvent

Arm^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#Arm

is defined by: http://w3id.org/medred/medred#

An Arm is branching of a study that corresponds to a particular set of conditions, typically used to compare different behaviours, patterns or steps within the same study. Different Arms typically will have different sets of Instruments applied over time.

has super-classes: plan
is in range of: isEventOfArm^op
is disjoint with: Instrument^c

ArmList^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#ArmList

is defined by: http://w3id.org/medred/medred#

A ArmList is an ordered sequence of Arms, for a given study.

has super-classes: list^c
is in range of: hasArms^op

CaseReportForm^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#CaseReportForm

is defined by: http://w3id.org/medred/medred#

A CaseReportForm is a tool used for a clinical study to collect data from each participating subject

has super-classes: Instrument^c

Choice^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#Choice

is defined by: http://w3id.org/medred/medred#

Each Choice corresponds to a possible answer to a given Question

is in domain of: hasValue^dp

ChoiceList^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#ChoiceList

is defined by: http://w3id.org/medred/medred#

The ChoiceList corresponds to a list of Choice items for a given Question

is equivalent to: inverse hasChoices^op some Question^c
has super-classes: list^c
is in range of: hasChoices^op

EventList^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#EventList

is defined by: http://w3id.org/medred/medred#

An EventList is an ordered list of Event elements for a study that is carried out over a long period of time.

has super-classes: list^c
is in range of: includesEvents^op

Information^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#Information

is defined by: http://w3id.org/medred/medred#

Information corresponds to an instrument item that holds an information for the subject

has super-classes: Item^c

Instrument^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#Instrument

is defined by: http://w3id.org/medred/medred#

An Instrument represents a data acquisition tool for a medical study, e.g. a questionnaire, survey, assessment, etc.

has super-classes: instrument^c; plan
has sub-classes: CaseReportForm^c, Questionnaire^c
is in range of: includesInstrument^op, isItemofInstrument^op
is disjoint with: Arm^c, Observation^c

InstrumentList^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#InstrumentList

is defined by: http://w3id.org/medred/medred#

An InstrumentList is an ordered sequence of Instruments, for a given study.

has super-classes: list^c
is in range of: hasInstruments^op

Item^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#Item

is defined by: http://w3id.org/medred/medred#

An Item is a step of an Instrument

has super-classes: step; title^dp some string
has sub-classes: Information^c, Operation^c, Question^c, Section^c
is in domain of: isItemofInstrument^op, isItemofSection^op, validationShape^op

ItemList^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#ItemList

is defined by: http://w3id.org/medred/medred#

The ItemList is a list of Item elements

has super-classes: list^c
is in range of: items^op

LongitudinalStudy^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#LongitudinalStudy

is defined by: http://w3id.org/medred/medred#

A LongitudinalStudy is a study that invloves the repeated observation of data and variables over a period of time

has super-classes: Study^c

Observation^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#Observation

is defined by: http://w3id.org/medred/medred#

An Observation is a clinical data element corresponding to an Item in the scope of an Instrument. Observations may include answers to questions, recordings related to a variable, computations effectuated, etc.

has super-classes: entity
is in domain of: dataValue^dp
is disjoint with: Instrument^c

Operation^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#Operation

is defined by: http://w3id.org/medred/medred#

An Operation is an Instrument item that results of a computation, or generated form other items

has super-classes: Item^c
is in domain of: calculation^dp

Question^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#Question

is defined by: http://w3id.org/medred/medred#

A Question is an Instrument item consisting of an inquiry or query to a subject

has super-classes: question^c; Item^c
is in domain of: hasChoices^op

Questionnaire^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#Questionnaire

is defined by: http://w3id.org/medred/medred#

A Questionnaire is an Instrument that consists fo different questions made to the subject

has super-classes: Instrument^c

Section^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#Section

is defined by: http://w3id.org/medred/medred#

A Section is an Instrument item that regroups a subset of Items

has super-classes: multi step; Item^c
is in range of: isItemofSection^op

Study^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#Study

is defined by: http://w3id.org/medred/medred#

A Study is a medical research investigation composed of several instruments

has super-classes: study^c; entity
has sub-classes: LongitudinalStudy^c
is in domain of: hasArms^op, hasInstruments^op, studyName^dp
is in range of: includedInStudy^op

StudyEvent^c back to ToC or Class ToC

IRI: http://w3id.org/medred/medred#StudyEvent

is defined by: http://w3id.org/medred/medred#

A StudyEvent is a planned event within a study (e.g. longitudinal), which will occur at a given time point, and will include a subset of the planned instruments.

has super-classes: entity
is in domain of: includesInstrument^op, isEventOfArm^op

dataType^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#dataType

is defined by: http://w3id.org/medred/medred#

The dataType estalbishes a relationship between a Variable and the datatype of its data item

has super-properties: top object property
has domain: variable
has range: datatype^c

hasArms^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#hasArms

is defined by: http://w3id.org/medred/medred#

A relation between a Study and a list of its different Arms

has domain: Study^c
has range: ArmList^c

hasChoices^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#hasChoices

is defined by: http://w3id.org/medred/medred#

A relation between an Instrument question, and the list of possible Choice elements

has domain: Question^c
has range: ChoiceList^c

hasInstruments^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#hasInstruments

is defined by: http://w3id.org/medred/medred#

The instrument establishes a relationship between a Study and a list of Instruments

has domain: Study^c
has range: InstrumentList^c

includedInStudy^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#includedInStudy

is defined by: http://w3id.org/medred/medred#

It establishes a relationship between an Arm or Instrument, and a Study

has domain: Arm^c or Instrument^c
has range: Study^c

includesEvents^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#includesEvents

is defined by: http://w3id.org/medred/medred#

A relation between an Arm or Study, and the list of its events

has domain: Arm^c or Study^c
has range: EventList^c

includesInstrument^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#includesInstrument

is defined by: http://w3id.org/medred/medred#

A relation between an StudyEvent, and an Instrument it includes

has domain: StudyEvent^c
has range: Instrument^c

isEventOfArm^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#isEventOfArm

is defined by: http://w3id.org/medred/medred#

It establishes a relationship between a StudyEvent, and an Arm

has domain: StudyEvent^c
has range: Arm^c

isItemofInstrument^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#isItemOfInstrument

is defined by: http://w3id.org/medred/medred#

It establishes a relationship between an Item and an Instrument

has super-properties: is step of plan
has domain: Item^c
has range: Instrument^c

isItemofSection^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#isItemOfSection

is defined by: http://w3id.org/medred/medred#

It establishes a relationship between an Item and a Section

has super-properties: is step of plan
has domain: Item^c
has range: Section^c

items^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#items

is defined by: http://w3id.org/medred/medred#

The items property represents a relationship between an Instrument and its constitutent ItemList

has domain: Instrument^c or Item^c
has range: ItemList^c

validationShape^op back to ToC or Object Property ToC

IRI: http://w3id.org/medred/medred#validationShape

is defined by: http://w3id.org/medred/medred#

It establishes a relationship between an Item, and a PropertyShape, which defines the type of validation expected for the Observations made for the Item.

has domain: Item^c
has range: property shape^c

Data Properties

calculation
dataValue
hasValue
studyName
varName

calculation^dp back to ToC or Data Property ToC

IRI: http://w3id.org/medred/medred#calculation

is defined by: http://w3id.org/medred/medred#

It indicates the definition of a calculation or a computation on an Operation item, over input variables.

has domain: Operation^c
has range: literal

dataValue^dp back to ToC or Data Property ToC

IRI: http://w3id.org/medred/medred#dataValue

is defined by: http://w3id.org/medred/medred#

It establishes a value of a data element related to a given Observation

has domain: Observation^c
has range: literal

hasValue^dp back to ToC or Data Property ToC

IRI: http://w3id.org/medred/medred#hasValue

is defined by: http://w3id.org/medred/medred#

It establishes a value for a given Choice element.

has domain: Choice^c
has range: literal

studyName^dp back to ToC or Data Property ToC

IRI: http://w3id.org/medred/medred#studyName

is defined by: http://w3id.org/medred/medred#

It establishes a value for the name of the study

has super-properties: title^dp
has domain: Study^c
has range: string

varName^dp back to ToC or Data Property ToC

IRI: http://w3id.org/medred/medred#varName

is defined by: http://w3id.org/medred/medred#

It establishes a value for the name of a Variable

has domain: variable
has range: string

This HTML document was obtained by processing the OWL ontology source code through LODE, Live OWL Documentation Environment, developed by Silvio Peroni.

MedRed ontology: clinical data acquisition model

Abstract

Table of Content

Classes

Armc back to ToC or Class ToC

ArmListc back to ToC or Class ToC

CaseReportFormc back to ToC or Class ToC

Choicec back to ToC or Class ToC

ChoiceListc back to ToC or Class ToC

EventListc back to ToC or Class ToC

Informationc back to ToC or Class ToC

Instrumentc back to ToC or Class ToC

InstrumentListc back to ToC or Class ToC

Itemc back to ToC or Class ToC

ItemListc back to ToC or Class ToC

LongitudinalStudyc back to ToC or Class ToC

Observationc back to ToC or Class ToC

Operationc back to ToC or Class ToC

Questionc back to ToC or Class ToC

Questionnairec back to ToC or Class ToC

Sectionc back to ToC or Class ToC

Studyc back to ToC or Class ToC

StudyEventc back to ToC or Class ToC

Object Properties

dataTypeop back to ToC or Object Property ToC

hasArmsop back to ToC or Object Property ToC

hasChoicesop back to ToC or Object Property ToC

hasInstrumentsop back to ToC or Object Property ToC

includedInStudyop back to ToC or Object Property ToC

includesEventsop back to ToC or Object Property ToC

includesInstrumentop back to ToC or Object Property ToC

isEventOfArmop back to ToC or Object Property ToC

isItemofInstrumentop back to ToC or Object Property ToC

isItemofSectionop back to ToC or Object Property ToC

itemsop back to ToC or Object Property ToC

validationShapeop back to ToC or Object Property ToC